CU138580 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU138580
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 21641634 .. 21641863 (+)
Sequence length236
The following sequences are available for this feature:

transcribed_cluster sequence

GGGGGAGTTTTGACCTACCTGGAAGAGTAGGACCTGAAACCTAGCAATGTCAGTGTCCAAAGGCAATTTCATAGTCCCAAGGGATACTCCATCTTCAGGGTCATCTTCTGAGGGCACAATGTCGTTGTTCTCATCCGAAGACTTGGGCACCAGCTTGGGAATCCTGTGGCATGGACCTGAGACTTGGGAGAAATTGGAGATTTGGCGATACCGAGTGTTGGAAGCGAAGAAAACCA
Library categoryESTs
gynoecious flower library1
BLAST of CU138580 vs. TrEMBL
Match: A0A0A0KFD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = -3

Query: 19  VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD 78
           VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD
Sbjct: 35  VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD 94

Query: 79  TDIARFQVLLFQ 138
           TDIARFQVLLFQ
Sbjct: 95  TDIARFQVLLFQ 106

Query: 139 198
           
Sbjct: 155 106

Query: 199 235
           
Sbjct: 215 106

BLAST of CU138580 vs. TrEMBL
Match: A0A0D2NT44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -3

Query: 19  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 78
           S  S+  G    I KLV K+S   +DI P+ DDPE+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDITPAADDPENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 79  138
           
Sbjct: 105 104

Query: 139 198
           
Sbjct: 165 104

BLAST of CU138580 vs. TrEMBL
Match: A0A0D2QAJ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -3

Query: 19  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 78
           S  S+  G    I KLV K+S   +DI P+ DDPE+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDITPAADDPENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 79  138
           
Sbjct: 105 104

Query: 139 198
           
Sbjct: 165 104

BLAST of CU138580 vs. TrEMBL
Match: A0A0D2RWU2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -3

Query: 19  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 78
           S  S+  G    I KLV K+S   +DI P+ DDPE+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDITPAADDPENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 79  138
           
Sbjct: 105 104

Query: 139 198
           
Sbjct: 165 104

BLAST of CU138580 vs. TrEMBL
Match: M5VR68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011731mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-08
Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = -3

Query: 19  SGPCHRIPKLVPK--SSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 78
           SG CHR  +  P   S +E N +VPS DD EDGV LGTMKLP DTD+ RFQ+LLFQ
Sbjct: 50  SGHCHRPNQTTPARASYEERNSLVPS-DDAEDGVLLGTMKLPSDTDVPRFQILLFQ 104

Query: 79  138
           
Sbjct: 110 104

Query: 139 181
           
Sbjct: 170 104

BLAST of CU138580 vs. NCBI nr
Match: gi|449451154|ref|XP_004143327.1| (PREDICTED: uncharacterized protein LOC101214488 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 7.4e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = -3

Query: 19  VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD 78
           VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD
Sbjct: 35  VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD 94

Query: 79  TDIARFQVLLFQ 138
           TDIARFQVLLFQ
Sbjct: 95  TDIARFQVLLFQ 106

Query: 139 198
           
Sbjct: 155 106

Query: 199 235
           
Sbjct: 215 106

BLAST of CU138580 vs. NCBI nr
Match: gi|659125240|ref|XP_008462584.1| (PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo])

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-29
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = -3

Query: 19  VFFASNTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD 78
           VFFASNTR+RQIS FSQ SGPCHRI  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD
Sbjct: 35  VFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD 94

Query: 79  TDIARFQVLLFQ 138
           TDIARFQVLLFQ
Sbjct: 95  TDIARFQVLLFQ 106

Query: 139 198
           
Sbjct: 155 106

Query: 199 235
           
Sbjct: 215 106

BLAST of CU138580 vs. NCBI nr
Match: gi|719974756|ref|XP_010245745.1| (PREDICTED: uncharacterized protein LOC104589201 [Nelumbo nucifera])

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-09
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = -3

Query: 19  NTRYRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIAR 78
           N  Y ++   S+ SG   RIP +V K+S E++ IV + DD +DGVSLGTMKLPLDTDI R
Sbjct: 38  NRNYNRVFQLSEFSGD--RIPTVVSKASSESDSIVQT-DDSDDGVSLGTMKLPLDTDIPR 97

Query: 79  FQVLLFQ 138
           F+ LLFQ
Sbjct: 98  FETLLFQ 101

Query: 139 198
           
Sbjct: 158 101

Query: 199 220
           
Sbjct: 218 101

BLAST of CU138580 vs. NCBI nr
Match: gi|645276909|ref|XP_008243513.1| (PREDICTED: uncharacterized protein LOC103341746 [Prunus mume])

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-08
Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = -3

Query: 19  SGPCHRIPKLVPK--SSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 78
           SG CHR  K  P   S +E N +VPS DD EDGV LGTMKLP DTD+ RFQ+LLFQ
Sbjct: 50  SGHCHRPNKTTPARASYEERNSLVPS-DDAEDGVLLGTMKLPSDTDVPRFQILLFQ 104

Query: 79  138
           
Sbjct: 110 104

Query: 139 181
           
Sbjct: 170 104

BLAST of CU138580 vs. NCBI nr
Match: gi|763769118|gb|KJB36333.1| (hypothetical protein B456_006G153100 [Gossypium raimondii])

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -3

Query: 19  SNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQ 78
           S  S+  G    I KLV K+S   +DI P+ DDPE+GVSLGTMKLP +TDI RF+ LLFQ
Sbjct: 45  SKLSRFYGHRSLIVKLVGKASPGKDDITPAADDPENGVSLGTMKLPSNTDIQRFETLLFQ 104

Query: 79  138
           
Sbjct: 105 104

Query: 139 198
           
Sbjct: 165 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KFD4_CUCSA3.0e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452740 PE=4 SV=1[more]
A0A0D2NT44_GOSRA1.2e-0858.33Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1[more]
A0A0D2QAJ7_GOSRA1.2e-0858.33Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1[more]
A0A0D2RWU2_GOSRA1.2e-0858.33Uncharacterized protein OS=Gossypium raimondii GN=B456_006G153100 PE=4 SV=1[more]
M5VR68_PRUPE2.6e-0862.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011731mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449451154|ref|XP_004143327.1|7.4e-33100.00PREDICTED: uncharacterized protein LOC101214488 [Cucumis sativus][more]
gi|659125240|ref|XP_008462584.1|1.7e-2993.06PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo][more]
gi|719974756|ref|XP_010245745.1|2.0e-0956.72PREDICTED: uncharacterized protein LOC104589201 [Nelumbo nucifera][more]
gi|645276909|ref|XP_008243513.1|2.8e-0864.29PREDICTED: uncharacterized protein LOC103341746 [Prunus mume][more]
gi|763769118|gb|KJB36333.1|3.7e-0858.33hypothetical protein B456_006G153100 [Gossypium raimondii][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G452740Csa6G452740gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0051719G0051719EST