Csa7G041900 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCAGTGACGTGTAAAAGGGGATTTTTTTTGGATAAACCTTGCTTGAGGGTTTTAGGGCTTTCTATTTGCTTCCACCTTTCAACTCGTATTCTCTTCATTTCTCCAAATCCGTGGGCAATTTTAAAGGTAATGATCTGATTTCTATCAATCTTTTGAATTCTAATGGACTATTTTTTGCAGTCTTTTTCTAAGTTTTAGTTTTAGTTTTAGTTTGTTTCCTCTTTTGCATTTTTGAAACTTTCTACGAGTTTAATGAAGAATTGTAGGGAAACGAGGAGGGTTTTCTTTGAATGGGAATACCCATGTCCTTCTTTATTGAGCTTGAGCTTGTGTCGTCTGTTTTAGCCGCTACGACAAAATTTTCATTACTGGGTCTTGTAGATTGTGATTGCAAGATTTGCCATGCTGAAATTTCTTAGTATATTACTAGAATTGCAATGCCTTTCCAAAACCTGTTTGTTGGAAATTTTGTGTTTTTTACGTATCAAGAAATGAAGTTTTGATGGAAGGGAATGCCACCATAAATGTGCAATTAGAAGTTGGAAACTCTGTTTTCATAAACCCATTGATAAAGATTGAGAGAGCCCAACAACAAAATGAACGGGCAAATTCTATCAGTAGAGTTAGGGTTTAAGAGCAATAGAACTTTAAGAGTGGTTGAAAAACTTGTGGGGAGCTGTGAACCCTTTCTAGATTTCACGCCTCTCTCGGAGTTTTCCATTATTTAGATCTTATTTTTGCTTGACTGGAGCCCTTTCTTAGATCAGTGACTTTTCCTTTTTGGTGTTTTCTTTTTATGTCTTCTGTATTCGTTCATTTTTTTTTCCCAATGAATGCTCGGCATTTTACTGAAGAAGATAAGTTTTAAACAGCTCAAAAGTTTTCTCGATCCTTTGCAGACAGTTTTATCCATCTTCTGTACTAGTTTGTCTGGGCTTCAACATTCTGTGAAGGTAGCATTTATATATTGTTAAGCATGGCGAGTATGCTGGCTGCTCCTACAATGGCCTCATTCCATGTGAGTATAGGGAGCAAAAACTATAGAAAGTTGAAATCTCACAGTGTAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAATTGTACAATGTAAAAGTTGAACGGAAAGTATCGGAGGAGCGCCTTTCCCAGCTCAGAGTTTCGAGTTGGTCGATATGGAAGACAGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTATACATTGAGGAAGGTGAAGTGAGAGTGGTTCCGGAAGGGAGCAAGCAGTACATGAGTTTTGTGGCCGGAGACCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTGTTTTTCAACGGACCTTATCAAGAGCGGTACAGTTTCAGAGCATATGGTGATGACCACTAATCGTTGCATCCTTTCAGACCAAAAAAAGAAAATTTGATTTCTTGTTTCTAGAATGCCATCAGTTCATTTCAAAGTTAAAACATATATTTCGTTAAACATGTCAAGTCTTGAAATCCTTTGGAAGTATGATGTTTGGCAGGTAGATTGCAATGAACAACAATGTAGGATAGGAATGACTGCCGAATTGGCATTTTGCTGGAAATTCAATGCCAAACTCCATTCTTGATTCCGCTCTTTCATACAATATCTTTTGTAAAAATAAAAATAGTATTAAAAAAACTATGAATTATTTATATTTTTCACTT ATGGCGAGTATGCTGGCTGCTCCTACAATGGCCTCATTCCATGTGAGTATAGGGAGCAAAAACTATAGAAAGTTGAAATCTCACAGTGTAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAATTGTACAATGTAAAAGTTGAACGGAAAGTATCGGAGGAGCGCCTTTCCCAGCTCAGAGTTTCGAGTTGGTCGATATGGAAGACAGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTATACATTGAGGAAGGTGAAGTGAGAGTGGTTCCGGAAGGGAGCAAGCAGTACATGAGTTTTGTGGCCGGAGACCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTGTTTTTCAACGGACCTTATCAAGAGCGGTACAGTTTCAGAGCATATGGTGATGACCACTAA ATGGCGAGTATGCTGGCTGCTCCTACAATGGCCTCATTCCATGTGAGTATAGGGAGCAAAAACTATAGAAAGTTGAAATCTCACAGTGTAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAATTGTACAATGTAAAAGTTGAACGGAAAGTATCGGAGGAGCGCCTTTCCCAGCTCAGAGTTTCGAGTTGGTCGATATGGAAGACAGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTATACATTGAGGAAGGTGAAGTGAGAGTGGTTCCGGAAGGGAGCAAGCAGTACATGAGTTTTGTGGCCGGAGACCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTGTTTTTCAACGGACCTTATCAAGAGCGGTACAGTTTCAGAGCATATGGTGATGACCACTAA MASMLAAPTMASFHVSIGSKNYRKLKSHSVRAMRIEKPLEELYNVKVERKVSEERLSQLRVSSWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDDH*
BLAST of Csa7G041900 vs. TrEMBL
Match: A0A0A0K6T4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041900 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 2.6e-75 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
BLAST of Csa7G041900 vs. TrEMBL
