Csa6G404270 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G404270
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGermin-like protein 5; contains IPR001929 (Germin)
LocationChr6 : 18237396 .. 18238128 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTATATTTAATTTCTTTCTCTAATGGCAACTCCATCTTTCTTTCTCCATTTATCTTTACTTCTTCTCCATTTATCTTTCAAATTCGAATTTGGTCGTTCTGATCCCGACCCCCTTCAAGATTTCTGTGTAGCCGATCCAAAGGCTTCTACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCAAATTTAGCAACAGTGGATCATTTCAAAACTTCAGCCTTATCTCTCCCAGGAAACACTAAATCCAACCGTTTTGGGTTCAGTGTTACGGTTACAAACCCCCAAAATCTACCTGGAATCAACACATTGGGCTTAACCTTGGCTCGAATCGACCTTGACCCTAGAGGACTCGTGCCACTTCACTCGCACCCACGAGCCTCAGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGGTTTGTGGACACATCTAACCGTGTGTTCACTAAGAAAATTGGACCTGGTGAATCGTTTGTTTTTCCAAAGGGGTTGCTCCATTTTATGTATAATGAAGATTTTAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCTCAATTGTTGGCTTTAGCTGTCTTCACTTCTAAACCTGAAATTCCTGAAGAAGTATTGAAGAAATCTTTTCAAATTAGTGAATGTGAAATCGCCCATATTCGTAAGAGTCTTGGAGGTTGAATTCAATGTTTGGTGTTTGTATATTATGTTTGGC

mRNA sequence

ATGGCAACTCCATCTTTCTTTCTCCATTTATCTTTACTTCTTCTCCATTTATCTTTCAAATTCGAATTTGGTCGTTCTGATCCCGACCCCCTTCAAGATTTCTGTGTAGCCGATCCAAAGGCTTCTACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCAAATTTAGCAACAGTGGATCATTTCAAAACTTCAGCCTTATCTCTCCCAGGAAACACTAAATCCAACCGTTTTGGGTTCAGTGTTACGGTTACAAACCCCCAAAATCTACCTGGAATCAACACATTGGGCTTAACCTTGGCTCGAATCGACCTTGACCCTAGAGGACTCGTGCCACTTCACTCGCACCCACGAGCCTCAGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGGTTTGTGGACACATCTAACCGTGTGTTCACTAAGAAAATTGGACCTGGTGAATCGTTTGTTTTTCCAAAGGGGTTGCTCCATTTTATGTATAATGAAGATTTTAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCTCAATTGTTGGCTTTAGCTGTCTTCACTTCTAAACCTGAAATTCCTGAAGAAGTATTGAAGAAATCTTTTCAAATTAGTGAATGTGAAATCGCCCATATTCGTAAGAGTCTTGGAGGTTGA

Coding sequence (CDS)

ATGGCAACTCCATCTTTCTTTCTCCATTTATCTTTACTTCTTCTCCATTTATCTTTCAAATTCGAATTTGGTCGTTCTGATCCCGACCCCCTTCAAGATTTCTGTGTAGCCGATCCAAAGGCTTCTACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCAAATTTAGCAACAGTGGATCATTTCAAAACTTCAGCCTTATCTCTCCCAGGAAACACTAAATCCAACCGTTTTGGGTTCAGTGTTACGGTTACAAACCCCCAAAATCTACCTGGAATCAACACATTGGGCTTAACCTTGGCTCGAATCGACCTTGACCCTAGAGGACTCGTGCCACTTCACTCGCACCCACGAGCCTCAGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGGTTTGTGGACACATCTAACCGTGTGTTCACTAAGAAAATTGGACCTGGTGAATCGTTTGTTTTTCCAAAGGGGTTGCTCCATTTTATGTATAATGAAGATTTTAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCTCAATTGTTGGCTTTAGCTGTCTTCACTTCTAAACCTGAAATTCCTGAAGAAGTATTGAAGAAATCTTTTCAAATTAGTGAATGTGAAATCGCCCATATTCGTAAGAGTCTTGGAGGTTGA

Protein sequence

MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG*
Homology
[Close]
BLAST of Csa6G404270 vs. Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 9.8e-62
Identity = 121/213 (56.81%), Postives = 154/213 (72.30%), Query Frame = 1 

