Csa6G445100 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G445100
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Aquaporin PIP2; contains IPR000425 (Major intrinsic protein), IPR023271 (Aquaporin-like)
Location	Chr6 : 20704805 .. 20705144 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCATATATAGTTAGCAATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCCCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

mRNA sequence

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCCCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

Coding sequence (CDS)

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCCCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

Protein sequence

MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV*

Homology

[Close]

BLAST of Csa6G445100 vs. Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.6e-30
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD EEL +WS YRAVIAEF+ATLLFLYV VLTVIG 
Sbjct: 1   MAKDVEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100 vs. Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-30
Identity = 70/105 (66.67%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 1   MSKDLD------PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KDLD      PA    DY D PPAPFFD EEL +W  YRAVIAEF+ATLLFLYV +LT
Sbjct: 1   MAKDLDVNESGPPA--ARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILT 60

Query: 61  VIGSQSQDSAAV----CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG ++Q  A      CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61  VIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISG 103

[Close]

BLAST of Csa6G445100 vs. Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-29
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD +EL +WS YRAVIAEF+ATLLFLY+ VLTVIG 
Sbjct: 1   MAKDVEGPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100 vs. Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-29
Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 1   MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

[Close]

BLAST of Csa6G445100 vs. Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.8e-29
Identity = 66/107 (61.68%), Postives = 73/107 (68.22%), Query Frame = 1


Query: 1   MSKDLDPAFPTG------DYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KD++ + P G      DY D PPAP  D EEL +WS YRAVIAEFIATLLFLY+ V T
Sbjct: 1   MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60

Query: 61  VIGSQSQDSA------AVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG + Q  A      A C GVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  VIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISG 107

[Close]

BLAST of Csa6G445100 vs. TrEMBL
Match: A0A0A0KEN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445100 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.0e-55
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
           MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 107
           QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV
Sbjct: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 106

[Close]

BLAST of Csa6G445100 vs. TrEMBL
Match: M5WC90_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009689mg PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-31
Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFDPEEL +WSFYRA+IAEF+ATLLFLY+ VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDPEELTKWSFYRALIAEFVATLLFLYITVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100 vs. TrEMBL
Match: A4UR73_9ROSA (Aquaporin PIP2 OS=Prunus humilis GN=pip2 PE=3 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-31
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFD EEL +WSFYRA+IAEF+ATLLFLYV VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDAEELTKWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100 vs. TrEMBL
Match: A0A0S2PIB5_9ROSA (Aquaporin (Fragment) OS=Malus zumi GN=PIP2;1 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-31
Identity = 70/99 (70.71%), Postives = 77/99 (77.78%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    FP  DY D PPAP FDP EL +WSFYRA+IAEF+ATLLFLYV VLTVI
Sbjct: 1  MAKDMEVAERGSFPAKDYHDPPPAPLFDPAELAKWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ     CGGVG  GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQTELDNCGGVGTLGIAWAFGGVIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100 vs. TrEMBL
Match: A0A0U2X1B7_9ROSA (Aquaporin PIP 2.3 OS=Prunus cerasifera x Prunus munsoniana PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.6e-31
Identity = 69/99 (69.70%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFD EEL +WSFYRA+IAEF+ATLLFLY+ VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDAEELTKWSFYRALIAEFVATLLFLYITVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100 vs. TAIR10
Match: AT2G37180.1 (AT2G37180.1 Aquaporin-like superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-31
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD EEL +WS YRAVIAEF+ATLLFLYV VLTVIG 
Sbjct: 1   MAKDVEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100 vs. TAIR10
Match: AT5G60660.1 (AT5G60660.1 plasma membrane intrinsic protein 2;4)

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-31
Identity = 70/105 (66.67%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 1   MSKDLD------PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KDLD      PA    DY D PPAPFFD EEL +W  YRAVIAEF+ATLLFLYV +LT
Sbjct: 1   MAKDLDVNESGPPA--ARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILT 60

Query: 61  VIGSQSQDSAAV----CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG ++Q  A      CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61  VIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISG 103

[Close]

BLAST of Csa6G445100 vs. TAIR10
Match: AT2G37170.1 (AT2G37170.1 plasma membrane intrinsic protein 2)

HSP 1 Score: 130.6 bits (327), Expect = 5.9e-31
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD +EL +WS YRAVIAEF+ATLLFLY+ VLTVIG 
Sbjct: 1   MAKDVEGPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100 vs. TAIR10
Match: AT3G53420.1 (AT3G53420.1 plasma membrane intrinsic protein 2A)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-30
Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 1   MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

[Close]

BLAST of Csa6G445100 vs. TAIR10
Match: AT3G54820.1 (AT3G54820.1 plasma membrane intrinsic protein 2;5)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-28
Identity = 62/92 (67.39%), Postives = 68/92 (73.91%), Query Frame = 1


Query: 8   AFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQSQDSAAV- 67
           +F   DY D PP P FD  EL +WSFYRA+IAEFIATLLFLYV ++TVIG +SQ   A+ 
Sbjct: 11  SFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALN 70

Query: 68  ---CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              C GVGV GIAWAFGG IF+LVYCTAGISG
Sbjct: 71  PDQCTGVGVLGIAWAFGGMIFILVYCTAGISG 102

[Close]

BLAST of Csa6G445100 vs. NCBI nr
Match: gi|700192941|gb|KGN48145.1| (hypothetical protein Csa_6G445100 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 7.2e-55
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
           MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 107
           QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV
Sbjct: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 106

[Close]

BLAST of Csa6G445100 vs. NCBI nr
Match: gi|778717077|ref|XP_004143247.2| (PREDICTED: aquaporin PIP2-2-like [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of Csa6G445100 vs. NCBI nr
Match: gi|659096733|ref|XP_008449258.1| (PREDICTED: aquaporin PIP2-2-like [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 9.4e-47
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDP FPTGDYFDHPPAPFFD EELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPGFPTGDYFDHPPAPFFDSEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of Csa6G445100 vs. NCBI nr
Match: gi|595827182|ref|XP_007205689.1| (hypothetical protein PRUPE_ppa009689mg [Prunus persica])

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-31
Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFDPEEL +WSFYRA+IAEF+ATLLFLY+ VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDPEELTKWSFYRALIAEFVATLLFLYITVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100 vs. NCBI nr
Match: gi|148467570|gb|ABO69705.2| (aquaporin PIP2 [Prunus humilis])

HSP 1 Score: 141.4 bits (355), Expect = 9.5e-31
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFD EEL +WSFYRA+IAEF+ATLLFLYV VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDAEELTKWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

The following BLAST results are available for this feature:

BLAST of Csa6G445100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIP23_ARATH	3.6e-30	66.34	Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1	[more]
PIP24_ARATH	6.1e-30	66.67	Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1	[more]
PIP22_ARATH	1.0e-29	64.36	Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2	[more]
PIP21_ARATH	1.8e-29	66.02	Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1	[more]
PIP22_ORYSJ	6.8e-29	61.68	Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1	[more]

BLAST of Csa6G445100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEN2_CUCSA	5.0e-55	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445100 PE=3 SV=1	[more]
M5WC90_PRUPE	1.0e-31	70.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009689mg PE=3 SV=1	[more]
A4UR73_9ROSA	6.6e-31	70.71	Aquaporin PIP2 OS=Prunus humilis GN=pip2 PE=3 SV=2	[more]
A0A0S2PIB5_9ROSA	6.6e-31	70.71	Aquaporin (Fragment) OS=Malus zumi GN=PIP2;1 PE=2 SV=1	[more]
A0A0U2X1B7_9ROSA	8.6e-31	69.70	Aquaporin PIP 2.3 OS=Prunus cerasifera x Prunus munsoniana PE=2 SV=1	[more]

BLAST of Csa6G445100 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37180.1	2.0e-31	66.34	Aquaporin-like superfamily protein	[more]
AT5G60660.1	3.5e-31	66.67	plasma membrane intrinsic protein 2;4	[more]
AT2G37170.1	5.9e-31	64.36	plasma membrane intrinsic protein 2	[more]
AT3G53420.1	1.0e-30	66.02	plasma membrane intrinsic protein 2A	[more]
AT3G54820.1	1.2e-28	67.39	plasma membrane intrinsic protein 2;5	[more]