Match: V4TK83_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017105mg PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.5e-56 Identity = 106/143 (74.13%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of Csa7G041900 vs. TrEMBL
Match: A0A067ETP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032303mg PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 7.7e-56 Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of Csa7G041900 vs. TrEMBL
Match: A0A061DLK1_THECC (RmlC-like cupins superfamily protein OS=Theobroma cacao GN=TCM_002145 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 4.2e-54 Identity = 108/141 (76.60%), Postives = 119/141 (84.40%), Query Frame = 1
BLAST of Csa7G041900 vs. TrEMBL
Match: W9QHY8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004075 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 2.8e-53 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of Csa7G041900 vs. TAIR10
Match: AT2G32650.1 (AT2G32650.1 RmlC-like cupins superfamily protein) HSP 1 Score: 197.6 bits (501), Expect = 5.1e-51 Identity = 94/139 (67.63%), Postives = 106/139 (76.26%), Query Frame = 1
BLAST of Csa7G041900 vs. TAIR10
Match: AT2G32180.1 (AT2G32180.1 plastid transcriptionally active 18) HSP 1 Score: 197.2 bits (500), Expect = 6.7e-51 Identity = 94/139 (67.63%), Postives = 106/139 (76.26%), Query Frame = 1
BLAST of Csa7G041900 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein) HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10 Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 1
BLAST of Csa7G041900 vs. TAIR10
Match: AT4G10290.1 (AT4G10290.1 RmlC-like cupins superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 7.5e-10 Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 1
BLAST of Csa7G041900 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein) HSP 1 Score: 57.8 bits (138), Expect = 6.3e-09 Identity = 26/77 (33.77%), Postives = 45/77 (58.44%), Query Frame = 1
BLAST of Csa7G041900 vs. NCBI nr
Match: gi|449453533|ref|XP_004144511.1| (PREDICTED: uncharacterized protein LOC101204548 [Cucumis sativus]) HSP 1 Score: 289.3 bits (739), Expect = 3.7e-75 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
BLAST of Csa7G041900 vs. NCBI nr
Match: gi|659110887|ref|XP_008455463.1| (PREDICTED: uncharacterized protein LOC103495620 [Cucumis melo]) HSP 1 Score: 269.6 bits (688), Expect = 3.0e-69 Identity = 131/144 (90.97%), Postives = 134/144 (93.06%), Query Frame = 1
BLAST of Csa7G041900 vs. NCBI nr
Match: gi|567910609|ref|XP_006447618.1| (hypothetical protein CICLE_v10017105mg [Citrus clementina]) HSP 1 Score: 225.3 bits (573), Expect = 6.5e-56 Identity = 106/143 (74.13%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of Csa7G041900 vs. NCBI nr
Match: gi|641835298|gb|KDO54276.1| (hypothetical protein CISIN_1g032303mg [Citrus sinensis]) HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55 Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of Csa7G041900 vs. NCBI nr
Match: gi|502088209|ref|XP_004488767.1| (PREDICTED: uncharacterized protein LOC101508085 [Cicer arietinum]) HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54 Identity = 105/144 (72.92%), Postives = 120/144 (83.33%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |