Cp4.1LG04g03740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g03740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionplastid transcriptionally active 18
LocationCp4.1LG04 : 7064340 .. 7064774 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTATGCTTGCTGCTCCTACAATGGCGACATTCCGTGTGAATATAGGGAGCAAGAACCATACAAAGTTGAATTCTACCATCAAGGGATCTCTCAAAATTAGGGCTATGCGCATAGAGAAACCTCTTGAGGAGTTATACAATGTGAGAGTTGAACGTAAGGTATCAGAGGAACGGCTTTCCCAGCTAGGAATTTCGAGGTGGTCGACATGGAAGACAGGGAAGTGCAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTTTACATTGAGGAAGGTGAAGTGAGAGTAGTTCCTGAGGGGAGCAAGCAGTACATGAGTTTCGTGGCTGGTGACCTCGTTCGTTACCCAAAGTGGTTCGAAGCTGACCTTTTTTTCAATGGACCGTATCAAGAGCGTTACTGTTTCAAAGCATATGGTGATGACTACTAG

mRNA sequence

ATGGCGAGTATGCTTGCTGCTCCTACAATGGCGACATTCCGTGTGAATATAGGGAGCAAGAACCATACAAAGTTGAATTCTACCATCAAGGGATCTCTCAAAATTAGGGCTATGCGCATAGAGAAACCTCTTGAGGAGTTATACAATGTGAGAGTTGAACGTAAGGTATCAGAGGAACGGCTTTCCCAGCTAGGAATTTCGAGGTGGTCGACATGGAAGACAGGGAAGTGCAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTTTACATTGAGGAAGGTGAAGTGAGAGTAGTTCCTGAGGGGAGCAAGCAGTACATGAGTTTCGTGGCTGGTGACCTCGTTCGTTACCCAAAGTGGTTCGAAGCTGACCTTTTTTTCAATGGACCGTATCAAGAGCGTTACTGTTTCAAAGCATATGGTGATGACTACTAG

Coding sequence (CDS)

ATGGCGAGTATGCTTGCTGCTCCTACAATGGCGACATTCCGTGTGAATATAGGGAGCAAGAACCATACAAAGTTGAATTCTACCATCAAGGGATCTCTCAAAATTAGGGCTATGCGCATAGAGAAACCTCTTGAGGAGTTATACAATGTGAGAGTTGAACGTAAGGTATCAGAGGAACGGCTTTCCCAGCTAGGAATTTCGAGGTGGTCGACATGGAAGACAGGGAAGTGCAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTTTACATTGAGGAAGGTGAAGTGAGAGTAGTTCCTGAGGGGAGCAAGCAGTACATGAGTTTCGTGGCTGGTGACCTCGTTCGTTACCCAAAGTGGTTCGAAGCTGACCTTTTTTTCAATGGACCGTATCAAGAGCGTTACTGTTTCAAAGCATATGGTGATGACTACTAG

Protein sequence

MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEERLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKWFEADLFFNGPYQERYCFKAYGDDY
Homology
[Close]
BLAST of Cp4.1LG04g03740 vs. TrEMBL
Match: A0A0A0K6T4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041900 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-63
Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MASMLAAPTMA+F V+IGSKN+ KL S       +RAMRIEKPLEELYNV+VERKVSEER
Sbjct: 1   MASMLAAPTMASFHVSIGSKNYRKLKSH-----SVRAMRIEKPLEELYNVKVERKVSEER 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           LSQL +S WS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW
Sbjct: 61  LSQLRVSSWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDDY 145
           FEADLFFNGPYQERY F+AYGDD+
Sbjct: 121 FEADLFFNGPYQERYSFRAYGDDH 139

[Close]
BLAST of Cp4.1LG04g03740 vs. TrEMBL
Match: M5WSX4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013006mg PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-55
Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKG--SLKIRAMRIEKPLEELYNVRVERKVSE 60
           MAS++ APT ++  VN    + +K +ST +    +K++AMRIEKPLEELY VRVERKVS 
Sbjct: 1   MASVIMAPTFSSISVNRTGGDCSKWSSTNRHRRGMKLKAMRIEKPLEELYQVRVERKVSP 60

