CSPI07G03460 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTGGATAAACCTTGCTTGAGGGTTTTAGGGCTTTCTATTTGCTTCCACCTTTCAACTCGTATTCTCTTCATTTCTCCAAATCCGTGGGCAATTTTAAAGGTAATGATCTGATTTCTATCAATCTTTTGAATTCTAATTGACTATTTTTTGCAGTTTTTTTCTAAGTTTTAGTTTTAGTTTTAGTTTGTTTCCTCTTTTGCATTTTCGAAACTTTCTACGAGTTTAATGAAGAATTGTAGGGAAACGAGGAGGGTTTTCTTTGAATGGGAATACCCATGTCCTTCTTTATTGAGCTTGAGCTTGTGTCGTCTGCTTTAGCCGCTACGACAAAATTTTCATTACTGGGTCTTCTAGATTGTGATTGCAAGATTTGCCATGCTGAAACTTCTTAGTCTATTACTAGAATTGCAATGCCTTTCCAAAACCTGTTTGTTGGAAATTTTGTGTTTTTTACGTATCAAGAAATGAAGTTTTGATGGAAGGGAATGCCACCATAAATGTGCAATTAGAAGTTGGAAACTCTGTTTTCATAAACCCATTGTTAAAGATTGAGAGAGCCCAACAACAAAATGAACGGGCAAATTCTATCAGTAGAGTTAGGGTTTAAGAGCAATAGAACTTTAAGAGTGGTTGAAAAACTTGTGGGGAGCTGTGAACCCTTTCTAGATTTCACGCCTCTCTCGGAGTTTTCCATTATTTAGATCTTATTTTTGCTTGACTGGAGCCCTTTCTTAGATCAGTGACTTTTCCTTTTTGGTGTTTTCTTGTTATGTCTTCTGTATTCGTTCATTTTTTTTTCTCAATGAATGCTCGGCATTTTACTGAAGAAGATAAGTTTTAAACAGCTCAAAAGTTTTCTCGATCCTTTGCAGACAGTTTTATCCATCTTCTGTACTAGTTTGTCTGGGCTTCAACATTCTGTGAAGGTAGCATTTATATATTGTTAAGCATGGCGAGTATGCTGGCTGCTCCTACAATGGCCTCATTCCATGTGAGTATAGGGAGCAAAAACTATAGAAAGTTGAAATCTCACAGTGTAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAATTGTACAATGTAAAAGTTGAACGGAAAGTATCGGAGGAGCGCCTTTCCCAGCTCAGAGTTTCGAGTTGGTCGATATGGAAGACAGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTATACATTGAGGAAGGTGAAGTGAGAGTGGTTCCGGAAGGGAGCAAGCAGTACATGAGTTTTGTGGCCGGAGACCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTGTTTTTCAACGGACCTTATCAAGAGCGGTACAGTTTCAGAGCATATGGTGATGACCACTAATCGTTGCATCCTTTCAGACCAAAAAAAGAAAATTTGAATTCTTGTTTCTAGAATGCCATCAGTTCATTTCAAAGTTAAAACATATATTTCGTTAAACATGTCAAGTCTTGAAATCCTTTGGAAGTATGATGTTTGGCAGGTAGATTGCAATGAACAACAATGTAGGATAGGAATGACTGCCGAATTGGCATTTTGCTGGAAATTCAATGCCAAACTCCATTCTTGATTCCGCTCTTTCATACAATATCTTTTGTAAAAATAAAAATAGTATTAAAAAAACTATGAATTATTTCTATTTTTCACTT ATGGCGAGTATGCTGGCTGCTCCTACAATGGCCTCATTCCATGTGAGTATAGGGAGCAAAAACTATAGAAAGTTGAAATCTCACAGTGTAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAATTGTACAATGTAAAAGTTGAACGGAAAGTATCGGAGGAGCGCCTTTCCCAGCTCAGAGTTTCGAGTTGGTCGATATGGAAGACAGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTATACATTGAGGAAGGTGAAGTGAGAGTGGTTCCGGAAGGGAGCAAGCAGTACATGAGTTTTGTGGCCGGAGACCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTGTTTTTCAACGGACCTTATCAAGAGCGGTACAGTTTCAGAGCATATGGTGATGACCACTAA ATGGCGAGTATGCTGGCTGCTCCTACAATGGCCTCATTCCATGTGAGTATAGGGAGCAAAAACTATAGAAAGTTGAAATCTCACAGTGTAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAATTGTACAATGTAAAAGTTGAACGGAAAGTATCGGAGGAGCGCCTTTCCCAGCTCAGAGTTTCGAGTTGGTCGATATGGAAGACAGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTATACATTGAGGAAGGTGAAGTGAGAGTGGTTCCGGAAGGGAGCAAGCAGTACATGAGTTTTGTGGCCGGAGACCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTGTTTTTCAACGGACCTTATCAAGAGCGGTACAGTTTCAGAGCATATGGTGATGACCACTAA
BLAST of CSPI07G03460 vs. TrEMBL
Match: A0A0A0K6T4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041900 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 1.7e-74 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
BLAST of CSPI07G03460 vs. TrEMBL
