Csa6G445100.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G445100.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Aquaporin PIP2; contains IPR000425 (Major intrinsic protein), IPR023271 (Aquaporin-like)
Location	Chr6 : 20704805 .. 20705144 (-)
Sequence length	321

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCATATATAGTTAGCAATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCCCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

mRNA sequence

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCCCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

Coding sequence (CDS)

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCCCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

Protein sequence

MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV*

Homology

[Close]

BLAST of Csa6G445100.1 vs. Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.6e-30
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD EEL +WS YRAVIAEF+ATLLFLYV VLTVIG 
Sbjct: 1   MAKDVEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100.1 vs. Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-30
Identity = 70/105 (66.67%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 1   MSKDLD------PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KDLD      PA    DY D PPAPFFD EEL +W  YRAVIAEF+ATLLFLYV +LT
Sbjct: 1   MAKDLDVNESGPPA--ARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILT 60

Query: 61  VIGSQSQDSAAV----CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG ++Q  A      CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61  VIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISG 103

[Close]

BLAST of Csa6G445100.1 vs. Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-29
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD +EL +WS YRAVIAEF+ATLLFLY+ VLTVIG 
Sbjct: 1   MAKDVEGPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100.1 vs. Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-29
Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 1   MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

[Close]

BLAST of Csa6G445100.1 vs. Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.8e-29
Identity = 66/107 (61.68%), Postives = 73/107 (68.22%), Query Frame = 1


Query: 1   MSKDLDPAFPTG------DYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KD++ + P G      DY D PPAP  D EEL +WS YRAVIAEFIATLLFLY+ V T
Sbjct: 1   MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60

Query: 61  VIGSQSQDSA------AVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG + Q  A      A C GVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  VIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISG 107

[Close]

BLAST of Csa6G445100.1 vs. TrEMBL
Match: A0A0A0KEN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445100 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.0e-55
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
           MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 107
           QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV
Sbjct: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 106

[Close]

BLAST of Csa6G445100.1 vs. TrEMBL
Match: M5WC90_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009689mg PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-31
Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFDPEEL +WSFYRA+IAEF+ATLLFLY+ VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDPEELTKWSFYRALIAEFVATLLFLYITVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100.1 vs. TrEMBL
Match: A4UR73_9ROSA (Aquaporin PIP2 OS=Prunus humilis GN=pip2 PE=3 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-31
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFD EEL +WSFYRA+IAEF+ATLLFLYV VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDAEELTKWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100.1 vs. TrEMBL
Match: A0A0S2PIB5_9ROSA (Aquaporin (Fragment) OS=Malus zumi GN=PIP2;1 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-31
Identity = 70/99 (70.71%), Postives = 77/99 (77.78%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    FP  DY D PPAP FDP EL +WSFYRA+IAEF+ATLLFLYV VLTVI
Sbjct: 1  MAKDMEVAERGSFPAKDYHDPPPAPLFDPAELAKWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ     CGGVG  GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQTELDNCGGVGTLGIAWAFGGVIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100.1 vs. TrEMBL
Match: A0A0U2X1B7_9ROSA (Aquaporin PIP 2.3 OS=Prunus cerasifera x Prunus munsoniana PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.6e-31
Identity = 69/99 (69.70%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFD EEL +WSFYRA+IAEF+ATLLFLY+ VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDAEELTKWSFYRALIAEFVATLLFLYITVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100.1 vs. TAIR10
Match: AT2G37180.1 (AT2G37180.1 Aquaporin-like superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-31
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD EEL +WS YRAVIAEF+ATLLFLYV VLTVIG 
Sbjct: 1   MAKDVEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100.1 vs. TAIR10
Match: AT5G60660.1 (AT5G60660.1 plasma membrane intrinsic protein 2;4)

HSP 1 Score: 131.3 bits (329), Expect = 3.5e-31
Identity = 70/105 (66.67%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 1   MSKDLD------PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KDLD      PA    DY D PPAPFFD EEL +W  YRAVIAEF+ATLLFLYV +LT
Sbjct: 1   MAKDLDVNESGPPA--ARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILT 60

Query: 61  VIGSQSQDSAAV----CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG ++Q  A      CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61  VIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISG 103

[Close]

BLAST of Csa6G445100.1 vs. TAIR10
Match: AT2G37170.1 (AT2G37170.1 plasma membrane intrinsic protein 2)

HSP 1 Score: 130.6 bits (327), Expect = 5.9e-31
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD +EL +WS YRAVIAEF+ATLLFLY+ VLTVIG 
Sbjct: 1   MAKDVEGPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of Csa6G445100.1 vs. TAIR10
Match: AT3G53420.1 (AT3G53420.1 plasma membrane intrinsic protein 2A)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-30
Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 1   MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

[Close]

BLAST of Csa6G445100.1 vs. TAIR10
Match: AT3G54820.1 (AT3G54820.1 plasma membrane intrinsic protein 2;5)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-28
Identity = 62/92 (67.39%), Postives = 68/92 (73.91%), Query Frame = 1


Query: 8   AFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQSQDSAAV- 67
           +F   DY D PP P FD  EL +WSFYRA+IAEFIATLLFLYV ++TVIG +SQ   A+ 
Sbjct: 11  SFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALN 70

Query: 68  ---CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              C GVGV GIAWAFGG IF+LVYCTAGISG
Sbjct: 71  PDQCTGVGVLGIAWAFGGMIFILVYCTAGISG 102

[Close]

BLAST of Csa6G445100.1 vs. NCBI nr
Match: gi|700192941|gb|KGN48145.1| (hypothetical protein Csa_6G445100 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 7.2e-55
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
           MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 107
           QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV
Sbjct: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 106

[Close]

BLAST of Csa6G445100.1 vs. NCBI nr
Match: gi|778717077|ref|XP_004143247.2| (PREDICTED: aquaporin PIP2-2-like [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of Csa6G445100.1 vs. NCBI nr
Match: gi|659096733|ref|XP_008449258.1| (PREDICTED: aquaporin PIP2-2-like [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 9.4e-47
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDP FPTGDYFDHPPAPFFD EELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPGFPTGDYFDHPPAPFFDSEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of Csa6G445100.1 vs. NCBI nr
Match: gi|595827182|ref|XP_007205689.1| (hypothetical protein PRUPE_ppa009689mg [Prunus persica])

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-31
Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFDPEEL +WSFYRA+IAEF+ATLLFLY+ VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDPEELTKWSFYRALIAEFVATLLFLYITVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

[Close]

BLAST of Csa6G445100.1 vs. NCBI nr
Match: gi|148467570|gb|ABO69705.2| (aquaporin PIP2 [Prunus humilis])

HSP 1 Score: 141.4 bits (355), Expect = 9.5e-31
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSKDLDPA----FPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          M+KD++ A    F   DY D PP PFFD EEL +WSFYRA+IAEF+ATLLFLYV VLTVI
Sbjct: 1  MAKDVEGAEHGEFAAKDYHDPPPTPFFDAEELTKWSFYRALIAEFVATLLFLYVTVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G +SQ S   CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61 GYKSQSSGDQCGGVGILGIAWAFGGMIFVLVYCTAGISG 99

The following BLAST results are available for this feature:

BLAST of Csa6G445100.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIP23_ARATH	3.6e-30	66.34	Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1	[more]
PIP24_ARATH	6.1e-30	66.67	Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1	[more]
PIP22_ARATH	1.0e-29	64.36	Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2	[more]
PIP21_ARATH	1.8e-29	66.02	Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1	[more]
PIP22_ORYSJ	6.8e-29	61.68	Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1	[more]

BLAST of Csa6G445100.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEN2_CUCSA	5.0e-55	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445100 PE=3 SV=1	[more]
M5WC90_PRUPE	1.0e-31	70.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009689mg PE=3 SV=1	[more]
A4UR73_9ROSA	6.6e-31	70.71	Aquaporin PIP2 OS=Prunus humilis GN=pip2 PE=3 SV=2	[more]
A0A0S2PIB5_9ROSA	6.6e-31	70.71	Aquaporin (Fragment) OS=Malus zumi GN=PIP2;1 PE=2 SV=1	[more]
A0A0U2X1B7_9ROSA	8.6e-31	69.70	Aquaporin PIP 2.3 OS=Prunus cerasifera x Prunus munsoniana PE=2 SV=1	[more]

BLAST of Csa6G445100.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37180.1	2.0e-31	66.34	Aquaporin-like superfamily protein	[more]
AT5G60660.1	3.5e-31	66.67	plasma membrane intrinsic protein 2;4	[more]
AT2G37170.1	5.9e-31	64.36	plasma membrane intrinsic protein 2	[more]
AT3G53420.1	1.0e-30	66.02	plasma membrane intrinsic protein 2A	[more]
AT3G54820.1	1.2e-28	67.39	plasma membrane intrinsic protein 2;5	[more]

BLAST of Csa6G445100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192941\|gb\|KGN48145.1\|	7.2e-55	100.00	hypothetical protein Csa_6G445100 [Cucumis sativus]	[more]
gi\|778717077\|ref\|XP_004143247.2\|	3.8e-48	100.00	PREDICTED: aquaporin PIP2-2-like [Cucumis sativus]	[more]
gi\|659096733\|ref\|XP_008449258.1\|	9.4e-47	97.89	PREDICTED: aquaporin PIP2-2-like [Cucumis melo]	[more]
gi\|595827182\|ref\|XP_007205689.1\|	1.5e-31	70.71	hypothetical protein PRUPE_ppa009689mg [Prunus persica]	[more]
gi\|148467570\|gb\|ABO69705.2\|	9.5e-31	70.71	aquaporin PIP2 [Prunus humilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000425	MIP
IPR023271	Aquaporin-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G445100	Csa6G445100	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G445100.1	Csa6G445100.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G445100.1.cds1	Csa6G445100.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G445100.1.utr5p1	Csa6G445100.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PRINTS	PR00783	MINTRINSICP	coord: 79..103 score: 1.9E-11coord: 35..54 score: 1.9
IPR000425	Major intrinsic protein	PANTHER	PTHR19139	AQUAPORIN TRANSPORTER	coord: 13..95 score: 1.7
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 29..95 score: 1.3
IPR023271	Aquaporin-like	GENE3D	G3DSA:1.20.1080.10		coord: 13..95 score: 5.4
IPR023271	Aquaporin-like	unknown	SSF81338	Aquaporin-like	coord: 26..95 score: 3.14
None	No IPR available	PANTHER	PTHR19139:SF153	AQUAPORIN PIP1-1-RELATED	coord: 13..95 score: 1.7