Query: 61  ERLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYP 120
           ERL++LG+SRWS WKTGKCKLPWDWQ DQLVYIEEGEVRVVPEGSKQYM FVAGDLVRYP
Sbjct: 61  ERLAELGVSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKQYMRFVAGDLVRYP 120

Query: 121 KWFEADLFFNGPYQERYCFKAYGDD 144
           KW EADLFFNGPYQERY F+AYGDD
Sbjct: 121 KWLEADLFFNGPYQERYRFRAYGDD 145

[Close]
BLAST of Cp4.1LG04g03740 vs. TrEMBL
Match: V4TK83_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017105mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-54
Identity = 105/143 (73.43%), Postives = 119/143 (83.22%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MA  ++APT+  F V   S++  KLN+       IRAMR+EKPLEELYNVRVER+VS ER
Sbjct: 1   MAGAISAPTLGFFSVKKTSRDSRKLNNGNLPCHGIRAMRVEKPLEELYNVRVERQVSPER 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           L +L +SRWS WKTGKCKLPWDWQ DQLVYIEEGEVRVVPEGS++YM F+AGDLVRYPKW
Sbjct: 61  LKELDVSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLVRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDD 144
           FEADLFFNGPYQERY F+AYGDD
Sbjct: 121 FEADLFFNGPYQERYSFRAYGDD 143

[Close]
BLAST of Cp4.1LG04g03740 vs. TrEMBL
Match: A0A067ETP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032303mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-54
Identity = 103/143 (72.03%), Postives = 120/143 (83.92%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MA ++++PT+  F V   S++  KLN+       IRAMR+EKPLEELYNVRVER+VS ER
Sbjct: 1   MAGVISSPTLGFFSVKKTSRDSRKLNNRNLPCHGIRAMRVEKPLEELYNVRVERQVSPER 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           L +L +SRWS WKTGKCKLPWDWQ DQLVYIEEGEVRVVPEGS++YM F+AGDL+RYPKW
Sbjct: 61  LKELDVSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSQRYMRFLAGDLIRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDD 144
           FEADLFFNGPYQERY F+AYGDD
Sbjct: 121 FEADLFFNGPYQERYSFRAYGDD 143

[Close]
BLAST of Cp4.1LG04g03740 vs. TrEMBL
Match: B9IAI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s15510g PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-54
Identity = 105/144 (72.92%), Postives = 121/144 (84.03%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MASM+ +PT   F VN  S++   L +TI+    I+AM IEKPLEELYN+RVERKVS +R
Sbjct: 1   MASMIISPT---FSVNRSSRDCKILKNTIRQCQGIKAMHIEKPLEELYNIRVERKVSRDR 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           L++LG+S+WS WKT KCKLPWDWQ DQLVYIEEGEVRVVPEGSK+YM FVAGDLVRYPKW
Sbjct: 61  LAELGVSKWSAWKTDKCKLPWDWQVDQLVYIEEGEVRVVPEGSKKYMRFVAGDLVRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDDY 145
           FEADLFFN PYQERY F+AYGDD+
Sbjct: 121 FEADLFFNAPYQERYSFRAYGDDH 141

[Close]
BLAST of Cp4.1LG04g03740 vs. TAIR10
Match: AT2G32650.1 (AT2G32650.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 207.2 bits (526), Expect = 6.7e-54
Identity = 91/118 (77.12%), Postives = 105/118 (88.98%), Query Frame = 1 

Query: 26  NSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEERLSQLGISRWSTWKTGKCKLPWDWQA 85
           N +++ + K+  M+ EKPLEELYNV+VERKVS++RL +LG+SRWS WKTGKCKLPWDWQ 
Sbjct: 22  NLSVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQV 81

Query: 86  DQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKWFEADLFFNGPYQERYCFKAYGDD 144
           DQLVYIE+GEVRVVPEGSK+YM F+AGDLVRYPKW EADLFFN PY ERYCFKAYGDD
Sbjct: 82  DQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGDD 139

