Cla013778 (gene) Watermelon (97103) v1

Overview
NameCla013778
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGermin-like protein 5 (AHRD V1 ***- C7S8B9_SOYBN); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold
LocationChr8 : 16716019 .. 16716690 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTCCTCCATCTTTGTTTCTCTCATTACTTCTTCTCCATTTCTCCTTCAAATTCGACCTCGCCCGTTCCGATCCCGACCCGCTTCAAGATTTCTGCGTAGCCGATTTGAAAGCTTCCACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCCAATTTAGCCAATGTAGATCACTTCAAAACATCAGCCTTACACCTACCAGGAAACACCAAAAGCAACCGTTTTGGCTTCAGCGTTACACTCACAAACCCTCAAAACTTGCCTGGAATCAACACACTGGGCTTGACCTTGGCTCGAATCGACCTCGAGCCCAAAGGGCTTGTGCCACTTCACTCGCACCCACGAGCCTCGGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGCTTTGTTGACACTTTAAATCGTGTGTTCACTAAGAAAATTGGGCCTGGAGAATCGTTTGTTTTCCCAAAAGGGTTAATCCATTTTATGTATAATGAAGATTTGAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCCCAATTGTTGGGTTTGGCTGCTTTCATTTCTAAACCTGAAATTCCTCAAGAAGTGTTGACGAAATCTTTCCAAATTAGTGAATGTGAAATCTCTCATATTCGTAAGAGCCTTGGAGGTTAA

mRNA sequence

ATGGCGACTCCTCCATCTTTGTTTCTCTCATTACTTCTTCTCCATTTCTCCTTCAAATTCGACCTCGCCCGTTCCGATCCCGACCCGCTTCAAGATTTCTGCGTAGCCGATTTGAAAGCTTCCACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCCAATTTAGCCAATGTAGATCACTTCAAAACATCAGCCTTACACCTACCAGGAAACACCAAAAGCAACCGTTTTGGCTTCAGCGTTACACTCACAAACCCTCAAAACTTGCCTGGAATCAACACACTGGGCTTGACCTTGGCTCGAATCGACCTCGAGCCCAAAGGGCTTGTGCCACTTCACTCGCACCCACGAGCCTCGGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGCTTTGTTGACACTTTAAATCGTGTGTTCACTAAGAAAATTGGGCCTGGAGAATCGTTTGTTTTCCCAAAAGGGTTAATCCATTTTATGTATAATGAAGATTTGAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCCCAATTGTTGGGTTTGGCTGCTTTCATTTCTAAACCTGAAATTCCTCAAGAAGTGTTGACGAAATCTTTCCAAATTAGTGAATGTGAAATCTCTCATATTCGTAAGAGCCTTGGAGGTTAA

Coding sequence (CDS)

ATGGCGACTCCTCCATCTTTGTTTCTCTCATTACTTCTTCTCCATTTCTCCTTCAAATTCGACCTCGCCCGTTCCGATCCCGACCCGCTTCAAGATTTCTGCGTAGCCGATTTGAAAGCTTCCACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCCAATTTAGCCAATGTAGATCACTTCAAAACATCAGCCTTACACCTACCAGGAAACACCAAAAGCAACCGTTTTGGCTTCAGCGTTACACTCACAAACCCTCAAAACTTGCCTGGAATCAACACACTGGGCTTGACCTTGGCTCGAATCGACCTCGAGCCCAAAGGGCTTGTGCCACTTCACTCGCACCCACGAGCCTCGGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGCTTTGTTGACACTTTAAATCGTGTGTTCACTAAGAAAATTGGGCCTGGAGAATCGTTTGTTTTCCCAAAAGGGTTAATCCATTTTATGTATAATGAAGATTTGAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCCCAATTGTTGGGTTTGGCTGCTTTCATTTCTAAACCTGAAATTCCTCAAGAAGTGTTGACGAAATCTTTCCAAATTAGTGAATGTGAAATCTCTCATATTCGTAAGAGCCTTGGAGGTTAA

Protein sequence

MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG
Homology
[Close]
BLAST of Cla013778 vs. Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 3.4e-59
Identity = 116/213 (54.46%), Postives = 150/213 (70.42%), Query Frame = 1 