Query: 13  LLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFF-NGIPCINPNLATVDHFKTSALSLP 72
           +LL L+      +SDPDPLQD+CV+ P +S    F NG  C +P  A+V  F TSALS P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 73  GNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQM 132
           GNTK+  F  +VTVT   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 133 VVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALA 192
           +VGFVDTS RVFT+++ PGE+FVFPKGL+HF+YN D   SA+AVSGL+SQNPG Q+++L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 193 VFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
            F SKP    EVLK ++ I+  ++A IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]
BLAST of Csa6G404270 vs. Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179100 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.5e-54
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 1 

Query: 13  LLLHLSFKFEFGRSDPDPLQDFCVADPKASTSS---FFNGIPCINPNLATVDHFKTSALS 72
           +LL L+      R DPD L D+CVAD  A+T++     NG+ CI+P LA  DHF TSALS
Sbjct: 9   ILLSLALFAVLCRCDPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALS 68

Query: 73  LPGNTKSNRFGFSVTVTNPQ-NLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLI 132
              N  +  +GF+ T+T+P  +LPG N  GL +ARIDL P G+ P HSHPRASE  + L 
Sbjct: 69  RATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLS 128

Query: 133 GQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLL 192
           G ++VGF DTS R++T+ +  GE+FVFP+ ++HF+YN D    AV +SGLNSQ+PGAQL+
Sbjct: 129 GSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLV 188

Query: 193 ALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
             + F ++P +P+EVLKK+F+I+  ++  I+K LGG
Sbjct: 189 PFSAFRTEPRLPDEVLKKAFKITGQDVQRIQKHLGG 224

[Close]
BLAST of Csa6G404270 vs. Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.4e-44
Identity = 98/214 (45.79%), Postives = 138/214 (64.49%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+PSF L  +LL L     ++   SDP PLQDFCVAD  +      NG  C++P   T 
Sbjct: 1   MASPSFCLLAALLAL---VSWQAIASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVTA 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHF  +A+ L    K+N+ G +VT+ N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  DHFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTS--NRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGL 180
           +E+   L G + VGFV ++  N +F+K +  G+ FVFP+GL+HF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISE 213
           +SQNPGA  +A AVF SKP I ++VL K+FQ+ +
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDKVLAKAFQVEK 208

[Close]
BLAST of Csa6G404270 vs. Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-44
Identity = 98/214 (45.79%), Postives = 136/214 (63.55%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+PSF L  +LL L     ++   SDP PLQDFCVAD  +      NG  C++P   T 
Sbjct: 1   MASPSFCLFAALLAL---VSWQAIASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVTA 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHF  +A+ L    K+N+ G +VT+ N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  DHFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTS--NRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGL 180
           +E+   L G + VGFV ++  N +F+K +  G+ FVFP GL+HF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISE 213
           +SQNPG   +A AVF SKP I +EVL K+FQ+ +
Sbjct: 181 SSQNPGVITIANAVFGSKPPISDEVLAKAFQVGK 208

[Close]
BLAST of Csa6G404270 vs. Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 96/214 (44.86%), Postives = 139/214 (64.95%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+PS F  L++LL  +S++     SDP PLQDFCVAD  +      NG  C++P     
Sbjct: 1   MASPSSFCLLAVLLALVSWQAI--ASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVNA 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHF  +A+ L    K+N+ G +VT+ N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  DHFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTS--NRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGL 180
           +E+   L G + VGFV ++  N +F+K +  G+ FVFP+GL+HF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAAL 180

Query: 181 NSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISE 213
           +SQNPGA  +A AVF SKP I +++L K+FQ+ +
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDDILAKAFQVEK 209

[Close]
BLAST of Csa6G404270 vs. TrEMBL
Match: A0A0A0KHF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404270 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 4.8e-124
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]
BLAST of Csa6G404270 vs. TrEMBL
Match: G7K5M6_MEDTR (Germin family 1 protein OS=Medicago truncatula GN=MTR_5g036570 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.1e-71
Identity = 139/224 (62.05%), Postives = 167/224 (74.55%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           M T   F  L LLL  LS       SDPDPLQD+C+AD K   + F NG+PCI+P  AT 
Sbjct: 1   MKTQIHFHTLQLLLFTLSLFLNQCLSDPDPLQDYCIADNK--NTFFLNGLPCIDPKQATS 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
            HF TS+LS PGNT +N FGFSVT TN  NLPG+NTLGL L R+D+   G+VP HSHPRA
Sbjct: 61  SHFATSSLSKPGNT-TNMFGFSVTPTNTINLPGLNTLGLVLVRVDIAGNGIVPPHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVT C+ G ++VGFVDTSNR FT+ + PGESFVFPKGL+HF+YN D K+ A+A+SGLNS
Sbjct: 121 SEVTTCIKGLLLVGFVDTSNRAFTQNLSPGESFVFPKGLVHFLYNRDSKQPAIAISGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQ+ ++A F SKP IP+EVLKK+FQI+  E+  IRK LGG
Sbjct: 181 QNPGAQIASIATFASKPSIPDEVLKKAFQINGQEVDIIRKKLGG 221