[Close]
BLAST of Cp4.1LG04g03740 vs. TAIR10
Match: AT2G32180.1 (AT2G32180.1 plastid transcriptionally active 18)

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-53
Identity = 90/118 (76.27%), Postives = 105/118 (88.98%), Query Frame = 1 

Query: 26  NSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEERLSQLGISRWSTWKTGKCKLPWDWQA 85
           N +++ + ++  M+ EKPLEELYNV+VERKVS++RL +LG+SRWS WKTGKCKLPWDWQ 
Sbjct: 22  NLSVQRAFRVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQV 81

Query: 86  DQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKWFEADLFFNGPYQERYCFKAYGDD 144
           DQLVYIE+GEVRVVPEGSK+YM F+AGDLVRYPKW EADLFFN PY ERYCFKAYGDD
Sbjct: 82  DQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGDD 139

[Close]
BLAST of Cp4.1LG04g03740 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 1 

Query: 37  AMRIEKPLEELYNVRVERKVSEERLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEV 96
           A  I     E   + +E+   E +L+QLG+  W  W     K PW + A +  Y+ +G+V
Sbjct: 33  AAAIRAESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKV 92

Query: 97  RVVPEGSKQYMSFVAGDLVRYPK 120
           +V P GS + +   AGD V +PK
Sbjct: 93  KVYPNGSDEGVEIEAGDFVVFPK 115

[Close]
BLAST of Cp4.1LG04g03740 vs. TAIR10
Match: AT4G10290.1 (AT4G10290.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09
Identity = 26/77 (33.77%), Postives = 49/77 (63.64%), Query Frame = 1 

Query: 46  ELYNVRVERKVSEERLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEG--- 105
           E++ V+V R+ S+ +L++LG++ W  W++   K PW ++  + +Y  EG+++V  E    
Sbjct: 16  EIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHK 75

Query: 106 SKQYMSFVAGDLVRYPK 120
             + + FVAGDLV +P+
Sbjct: 76  EGEALEFVAGDLVVFPQ 92

[Close]
BLAST of Cp4.1LG04g03740 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.9e-09
Identity = 24/77 (31.17%), Postives = 47/77 (61.04%), Query Frame = 1 

Query: 46  ELYNVRVERKVSEERLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEG--- 105
           E++ V++ R+ S+ +L+QLG++ W  W+    K PW+++  + +Y  EG+V+V  +G   
Sbjct: 44  EIHGVKILRQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKVKVNVDGYDE 103

Query: 106 SKQYMSFVAGDLVRYPK 120
            ++      GD+V +PK
Sbjct: 104 EEETFEIGKGDVVVFPK 120

[Close]
BLAST of Cp4.1LG04g03740 vs. NCBI nr
Match: gi|659110887|ref|XP_008455463.1| (PREDICTED: uncharacterized protein LOC103495620 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 9.6e-71
Identity = 132/144 (91.67%), Postives = 138/144 (95.83%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MASMLAAPTMA+F VNIGSKN+TKLNSTIKGS  IRAMRIEKPLEELYNV+VERKVSEER
Sbjct: 1   MASMLAAPTMASFHVNIGSKNYTKLNSTIKGSHSIRAMRIEKPLEELYNVKVERKVSEER 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           LSQLG+SRWS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW
Sbjct: 61  LSQLGVSRWSVWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDDY 145
           FEADLFFNGPY ERY F+AYGDD+
Sbjct: 121 FEADLFFNGPYLERYSFRAYGDDH 144

[Close]
BLAST of Cp4.1LG04g03740 vs. NCBI nr
Match: gi|449453533|ref|XP_004144511.1| (PREDICTED: uncharacterized protein LOC101204548 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 3.3e-63
Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MASMLAAPTMA+F V+IGSKN+ KL S       +RAMRIEKPLEELYNV+VERKVSEER
Sbjct: 1   MASMLAAPTMASFHVSIGSKNYRKLKSH-----SVRAMRIEKPLEELYNVKVERKVSEER 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           LSQL +S WS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW
Sbjct: 61  LSQLRVSSWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDDY 145
           FEADLFFNGPYQERY F+AYGDD+
Sbjct: 121 FEADLFFNGPYQERYSFRAYGDDH 139

