CSPI07G17580 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G17580
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 15915156 .. 15915515 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCGACTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGCCCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACAAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAATATTGGGAGTGAAGTTATTTCTAAGGATCACGTAGTTAATTTGAAGGATGTTGGAAGAATCGATGTTTCTCGTAGTGGAATAAATAATCGAAAGATCAAAGATGGTGGTAAAAATGGTGTAAAGGAGCCAAGGGAGAATTGTTGGATACAATATCAAAATTGGGTTAATGAGCAATGA

mRNA sequence

ATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCGACTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGCCCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACAAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAATATTGGGAGTGAAGTTATTTCTAAGGATCACGTAGTTAATTTGAAGGATGTTGGAAGAATCGATGTTTCTCGTAGTGGAATAAATAATCGAAAGATCAAAGATGGTGGTAAAAATGGTGTAAAGGAGCCAAGGGAGAATTGTTGGATACAATATCAAAATTGGGTTAATGAGCAATGA

Coding sequence (CDS)

ATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCGACTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGCCCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACAAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAATATTGGGAGTGAAGTTATTTCTAAGGATCACGTAGTTAATTTGAAGGATGTTGGAAGAATCGATGTTTCTCGTAGTGGAATAAATAATCGAAAGATCAAAGATGGTGGTAAAAATGGTGTAAAGGAGCCAAGGGAGAATTGTTGGATACAATATCAAAATTGGGTTAATGAGCAATGA
Homology
[Close]
BLAST of CSPI07G17580 vs. TrEMBL
Match: A0A0A0KAY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398130 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-35
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 1 

Query: 1  MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIK 60
          MMDHLDQVVLEFLQARKIDTTS IETTNPPELASSIAPVKFEVPINAGD+GLVFGFGKIK
Sbjct: 13 MMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAGDEGLVFGFGKIK 72

Query: 61 NIGSEVISKDHVVNLKDVGRIDVS 85
          NIGSEVI KDHVVNLK+VGRIDVS
Sbjct: 73 NIGSEVIYKDHVVNLKNVGRIDVS 96

[Close]
BLAST of CSPI07G17580 vs. NCBI nr
Match: gi|700189718|gb|KGN44951.1| (hypothetical protein Csa_7G398130 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-35
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 1 

Query: 1  MMDHLDQVVLEFLQARKIDTTSTIETTNPPELASSIAPVKFEVPINAGDKGLVFGFGKIK 60
          MMDHLDQVVLEFLQARKIDTTS IETTNPPELASSIAPVKFEVPINAGD+GLVFGFGKIK
Sbjct: 13 MMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAGDEGLVFGFGKIK 72

Query: 61 NIGSEVISKDHVVNLKDVGRIDVS 85
          NIGSEVI KDHVVNLK+VGRIDVS
Sbjct: 73 NIGSEVIYKDHVVNLKNVGRIDVS 96

The following BLAST results are available for this feature:
BLAST of CSPI07G17580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G17580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAY1_CUCSA1.0e-3595.24Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398130 PE=4 SV=1[more]
BLAST of CSPI07G17580 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G17580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189718|gb|KGN44951.1|1.4e-3595.24hypothetical protein Csa_7G398130 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G17580.1CSPI07G17580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G17580Csa7G398130Cucumber (Chinese Long) v2cpicuB354
CSPI07G17580MELO3C015990Melon (DHL92) v3.5.1cpimeB540
CSPI07G17580MELO3C015990.2Melon (DHL92) v3.6.1cpimedB525
CSPI07G17580CsaV3_7G029380Cucumber (Chinese Long) v3cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G17580Cucumber (Chinese Long) v3cpicucB402
CSPI07G17580Watermelon (97103) v2cpiwmbB541
CSPI07G17580Watermelon (97103) v2cpiwmbB564
CSPI07G17580Watermelon (97103) v2cpiwmbB590
CSPI07G17580Watermelon (97103) v2cpiwmbB598
CSPI07G17580Wax gourdcpiwgoB658
CSPI07G17580Wax gourdcpiwgoB666
CSPI07G17580Wax gourdcpiwgoB703
CSPI07G17580Cucurbita maxima (Rimu)cmacpiB934
CSPI07G17580Wild cucumber (PI 183967)cpicpiB167
CSPI07G17580Cucumber (Gy14) v1cgycpiB106
CSPI07G17580Cucumber (Gy14) v1cgycpiB325
CSPI07G17580Cucurbita maxima (Rimu)cmacpiB392
CSPI07G17580Cucurbita moschata (Rifu)cmocpiB381
CSPI07G17580Cucurbita moschata (Rifu)cmocpiB913
CSPI07G17580Cucumber (Chinese Long) v2cpicuB345
CSPI07G17580Melon (DHL92) v3.5.1cpimeB572
CSPI07G17580Watermelon (Charleston Gray)cpiwcgB547
CSPI07G17580Watermelon (Charleston Gray)cpiwcgB555
CSPI07G17580Watermelon (Charleston Gray)cpiwcgB560
CSPI07G17580Watermelon (97103) v1cpiwmB578
CSPI07G17580Watermelon (97103) v1cpiwmB587
CSPI07G17580Watermelon (97103) v1cpiwmB593
CSPI07G17580Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G17580Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G17580Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G17580Bottle gourd (USVL1VR-Ls)cpilsiB530
CSPI07G17580Melon (DHL92) v3.6.1cpimedB557
CSPI07G17580Cucumber (Gy14) v2cgybcpiB331
CSPI07G17580Silver-seed gourdcarcpiB0124
CSPI07G17580Silver-seed gourdcarcpiB0599
CSPI07G17580Silver-seed gourdcarcpiB0855