[Close]
BLAST of Csa6G404270 vs. TrEMBL
Match: I3T289_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.3e-70
Identity = 138/224 (61.61%), Postives = 167/224 (74.55%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           M T   F  L LLL  LS       SDPDPLQD+C+AD K   + F NG+PCI+P  AT 
Sbjct: 1   MKTQIHFHTLQLLLFTLSLFLNQCLSDPDPLQDYCIADNK--NTFFLNGLPCIDPKQATS 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
            HF TS+LS PGNT +N FGFSVT TN  +LPG+NTLGL L R+D+   G+VP HSHPRA
Sbjct: 61  SHFATSSLSKPGNT-TNMFGFSVTPTNTIDLPGLNTLGLVLVRVDIAGNGIVPPHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVT C+ G ++VGFVDTSNR FT+ + PGESFVFPKGL+HF+YN D K+ A+A+SGLNS
Sbjct: 121 SEVTTCIKGLLLVGFVDTSNRAFTQNLSPGESFVFPKGLVHFLYNRDSKQPAIAISGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQ+ ++A F SKP IP+EVLKK+FQI+  E+  IRK LGG
Sbjct: 181 QNPGAQIASIATFASKPSIPDEVLKKAFQINGQEVDIIRKKLGG 221

[Close]
BLAST of Csa6G404270 vs. TrEMBL
Match: U5G180_POPTR (Germin-like protein subfamily 1 member 1 OS=Populus trichocarpa GN=POPTR_0010s04770g PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-69
Identity = 130/211 (61.61%), Postives = 165/211 (78.20%), Query Frame = 1 

Query: 14  LLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGN 73
           LL L+      ++DP PLQD+C+AD   S   + NG PCI+P L+   HF T+ALS PGN
Sbjct: 12  LLTLALLLGSTKADPHPLQDYCIAD--TSKPFYLNGAPCIDPKLSASSHFTTAALSKPGN 71

Query: 74  TKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVV 133
           TK+  +GFSV VTN  NLPG+NT+GLT+AR+DLDP GLVPLHSHPRASEVTIC+ G ++V
Sbjct: 72  TKATPYGFSVKVTNVTNLPGLNTMGLTMARVDLDPNGLVPLHSHPRASEVTICIKGSLLV 131

Query: 134 GFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVF 193
           GFV+TSN VFT+ + PGESFVFP+GL+HF+YN +   SA+AVSGL+SQ+PG Q+ A A F
Sbjct: 132 GFVNTSNYVFTQLLRPGESFVFPRGLIHFLYNMETMDSALAVSGLSSQSPGTQIAAFAAF 191

Query: 194 TSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           TSKP +P+EVLKKSFQIS  ++  IR++LGG
Sbjct: 192 TSKPSMPDEVLKKSFQISNQDVTRIRRNLGG 220

[Close]
BLAST of Csa6G404270 vs. TrEMBL
Match: D7TNK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00970 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69
Identity = 125/200 (62.50%), Postives = 158/200 (79.00%), Query Frame = 1 

Query: 25  RSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGNTKSNRFGFSVT 84
           + DPDPLQD+C+AD KAS + F NG+PCI+P LA V HF TSALS PGNT +N FGFS+T
Sbjct: 22  KPDPDPLQDYCIADTKASKAFFINGVPCIDPQLAQVSHFTTSALSKPGNTSANPFGFSIT 81

Query: 85  VTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVVGFVDTSNRVFT 144
           +TN  NLPG NT+GLT+AR D+   GLVPLHSHPRASEV   L G ++VGF+DTSNR+FT
Sbjct: 82  LTNTMNLPGFNTMGLTMARADIAANGLVPLHSHPRASEVATLLKGALLVGFIDTSNRLFT 141

Query: 145 KKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVFTSKPEIPEEVL 204
           + + PG+SFVFPKG++HF+YN D    AV ++GLNSQNPG QL + A F + P +P+EVL
Sbjct: 142 QLLRPGDSFVFPKGMIHFLYNLDSLAPAVVLAGLNSQNPGTQLTSTAAFATNPRLPDEVL 201

Query: 205 KKSFQISECEIAHIRKSLGG 225
           KK+FQIS  ++A IR++LGG
Sbjct: 202 KKAFQISGQDVARIRRNLGG 221

[Close]
BLAST of Csa6G404270 vs. TAIR10
Match: AT1G10460.1 (AT1G10460.1 germin-like protein 7)

HSP 1 Score: 238.0 bits (606), Expect = 5.5e-63
Identity = 121/213 (56.81%), Postives = 154/213 (72.30%), Query Frame = 1 

Query: 13  LLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFF-NGIPCINPNLATVDHFKTSALSLP 72
           +LL L+      +SDPDPLQD+CV+ P +S    F NG  C +P  A+V  F TSALS P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 73  GNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQM 132
           GNTK+  F  +VTVT   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 133 VVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALA 192
           +VGFVDTS RVFT+++ PGE+FVFPKGL+HF+YN D   SA+AVSGL+SQNPG Q+++L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 193 VFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
            F SKP    EVLK ++ I+  ++A IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]
BLAST of Csa6G404270 vs. TAIR10
Match: AT3G05950.1 (AT3G05950.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 2.0e-41
Identity = 97/207 (46.86%), Postives = 130/207 (62.80%), Query Frame = 1 

Query: 7   FLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTS 66
           FL    +LL L+  F     DP PLQDFCVA   AS   F NG  C +P     + F TS
Sbjct: 7   FLVAKAILLALASSF-VSCYDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTS 66

Query: 67  ALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTIC 126
            L++ GNT  NR G +VT  N   +PG+NTLG++L RID  P G  P H+HPRA+E+ + 
Sbjct: 67  GLNIAGNT-INRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVV 126

Query: 127 LIGQMVVGFVDT---SNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNP 186
           + G ++VGFV +   +NR+F+K + PG+ FVFP G++HF  N   + +AVA +GL SQNP
Sbjct: 127 VEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVG-RTNAVAFAGLGSQNP 186

Query: 187 GAQLLALAVFTSKPEIPEEVLKKSFQI 211
           G   +A AVF SKP I  E+L K+FQ+
Sbjct: 187 GTITIADAVFGSKPSIMPEILAKAFQL 209

[Close]
BLAST of Csa6G404270 vs. TAIR10
Match: AT3G62020.1 (AT3G62020.1 germin-like protein 10)

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-40
Identity = 91/214 (42.52%), Postives = 123/214 (57.48%), Query Frame = 1 

Query: 6   FFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKT 65
           FF  LSL ++ L++       DPD LQD CVAD  +      NG  C   +  T   F  
Sbjct: 9   FFTLLSLNVIVLAY-------DPDTLQDLCVADRTSGIK--VNGFTCKPESNITASDFFF 68

Query: 66  SALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTI 125
           + +  P    +N  G +VT  N + + G+NTLG++LARID  P GL P H+HPRA+EV  
Sbjct: 69  AGIGKPA-VVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIF 128

Query: 126 CLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGA 185
            L G++ VGF+ T+N++F K +  GE FVFP+GL+H+  N D  K A  +S  NSQ PG 
Sbjct: 129 VLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGT 188

Query: 186 QLLALAVFTSKPEIPEEVLKKSFQISECEIAHIR 220
           Q +A  +FT+ P IP+ VL  +FQI   EI  I+
Sbjct: 189 QSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIK 212

[Close]
BLAST of Csa6G404270 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 8.6e-40
Identity = 90/219 (41.10%), Postives = 126/219 (57.53%), Query Frame = 1 

Query: 8   LHLSLLLLHLSFKFEFG-RSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTS 67
           L+L++L L  +    F   SDP PLQDFC+     + + F NG  C +P L T D F  S
Sbjct: 4   LYLAILYLLAASTLPFAIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFS 63

Query: 68  ALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTIC 127
            L     T+S+  G +VT  N   +PG+NTLG++L RID    G  P H+HPRA+E+ + 
Sbjct: 64  GLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLV 123

Query: 128 LIGQMVVGFVDT--SNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPG 187
             G + VGF  +   NR+F K +  G+ FVFP+GL+HF  N   K+ AVA + L+SQNPG
Sbjct: 124 QEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIG-KQPAVAFASLSSQNPG 183

Query: 188 AQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLG 224
             ++   +F SKP I   VL K+FQ+    I  ++K  G
Sbjct: 184 VIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKFG 221

