Csa6G452740 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G452740
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr6 : 21640565 .. 21642084 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGTACCGACCAACCGTCAAACTCATCGCTGAAACACTATCTTCTCCTAATTTCCAATCATCTTCGTTATCTTTCTCTCAGTTCCTTTTTCCTGTTGCTTCTTCGATATCAAATCCATCAATGGACGCCATTTCTTATTCAACAAACCAATTCATTCGCTACCCAAATGTCAATTCTCGCCCATGTGTTTTCTCTTCAATGCCCTCCCATAATCCGTCGCTGGTTTTCTTCGCTTCCAACACTCGGTATCGCCAAATCTCCAATTTCTCCCAAGTCTCAGGTCCATGCCACAGGATTCCCAAGCTGGTGCCCAAGTCTTCGGATGAGAACAACGACATTGTGCCCTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCTAGGTTTCAGGTCCTACTCTTCCAGGTAGGTCAAAATCCCCCCCACCTCTTCCCAACTTCAATAATCCATGAAGAGTATAATAGGTAATTGATTTCTTGGCTGCTTGCATTGCAACAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTGAGTAATGGGCTTGCATTACGTGGGTTACTGATTAAAATTTTTTAATGATAAAGTAATGTTAGAGGTTCTGTAAGGAAGCTAGACGACATCATGCTCGATCATTGTTAACGATGCCGGCCAATTTTAGATAAGAGGATACTGTCGCCAACAAAAAGCCAAGAGGCTCTTTGGTATTGCTGATATAAAACTAGTAGCAGGAAGTTGACTGATTGACAAAACCCAAACAATAGGTCAAAAAAAAAAAAGTTCAATAGCTGTTCTTTTTGTTTGTGGGTTCTTTATATGTATTTATATGACGATATATCATCCTAATAATTATTCTCTTGTGAATAGACGTACAGAGCTACTCTTGATTGGCATTGCCTAGCACGATGAGACAAATACATTTGCACCTTATAATTTTGAACTGTGAAATTAACAACTATGACAAGTCTTTGCCTTATTTTGGTCTACATGTTCTTAATATTTGCTATGCATAAGATATGGGGAGTTTTCGTACATAATAAGTTGATTACCTTTTTCAGCAAAAGCTCTAGCGGGAACTTATTTTTCATGAAAATCAAACAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTTCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTAGTAGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTATGAGAAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGAGTTAATATTTGTCTATGTAAATGTACCAAACTTGTCTTTTCTTCTGTCATTAGGTAATGTAAATGACTGTCGGTGAAGGTTCACTTCAATGATTGATCTGGCTCTCATATATATATATGTTCATATCCC

mRNA sequence

ATGGACGCCATTTCTTATTCAACAAACCAATTCATTCGCTACCCAAATGTCAATTCTCGCCCATGTGTTTTCTCTTCAATGCCCTCCCATAATCCGTCGCTGGTTTTCTTCGCTTCCAACACTCGGTATCGCCAAATCTCCAATTTCTCCCAAGTCTCAGGTCCATGCCACAGGATTCCCAAGCTGGTGCCCAAGTCTTCGGATGAGAACAACGACATTGTGCCCTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCTAGGTTTCAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTTCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTAGTAGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTATGAGAAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGA

Coding sequence (CDS)

ATGGACGCCATTTCTTATTCAACAAACCAATTCATTCGCTACCCAAATGTCAATTCTCGCCCATGTGTTTTCTCTTCAATGCCCTCCCATAATCCGTCGCTGGTTTTCTTCGCTTCCAACACTCGGTATCGCCAAATCTCCAATTTCTCCCAAGTCTCAGGTCCATGCCACAGGATTCCCAAGCTGGTGCCCAAGTCTTCGGATGAGAACAACGACATTGTGCCCTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCTAGGTTTCAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTTCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTAGTAGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTATGAGAAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGA

Protein sequence

MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV*

Homology

[Close]

BLAST of Csa6G452740 vs. TrEMBL
Match: A0A0A0KFD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 2.7e-110
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60
           MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP
Sbjct: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60

Query: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120
           KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP
Sbjct: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180
           VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLGALKKSVEISRV 202
           EPRIMRSLLGALKKSVEISRV
Sbjct: 181 EPRIMRSLLGALKKSVEISRV 201

[Close]

BLAST of Csa6G452740 vs. TrEMBL
Match: A0A061EUJ9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_022663 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.1e-58
Identity = 120/179 (67.04%), Postives = 139/179 (77.65%), Query Frame = 1


Query: 23  VFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPED 82
           V SS+P     LVF     +    +  S   G  + I KL+ K+S   +DIVP+ DD ED
Sbjct: 45  VISSLP-----LVFLEHKKQRLPFTKLSGHYGQRNLIVKLMGKASAGKDDIVPAADDEED 104

Query: 83  GVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDG 142
           G+SLGTMKLP +TD+ RF+ LLFQWANSLCQGAN+PLP+PLK+DKIP G RLGFITIGDG
Sbjct: 105 GISLGTMKLPSNTDLQRFETLLFQWANSLCQGANVPLPIPLKIDKIPGGARLGFITIGDG 164

Query: 143 KTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 202
           KT+VLVYIDCLVFPAT  S P+FRAIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 165 KTDVLVYIDCLVFPATDGSGPMFRAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 218

[Close]

BLAST of Csa6G452740 vs. TrEMBL
Match: A0A0D2NT44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.1e-58
Identity = 117/155 (75.48%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 47  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 106
           S  S+  G    I KLV K+S   +DI P+ DDPE+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDITPAADDPENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 107 WANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFR 166
           WANSLCQGANLPLPVPLK+DKI  G RLGFIT+GDGKTEVLVYIDC+VFPAT +S PIFR
Sbjct: 105 WANSLCQGANLPLPVPLKIDKIAGGARLGFITVGDGKTEVLVYIDCIVFPATDNSGPIFR 164

Query: 167 AIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 202
           AIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 165 AIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 199

[Close]

BLAST of Csa6G452740 vs. TrEMBL
Match: A0A0B0PCD0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_29840 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-57
Identity = 117/155 (75.48%), Postives = 129/155 (83.23%), Query Frame = 1


Query: 47  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 106
           S  S+  G    I KLV K+S   +DI P+ DD E+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDIAPAADDLENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 107 WANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFR 166
           WANSLCQGANLPLPVPLK+DKI  G RLGFIT+GDGKTEVLVYIDCLVFPAT +S PIFR
Sbjct: 105 WANSLCQGANLPLPVPLKIDKIAGGARLGFITVGDGKTEVLVYIDCLVFPATDNSGPIFR 164

Query: 167 AIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 202
           AIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 165 AIRNGTLKDQSPPGEPRIMRSLLQALQKSVEIARV 199

[Close]

BLAST of Csa6G452740 vs. TrEMBL
Match: B9SWH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0293460 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 1


Query: 63  VPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVP 122
           V KSS +N+ IV ++DD E+GVSLGT+KLP DTD+ RF++LLFQWANSLCQGANLPLP P
Sbjct: 62  VAKSSPQNDGIVTADDDSENGVSLGTLKLPSDTDLPRFEILLFQWANSLCQGANLPLPAP 121

Query: 123 LKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEP 182
           LKVDKIP G RLGFITIGDGKTEVLVYIDCLVFPAT  S PIFRAIRNG LKDQSPPGEP
Sbjct: 122 LKVDKIPGGARLGFITIGDGKTEVLVYIDCLVFPATGDSGPIFRAIRNGPLKDQSPPGEP 181

Query: 183 RIMRSLLGALKKSVEISR 201
           RIMRSLL AL+KSVEI+R
Sbjct: 182 RIMRSLLQALQKSVEITR 199

[Close]

BLAST of Csa6G452740 vs. TAIR10
Match: AT2G36145.1 (AT2G36145.1 unknown protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 95/145 (65.52%), Postives = 114/145 (78.62%), Query Frame = 1


Query: 58  RIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANL 117
           ++ + +  ++   N  V +E+  EDGVSLGTMKLP+DTD+ARF+ LLFQWANSLCQGANL
Sbjct: 44  QVKRAIVANASPGNGGVKAEE--EDGVSLGTMKLPVDTDLARFETLLFQWANSLCQGANL 103

Query: 118 PLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQ 177
           PLPVPLKVD+I  G RLGFI + D GKT+V VYIDCLVF  T  +  +F+A RNGR KD+
Sbjct: 104 PLPVPLKVDRISGGARLGFIVMEDEGKTDVPVYIDCLVF-QTTENGVVFQATRNGRKKDK 163

Query: 178 SPPGEPRIMRSLLGALKKSVEISRV 202
           +PPGE RIMRSLLGALKK+VEI+RV
Sbjct: 164 APPGEERIMRSLLGALKKAVEIARV 185

[Close]

BLAST of Csa6G452740 vs. NCBI nr
Match: gi|449451154|ref|XP_004143327.1| (PREDICTED: uncharacterized protein LOC101214488 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 3.9e-110
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60
           MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP
Sbjct: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60

Query: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120
           KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP
Sbjct: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180
           VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLGALKKSVEISRV 202
           EPRIMRSLLGALKKSVEISRV
Sbjct: 181 EPRIMRSLLGALKKSVEISRV 201

[Close]

BLAST of Csa6G452740 vs. NCBI nr
Match: gi|659125240|ref|XP_008462584.1| (PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 4.2e-104
Identity = 191/201 (95.02%), Postives = 194/201 (96.52%), Query Frame = 1


