Csa7G394080 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G394080
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Glutaredoxin family protein; contains IPR011905 (Glutaredoxin-like, plant II), IPR012336 (Thioredoxin-like fold)
Location	Chr7 : 15011551 .. 15012252 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACAAGCTTTGATATTAGTTTTCTCTTGCGCACTTTTTCTTCTTAATATTTAAAACCTATATAACCGTATTTGGACCAAATTTGGTCAAATTTGGTCCAAAGAGGTTATAAGGTTTTAAACAAACTTGAAAGAAACCTTAGATATCAAGTGTACTTGTGTGTTGCTCGGCTTCATTTTATCTGCAAGGAAAACTCTATCATATTAAGAAGGCATGGATAAGGTTAAAAGGTTGGTTGCCGAGAGGAGTGTGGTCATCTTCAGCAAAAGCTCATGCTGCCTATCATATGCAGTTAACATTCTATTTGGGGAACTTGGAGTCAATCCTCTCGTATATGAGATTGACCAAGACCCTGATTACAGGGAAATAGAGAAAGCTCTCATGAGGCTAGGATGCAATGCACCAGTACCAGCCGTATTCATCGGCGGAAAGCTGGTCGGATCCACAAATGAAATCATGTCACACCACCTAAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCATGCTTTGAATAAATACTAAATCTAATCAAATTATTGACTATTCTGTTGGAGAAGGAAAACAATAATAATTGGCTCAAGTTTATAATGAATAGTTATGTTATGTCTTATGTCTCAAGAATTATGTAGCAATTGTTTAGCTGTGTAGTATGTAATACCTTTGTTATTGATAATGAAGTCAGCTCCTATTTTATTGTG

mRNA sequence

ATGGATAAGGTTAAAAGGTTGGTTGCCGAGAGGAGTGTGGTCATCTTCAGCAAAAGCTCATGCTGCCTATCATATGCAGTTAACATTCTATTTGGGGAACTTGGAGTCAATCCTCTCGTATATGAGATTGACCAAGACCCTGATTACAGGGAAATAGAGAAAGCTCTCATGAGGCTAGGATGCAATGCACCAGTACCAGCCGTATTCATCGGCGGAAAGCTGGTCGGATCCACAAATGAAATCATGTCACACCACCTAAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCATGCTTTGAATAAATACTAA

Coding sequence (CDS)

ATGGATAAGGTTAAAAGGTTGGTTGCCGAGAGGAGTGTGGTCATCTTCAGCAAAAGCTCATGCTGCCTATCATATGCAGTTAACATTCTATTTGGGGAACTTGGAGTCAATCCTCTCGTATATGAGATTGACCAAGACCCTGATTACAGGGAAATAGAGAAAGCTCTCATGAGGCTAGGATGCAATGCACCAGTACCAGCCGTATTCATCGGCGGAAAGCTGGTCGGATCCACAAATGAAATCATGTCACACCACCTAAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCATGCTTTGAATAAATACTAA

Protein sequence

MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLGCNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY*

Homology

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BLAST of Csa7G394080 vs. Swiss-Prot
Match: GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-33
Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIFSKSSCC+SYAV +LF +LGV+P V+EID+DP+ REIEKALMRLG
Sbjct: 1  MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C+ PVPA+F+GGKL+GSTNE+MS HLSG L  ++
Sbjct: 61 CSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLV 94

[Close]

BLAST of Csa7G394080 vs. Swiss-Prot
Match: GRS11_ARATH (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-33
Identity = 67/94 (71.28%), Postives = 79/94 (84.04%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCLSYAV +LF +LGVNP ++EID+DP+ REIEKALMRLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C+ PVPAVFIGGKLVGSTNE+MS HLS  L  ++
Sbjct: 61 CSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLV 94

[Close]

BLAST of Csa7G394080 vs. Swiss-Prot
Match: GRC13_ARATH (Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 5.4e-31
Identity = 64/94 (68.09%), Postives = 75/94 (79.79%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCL YAV ILF +L V P ++EID DPD REIEKAL+RLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C+  VPAVF+GGKLVGSTNE+MS HLSG L  ++
Sbjct: 61 CSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLI 94

[Close]