[Close]
BLAST of Cp4.1LG04g03740 vs. NCBI nr
Match: gi|502088209|ref|XP_004488767.1| (PREDICTED: uncharacterized protein LOC101508085 [Cicer arietinum])

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-55
Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKL-NSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEE 60
           MAS+L A T     VN GS++ +K  NS+I+G   I+AMRIEK LEELYNV+VERKVS E
Sbjct: 1   MASLLTASTFTCSPVNNGSRSFSKSSNSSIRGCC-IKAMRIEKSLEELYNVKVERKVSPE 60

Query: 61  RLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPK 120
           RL+QL +SRWSTWKTGKC+LPWDWQ DQLVY+EEGEVRVVPEGSK++M FVAGDL+RYPK
Sbjct: 61  RLAQLEVSRWSTWKTGKCRLPWDWQVDQLVYVEEGEVRVVPEGSKRFMQFVAGDLIRYPK 120

Query: 121 WFEADLFFNGPYQERYCFKAYGDDY 145
           WFEADL+FNGPYQERY F+AYGDDY
Sbjct: 121 WFEADLWFNGPYQERYSFRAYGDDY 144

[Close]
BLAST of Cp4.1LG04g03740 vs. NCBI nr
Match: gi|595928446|ref|XP_007215127.1| (hypothetical protein PRUPE_ppa013006mg [Prunus persica])

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-55
Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKG--SLKIRAMRIEKPLEELYNVRVERKVSE 60
           MAS++ APT ++  VN    + +K +ST +    +K++AMRIEKPLEELY VRVERKVS 
Sbjct: 1   MASVIMAPTFSSISVNRTGGDCSKWSSTNRHRRGMKLKAMRIEKPLEELYQVRVERKVSP 60

Query: 61  ERLSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYP 120
           ERL++LG+SRWS WKTGKCKLPWDWQ DQLVYIEEGEVRVVPEGSKQYM FVAGDLVRYP
Sbjct: 61  ERLAELGVSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKQYMRFVAGDLVRYP 120

Query: 121 KWFEADLFFNGPYQERYCFKAYGDD 144
           KW EADLFFNGPYQERY F+AYGDD
Sbjct: 121 KWLEADLFFNGPYQERYRFRAYGDD 145

[Close]
BLAST of Cp4.1LG04g03740 vs. NCBI nr
Match: gi|743907574|ref|XP_011047215.1| (PREDICTED: uncharacterized protein LOC105141641 [Populus euphratica])

HSP 1 Score: 222.2 bits (565), Expect = 5.7e-55
Identity = 106/144 (73.61%), Postives = 122/144 (84.72%), Query Frame = 1 

Query: 1   MASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60
           MASM+ +PT   F VN  S++   L +TI+    I+AM IEKPLEELYN+RVERKVS +R
Sbjct: 1   MASMIISPT---FSVNRSSRDCKILKNTIRQCQGIKAMHIEKPLEELYNIRVERKVSRDR 60

Query: 61  LSQLGISRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120
           L++LG+S+WS WKTGKCKLPWDWQ DQLVYIEEGEVRVVPEGSK+YM FVAGDLVRYPKW
Sbjct: 61  LAELGVSKWSEWKTGKCKLPWDWQVDQLVYIEEGEVRVVPEGSKKYMRFVAGDLVRYPKW 120