Query: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60
           MDAISYSTNQF R+PNVNSRPCV S MPSHNPSLVFFASNTR+RQIS FSQ SGPCHRI 
Sbjct: 1   MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRIS 60

Query: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120
            LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP
Sbjct: 61  NLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180
           VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLGALKKSVEISRV 202
           EPRIMRSLLGALKKSVEISRV
Sbjct: 181 EPRIMRSLLGALKKSVEISRV 201

[Close]

BLAST of Csa6G452740 vs. NCBI nr
Match: gi|719974756|ref|XP_010245745.1| (PREDICTED: uncharacterized protein LOC104589201 [Nelumbo nucifera])

HSP 1 Score: 245.4 bits (625), Expect = 8.8e-62
Identity = 128/181 (70.72%), Postives = 145/181 (80.11%), Query Frame = 1


Query: 25  SSMPSHNPSLVFF----ASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDP 84
           S +P ++PS+ F       N  Y ++   S+ SG   RIP +V K+S E++ IV + DD 
Sbjct: 19  SLVPRYSPSVPFIFRTVVFNRNYNRVFQLSEFSGD--RIPTVVSKASSESDSIVQT-DDS 78

Query: 85  EDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIG 144
           +DGVSLGTMKLPLDTDI RF+ LLFQWANSLCQGANLPLPVPLKVDKIP G RLGFITIG
Sbjct: 79  DDGVSLGTMKLPLDTDIPRFETLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITIG 138

Query: 145 DGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR 202
           DGKTEVLVYIDCLVFPA   S PIFRAIRNG+LKDQ+PPGEPRIMRSLL ALKKSVEI+R
Sbjct: 139 DGKTEVLVYIDCLVFPAAEGSGPIFRAIRNGKLKDQAPPGEPRIMRSLLQALKKSVEIAR 196

[Close]

BLAST of Csa6G452740 vs. NCBI nr
Match: gi|590632371|ref|XP_007027821.1| (Uncharacterized protein TCM_022663 [Theobroma cacao])

HSP 1 Score: 233.0 bits (593), Expect = 4.5e-58
Identity = 120/179 (67.04%), Postives = 139/179 (77.65%), Query Frame = 1


Query: 23  VFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPED 82
           V SS+P     LVF     +    +  S   G  + I KL+ K+S   +DIVP+ DD ED
Sbjct: 45  VISSLP-----LVFLEHKKQRLPFTKLSGHYGQRNLIVKLMGKASAGKDDIVPAADDEED 104

Query: 83  GVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDG 142
           G+SLGTMKLP +TD+ RF+ LLFQWANSLCQGAN+PLP+PLK+DKIP G RLGFITIGDG
Sbjct: 105 GISLGTMKLPSNTDLQRFETLLFQWANSLCQGANVPLPIPLKIDKIPGGARLGFITIGDG 164

Query: 143 KTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 202
           KT+VLVYIDCLVFPAT  S P+FRAIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 165 KTDVLVYIDCLVFPATDGSGPMFRAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 218

[Close]

BLAST of Csa6G452740 vs. NCBI nr
Match: gi|823174436|ref|XP_012485780.1| (PREDICTED: uncharacterized protein LOC105799653 [Gossypium raimondii])

HSP 1 Score: 232.6 bits (592), Expect = 5.9e-58
Identity = 117/155 (75.48%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 47  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 106
           S  S+  G    I KLV K+S   +DI P+ DDPE+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDITPAADDPENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 107 WANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFR 166
           WANSLCQGANLPLPVPLK+DKI  G RLGFIT+GDGKTEVLVYIDC+VFPAT +S PIFR
Sbjct: 105 WANSLCQGANLPLPVPLKIDKIAGGARLGFITVGDGKTEVLVYIDCIVFPATDNSGPIFR 164

Query: 167 AIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 202
           AIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 165 AIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 199

The following BLAST results are available for this feature:

BLAST of Csa6G452740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFD4_CUCSA	2.7e-110	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1	[more]
A0A061EUJ9_THECC	3.1e-58	67.04	Uncharacterized protein OS=Theobroma cacao GN=TCM_022663 PE=4 SV=1	[more]
A0A0D2NT44_GOSRA	4.1e-58	75.48	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1	[more]
A0A0B0PCD0_GOSAR	2.7e-57	75.48	Uncharacterized protein OS=Gossypium arboreum GN=F383_29840 PE=4 SV=1	[more]
B9SWH7_RICCO	4.5e-57	81.16	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0293460 PE=4 SV=1	[more]

BLAST of Csa6G452740 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G36145.1	1.4e-46	65.52	unknown protein	[more]