BLAST of Csa6G445100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192941\|gb\|KGN48145.1\|	7.2e-55	100.00	hypothetical protein Csa_6G445100 [Cucumis sativus]	[more]
gi\|778717077\|ref\|XP_004143247.2\|	3.8e-48	100.00	PREDICTED: aquaporin PIP2-2-like [Cucumis sativus]	[more]
gi\|659096733\|ref\|XP_008449258.1\|	9.4e-47	97.89	PREDICTED: aquaporin PIP2-2-like [Cucumis melo]	[more]
gi\|595827182\|ref\|XP_007205689.1\|	1.5e-31	70.71	hypothetical protein PRUPE_ppa009689mg [Prunus persica]	[more]
gi\|148467570\|gb\|ABO69705.2\|	9.5e-31	70.71	aquaporin PIP2 [Prunus humilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000425	MIP
IPR023271	Aquaporin-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0015992	proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0016471	vacuolar proton-transporting V-type ATPase complex
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0016820	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G445100.1	Csa6G445100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PRINTS	PR00783	MINTRINSICP	coord: 79..103 score: 1.9E-11coord: 35..54 score: 1.9
IPR000425	Major intrinsic protein	PANTHER	PTHR19139	AQUAPORIN TRANSPORTER	coord: 13..95 score: 1.7
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 29..95 score: 1.3
IPR023271	Aquaporin-like	GENE3D	G3DSA:1.20.1080.10		coord: 13..95 score: 5.4
IPR023271	Aquaporin-like	unknown	SSF81338	Aquaporin-like	coord: 26..95 score: 3.14
None	No IPR available	PANTHER	PTHR19139:SF153	AQUAPORIN PIP1-1-RELATED	coord: 13..95 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G445100	Cla008742	Watermelon (97103) v1	cuwmB518
Csa6G445100	MELO3C014243	Melon (DHL92) v3.5.1	cumeB490
Csa6G445100	Lsi01G013460	Bottle gourd (USVL1VR-Ls)	culsiB435
Csa6G445100	Cla97C04G075660	Watermelon (97103) v2	cuwmbB455
Csa6G445100	CSPI06G24320	Wild cucumber (PI 183967)	cpicuB313
Csa6G445100	CmaCh06G003750	Cucurbita maxima (Rimu)	cmacuB840
Csa6G445100	CmoCh06G003710	Cucurbita moschata (Rifu)	cmocuB828
Csa6G445100	Cp4.1LG19g04020	Cucurbita pepo (Zucchini)	cpecuB503

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G445100	Silver-seed gourd	carcuB0181
Csa6G445100	Silver-seed gourd	carcuB0278
Csa6G445100	Silver-seed gourd	carcuB0450
Csa6G445100	Silver-seed gourd	carcuB0579
Csa6G445100	Watermelon (97103) v2	cuwmbB418
Csa6G445100	Watermelon (97103) v2	cuwmbB434
Csa6G445100	Wax gourd	cuwgoB529
Csa6G445100	Wax gourd	cuwgoB624
Csa6G445100	Cucumber (Chinese Long) v2	cucuB109
Csa6G445100	Cucumber (Chinese Long) v2	cucuB168
Csa6G445100	Cucumber (Gy14) v1	cgycuB167
Csa6G445100	Cucumber (Gy14) v1	cgycuB439
Csa6G445100	Cucumber (Gy14) v1	cgycuB542
Csa6G445100	Cucurbita maxima (Rimu)	cmacuB267
Csa6G445100	Cucurbita maxima (Rimu)	cmacuB561
Csa6G445100	Cucurbita maxima (Rimu)	cmacuB681
Csa6G445100	Cucurbita maxima (Rimu)	cmacuB878
Csa6G445100	Cucurbita moschata (Rifu)	cmocuB253
Csa6G445100	Cucurbita moschata (Rifu)	cmocuB670
Csa6G445100	Cucurbita moschata (Rifu)	cmocuB865
Csa6G445100	Melon (DHL92) v3.5.1	cumeB484
Csa6G445100	Watermelon (Charleston Gray)	cuwcgB424
Csa6G445100	Watermelon (Charleston Gray)	cuwcgB444
Csa6G445100	Watermelon (Charleston Gray)	cuwcgB464
Csa6G445100	Watermelon (97103) v1	cuwmB452
Csa6G445100	Watermelon (97103) v1	cuwmB505
Csa6G445100	Cucurbita pepo (Zucchini)	cpecuB085
Csa6G445100	Cucurbita pepo (Zucchini)	cpecuB296
Csa6G445100	Cucurbita pepo (Zucchini)	cpecuB624
Csa6G445100	Bottle gourd (USVL1VR-Ls)	culsiB445
Csa6G445100	Cucumber (Gy14) v2	cgybcuB137
Csa6G445100	Cucumber (Gy14) v2	cgybcuB281
Csa6G445100	Cucumber (Gy14) v2	cgybcuB284
Csa6G445100	Melon (DHL92) v3.6.1	cumedB411
Csa6G445100	Melon (DHL92) v3.6.1	cumedB470
Csa6G445100	Melon (DHL92) v3.6.1	cumedB464