BLAST of Csa7G394080 vs. Swiss-Prot
Match: GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-29
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCL YAV ILF +L V P ++EID DPD REIEKAL+RLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C   VPAVF+ GKLVGSTN++MS HLSG L  ++
Sbjct: 61 CANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLI 94

[Close]

BLAST of Csa7G394080 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMR-L 60
           MD+V RL A+R+VVIFS SSCC+ + V  LF ELGVNP V E+D+DP  +E+EKAL R L
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 61  GCNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHAL 101
           G +  VPAVFIGG+LVGST+++MS HLSG+L  +L  + AL
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGAL 101

[Close]

BLAST of Csa7G394080 vs. TrEMBL
Match: A0A0A0K5X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394080 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.6e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY 104
           CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY 103

[Close]

BLAST of Csa7G394080 vs. TrEMBL
Match: F6HQ12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01390 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-34
Identity = 75/94 (79.79%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV RL +E+ VVIFSKSSCCL YAVNILF ELGV P V+EIDQDPD RE+EKAL+RLG
Sbjct: 1  MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVTPTVHEIDQDPDGREMEKALLRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          CNAPVPAVFIGGKLVGSTNE+MS HLSG L  +L
Sbjct: 61 CNAPVPAVFIGGKLVGSTNEVMSRHLSGSLIPLL 94

[Close]

BLAST of Csa7G394080 vs. TrEMBL
Match: A0A0B2SEQ0_GLYSO (Glutaredoxin-C13 OS=Glycine soja GN=glysoja_002128 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.7e-34
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKV RL +E+ VVIF+KSSCCL YAVNILF ELGVNP+V+EID DP+ RE+EKAL+RLG
Sbjct: 1   MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 102
           C APVPAVFIGGKL GSTNEIMS HLSG LT+ML    AL+
Sbjct: 61  CTAPVPAVFIGGKLRGSTNEIMSLHLSGSLTQMLKPYQALS 101

[Close]

BLAST of Csa7G394080 vs. TrEMBL
Match: C6SW47_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G207300 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.7e-34
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKV RL +E+ VVIF+KSSCCL YAVNILF ELGVNP+V+EID DP+ RE+EKAL+RLG
Sbjct: 1   MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 102
           C APVPAVFIGGKL GSTNEIMS HLSG LT+ML    AL+
Sbjct: 61  CTAPVPAVFIGGKLRGSTNEIMSLHLSGSLTQMLKPYQALS 101

[Close]

BLAST of Csa7G394080 vs. TrEMBL
Match: C6SXG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G210100 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-34
Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKV RL +E+ VVIF+KSSCCL YAVNILF ELGVNP+V+EID DP+ RE+EKAL+R G
Sbjct: 1   MDKVTRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLRQG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 102
           C APVPAVFIGGKL+GSTNEIMS HLSG LT+ML    AL+
Sbjct: 61  CTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQMLKPYQALS 101

[Close]

BLAST of Csa7G394080 vs. TAIR10
Match: AT2G30540.1 (AT2G30540.1 Thioredoxin superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 1.9e-34
Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIFSKSSCC+SYAV +LF +LGV+P V+EID+DP+ REIEKALMRLG
Sbjct: 1  MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C+ PVPA+F+GGKL+GSTNE+MS HLSG L  ++
Sbjct: 61 CSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLV 94

[Close]

BLAST of Csa7G394080 vs. TAIR10
Match: AT1G06830.1 (AT1G06830.1 Glutaredoxin family protein)

HSP 1 Score: 142.1 bits (357), Expect = 1.9e-34
Identity = 67/94 (71.28%), Postives = 79/94 (84.04%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCLSYAV +LF +LGVNP ++EID+DP+ REIEKALMRLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C+ PVPAVFIGGKLVGSTNE+MS HLS  L  ++
Sbjct: 61 CSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLV 94

[Close]

BLAST of Csa7G394080 vs. TAIR10
Match: AT2G47880.1 (AT2G47880.1 Glutaredoxin family protein)

HSP 1 Score: 134.8 bits (338), Expect = 3.0e-32
Identity = 64/94 (68.09%), Postives = 75/94 (79.79%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCL YAV ILF +L V P ++EID DPD REIEKAL+RLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C+  VPAVF+GGKLVGSTNE+MS HLSG L  ++
Sbjct: 61 CSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLI 94