BLAST of Csa6G452740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451154\|ref\|XP_004143327.1\|	3.9e-110	100.00	PREDICTED: uncharacterized protein LOC101214488 [Cucumis sativus]	[more]
gi\|659125240\|ref\|XP_008462584.1\|	4.2e-104	95.02	PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo]	[more]
gi\|719974756\|ref\|XP_010245745.1\|	8.8e-62	70.72	PREDICTED: uncharacterized protein LOC104589201 [Nelumbo nucifera]	[more]
gi\|590632371\|ref\|XP_007027821.1\|	4.5e-58	67.04	Uncharacterized protein TCM_022663 [Theobroma cacao]	[more]
gi\|823174436\|ref\|XP_012485780.1\|	5.9e-58	75.48	PREDICTED: uncharacterized protein LOC105799653 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0009958	positive gravitropism
biological_process	GO:0008152	metabolic process
biological_process	GO:0006896	Golgi to vacuole transport
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0048364	root development
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0030904	retromer complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0035091	phosphatidylinositol binding
molecular_function	GO:0016740	transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU109410	cucumber EST collection version 3.0	transcribed_cluster
CU138580	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G452740.1	Csa6G452740.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU109410	CU109410	transcribed_cluster
CU138580	CU138580	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36352	FAMILY NOT NAMED	coord: 1..201 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G452740	Cla018408	Watermelon (97103) v1	cuwmB505
Csa6G452740	MELO3C024557	Melon (DHL92) v3.5.1	cumeB508
Csa6G452740	ClCG04G010160	Watermelon (Charleston Gray)	cuwcgB464
Csa6G452740	Lsi01G012120	Bottle gourd (USVL1VR-Ls)	culsiB435
Csa6G452740	MELO3C024557.2	Melon (DHL92) v3.6.1	cumedB487
Csa6G452740	Cla97C04G076980	Watermelon (97103) v2	cuwmbB455
Csa6G452740	Bhi03G001411	Wax gourd	cuwgoB631
Csa6G452740	CSPI06G25590	Wild cucumber (PI 183967)	cpicuB313
Csa6G452740	Cucsa.083500	Cucumber (Gy14) v1	cgycuB082
Csa6G452740	CmaCh07G008460	Cucurbita maxima (Rimu)	cmacuB878
Csa6G452740	CmoCh07G008780	Cucurbita moschata (Rifu)	cmocuB865
Csa6G452740	Cp4.1LG19g04910	Cucurbita pepo (Zucchini)	cpecuB503
Csa6G452740	CsGy6G025030	Cucumber (Gy14) v2	cgybcuB281
Csa6G452740	Carg05358	Silver-seed gourd	carcuB0826

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G452740	Cucurbita moschata (Rifu)	cmocuB253
Csa6G452740	Cucurbita moschata (Rifu)	cmocuB630
Csa6G452740	Cucurbita moschata (Rifu)	cmocuB670
Csa6G452740	Cucurbita moschata (Rifu)	cmocuB828
Csa6G452740	Melon (DHL92) v3.5.1	cumeB484
Csa6G452740	Watermelon (Charleston Gray)	cuwcgB424
Csa6G452740	Watermelon (Charleston Gray)	cuwcgB444
Csa6G452740	Watermelon (97103) v1	cuwmB452
Csa6G452740	Watermelon (97103) v1	cuwmB518
Csa6G452740	Cucurbita pepo (Zucchini)	cpecuB085
Csa6G452740	Cucurbita pepo (Zucchini)	cpecuB624
Csa6G452740	Cucurbita pepo (Zucchini)	cpecuB759
Csa6G452740	Cucurbita pepo (Zucchini)	cpecuB876
Csa6G452740	Bottle gourd (USVL1VR-Ls)	culsiB421
Csa6G452740	Bottle gourd (USVL1VR-Ls)	culsiB445
Csa6G452740	Cucumber (Gy14) v2	cgybcuB137
Csa6G452740	Melon (DHL92) v3.6.1	cumedB464
Csa6G452740	Silver-seed gourd	carcuB0267
Csa6G452740	Silver-seed gourd	carcuB0278
Csa6G452740	Silver-seed gourd	carcuB0943
Csa6G452740	Watermelon (97103) v2	cuwmbB418
Csa6G452740	Watermelon (97103) v2	cuwmbB434
Csa6G452740	Wax gourd	cuwgoB527
Csa6G452740	Wax gourd	cuwgoB614
Csa6G452740	Cucumber (Chinese Long) v2	cucuB110
Csa6G452740	Cucumber (Gy14) v1	cgycuB346
Csa6G452740	Cucurbita maxima (Rimu)	cmacuB267
Csa6G452740	Cucurbita maxima (Rimu)	cmacuB641
Csa6G452740	Cucurbita maxima (Rimu)	cmacuB681
Csa6G452740	Cucurbita maxima (Rimu)	cmacuB840