Query: 12  LLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFF-NGIPCINPNLANVDHFKTSALHLP 71
           +LL  +      +SDPDPLQD+CV+   +S    F NG  C +P  A+V  F TSAL  P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 72  GNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIGQM 131
           GNTK+  F  +VT+T   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 132 VVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLGLA 191
           +VGFVDT  RVFT+++ PGE+FVFPKGLIHF+YN D   SA+AVSGL+SQNPG Q++ L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 192 AFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           +FISKP    EVL  ++ I+  +++ IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]
BLAST of Cla013778 vs. Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179100 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.8e-53
Identity = 106/216 (49.07%), Postives = 144/216 (66.67%), Query Frame = 1 

Query: 12  LLLHFSFKFDLARSDPDPLQDFCVADLKASTSS---FFNGIPCINPNLANVDHFKTSALH 71
           +LL  +    L R DPD L D+CVAD  A+T++     NG+ CI+P LA  DHF TSAL 
Sbjct: 9   ILLSLALFAVLCRCDPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALS 68

Query: 72  LPGNTKSNRFGFSVTLTNPQ-NLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLI 131
              N  +  +GF+ TLT+P  +LPG N  GL +ARIDL P G+ P HSHPRASE  + L 
Sbjct: 69  RATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLS 128

Query: 132 GQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLL 191
           G ++VGF DT  R++T+ +  GE+FVFP+ ++HF+YN D    AV +SGLNSQ+PGAQL+
Sbjct: 129 GSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLV 188

Query: 192 GLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
             +AF ++P +P EVL K+F+I+  ++  I+K LGG
Sbjct: 189 PFSAFRTEPRLPDEVLKKAFKITGQDVQRIQKHLGG 224

[Close]
BLAST of Cla013778 vs. Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.1e-44
Identity = 101/221 (45.70%), Postives = 136/221 (61.54%), Query Frame = 1 

Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MA+P SL L   L   S++     SDP PLQDFCVAD+ +      NG  C+NP   N D
Sbjct: 1   MASPSSLCLLAALALISWQ--AMASDPSPLQDFCVADMHSPVR--VNGFACLNPMEVNAD 60

Query: 61  HF-KTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
           HF K + L  P   K+N+ G +VTL N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  HFFKAAKLDTP--RKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTL--NRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGL 180
           +E+   L G + VGFV +   N +F+K +  G+ FVFP+GLIHF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           +SQNPGA  +  A F SKP I  EVL K+FQ+ +  I  ++
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 215

[Close]
BLAST of Cla013778 vs. Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.5e-43
Identity = 101/219 (46.12%), Postives = 129/219 (58.90%), Query Frame = 1 

Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MA+  SL+L   LL  +  +     DP PLQDFCVAD+K+      NG PC NP   N D
Sbjct: 1   MASSSSLYLLAALLALA-SWQAIAFDPSPLQDFCVADMKSPVR--VNGFPCKNPMEVNSD 60

Query: 61  HFKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
            F  +A      +  N+ G +VT  N  N PG+NTLG++LARID  P G+ P H HPRA+
Sbjct: 61  DFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRAT 120

Query: 121 EVTICLIGQMVVGFV-DTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           E+   L G + VGFV    NR+F+K +  G++FVFPK +IHF  N D  K AVA S LNS
Sbjct: 121 ELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           QNPG   +  A F SKP I  +VLTK+FQ+ +  I  ++
Sbjct: 181 QNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLK 216

[Close]
BLAST of Cla013778 vs. Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.5e-43
Identity = 99/220 (45.00%), Postives = 135/220 (61.36%), Query Frame = 1 

Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MA+   L L+ LL   S++     SDP PLQDFCVAD+ +      NG  C+NP   N D
Sbjct: 1   MASSSFLLLATLLAMASWQG--MASDPSPLQDFCVADMHSPV--LVNGFACLNPKDVNAD 60

Query: 61  HFKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HF  +A+ L    K+N+ G +VTL N   +PG+NTLG+++ARID  P G  P H+HPRA+
Sbjct: 61  HFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRAT 120

Query: 121 EVTICLIGQMVVGFVDTL--NRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLN 180
           E+   L G + VGFV +   N+ F+K +  G+ FVFP GLIHF +N +  K AVA++ L+
Sbjct: 121 EILTVLEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALS 180

Query: 181 SQNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           SQNPGA  +  A F SKP I  +VL K+FQ+ +  I  ++
Sbjct: 181 SQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQ 215

[Close]
BLAST of Cla013778 vs. TrEMBL
Match: A0A0A0KHF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404270 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.3e-109
Identity = 201/224 (89.73%), Postives = 208/224 (92.86%), Query Frame = 1 

Query: 1   MATPPS-LFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP   L LSLLLLH SFKF+  RSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA V
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
           DHFKTSAL LPGNTKSNRFGFSVT+TNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQLL LA F SKPEIP+EVL KSFQISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]
BLAST of Cla013778 vs. TrEMBL
Match: D7TNK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00970 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.9e-70
Identity = 131/222 (59.01%), Postives = 165/222 (74.32%), Query Frame = 1 

Query: 2   ATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDH 61
           +T P LF+++ LL       L + DPDPLQD+C+AD KAS + F NG+PCI+P LA V H
Sbjct: 5   STLPKLFIAIALLS-----GLVKPDPDPLQDYCIADTKASKAFFINGVPCIDPQLAQVSH 64

Query: 62  FKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASE 121
           F TSAL  PGNT +N FGFS+TLTN  NLPG NT+GLT+AR D+   GLVPLHSHPRASE
Sbjct: 65  FTTSALSKPGNTSANPFGFSITLTNTMNLPGFNTMGLTMARADIAANGLVPLHSHPRASE 124

Query: 122 VTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQN 181
           V   L G ++VGF+DT NR+FT+ + PG+SFVFPKG+IHF+YN D    AV ++GLNSQN
Sbjct: 125 VATLLKGALLVGFIDTSNRLFTQLLRPGDSFVFPKGMIHFLYNLDSLAPAVVLAGLNSQN 184

Query: 182 PGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           PG QL   AAF + P +P EVL K+FQIS  +++ IR++LGG
Sbjct: 185 PGTQLTSTAAFATNPRLPDEVLKKAFQISGQDVARIRRNLGG 221

[Close]
BLAST of Cla013778 vs. TrEMBL
Match: A0A0D2PVB6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G187500 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.2e-70
Identity = 135/217 (62.21%), Postives = 170/217 (78.34%), Query Frame = 1 

Query: 7   LFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTSA 66
           LFL L+LL       LA+ DPDPLQD+C+AD K+    + NG PC+NP LA   HF TSA
Sbjct: 10  LFLGLILLP-----GLAKPDPDPLQDYCIADTKSPL--YLNGAPCLNPTLALSSHFTTSA 69

Query: 67  LHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICL 126
           L  PG+TK+N+FGFSVTLT   NLPGINT+GLT+AR+D+   GLVP HSHPRASEVTICL
Sbjct: 70  LAKPGDTKANQFGFSVTLTTLANLPGINTMGLTMARVDIAANGLVPPHSHPRASEVTICL 129

Query: 127 IGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQL 186
            G ++VGFVDT NR+FT+K+ PG++FVFP+GLIHF+YN + KK A+A+SGL+SQNPGAQ+
Sbjct: 130 QGVILVGFVDTSNRLFTQKLEPGDAFVFPRGLIHFLYNMEPKKPALAISGLSSQNPGAQI 189

Query: 187 LGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
              AAF+S P IP+ VL K+FQIS  +++ IRK+LGG
Sbjct: 190 ASRAAFVSNPPIPEVVLEKAFQISPEDVAKIRKNLGG 219

[Close]
BLAST of Cla013778 vs. TrEMBL
Match: A0A067GSN6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027536mg PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-69
Identity = 128/215 (59.53%), Postives = 164/215 (76.28%), Query Frame = 1 

Query: 9   LSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTSALH 68
           + L L   +    LA++DP PLQDFC+AD  + +S + NG+PC+NPN A   HF TSAL 
Sbjct: 8   IQLFLYSLALLLSLAKTDPPPLQDFCIADTASPSSFYNNGVPCLNPNSAVSSHFVTSALA 67

Query: 69  LPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIG 128
            PG T  N FGF+ TLTN +NLPG+NT+GLT+ARID+   G+VP H+HPRASEVTICL G
Sbjct: 68  KPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDIAANGIVPPHTHPRASEVTICLKG 127

Query: 129 QMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLG 188
            ++VGFVDTL R+FT+++ PG+SFVFPKGLIHF+YN D  K A+A+SGL+SQNPG Q+  
Sbjct: 128 ALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQMTS 187

Query: 189 LAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           +A F SKP IP EVL K+FQI+  ++S IRK+LGG
Sbjct: 188 MATFASKPPIPDEVLKKAFQITRQDVSIIRKNLGG 222

[Close]
BLAST of Cla013778 vs. TrEMBL
Match: V4TEM4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033943mg PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-69
Identity = 129/218 (59.17%), Postives = 164/218 (75.23%), Query Frame = 1 

Query: 6   SLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTS 65
           S  + L L   +    LA++DP PLQDFC+AD  + +  + NG+PC+NPN A   HF TS
Sbjct: 5   SKMIQLFLYSLALLLSLAKTDPPPLQDFCIADTASPSLFYNNGVPCLNPNSAVSSHFVTS 64

Query: 66  ALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTIC 125
           AL  PG T  N FGF+ TLTN +NLPG+NT+GLT+ARID+   G+VP H+HPRASEVTIC
Sbjct: 65  ALAKPGKTSGNIFGFNATLTNTKNLPGVNTMGLTMARIDITANGIVPPHTHPRASEVTIC 124

Query: 126 LIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQ 185
           L G ++VGFVDTL R+FT+++ PG+SFVFPKGLIHF+YN D  K A+A+SGL+SQNPG Q
Sbjct: 125 LKGALLVGFVDTLGRLFTQQLRPGDSFVFPKGLIHFLYNMDSSKPALALSGLSSQNPGLQ 184

Query: 186 LLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           +  +A F SKP IP EVL K+FQI+  +IS IRK+LGG
Sbjct: 185 MTSMATFASKPPIPDEVLKKAFQITSQDISIIRKNLGG 222

[Close]
BLAST of Cla013778 vs. NCBI nr
Match: gi|659113237|ref|XP_008456470.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 5.6e-110
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 1 

Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MATP S FL LLLLH S KFD ARSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA VD
Sbjct: 1   MATP-SFFLLLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATVD 60

Query: 61  HFKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HFKTSAL LPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRAS
Sbjct: 61  HFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRAS 120

Query: 121 EVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ 180
           EVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNSQ
Sbjct: 121 EVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQ 180

Query: 181 NPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           NPGAQL  LAAF SKPEIPQEVL KSFQISECEI+HIRKSLGG
Sbjct: 181 NPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]
BLAST of Cla013778 vs. NCBI nr
Match: gi|449458015|ref|XP_004146743.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 6.2e-109
Identity = 201/224 (89.73%), Postives = 208/224 (92.86%), Query Frame = 1 

Query: 1   MATPPS-LFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP   L LSLLLLH SFKF+  RSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA V
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
           DHFKTSAL LPGNTKSNRFGFSVT+TNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQLL LA F SKPEIP+EVL KSFQISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]
BLAST of Cla013778 vs. NCBI nr
Match: gi|1009153829|ref|XP_015894838.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Ziziphus jujuba])

HSP 1 Score: 282.0 bits (720), Expect = 9.3e-73
Identity = 136/218 (62.39%), Postives = 168/218 (77.06%), Query Frame = 1 

Query: 6   SLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTS 65
           S  L +LLL  + +    + DPDPLQD+CVAD K + + F NG PCI+P LA   HF TS
Sbjct: 5   SSLLHILLLSLTLQLLRVKPDPDPLQDYCVADTKPNQTFFINGAPCIDPELATSSHFTTS 64

Query: 66  ALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTIC 125
           AL  PG+TK+N FGF+VTLTN  NLPG+NTLGLTLAR+D+   G+VP HSHPRASEVTIC
Sbjct: 65  ALSKPGSTKTNPFGFNVTLTNKVNLPGLNTLGLTLARVDIAENGIVPPHSHPRASEVTIC 124

Query: 126 LIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQ 185
           L G ++VGFVDT NR+FT+ +  G+SFVFPKGLIHF+YN DL   A A+SGL+SQNPG Q
Sbjct: 125 LKGSVLVGFVDTSNRLFTQTLKEGDSFVFPKGLIHFLYNRDLNNPAFALSGLSSQNPGTQ 184

Query: 186 LLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           L  LA+F SKP IP E+LTK+FQIS+ +++ IRK+LGG
Sbjct: 185 LAALASFTSKPAIPNEILTKAFQISDQDVNRIRKNLGG 222

[Close]
BLAST of Cla013778 vs. NCBI nr
Match: gi|702277369|ref|XP_010044669.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Eucalyptus grandis])

HSP 1 Score: 277.7 bits (709), Expect = 1.8e-71
Identity = 137/215 (63.72%), Postives = 171/215 (79.53%), Query Frame = 1 

Query: 9   LSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTSALH 68
           L+L+L H       AR+DPDPLQD+C+AD++  +    NG PCINPNLA++ HF TSAL 
Sbjct: 17  LALILSH-------ARADPDPLQDYCIADMRNQSPYSVNGAPCINPNLASISHFTTSALS 76

Query: 69  LPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIG 128
             GNTK+N+FGF+VTLTN  NLPG+NT+GLT+ARID+   GLVP HSHPRASEVTICL G
Sbjct: 77  RRGNTKANQFGFNVTLTNTANLPGLNTMGLTMARIDMAGNGLVPPHSHPRASEVTICLEG 136

Query: 129 QMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLG 188
            + VGFVDT  R+FT+ + PGESFVFPKGLIH++YN DLK  A+A+SGL+SQNPGAQ+  
Sbjct: 137 VIGVGFVDTSYRLFTQILRPGESFVFPKGLIHYLYNYDLKNPALAISGLSSQNPGAQIAS 196

Query: 189 LAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           +AAF+SKP IP EVL K+FQI+  +I+ IRK+LGG
Sbjct: 197 VAAFMSKPWIPDEVLGKAFQITGQDIAKIRKNLGG 224

[Close]
BLAST of Cla013778 vs. NCBI nr
Match: gi|296086484|emb|CBI32073.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 272.7 bits (696), Expect = 5.7e-70
Identity = 131/222 (59.01%), Postives = 165/222 (74.32%), Query Frame = 1 

Query: 2   ATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDH 61
           +T P LF+++ LL       L + DPDPLQD+C+AD KAS + F NG+PCI+P LA V H
Sbjct: 5   STLPKLFIAIALLS-----GLVKPDPDPLQDYCIADTKASKAFFINGVPCIDPQLAQVSH 64

Query: 62  FKTSALHLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASE 121
           F TSAL  PGNT +N FGFS+TLTN  NLPG NT+GLT+AR D+   GLVPLHSHPRASE
Sbjct: 65  FTTSALSKPGNTSANPFGFSITLTNTMNLPGFNTMGLTMARADIAANGLVPLHSHPRASE 124

Query: 122 VTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQN 181
           V   L G ++VGF+DT NR+FT+ + PG+SFVFPKG+IHF+YN D    AV ++GLNSQN
Sbjct: 125 VATLLKGALLVGFIDTSNRLFTQLLRPGDSFVFPKGMIHFLYNLDSLAPAVVLAGLNSQN 184

Query: 182 PGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           PG QL   AAF + P +P EVL K+FQIS  +++ IR++LGG
Sbjct: 185 PGTQLTSTAAFATNPRLPDEVLKKAFQISGQDVARIRRNLGG 221

The following BLAST results are available for this feature:
BLAST of Cla013778 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL11_ARATH3.4e-5954.46Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV... [more]
GL31_ORYSJ4.8e-5349.07Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179100 PE=3 SV=... [more]
GL85_ORYSJ9.1e-4445.70Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=... [more]
GL84_ORYSJ4.5e-4346.12Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1[more]
GL811_ORYSJ4.5e-4345.00Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV... [more]
BLAST of Cla013778 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHF1_CUCSA4.3e-10989.73Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404270 PE=3 SV=1[more]
D7TNK0_VITVI3.9e-7059.01Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00970 PE=3 SV=... [more]
A0A0D2PVB6_GOSRA5.2e-7062.21Uncharacterized protein OS=Gossypium raimondii GN=B456_005G187500 PE=3 SV=1[more]
A0A067GSN6_CITSI1.1e-6959.53Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027536mg PE=3 SV=1[more]
V4TEM4_9ROSI2.6e-6959.17Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033943mg PE=3 SV=1[more]
BLAST of Cla013778 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113237|ref|XP_008456470.1|5.6e-11091.48PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo][more]
gi|449458015|ref|XP_004146743.1|6.2e-10989.73PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis sativus][more]
gi|1009153829|ref|XP_015894838.1|9.3e-7362.39PREDICTED: germin-like protein subfamily 1 member 1 [Ziziphus jujuba][more]
gi|702277369|ref|XP_010044669.1|1.8e-7163.72PREDICTED: germin-like protein subfamily 1 member 1 [Eucalyptus grandis][more]
gi|296086484|emb|CBI32073.3|5.7e-7059.01unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR019780Germin_Mn-BS
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0033609 oxalate metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005618 cell wall
cellular_component GO:0005575 cellular_component
cellular_component GO:0048046 apoplast
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0046564 oxalate decarboxylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013778Cla013778.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 144..164
score: 2.8E-20coord: 114..134
score: 2.8E-20coord: 178..193
score: 2.8
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 70..211
score: 1.2
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 65..215
score: 3.9
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 26..219
score: 2.18
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 25..219
score: 4.0
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 109..122
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 6..223
score: 9.2E
NoneNo IPR availablePANTHERPTHR31238:SF5GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1coord: 6..223
score: 9.2E