[Close]
BLAST of Csa6G404270 vs. TAIR10
Match: AT1G09560.1 (AT1G09560.1 germin-like protein 5)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 93/219 (42.47%), Postives = 129/219 (58.90%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+P+  L L LLL  +SF F    +DPD LQD CVAD  +      NG PC +    T 
Sbjct: 1   MASPT--LTLLLLLTTVSF-FISSSADPDMLQDLCVADLPSGIK--INGFPCKDAATVTS 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
             F +  L+ PG T +N FG  VT  N   +PG+NTLG++L+RID  P GL P H+HPRA
Sbjct: 61  ADFFSQGLAKPGLT-NNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           +EV   L G + VGF+ T+N++ ++ +  G+ F FPKGL+HF  N     ++V ++  NS
Sbjct: 121 TEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASV-IAAFNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIR 220
           Q PG Q L   +F S P +P+ +L ++FQ S   + HI+
Sbjct: 181 QLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIK 212

[Close]
BLAST of Csa6G404270 vs. NCBI nr
Match: gi|449458015|ref|XP_004146743.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 6.9e-124
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]
BLAST of Csa6G404270 vs. NCBI nr
Match: gi|659113237|ref|XP_008456470.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 1.5e-115
Identity = 213/224 (95.09%), Postives = 216/224 (96.43%), Query Frame = 1 

Query: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MATPSFFL   LLLLHLS KF+F RSDPDPLQDFCVAD KASTSSFFNGIPCINPNLATV
Sbjct: 1   MATPSFFL--LLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHFKTSALSLPGNTKSNRFGFSVT+TNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQL ALA FTSKPEIP+EVLKKSFQISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]
BLAST of Csa6G404270 vs. NCBI nr
Match: gi|1009153829|ref|XP_015894838.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Ziziphus jujuba])

HSP 1 Score: 283.1 bits (723), Expect = 4.2e-73
Identity = 137/215 (63.72%), Postives = 169/215 (78.60%), Query Frame = 1 

Query: 10  LSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALS 69
           L +LLL L+ +    + DPDPLQD+CVAD K + + F NG PCI+P LAT  HF TSALS
Sbjct: 8   LHILLLSLTLQLLRVKPDPDPLQDYCVADTKPNQTFFINGAPCIDPELATSSHFTTSALS 67

Query: 70  LPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIG 129
            PG+TK+N FGF+VT+TN  NLPG+NTLGLTLAR+D+   G+VP HSHPRASEVTICL G
Sbjct: 68  KPGSTKTNPFGFNVTLTNKVNLPGLNTLGLTLARVDIAENGIVPPHSHPRASEVTICLKG 127

Query: 130 QMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLA 189
            ++VGFVDTSNR+FT+ +  G+SFVFPKGL+HF+YN D    A A+SGL+SQNPG QL A
Sbjct: 128 SVLVGFVDTSNRLFTQTLKEGDSFVFPKGLIHFLYNRDLNNPAFALSGLSSQNPGTQLAA 187

Query: 190 LAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           LA FTSKP IP E+L K+FQIS+ ++  IRK+LGG
Sbjct: 188 LASFTSKPAIPNEILTKAFQISDQDVNRIRKNLGG 222

[Close]
BLAST of Csa6G404270 vs. NCBI nr
Match: gi|743924962|ref|XP_011006614.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Populus euphratica])

HSP 1 Score: 278.9 bits (712), Expect = 8.0e-72
Identity = 135/211 (63.98%), Postives = 167/211 (79.15%), Query Frame = 1 

Query: 14  LLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGN 73
           LL L+      ++DP PLQD+C+AD   S   + NG PCI+P LA   HF T+ALS PGN
Sbjct: 12  LLTLALLLGSTKADPHPLQDYCIAD--TSKPFYLNGAPCIDPKLAASSHFTTAALSKPGN 71

Query: 74  TKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVV 133
           TK+  FGFSV +TN  NLPG+NT+GLT+ARIDLDP GLVPLHSHPRASEVTIC+ G ++V
Sbjct: 72  TKATPFGFSVKLTNVTNLPGLNTMGLTMARIDLDPNGLVPLHSHPRASEVTICIKGSLLV 131

Query: 134 GFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVF 193
           GF+DTSN VFT+ + PGESFVFP+GL+HF+YN +   SA+AVSGL+SQNPGAQ+ A+A F
Sbjct: 132 GFIDTSNYVFTQLLRPGESFVFPRGLIHFLYNMETMGSALAVSGLSSQNPGAQIAAVAAF 191