Match: V4TK83_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017105mg PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.9e-55 Identity = 106/143 (74.13%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of CSPI07G03460 vs. TrEMBL
Match: A0A067ETP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032303mg PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 5.0e-55 Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of CSPI07G03460 vs. TrEMBL
Match: A0A061DLK1_THECC (RmlC-like cupins superfamily protein OS=Theobroma cacao GN=TCM_002145 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 2.8e-53 Identity = 108/141 (76.60%), Postives = 119/141 (84.40%), Query Frame = 1
BLAST of CSPI07G03460 vs. TrEMBL
Match: B9IAI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s15510g PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.4e-52 Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1
BLAST of CSPI07G03460 vs. TAIR10
Match: AT2G32650.1 (AT2G32650.1 RmlC-like cupins superfamily protein) HSP 1 Score: 194.9 bits (494), Expect = 3.3e-50 Identity = 94/139 (67.63%), Postives = 108/139 (77.70%), Query Frame = 1
BLAST of CSPI07G03460 vs. TAIR10
Match: AT2G32180.1 (AT2G32180.1 plastid transcriptionally active 18) HSP 1 Score: 194.5 bits (493), Expect = 4.3e-50 Identity = 94/139 (67.63%), Postives = 108/139 (77.70%), Query Frame = 1
BLAST of CSPI07G03460 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 7.5e-10 Identity = 34/114 (29.82%), Postives = 55/114 (48.25%), Query Frame = 1
BLAST of CSPI07G03460 vs. TAIR10
Match: AT4G10290.1 (AT4G10290.1 RmlC-like cupins superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 7.5e-10 Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 1
BLAST of CSPI07G03460 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein) HSP 1 Score: 57.8 bits (138), Expect = 6.3e-09 Identity = 26/77 (33.77%), Postives = 47/77 (61.04%), Query Frame = 1
BLAST of CSPI07G03460 vs. NCBI nr
Match: gi|449453533|ref|XP_004144511.1| (PREDICTED: uncharacterized protein LOC101204548 [Cucumis sativus]) HSP 1 Score: 286.6 bits (732), Expect = 2.4e-74 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
BLAST of CSPI07G03460 vs. NCBI nr
Match: gi|659110887|ref|XP_008455463.1| (PREDICTED: uncharacterized protein LOC103495620 [Cucumis melo]) HSP 1 Score: 266.9 bits (681), Expect = 2.0e-68 Identity = 131/144 (90.97%), Postives = 134/144 (93.06%), Query Frame = 1
BLAST of CSPI07G03460 vs. NCBI nr
Match: gi|567910609|ref|XP_006447618.1| (hypothetical protein CICLE_v10017105mg [Citrus clementina]) HSP 1 Score: 222.6 bits (566), Expect = 4.2e-55 Identity = 106/143 (74.13%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of CSPI07G03460 vs. NCBI nr
Match: gi|641835298|gb|KDO54276.1| (hypothetical protein CISIN_1g032303mg [Citrus sinensis]) HSP 1 Score: 221.9 bits (564), Expect = 7.2e-55 Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of CSPI07G03460 vs. NCBI nr
Match: gi|502088209|ref|XP_004488767.1| (PREDICTED: uncharacterized protein LOC101508085 [Cicer arietinum]) HSP 1 Score: 217.6 bits (553), Expect = 1.4e-53 Identity = 105/144 (72.92%), Postives = 120/144 (83.33%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |