Cucsa.005550 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.005550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Germin family 1 protein
Location	scaffold00055 : 612575 .. 613249 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCCATCTTTCTTTCTCCATTTATCTTTACTTCTTCTCCATTTATCTTTCAAATTCGACTTTGGTCGTTCTGATCCcGACCCCCTTCAAGATTTCTGTGTAGCCGATCCAAAGGCTTCTACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCAAATTTAGCAACAGTGGATCATTTCAAAaCATCAGCCTTATCTCTCCCAGGAAACACTAAATCCAACCGTTTTGGGTTCAGTGTTACGGTTACAAACCCCCAAAATCTACCTGGAATCAACACATTGGGCTTAACCTTGGCTCGAATCGACCTTGACCCTAGAGGACTCGTGCCACTTCACTCGCACCCACGAGCCTCAGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGGTTTGTGGACACATCTAACCGTGTGTTCACTAAGAAAATTGGACCTGGTGAATCGTTTGTTTTTCCAAAGGGGTTGCTCCATTTTATGTATAATGAAGATTTTAAGAAGTCTGCTGTTGCTGTATCTGGGCTTAATAGCCAAAACCCTGGTGCTCAATTGTTGGCTTTGGCTGTTTTCACTTCTAAACCTGAAATTCCTGAAGAAGTATTGAAGAAATCTTTTCAAATTAGTGAATGTGAAATCGCCCATATTCGTAAGAGTCTTGGAGGTTGA

mRNA sequence

ATGGCAACTCCATCTTTCTTTCTCCATTTATCTTTACTTCTTCTCCATTTATCTTTCAAATTCGACTTTGGTCGTTCTGATCCCGACCCCCTTCAAGATTTCTGTGTAGCCGATCCAAAGGCTTCTACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCAAATTTAGCAACAGTGGATCATTTCAAAACATCAGCCTTATCTCTCCCAGGAAACACTAAATCCAACCGTTTTGGGTTCAGTGTTACGGTTACAAACCCCCAAAATCTACCTGGAATCAACACATTGGGCTTAACCTTGGCTCGAATCGACCTTGACCCTAGAGGACTCGTGCCACTTCACTCGCACCCACGAGCCTCAGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGGTTTGTGGACACATCTAACCGTGTGTTCACTAAGAAAATTGGACCTGGTGAATCGTTTGTTTTTCCAAAGGGGTTGCTCCATTTTATGTATAATGAAGATTTTAAGAAGTCTGCTGTTGCTGTATCTGGGCTTAATAGCCAAAACCCTGGTGCTCAATTGTTGGCTTTGGCTGTTTTCACTTCTAAACCTGAAATTCCTGAAGAAGTATTGAAGAAATCTTTTCAAATTAGTGAATGTGAAATCGCCCATATTCGTAAGAGTCTTGGAGGTTGA

Coding sequence (CDS)

ATGGCAACTCCATCTTTCTTTCTCCATTTATCTTTACTTCTTCTCCATTTATCTTTCAAATTCGACTTTGGTCGTTCTGATCCcGACCCCCTTCAAGATTTCTGTGTAGCCGATCCAAAGGCTTCTACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCAAATTTAGCAACAGTGGATCATTTCAAAaCATCAGCCTTATCTCTCCCAGGAAACACTAAATCCAACCGTTTTGGGTTCAGTGTTACGGTTACAAACCCCCAAAATCTACCTGGAATCAACACATTGGGCTTAACCTTGGCTCGAATCGACCTTGACCCTAGAGGACTCGTGCCACTTCACTCGCACCCACGAGCCTCAGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGGTTTGTGGACACATCTAACCGTGTGTTCACTAAGAAAATTGGACCTGGTGAATCGTTTGTTTTTCCAAAGGGGTTGCTCCATTTTATGTATAATGAAGATTTTAAGAAGTCTGCTGTTGCTGTATCTGGGCTTAATAGCCAAAACCCTGGTGCTCAATTGTTGGCTTTGGCTGTTTTCACTTCTAAACCTGAAATTCCTGAAGAAGTATTGAAGAAATCTTTTCAAATTAGTGAATGTGAAATCGCCCATATTCGTAAGAGTCTTGGAGGTTGA

