Csa6G450950 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G450950
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 21454053 .. 21454430 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTAAGCTCACCAGCCTTGTTGTAAGGAGGGCATGCATGGCTTATGGAGTTGGAGCATGTGACTTTAATAGCGTCTGTAATATTATATCTATTTTCACTTAATTCAAGCTGTGATTTTATGATCTTATTTTGATTATTGTGATATATGTTTTGAGCAATTCGAAGGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCAGTAATTGTCCTACGGCGCTATGCGTGGTGTTGTAAGATAGAAGAGATTATTATTCACGAAAATGATGTGGCACCATCTCCGAGTGTCACGGTACTCTAA

mRNA sequence

ATGGGTTTTAAGCTCACCAGCCTTGTTGTAAGGAGGGCATGCATGGCTTATGGAGTTGGAGCATGTGACTTTAATAGCGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCAGTAATTGTCCTACGGCGCTATGCGTGGTGTTGTAAGATAGAAGAGATTATTATTCACGAAAATGATGTGGCACCATCTCCGAGTGTCACGGTACTCTAA

Coding sequence (CDS)

ATGGGTTTTAAGCTCACCAGCCTTGTTGTAAGGAGGGCATGCATGGCTTATGGAGTTGGAGCATGTGACTTTAATAGCGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCAGTAATTGTCCTACGGCGCTATGCGTGGTGTTGTAAGATAGAAGAGATTATTATTCACGAAAATGATGTGGCACCATCTCCGAGTGTCACGGTACTCTAA

Protein sequence

MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSRSAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL*
Homology
[Close]
BLAST of Csa6G450950 vs. TrEMBL
Match: A0A0A0KKF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G450950 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1 

Query: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60
          MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR
Sbjct: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60

Query: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 95
          SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL
Sbjct: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 94

[Close]
BLAST of Csa6G450950 vs. NCBI nr
Match: gi|700193037|gb|KGN48241.1| (hypothetical protein Csa_6G450950 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1 

Query: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60
          MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR
Sbjct: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60

Query: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 95
          SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL
Sbjct: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 94

The following BLAST results are available for this feature:
BLAST of Csa6G450950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKF0_CUCSA1.3e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G450950 PE=4 SV=1[more]
BLAST of Csa6G450950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193037|gb|KGN48241.1|1.9e-46100.00hypothetical protein Csa_6G450950 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G450950.1Csa6G450950.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G450950CSPI06G25290Wild cucumber (PI 183967)cpicuB313
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G450950Cucurbita pepo (Zucchini)cpecuB085
Csa6G450950Cucurbita pepo (Zucchini)cpecuB503
Csa6G450950Cucurbita pepo (Zucchini)cpecuB624
Csa6G450950Cucurbita pepo (Zucchini)cpecuB759
Csa6G450950Cucurbita pepo (Zucchini)cpecuB876
Csa6G450950Bottle gourd (USVL1VR-Ls)culsiB421
Csa6G450950Bottle gourd (USVL1VR-Ls)culsiB435
Csa6G450950Bottle gourd (USVL1VR-Ls)culsiB445
Csa6G450950Cucumber (Gy14) v2cgybcuB137
Csa6G450950Cucumber (Gy14) v2cgybcuB281
Csa6G450950Cucumber (Gy14) v2cgybcuB284
Csa6G450950Melon (DHL92) v3.6.1cumedB411
Csa6G450950Melon (DHL92) v3.6.1cumedB464
Csa6G450950Melon (DHL92) v3.6.1cumedB487
Csa6G450950Silver-seed gourdcarcuB0167
Csa6G450950Silver-seed gourdcarcuB0267
Csa6G450950Silver-seed gourdcarcuB0278
Csa6G450950Silver-seed gourdcarcuB0825
Csa6G450950Silver-seed gourdcarcuB0826
Csa6G450950Silver-seed gourdcarcuB0943
Csa6G450950Watermelon (97103) v2cuwmbB418
Csa6G450950Watermelon (97103) v2cuwmbB434
Csa6G450950Watermelon (97103) v2cuwmbB455
Csa6G450950Wax gourdcuwgoB529
Csa6G450950Wax gourdcuwgoB614
Csa6G450950Wax gourdcuwgoB629
Csa6G450950Cucumber (Chinese Long) v2cucuB110
Csa6G450950Cucumber (Chinese Long) v2cucuB168
Csa6G450950Cucumber (Gy14) v1cgycuB082
Csa6G450950Cucumber (Gy14) v1cgycuB542
Csa6G450950Cucurbita maxima (Rimu)cmacuB267
Csa6G450950Cucurbita maxima (Rimu)cmacuB641
Csa6G450950Cucurbita maxima (Rimu)cmacuB681
Csa6G450950Cucurbita maxima (Rimu)cmacuB840
Csa6G450950Cucurbita maxima (Rimu)cmacuB878
Csa6G450950Cucurbita moschata (Rifu)cmocuB253
Csa6G450950Cucurbita moschata (Rifu)cmocuB630
Csa6G450950Cucurbita moschata (Rifu)cmocuB670
Csa6G450950Cucurbita moschata (Rifu)cmocuB828
Csa6G450950Cucurbita moschata (Rifu)cmocuB865
Csa6G450950Melon (DHL92) v3.5.1cumeB437
Csa6G450950Melon (DHL92) v3.5.1cumeB484
Csa6G450950Melon (DHL92) v3.5.1cumeB508
Csa6G450950Watermelon (Charleston Gray)cuwcgB424
Csa6G450950Watermelon (Charleston Gray)cuwcgB444
Csa6G450950Watermelon (Charleston Gray)cuwcgB464
Csa6G450950Watermelon (97103) v1cuwmB452
Csa6G450950Watermelon (97103) v1cuwmB505
Csa6G450950Watermelon (97103) v1cuwmB518