Query: 121 FEADLFFNGPYQERYCFKAYGDDY 145
           FEADLFFN PYQERY F+AYGDD+
Sbjct: 121 FEADLFFNAPYQERYSFRAYGDDH 141

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g03740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g03740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6T4_CUCSA2.3e-6384.72Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041900 PE=4 SV=1[more]
M5WSX4_PRUPE2.3e-5574.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013006mg PE=4 SV=1[more]
V4TK83_9ROSI1.2e-5473.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017105mg PE=4 SV=1[more]
A0A067ETP6_CITSI1.5e-5472.03Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032303mg PE=4 SV=1[more]
B9IAI8_POPTR2.0e-5472.92Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s15510g PE=4 SV=1[more]
BLAST of Cp4.1LG04g03740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32650.16.7e-5477.12 RmlC-like cupins superfamily protein[more]
AT2G32180.11.5e-5376.27 plastid transcriptionally active 18[more]
AT4G10300.12.0e-1033.73 RmlC-like cupins superfamily protein[more]
AT4G10290.11.3e-0933.77 RmlC-like cupins superfamily protein[more]
AT4G10280.12.9e-0931.17 RmlC-like cupins superfamily protein[more]
BLAST of Cp4.1LG04g03740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110887|ref|XP_008455463.1|9.6e-7191.67PREDICTED: uncharacterized protein LOC103495620 [Cucumis melo][more]
gi|449453533|ref|XP_004144511.1|3.3e-6384.72PREDICTED: uncharacterized protein LOC101204548 [Cucumis sativus][more]
gi|502088209|ref|XP_004488767.1|3.3e-5574.48PREDICTED: uncharacterized protein LOC101508085 [Cicer arietinum][more]
gi|595928446|ref|XP_007215127.1|3.3e-5574.48hypothetical protein PRUPE_ppa013006mg [Prunus persica][more]
gi|743907574|ref|XP_011047215.1|5.7e-5573.61PREDICTED: uncharacterized protein LOC105141641 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR008579DUF861_Cupin_3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g03740.1Cp4.1LG04g03740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008579Domain of unknown function DUF861, cupin-3PFAMPF05899Cupin_3coord: 62..134
score: 7.5
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 52..136
score: 1.6
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 45..137
score: 2.6
NoneNo IPR availablePANTHERPTHR33271FAMILY NOT NAMEDcoord: 6..143
score: 6.7
NoneNo IPR availablePANTHERPTHR33271:SF7PLASTID TRANSCRIPTIONALLY ACTIVE 18coord: 6..143
score: 6.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g03740Cucsa.148790Cucumber (Gy14) v1cgycpeB0395
Cp4.1LG04g03740CmaCh11G018080Cucurbita maxima (Rimu)cmacpeB148
Cp4.1LG04g03740Cla015622Watermelon (97103) v1cpewmB675
Cp4.1LG04g03740Csa7G041900Cucumber (Chinese Long) v2cpecuB690
Cp4.1LG04g03740MELO3C018840Melon (DHL92) v3.5.1cpemeB609
Cp4.1LG04g03740ClCG02G002160Watermelon (Charleston Gray)cpewcgB596
Cp4.1LG04g03740CSPI07G03460Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g03740Lsi11G014260Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g03740MELO3C018840.2Melon (DHL92) v3.6.1cpemedB721
Cp4.1LG04g03740CsaV3_7G003350Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g03740Bhi05G001205Wax gourdcpewgoB0852
Cp4.1LG04g03740CsGy7G003140Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g03740Carg27153Silver-seed gourdcarcpeB0421
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g03740Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG04g03740Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG04g03740Cucurbita pepo (Zucchini)cpecpeB492
Cp4.1LG04g03740Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g03740Cucurbita maxima (Rimu)cmacpeB574
Cp4.1LG04g03740Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g03740Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g03740Cucurbita moschata (Rifu)cmocpeB525
Cp4.1LG04g03740Wild cucumber (PI 183967)cpecpiB666
Cp4.1LG04g03740Cucumber (Chinese Long) v2cpecuB663
Cp4.1LG04g03740Bottle gourd (USVL1VR-Ls)cpelsiB520
Cp4.1LG04g03740Melon (DHL92) v3.5.1cpemeB599
Cp4.1LG04g03740Cucumber (Gy14) v2cgybcpeB235
Cp4.1LG04g03740Melon (DHL92) v3.6.1cpemedB773
Cp4.1LG04g03740Silver-seed gourdcarcpeB0473
Cp4.1LG04g03740Cucumber (Chinese Long) v3cpecucB0828
Cp4.1LG04g03740Cucumber (Chinese Long) v3cpecucB0855
Cp4.1LG04g03740Wax gourdcpewgoB0862