CSPI07G17040 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCAAACTCAAACTCATAATACAACAAGCTTTGATATTAGTTTTCTCTTGCGCACTTTTTCTTCTTAATATTTAAAACCTATATAACCGTATTTGGACCAAATTTGGTCAAATTTGGTCCAAAGAGGTTATAAGGTTTTAAACAAACTTGAAAGAAACCTTAGATATCAAGTGTACTTGTGTGTTGCTTGGCTTCATTTTATCTGCAAGGAAAACTCTATCATATTAAGAAGGCATGGATAAGGTTAAAAGGTTGGTTGCCGAGAGGAGTGTGGTCATCTTCAGCAAAAGCTCATGCTGCCTATCATATGCAGTTAACATTCTATTTGGGGAACTTGGAGTCAATCCTCTCGTATATGAGATTGACCAAGACCCTGATTACAGGGAAATAGAGAAAGCTCTCATGAGGCTAGGATGCAATGCACCAGTACCCGCCGTATTCATCGGCGGAAAGCTGGTCGGATCCACAAATGAAATCATGTCACACCACCTAAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCATGCTTTGAATAAATACTAAATCTAATCAAATTATTGACTATTCTGTTGGAGAAGGAAAACAATAATAATTGGCTCAAGTTTATAATGAATAGTTATGTTATGTCTTATGTCTCAAGAATTATGTAGCAATTGTTTAGCTGTGTAGTATGTAATACCTTTGTTATTGATAATGAAGTCAGCTCCTATTTTATTGTGTTTATATTTTTCTCAATTGGTCTCTGAGCATTCGACAAAGTTGCAC ATGGATAAGGTTAAAAGGTTGGTTGCCGAGAGGAGTGTGGTCATCTTCAGCAAAAGCTCATGCTGCCTATCATATGCAGTTAACATTCTATTTGGGGAACTTGGAGTCAATCCTCTCGTATATGAGATTGACCAAGACCCTGATTACAGGGAAATAGAGAAAGCTCTCATGAGGCTAGGATGCAATGCACCAGTACCCGCCGTATTCATCGGCGGAAAGCTGGTCGGATCCACAAATGAAATCATGTCACACCACCTAAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCATGCTTTGAATAAATACTAA ATGGATAAGGTTAAAAGGTTGGTTGCCGAGAGGAGTGTGGTCATCTTCAGCAAAAGCTCATGCTGCCTATCATATGCAGTTAACATTCTATTTGGGGAACTTGGAGTCAATCCTCTCGTATATGAGATTGACCAAGACCCTGATTACAGGGAAATAGAGAAAGCTCTCATGAGGCTAGGATGCAATGCACCAGTACCCGCCGTATTCATCGGCGGAAAGCTGGTCGGATCCACAAATGAAATCATGTCACACCACCTAAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCATGCTTTGAATAAATACTAA
BLAST of CSPI07G17040 vs. Swiss-Prot
Match: GRS11_ARATH (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 8.9e-34 Identity = 67/94 (71.28%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of CSPI07G17040 vs. Swiss-Prot
Match: GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 8.9e-34 Identity = 65/94 (69.15%), Postives = 82/94 (87.23%), Query Frame = 1
BLAST of CSPI07G17040 vs. Swiss-Prot
Match: GRC13_ARATH (Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-31 Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 1
BLAST of CSPI07G17040 vs. Swiss-Prot
Match: GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 7.8e-30 Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 1
BLAST of CSPI07G17040 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.2e-26 Identity = 61/101 (60.40%), Postives = 78/101 (77.23%), Query Frame = 1
BLAST of CSPI07G17040 vs. TrEMBL
Match: A0A0A0K5X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394080 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.1e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI07G17040 vs. TrEMBL
Match: F6HQ12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01390 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 4.3e-35 Identity = 75/94 (79.79%), Postives = 82/94 (87.23%), Query Frame = 1
BLAST of CSPI07G17040 vs. TrEMBL
Match: C6SW47_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G207300 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-34 Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1
BLAST of CSPI07G17040 vs. TrEMBL
Match: A0A0B2SEQ0_GLYSO (Glutaredoxin-C13 OS=Glycine soja GN=glysoja_002128 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-34 Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1
BLAST of CSPI07G17040 vs. TrEMBL
Match: A0A0B2R3K6_GLYSO (Glutaredoxin-C13 OS=Glycine soja GN=glysoja_038852 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.1e-34 Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 1
BLAST of CSPI07G17040 vs. TAIR10
Match: AT1G06830.1 (AT1G06830.1 Glutaredoxin family protein) HSP 1 Score: 144.1 bits (362), Expect = 5.0e-35 Identity = 67/94 (71.28%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of CSPI07G17040 vs. TAIR10
Match: AT2G30540.1 (AT2G30540.1 Thioredoxin superfamily protein) HSP 1 Score: 144.1 bits (362), Expect = 5.0e-35 Identity = 65/94 (69.15%), Postives = 82/94 (87.23%), Query Frame = 1
BLAST of CSPI07G17040 vs. TAIR10
Match: AT2G47880.1 (AT2G47880.1 Glutaredoxin family protein) HSP 1 Score: 136.7 bits (343), Expect = 8.0e-33 Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 1
BLAST of CSPI07G17040 vs. TAIR10
Match: AT3G62960.1 (AT3G62960.1 Thioredoxin superfamily protein) HSP 1 Score: 131.0 bits (328), Expect = 4.4e-31 Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 1
BLAST of CSPI07G17040 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein) HSP 1 Score: 117.1 bits (292), Expect = 6.5e-27 Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 1
BLAST of CSPI07G17040 vs. NCBI nr
Match: gi|449436549|ref|XP_004136055.1| (PREDICTED: monothiol glutaredoxin-S11 [Cucumis sativus]) HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI07G17040 vs. NCBI nr
Match: gi|1012183911|ref|XP_015968943.1| (PREDICTED: monothiol glutaredoxin-S11-like [Arachis duranensis]) HSP 1 Score: 155.6 bits (392), Expect = 4.7e-35 Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = 1
BLAST of CSPI07G17040 vs. NCBI nr
Match: gi|225436777|ref|XP_002268050.1| (PREDICTED: glutaredoxin-C13 [Vitis vinifera]) HSP 1 Score: 155.2 bits (391), Expect = 6.2e-35 Identity = 75/94 (79.79%), Postives = 82/94 (87.23%), Query Frame = 1
BLAST of CSPI07G17040 vs. NCBI nr
Match: gi|351723175|ref|NP_001235478.1| (uncharacterized protein LOC100499748 [Glycine max]) HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34 Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1
BLAST of CSPI07G17040 vs. NCBI nr
Match: gi|1012360431|gb|KYP71615.1| (Glutaredoxin-C13 [Cajanus cajan]) HSP 1 Score: 152.9 bits (385), Expect = 3.1e-34 Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|