CU109410 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU109410
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionBnaAnng07610D protein
LocationChr6 : 21640609 .. 21641527 (-)
Sequence length355
The following sequences are available for this feature:

transcribed_cluster sequence

CTAACTTGCCACTTCCAGTGCCTATTTTGTAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATTCACAATTGGAGATGGAAAGACAGAAGTTCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTAGTAGTCCAATTTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTATGAGAAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGAGTTAATATTTGTCTATGTAAATGTACCAAACTTGTCTTTTCTTCTGTCATTAGGTAATGTAAATGACTGTCGGTGAAGGTTCACTC
BLAST of CU109410 vs. TrEMBL
Match: A0A0A0KFD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-10
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV
Sbjct: 166 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 201

Query: 219 267
           
Sbjct: 226 201

BLAST of CU109410 vs. TrEMBL
Match: A0A0A0KFD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.1e-08
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 2

Query: 29  VRLTKYPVELDLVLFTIGDGKTEVLVYIDCLVFPATASSSPIFSSHKKWTLK 88
           +++ K P  + L   TIGDGKTEVLVYIDCLVFPATASSSPIF + +   LK
Sbjct: 123 LKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLK 174

Query: 89  148
           
Sbjct: 183 174

Query: 149 185
           
Sbjct: 243 174


HSP 2 Score: 64.3 bits (155), Expect = 1.1e-07
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 164 RAIRNGTLKDQSPPGEPRIMRSLLQALQKSVEIARV 199

Query: 219 267
           
Sbjct: 224 199

BLAST of CU109410 vs. TrEMBL
Match: A0A0B0PCD0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_29840 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.7e-06
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 2

Query: 62  LVLFTIGDGKTEVLVYIDCLVFPATASSSPIFSSHKKWTLK 121
           L   T+GDGKTEVLVYIDCLVFPAT +S PIF + +  TLK
Sbjct: 132 LGFITVGDGKTEVLVYIDCLVFPATDNSGPIFRAIRNGTLK 172

Query: 122 181
           
Sbjct: 192 172

Query: 182 185
           
Sbjct: 252 172


HSP 2 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RA+RNG LKDQ+PPGEPRIMRSL+GALKKS+EI+++
Sbjct: 165 RALRNGPLKDQAPPGEPRIMRSLMGALKKSIEIAKI 200

Query: 219 267
           
Sbjct: 225 200

BLAST of CU109410 vs. TrEMBL
Match: W1PZL7_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00040p00113110 PE=4 SV=1)

HSP 1 Score: 40.4 bits (93), Expect = 1.7e+00
Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 2

Query: 80  GDGKTEVLVYIDCLVFPAT-ASSSPIFSSHKKWTLK 139
           GDG TE   YIDCL+FPAT  +S PIF + +   LK
Sbjct: 138 GDGSTEDYAYIDCLIFPATEENSGPIFRALRNGPLK 173

Query: 140 185
           
Sbjct: 198 173


HSP 2 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 164 RAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 199

Query: 219 267
           
Sbjct: 224 199

BLAST of CU109410 vs. TrEMBL
Match: A0A0D2NT44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-05
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 2

Query: 62  LVLFTIGDGKTEVLVYIDCLVFPATASSSPIFSSHKKWTLK 121
           L   T+GDGKTEVLVYIDC+VFPAT +S PIF + +   LK
Sbjct: 132 LGFITVGDGKTEVLVYIDCIVFPATDNSGPIFRAIRNGPLK 172

Query: 122 181
           
Sbjct: 192 172

Query: 182 185
           
Sbjct: 252 172


HSP 2 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 183 RAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 218

Query: 219 267
           
Sbjct: 243 218

BLAST of CU109410 vs. NCBI nr
Match: gi|449451154|ref|XP_004143327.1| (PREDICTED: uncharacterized protein LOC101214488 [Cucumis sativus])

HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV
Sbjct: 166 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 201

Query: 219 267
           
Sbjct: 226 201

BLAST of CU109410 vs. NCBI nr
Match: gi|659125240|ref|XP_008462584.1| (PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV
Sbjct: 166 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 201

Query: 219 267
           
Sbjct: 226 201

BLAST of CU109410 vs. NCBI nr
Match: gi|719974756|ref|XP_010245745.1| (PREDICTED: uncharacterized protein LOC104589201 [Nelumbo nucifera])

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-08
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNG+LKDQ+PPGEPRIMRSLL ALKKSVEI+RV
Sbjct: 161 RAIRNGKLKDQAPPGEPRIMRSLLQALKKSVEIARV 196

Query: 219 267
           
Sbjct: 221 196

BLAST of CU109410 vs. NCBI nr
Match: gi|728843137|gb|KHG22580.1| (hypothetical protein F383_29840 [Gossypium arboreum])

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-07
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RAIRNG LKDQSPPGEPRIMRSLL AL+KSVEI+RV
Sbjct: 164 RAIRNGTLKDQSPPGEPRIMRSLLQALQKSVEIARV 199

Query: 219 267
           
Sbjct: 224 199

BLAST of CU109410 vs. NCBI nr
Match: gi|769803430|ref|XP_006851459.2| (PREDICTED: uncharacterized protein LOC18441278 isoform X1 [Amborella trichopoda])

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-07
Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 3

Query: 159 RAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV 218
           RA+RNG LKDQ+PPGEPRIMRSL+GALKKS+EI+++
Sbjct: 167 RALRNGPLKDQAPPGEPRIMRSLMGALKKSIEIAKI 202

Query: 219 267
           
Sbjct: 227 202

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KFD4_CUCSA4.1e-10100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1[more]
A0A0A0KFD4_CUCSA5.1e-0863.46Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1[more]
A0A0B0PCD0_GOSAR4.7e-0668.29Uncharacterized protein OS=Gossypium arboreum GN=F383_29840 PE=4 SV=1[more]
W1PZL7_AMBTC1.7e+0055.56Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00040p00113110 PE=4 SV=... [more]
A0A0D2NT44_GOSRA4.0e-0563.41Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449451154|ref|XP_004143327.1|5.9e-10100.00PREDICTED: uncharacterized protein LOC101214488 [Cucumis sativus][more]
gi|659125240|ref|XP_008462584.1|5.9e-10100.00PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo][more]
gi|719974756|ref|XP_010245745.1|5.5e-0888.89PREDICTED: uncharacterized protein LOC104589201 [Nelumbo nucifera][more]
gi|728843137|gb|KHG22580.1|1.6e-0788.89hypothetical protein F383_29840 [Gossypium arboreum][more]
gi|769803430|ref|XP_006851459.2|2.1e-0777.78PREDICTED: uncharacterized protein LOC18441278 isoform X1 [Amborella trichopoda][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G452740Csa6G452740gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L5JN1FKNP3UI02L5JN1EST
H0121663H0121663EST