Query: 194 TSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           TSKP +PEEVLKKSFQIS  ++  IR++LGG
Sbjct: 192 TSKPSMPEEVLKKSFQISNQDVTRIRRNLGG 220

[Close]
BLAST of Csa6G404270 vs. NCBI nr
Match: gi|702277369|ref|XP_010044669.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Eucalyptus grandis])

HSP 1 Score: 276.6 bits (706), Expect = 4.0e-71
Identity = 139/222 (62.61%), Postives = 173/222 (77.93%), Query Frame = 1 

Query: 3   TPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDH 62
           TPS    L +L L LS      R+DPDPLQD+C+AD +  +    NG PCINPNLA++ H
Sbjct: 7   TPSPLRTLVVLALILSH----ARADPDPLQDYCIADMRNQSPYSVNGAPCINPNLASISH 66

Query: 63  FKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASE 122
           F TSALS  GNTK+N+FGF+VT+TN  NLPG+NT+GLT+ARID+   GLVP HSHPRASE
Sbjct: 67  FTTSALSRRGNTKANQFGFNVTLTNTANLPGLNTMGLTMARIDMAGNGLVPPHSHPRASE 126

Query: 123 VTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQN 182
           VTICL G + VGFVDTS R+FT+ + PGESFVFPKGL+H++YN D K  A+A+SGL+SQN
Sbjct: 127 VTICLEGVIGVGFVDTSYRLFTQILRPGESFVFPKGLIHYLYNYDLKNPALAISGLSSQN 186

Query: 183 PGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           PGAQ+ ++A F SKP IP+EVL K+FQI+  +IA IRK+LGG
Sbjct: 187 PGAQIASVAAFMSKPWIPDEVLGKAFQITGQDIAKIRKNLGG 224

The following BLAST results are available for this feature:
BLAST of Csa6G404270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL11_ARATH9.8e-6256.81Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV... [more]
GL31_ORYSJ7.5e-5449.54Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179100 PE=3 SV=... [more]
GL88_ORYSJ2.4e-4445.79Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=... [more]
GL89_ORYSJ4.1e-4445.79Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=... [more]
GL87_ORYSJ1.2e-4344.86Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1[more]
BLAST of Csa6G404270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHF1_CUCSA4.8e-124100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404270 PE=3 SV=1[more]
G7K5M6_MEDTR6.1e-7162.05Germin family 1 protein OS=Medicago truncatula GN=MTR_5g036570 PE=3 SV=1[more]
I3T289_MEDTR2.3e-7061.61Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
U5G180_POPTR1.2e-6961.61Germin-like protein subfamily 1 member 1 OS=Populus trichocarpa GN=POPTR_0010s04... [more]
D7TNK0_VITVI1.5e-6962.50Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00970 PE=3 SV=... [more]
BLAST of Csa6G404270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10460.15.5e-6356.81 germin-like protein 7[more]
AT3G05950.12.0e-4146.86 RmlC-like cupins superfamily protein[more]
AT3G62020.13.8e-4042.52 germin-like protein 10[more]
AT5G38960.18.6e-4041.10 RmlC-like cupins superfamily protein[more]
AT1G09560.11.5e-3942.47 germin-like protein 5[more]
BLAST of Csa6G404270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458015|ref|XP_004146743.1|6.9e-124100.00PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis sativus][more]
gi|659113237|ref|XP_008456470.1|1.5e-11595.09PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo][more]
gi|1009153829|ref|XP_015894838.1|4.2e-7363.72PREDICTED: germin-like protein subfamily 1 member 1 [Ziziphus jujuba][more]
gi|743924962|ref|XP_011006614.1|8.0e-7263.98PREDICTED: germin-like protein subfamily 1 member 1 [Populus euphratica][more]
gi|702277369|ref|XP_010044669.1|4.0e-7162.61PREDICTED: germin-like protein subfamily 1 member 1 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR019780Germin_Mn-BS
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004784 superoxide dismutase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G404270.1Csa6G404270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 115..135
score: 2.0E-21coord: 179..194
score: 2.0E-21coord: 145..165
score: 2.0
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 69..212
score: 9.7
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 66..216
score: 1.0
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 27..220
score: 1.21
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 26..220
score: 9.4
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 110..123
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 1..224
score: 2.0E
NoneNo IPR availablePANTHERPTHR31238:SF5GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1coord: 1..224
score: 2.0E