[Close]

BLAST of Csa7G394080 vs. TAIR10
Match: AT3G62960.1 (AT3G62960.1 Thioredoxin superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-30
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCL YAV ILF +L V P ++EID DPD REIEKAL+RLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          C   VPAVF+ GKLVGSTN++MS HLSG L  ++
Sbjct: 61 CANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLI 94

[Close]

BLAST of Csa7G394080 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 2.5e-26
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MD + ++V ER VVI+SKSSCC+S+ +  L  + G NP VYE+D+    REIE+AL+RLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHAL 101
           C+  VP VFIGG+LVG  NE+MS HL+G L  ML ++ AL
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGAL 100

[Close]

BLAST of Csa7G394080 vs. NCBI nr
Match: gi|449436549|ref|XP_004136055.1| (PREDICTED: monothiol glutaredoxin-S11 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 8.0e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY 104
           CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALNKY 103

[Close]

BLAST of Csa7G394080 vs. NCBI nr
Match: gi|1012183911|ref|XP_015968943.1| (PREDICTED: monothiol glutaredoxin-S11-like [Arachis duranensis])

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34
Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          M+KV RL +E+ VVIF+KSSCCL YAVNILF E+GV+P+V+EIDQDPD RE+EKALMRLG
Sbjct: 1  MEKVTRLASEKGVVIFTKSSCCLCYAVNILFQEIGVSPVVHEIDQDPDGREMEKALMRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          CNAPVPAVFIGGKL+GSTNEIMS HLSG LT++L
Sbjct: 61 CNAPVPAVFIGGKLMGSTNEIMSMHLSGSLTQLL 94

[Close]

BLAST of Csa7G394080 vs. NCBI nr
Match: gi|225436777|ref|XP_002268050.1| (PREDICTED: glutaredoxin-C13 [Vitis vinifera])

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-34
Identity = 75/94 (79.79%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
          MDKV RL +E+ VVIFSKSSCCL YAVNILF ELGV P V+EIDQDPD RE+EKAL+RLG
Sbjct: 1  MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVTPTVHEIDQDPDGREMEKALLRLG 60

Query: 61 CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKML 95
          CNAPVPAVFIGGKLVGSTNE+MS HLSG L  +L
Sbjct: 61 CNAPVPAVFIGGKLVGSTNEVMSRHLSGSLIPLL 94

[Close]

BLAST of Csa7G394080 vs. NCBI nr
Match: gi|351723175|ref|NP_001235478.1| (uncharacterized protein LOC100499748 [Glycine max])

HSP 1 Score: 151.8 bits (382), Expect = 6.8e-34
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKV RL +E+ VVIF+KSSCCL YAVNILF ELGVNP+V+EID DP+ RE+EKAL+RLG
Sbjct: 1   MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 102
           C APVPAVFIGGKL GSTNEIMS HLSG LT+ML    AL+
Sbjct: 61  CTAPVPAVFIGGKLRGSTNEIMSLHLSGSLTQMLKPYQALS 101

[Close]

BLAST of Csa7G394080 vs. NCBI nr
Match: gi|1012360431|gb|KYP71615.1| (Glutaredoxin-C13 [Cajanus cajan])

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-33
Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDYREIEKALMRLG 60
           MDKV RL +E+ VVIF+KSSCCL YAVNILF ELGV P+V+EID DP+ RE+EKAL+RLG
Sbjct: 1   MDKVTRLASEKGVVIFTKSSCCLCYAVNILFHELGVRPVVHEIDHDPEGREMEKALLRLG 60

Query: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 102
           C APVPAVFIGGKL+GSTNEIMS HLSG LT+ML    AL+
Sbjct: 61  CTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQMLKPYQALS 101

The following BLAST results are available for this feature:

BLAST of Csa7G394080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXS9_ARATH	3.4e-33	69.15	Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1	[more]
GRS11_ARATH	3.4e-33	71.28	Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1	[more]
GRC13_ARATH	5.4e-31	68.09	Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1	[more]
GRC14_ARATH	3.0e-29	65.96	Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1	[more]
GRXC1_ORYSJ	2.0e-25	60.40	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	[more]

BLAST of Csa7G394080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5X2_CUCSA	5.6e-51	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394080 PE=4 SV=1	[more]
F6HQ12_VITVI	1.6e-34	79.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01390 PE=4 SV=...	[more]
A0A0B2SEQ0_GLYSO	4.7e-34	75.25	Glutaredoxin-C13 OS=Glycine soja GN=glysoja_002128 PE=4 SV=1	[more]
C6SW47_SOYBN	4.7e-34	75.25	Uncharacterized protein OS=Glycine max GN=GLYMA_19G207300 PE=2 SV=1	[more]
C6SXG8_SOYBN	8.1e-34	74.26	Uncharacterized protein OS=Glycine max GN=GLYMA_03G210100 PE=2 SV=1	[more]

BLAST of Csa7G394080 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30540.1	1.9e-34	69.15	Thioredoxin superfamily protein	[more]
AT1G06830.1	1.9e-34	71.28	Glutaredoxin family protein	[more]
AT2G47880.1	3.0e-32	68.09	Glutaredoxin family protein	[more]
AT3G62960.1	1.7e-30	65.96	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.5e-26	55.00	Thioredoxin superfamily protein	[more]

BLAST of Csa7G394080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436549\|ref\|XP_004136055.1\|	8.0e-51	100.00	PREDICTED: monothiol glutaredoxin-S11 [Cucumis sativus]	[more]
gi\|1012183911\|ref\|XP_015968943.1\|	1.8e-34	78.72	PREDICTED: monothiol glutaredoxin-S11-like [Arachis duranensis]	[more]
gi\|225436777\|ref\|XP_002268050.1\|	2.3e-34	79.79	PREDICTED: glutaredoxin-C13 [Vitis vinifera]	[more]
gi\|351723175\|ref\|NP_001235478.1\|	6.8e-34	75.25	uncharacterized protein LOC100499748 [Glycine max]	[more]
gi\|1012360431\|gb\|KYP71615.1\|	1.2e-33	74.26	Glutaredoxin-C13 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048653	anther development
biological_process	GO:0006995	cellular response to nitrogen starvation
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU085616	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G394080.1	Csa7G394080.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU085616	CU085616	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 score: 1.8
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 19
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 4..100 score: 5.4
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 2..100 score: 6.3
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 1..96 score: 5.51
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..100 score: 2.9
None	No IPR available	PANTHER	PTHR10168:SF57	GLUTAREDOXIN-C13-RELATED	coord: 1..100 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G394080	Cla021715	Watermelon (97103) v1	cuwmB588
Csa7G394080	Cla014694	Watermelon (97103) v1	cuwmB568
Csa7G394080	MELO3C016056	Melon (DHL92) v3.5.1	cumeB532
Csa7G394080	ClCG09G006330	Watermelon (Charleston Gray)	cuwcgB526
Csa7G394080	Lsi02G023610	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G394080	MELO3C016056.2	Melon (DHL92) v3.6.1	cumedB511
Csa7G394080	Cla97C09G168880	Watermelon (97103) v2	cuwmbB572
Csa7G394080	Cla97C05G087350	Watermelon (97103) v2	cuwmbB539
Csa7G394080	BhiUN245G49	Wax gourd	cuwgoB654
Csa7G394080	Bhi01G000689	Wax gourd	cuwgoB657
Csa7G394080	CSPI07G17040	Wild cucumber (PI 183967)	cpicuB354
Csa7G394080	Cucsa.025230	Cucumber (Gy14) v1	cgycuB519
Csa7G394080	CmaCh17G011240	Cucurbita maxima (Rimu)	cmacuB388
Csa7G394080	CmoCh08G003880	Cucurbita moschata (Rifu)	cmocuB900
Csa7G394080	CmoCh17G010990	Cucurbita moschata (Rifu)	cmocuB378
Csa7G394080	Cp4.1LG12g05420	Cucurbita pepo (Zucchini)	cpecuB161
Csa7G394080	CsGy7G015480	Cucumber (Gy14) v2	cgybcuB323
Csa7G394080	Carg22160	Silver-seed gourd	carcuB0876

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G394080	Wax gourd	cuwgoB653
Csa7G394080	Cucurbita maxima (Rimu)	cmacuB914
Csa7G394080	Cucurbita pepo (Zucchini)	cpecuB343
Csa7G394080	Silver-seed gourd	carcuB0119