Protein sequence

MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG*

Homology

[Close]

BLAST of Cucsa.005550 vs. Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 7.5e-62
Identity = 121/213 (56.81%), Postives = 156/213 (73.24%), Query Frame = 1


Query: 13  LLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFF-NGIPCINPNLATVDHFKTSALSLP 72
           +LL L+      +SDPDPLQD+CV+ P +S    F NG  C +P  A+V  F TSALS P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 73  GNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQM 132
           GNTK+  F  +VTVT   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 133 VVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALA 192
           +VGFVDTS RVFT+++ PGE+FVFPKGL+HF+YN D   SA+AVSGL+SQNPG Q+++L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 193 VFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
            F SKP    EVLK ++ I+  ++A IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]

BLAST of Cucsa.005550 vs. Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179100 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.8e-54
Identity = 107/216 (49.54%), Postives = 149/216 (68.98%), Query Frame = 1


Query: 13  LLLHLSFKFDFGRSDPDPLQDFCVADPKASTSS---FFNGIPCINPNLATVDHFKTSALS 72
           +LL L+      R DPD L D+CVAD  A+T++     NG+ CI+P LA  DHF TSALS
Sbjct: 9   ILLSLALFAVLCRCDPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALS 68

Query: 73  LPGNTKSNRFGFSVTVTNPQ-NLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLI 132
              N  +  +GF+ T+T+P  +LPG N  GL +ARIDL P G+ P HSHPRASE  + L 
Sbjct: 69  RATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLS 128

Query: 133 GQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLL 192
           G ++VGF DTS R++T+ +  GE+FVFP+ ++HF+YN D    AV +SGLNSQ+PGAQL+
Sbjct: 129 GSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLV 188

Query: 193 ALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
             + F ++P +P+EVLKK+F+I+  ++  I+K LGG
Sbjct: 189 PFSAFRTEPRLPDEVLKKAFKITGQDVQRIQKHLGG 224

[Close]

BLAST of Cucsa.005550 vs. Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-44
Identity = 98/214 (45.79%), Postives = 139/214 (64.95%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+PSF L  +LL L     +    SDP PLQDFCVAD  +      NG  C++P   T 
Sbjct: 1   MASPSFCLLAALLAL---VSWQAIASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVTA 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHF  +A+ L    K+N+ G +VT+ N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  DHFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTS--NRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGL 180
           +E+   L G + VGFV ++  N +F+K +  G+ FVFP+GL+HF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISE 213
           +SQNPGA  +A AVF SKP I ++VL K+FQ+ +
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDKVLAKAFQVEK 208

[Close]

BLAST of Cucsa.005550 vs. Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.0e-44
Identity = 98/214 (45.79%), Postives = 137/214 (64.02%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+PSF L  +LL L     +    SDP PLQDFCVAD  +      NG  C++P   T 
Sbjct: 1   MASPSFCLFAALLAL---VSWQAIASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVTA 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHF  +A+ L    K+N+ G +VT+ N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  DHFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTS--NRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGL 180
           +E+   L G + VGFV ++  N +F+K +  G+ FVFP GL+HF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISE 213
           +SQNPG   +A AVF SKP I +EVL K+FQ+ +
Sbjct: 181 SSQNPGVITIANAVFGSKPPISDEVLAKAFQVGK 208

[Close]

BLAST of Cucsa.005550 vs. Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 96/214 (44.86%), Postives = 141/214 (65.89%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+PS F  L++LL  +S++     SDP PLQDFCVAD  +      NG  C++P     
Sbjct: 1   MASPSSFCLLAVLLALVSWQAI--ASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVNA 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHF  +A+ L    K+N+ G +VT+ N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  DHFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTS--NRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGL 180
           +E+   L G + VGFV ++  N +F+K +  G+ FVFP+GL+HF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAAL 180

Query: 181 NSQNPGAQLLALAVFTSKPEIPEEVLKKSFQISE 213
           +SQNPGA  +A AVF SKP I +++L K+FQ+ +
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDDILAKAFQVEK 209

[Close]

BLAST of Cucsa.005550 vs. TrEMBL
Match: A0A0A0KHF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404270 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-123
Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MATPSFFLHLSLLLLHLSFKF+FGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]

BLAST of Cucsa.005550 vs. TrEMBL
Match: G7K5M6_MEDTR (Germin family 1 protein OS=Medicago truncatula GN=MTR_5g036570 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.7e-71
Identity = 139/224 (62.05%), Postives = 168/224 (75.00%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           M T   F  L LLL  LS   +   SDPDPLQD+C+AD K   + F NG+PCI+P  AT 
Sbjct: 1   MKTQIHFHTLQLLLFTLSLFLNQCLSDPDPLQDYCIADNK--NTFFLNGLPCIDPKQATS 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
            HF TS+LS PGNT +N FGFSVT TN  NLPG+NTLGL L R+D+   G+VP HSHPRA
Sbjct: 61  SHFATSSLSKPGNT-TNMFGFSVTPTNTINLPGLNTLGLVLVRVDIAGNGIVPPHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVT C+ G ++VGFVDTSNR FT+ + PGESFVFPKGL+HF+YN D K+ A+A+SGLNS
Sbjct: 121 SEVTTCIKGLLLVGFVDTSNRAFTQNLSPGESFVFPKGLVHFLYNRDSKQPAIAISGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQ+ ++A F SKP IP+EVLKK+FQI+  E+  IRK LGG
Sbjct: 181 QNPGAQIASIATFASKPSIPDEVLKKAFQINGQEVDIIRKKLGG 221

[Close]

BLAST of Cucsa.005550 vs. TrEMBL
Match: I3T289_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 138/224 (61.61%), Postives = 168/224 (75.00%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           M T   F  L LLL  LS   +   SDPDPLQD+C+AD K   + F NG+PCI+P  AT 
Sbjct: 1   MKTQIHFHTLQLLLFTLSLFLNQCLSDPDPLQDYCIADNK--NTFFLNGLPCIDPKQATS 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
            HF TS+LS PGNT +N FGFSVT TN  +LPG+NTLGL L R+D+   G+VP HSHPRA
Sbjct: 61  SHFATSSLSKPGNT-TNMFGFSVTPTNTIDLPGLNTLGLVLVRVDIAGNGIVPPHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVT C+ G ++VGFVDTSNR FT+ + PGESFVFPKGL+HF+YN D K+ A+A+SGLNS
Sbjct: 121 SEVTTCIKGLLLVGFVDTSNRAFTQNLSPGESFVFPKGLVHFLYNRDSKQPAIAISGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQ+ ++A F SKP IP+EVLKK+FQI+  E+  IRK LGG
Sbjct: 181 QNPGAQIASIATFASKPSIPDEVLKKAFQINGQEVDIIRKKLGG 221

[Close]

BLAST of Cucsa.005550 vs. TrEMBL
Match: U5G180_POPTR (Germin-like protein subfamily 1 member 1 OS=Populus trichocarpa GN=POPTR_0010s04770g PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-70
Identity = 130/211 (61.61%), Postives = 165/211 (78.20%), Query Frame = 1


Query: 14  LLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGN 73
           LL L+      ++DP PLQD+C+AD   S   + NG PCI+P L+   HF T+ALS PGN
Sbjct: 12  LLTLALLLGSTKADPHPLQDYCIAD--TSKPFYLNGAPCIDPKLSASSHFTTAALSKPGN 71

Query: 74  TKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVV 133
           TK+  +GFSV VTN  NLPG+NT+GLT+AR+DLDP GLVPLHSHPRASEVTIC+ G ++V
Sbjct: 72  TKATPYGFSVKVTNVTNLPGLNTMGLTMARVDLDPNGLVPLHSHPRASEVTICIKGSLLV 131

Query: 134 GFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVF 193
           GFV+TSN VFT+ + PGESFVFP+GL+HF+YN +   SA+AVSGL+SQ+PG Q+ A A F
Sbjct: 132 GFVNTSNYVFTQLLRPGESFVFPRGLIHFLYNMETMDSALAVSGLSSQSPGTQIAAFAAF 191

Query: 194 TSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           TSKP +P+EVLKKSFQIS  ++  IR++LGG
Sbjct: 192 TSKPSMPDEVLKKSFQISNQDVTRIRRNLGG 220

[Close]

BLAST of Cucsa.005550 vs. TrEMBL
Match: D7TNK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00970 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69
Identity = 125/200 (62.50%), Postives = 158/200 (79.00%), Query Frame = 1


Query: 25  RSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGNTKSNRFGFSVT 84
           + DPDPLQD+C+AD KAS + F NG+PCI+P LA V HF TSALS PGNT +N FGFS+T
Sbjct: 22  KPDPDPLQDYCIADTKASKAFFINGVPCIDPQLAQVSHFTTSALSKPGNTSANPFGFSIT 81

Query: 85  VTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVVGFVDTSNRVFT 144
           +TN  NLPG NT+GLT+AR D+   GLVPLHSHPRASEV   L G ++VGF+DTSNR+FT
Sbjct: 82  LTNTMNLPGFNTMGLTMARADIAANGLVPLHSHPRASEVATLLKGALLVGFIDTSNRLFT 141

Query: 145 KKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVFTSKPEIPEEVL 204
           + + PG+SFVFPKG++HF+YN D    AV ++GLNSQNPG QL + A F + P +P+EVL
Sbjct: 142 QLLRPGDSFVFPKGMIHFLYNLDSLAPAVVLAGLNSQNPGTQLTSTAAFATNPRLPDEVL 201

Query: 205 KKSFQISECEIAHIRKSLGG 225
           KK+FQIS  ++A IR++LGG
Sbjct: 202 KKAFQISGQDVARIRRNLGG 221

[Close]

BLAST of Cucsa.005550 vs. TAIR10
Match: AT1G10460.1 (AT1G10460.1 germin-like protein 7)

HSP 1 Score: 238.4 bits (607), Expect = 4.2e-63
Identity = 121/213 (56.81%), Postives = 156/213 (73.24%), Query Frame = 1


Query: 13  LLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFF-NGIPCINPNLATVDHFKTSALSLP 72
           +LL L+      +SDPDPLQD+CV+ P +S    F NG  C +P  A+V  F TSALS P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 73  GNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQM 132
           GNTK+  F  +VTVT   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 133 VVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALA 192
           +VGFVDTS RVFT+++ PGE+FVFPKGL+HF+YN D   SA+AVSGL+SQNPG Q+++L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 193 VFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
            F SKP    EVLK ++ I+  ++A IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]

BLAST of Cucsa.005550 vs. TAIR10
Match: AT3G05950.1 (AT3G05950.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 2.0e-41
Identity = 97/207 (46.86%), Postives = 130/207 (62.80%), Query Frame = 1


Query: 7   FLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTS 66
           FL    +LL L+  F     DP PLQDFCVA   AS   F NG  C +P     + F TS
Sbjct: 7   FLVAKAILLALASSF-VSCYDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTS 66

Query: 67  ALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTIC 126
            L++ GNT  NR G +VT  N   +PG+NTLG++L RID  P G  P H+HPRA+E+ + 
Sbjct: 67  GLNIAGNT-INRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVV 126

Query: 127 LIGQMVVGFVDT---SNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNP 186
           + G ++VGFV +   +NR+F+K + PG+ FVFP G++HF  N   + +AVA +GL SQNP
Sbjct: 127 VEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVG-RTNAVAFAGLGSQNP 186

Query: 187 GAQLLALAVFTSKPEIPEEVLKKSFQI 211
           G   +A AVF SKP I  E+L K+FQ+
Sbjct: 187 GTITIADAVFGSKPSIMPEILAKAFQL 209

[Close]

BLAST of Cucsa.005550 vs. TAIR10
Match: AT3G62020.1 (AT3G62020.1 germin-like protein 10)

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-40
Identity = 91/214 (42.52%), Postives = 125/214 (58.41%), Query Frame = 1


Query: 6   FFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKT 65
           FF  LSL ++ L++       DPD LQD CVAD  +      NG  C   +  T   F  
Sbjct: 9   FFTLLSLNVIVLAY-------DPDTLQDLCVADRTSGIK--VNGFTCKPESNITASDFFF 68

Query: 66  SALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTI 125
           + +  P    +N  G +VT  N + + G+NTLG++LARID  P GL P H+HPRA+EV  
Sbjct: 69  AGIGKPA-VVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIF 128

Query: 126 CLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGA 185
            L G++ VGF+ T+N++F K +  GE FVFP+GL+H+  N D  K A  +S  NSQ PG 
Sbjct: 129 VLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGT 188

Query: 186 QLLALAVFTSKPEIPEEVLKKSFQISECEIAHIR 220
           Q +A  +FT+ P IP+ VL  +FQI   EI  I+
Sbjct: 189 QSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIK 212

[Close]

BLAST of Cucsa.005550 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 8.6e-40
Identity = 90/219 (41.10%), Postives = 126/219 (57.53%), Query Frame = 1


Query: 8   LHLSLLLLHLSFKFDFG-RSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTS 67
           L+L++L L  +    F   SDP PLQDFC+     + + F NG  C +P L T D F  S
Sbjct: 4   LYLAILYLLAASTLPFAIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFS 63

Query: 68  ALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTIC 127
            L     T+S+  G +VT  N   +PG+NTLG++L RID    G  P H+HPRA+E+ + 
Sbjct: 64  GLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLV 123

Query: 128 LIGQMVVGFVDT--SNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPG 187
             G + VGF  +   NR+F K +  G+ FVFP+GL+HF  N   K+ AVA + L+SQNPG
Sbjct: 124 QEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIG-KQPAVAFASLSSQNPG 183

Query: 188 AQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLG 224
             ++   +F SKP I   VL K+FQ+    I  ++K  G
Sbjct: 184 VIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKFG 221

[Close]

BLAST of Cucsa.005550 vs. TAIR10
Match: AT1G09560.1 (AT1G09560.1 germin-like protein 5)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MA+P+  L L LLL  +SF F    +DPD LQD CVAD  +      NG PC +    T 
Sbjct: 1   MASPT--LTLLLLLTTVSF-FISSSADPDMLQDLCVADLPSGIK--INGFPCKDAATVTS 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
             F +  L+ PG T +N FG  VT  N   +PG+NTLG++L+RID  P GL P H+HPRA
Sbjct: 61  ADFFSQGLAKPGLT-NNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           +EV   L G + VGF+ T+N++ ++ +  G+ F FPKGL+HF  N     ++V ++  NS
Sbjct: 121 TEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASV-IAAFNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIR 220
           Q PG Q L   +F S P +P+ +L ++FQ S   + HI+
Sbjct: 181 QLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIK 212

[Close]

BLAST of Cucsa.005550 vs. NCBI nr
Match: gi|449458015|ref|XP_004146743.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 1.5e-123
Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MATPSFFLHLSLLLLHLSFKF+FGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]

BLAST of Cucsa.005550 vs. NCBI nr
Match: gi|659113237|ref|XP_008456470.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo])

HSP 1 Score: 425.6 bits (1093), Expect = 5.3e-116
Identity = 214/224 (95.54%), Postives = 216/224 (96.43%), Query Frame = 1


Query: 1   MATPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60
           MATPSFFL   LLLLHLS KFDF RSDPDPLQDFCVAD KASTSSFFNGIPCINPNLATV
Sbjct: 1   MATPSFFL--LLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120
           DHFKTSALSLPGNTKSNRFGFSVT+TNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           QNPGAQL ALA FTSKPEIP+EVLKKSFQISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]

BLAST of Cucsa.005550 vs. NCBI nr
Match: gi|1009153829|ref|XP_015894838.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Ziziphus jujuba])

HSP 1 Score: 282.7 bits (722), Expect = 5.5e-73
Identity = 137/215 (63.72%), Postives = 169/215 (78.60%), Query Frame = 1


Query: 10  LSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALS 69
           L +LLL L+ +    + DPDPLQD+CVAD K + + F NG PCI+P LAT  HF TSALS
Sbjct: 8   LHILLLSLTLQLLRVKPDPDPLQDYCVADTKPNQTFFINGAPCIDPELATSSHFTTSALS 67

Query: 70  LPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIG 129
            PG+TK+N FGF+VT+TN  NLPG+NTLGLTLAR+D+   G+VP HSHPRASEVTICL G
Sbjct: 68  KPGSTKTNPFGFNVTLTNKVNLPGLNTLGLTLARVDIAENGIVPPHSHPRASEVTICLKG 127

Query: 130 QMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLA 189
            ++VGFVDTSNR+FT+ +  G+SFVFPKGL+HF+YN D    A A+SGL+SQNPG QL A
Sbjct: 128 SVLVGFVDTSNRLFTQTLKEGDSFVFPKGLIHFLYNRDLNNPAFALSGLSSQNPGTQLAA 187

Query: 190 LAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           LA FTSKP IP E+L K+FQIS+ ++  IRK+LGG
Sbjct: 188 LASFTSKPAIPNEILTKAFQISDQDVNRIRKNLGG 222

[Close]

BLAST of Cucsa.005550 vs. NCBI nr
Match: gi|743924962|ref|XP_011006614.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Populus euphratica])

HSP 1 Score: 279.3 bits (713), Expect = 6.1e-72
Identity = 135/211 (63.98%), Postives = 167/211 (79.15%), Query Frame = 1


Query: 14  LLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDHFKTSALSLPGN 73
           LL L+      ++DP PLQD+C+AD   S   + NG PCI+P LA   HF T+ALS PGN
Sbjct: 12  LLTLALLLGSTKADPHPLQDYCIAD--TSKPFYLNGAPCIDPKLAASSHFTTAALSKPGN 71

Query: 74  TKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASEVTICLIGQMVV 133
           TK+  FGFSV +TN  NLPG+NT+GLT+ARIDLDP GLVPLHSHPRASEVTIC+ G ++V
Sbjct: 72  TKATPFGFSVKLTNVTNLPGLNTMGLTMARIDLDPNGLVPLHSHPRASEVTICIKGSLLV 131

Query: 134 GFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQNPGAQLLALAVF 193
           GF+DTSN VFT+ + PGESFVFP+GL+HF+YN +   SA+AVSGL+SQNPGAQ+ A+A F
Sbjct: 132 GFIDTSNYVFTQLLRPGESFVFPRGLIHFLYNMETMGSALAVSGLSSQNPGAQIAAVAAF 191

Query: 194 TSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           TSKP +PEEVLKKSFQIS  ++  IR++LGG
Sbjct: 192 TSKPSMPEEVLKKSFQISNQDVTRIRRNLGG 220

[Close]

BLAST of Cucsa.005550 vs. NCBI nr
Match: gi|702277369|ref|XP_010044669.1| (PREDICTED: germin-like protein subfamily 1 member 1 [Eucalyptus grandis])

HSP 1 Score: 276.6 bits (706), Expect = 4.0e-71
Identity = 139/222 (62.61%), Postives = 173/222 (77.93%), Query Frame = 1


Query: 3   TPSFFLHLSLLLLHLSFKFDFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATVDH 62
           TPS    L +L L LS      R+DPDPLQD+C+AD +  +    NG PCINPNLA++ H
Sbjct: 7   TPSPLRTLVVLALILSH----ARADPDPLQDYCIADMRNQSPYSVNGAPCINPNLASISH 66

Query: 63  FKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRASE 122
           F TSALS  GNTK+N+FGF+VT+TN  NLPG+NT+GLT+ARID+   GLVP HSHPRASE
Sbjct: 67  FTTSALSRRGNTKANQFGFNVTLTNTANLPGLNTMGLTMARIDMAGNGLVPPHSHPRASE 126

Query: 123 VTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQN 182
           VTICL G + VGFVDTS R+FT+ + PGESFVFPKGL+H++YN D K  A+A+SGL+SQN
Sbjct: 127 VTICLEGVIGVGFVDTSYRLFTQILRPGESFVFPKGLIHYLYNYDLKNPALAISGLSSQN 186

Query: 183 PGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 225
           PGAQ+ ++A F SKP IP+EVL K+FQI+  +IA IRK+LGG
Sbjct: 187 PGAQIASVAAFMSKPWIPDEVLGKAFQITGQDIAKIRKNLGG 224

The following BLAST results are available for this feature:

BLAST of Cucsa.005550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GL11_ARATH	7.5e-62	56.81	Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV...	[more]
GL31_ORYSJ	9.8e-54	49.54	Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179100 PE=3 SV=...	[more]
GL88_ORYSJ	4.1e-44	45.79	Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=...	[more]
GL89_ORYSJ	7.0e-44	45.79	Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=...	[more]
GL87_ORYSJ	1.2e-43	44.86	Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1	[more]

BLAST of Cucsa.005550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHF1_CUCSA	1.1e-123	99.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404270 PE=3 SV=1	[more]
G7K5M6_MEDTR	4.7e-71	62.05	Germin family 1 protein OS=Medicago truncatula GN=MTR_5g036570 PE=3 SV=1	[more]
I3T289_MEDTR	1.8e-70	61.61	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
U5G180_POPTR	8.9e-70	61.61	Germin-like protein subfamily 1 member 1 OS=Populus trichocarpa GN=POPTR_0010s04...	[more]
D7TNK0_VITVI	1.5e-69	62.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00970 PE=3 SV=...	[more]

BLAST of Cucsa.005550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10460.1	4.2e-63	56.81	germin-like protein 7	[more]
AT3G05950.1	2.0e-41	46.86	RmlC-like cupins superfamily protein	[more]
AT3G62020.1	3.8e-40	42.52	germin-like protein 10	[more]
AT5G38960.1	8.6e-40	41.10	RmlC-like cupins superfamily protein	[more]
AT1G09560.1	1.5e-39	42.47	germin-like protein 5	[more]

BLAST of Cucsa.005550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458015\|ref\|XP_004146743.1\|	1.5e-123	99.55	PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis sativus]	[more]
gi\|659113237\|ref\|XP_008456470.1\|	5.3e-116	95.54	PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo]	[more]
gi\|1009153829\|ref\|XP_015894838.1\|	5.5e-73	63.72	PREDICTED: germin-like protein subfamily 1 member 1 [Ziziphus jujuba]	[more]
gi\|743924962\|ref\|XP_011006614.1\|	6.1e-72	63.98	PREDICTED: germin-like protein subfamily 1 member 1 [Populus euphratica]	[more]
gi\|702277369\|ref\|XP_010044669.1\|	4.0e-71	62.61	PREDICTED: germin-like protein subfamily 1 member 1 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001929	Germin
IPR006045	Cupin_1
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll
IPR019780	Germin_Mn-BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0030145	manganese ion binding
GO:0045735	nutrient reservoir activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0045735	nutrient reservoir activity
molecular_function	GO:0004784	superoxide dismutase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.005550.1	Cucsa.005550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 115..135 score: 2.0E-21coord: 179..194 score: 2.0E-21coord: 145..165 score: 2.0
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 69..212 score: 9.7
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 66..216 score: 1.0
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 27..220 score: 1.21
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 26..220 score: 9.4
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 110..123 scor
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 1..224 score: 4.0E
None	No IPR available	PANTHER	PTHR31238:SF5	GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1	coord: 1..224 score: 4.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.005550	Csa6G404270	Cucumber (Chinese Long) v2	cgycuB051
Cucsa.005550	MELO3C019788	Melon (DHL92) v3.5.1	cgymeB054
Cucsa.005550	CSPI06G21280	Wild cucumber (PI 183967)	cgycpiB051
Cucsa.005550	CmaCh12G007160	Cucurbita maxima (Rimu)	cgycmaB0093
Cucsa.005550	CmoCh12G006490	Cucurbita moschata (Rifu)	cgycmoB0088
Cucsa.005550	Lsi08G007320	Bottle gourd (USVL1VR-Ls)	cgylsiB054
Cucsa.005550	Cp4.1LG07g05560	Cucurbita pepo (Zucchini)	cgycpeB0090
Cucsa.005550	MELO3C019788.2	Melon (DHL92) v3.6.1	cgymedB053
Cucsa.005550	CsaV3_6G036330	Cucumber (Chinese Long) v3	cgycucB053

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.005550	Cucurbita maxima (Rimu)	cgycmaB0096
Cucsa.005550	Cucurbita pepo (Zucchini)	cgycpeB0088