Csa6G344240 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G344240
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Basic blue copper protein; contains IPR008972 (Cupredoxin)
Location	Chr6 : 15631000 .. 15633064 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATTGTCATTTCCATTTGTTTCAGTATATAATATAAAGAAGTAGAAAAAGAAAGAGAAGAAAAGGAAGGGAAAATGGGAATTAAGGTGGGTGAGGGAAGAGGCAGTGCAATCGAAAGAGCCGTCGCTGTTGCCGCCGTTATAGGGTTAGTTATGATGTCTCAGTTGGAAAGCGTGGAGGCAGCCGTTTACGATGTCGGGGGCTCCGGTGGATGGACCTTTAACACCGAAAGTTGGCCCAAAGGAAAACGTTTTCGTGCCGGTGATATTCTCCGTAAGTCCACTCCTCCCTCCATTTTTATTTCTTAAAAGATTTAGGGAAAAAGAGTTTTATTCTTAGGATGTGTTAGAGTTTAACATTTTCTACTTTTCTTCCTCGGTTGAATTGAGTTGCGAGTTCACAAAAGAAAAAAATGACCTAATCTAACTCAAATTATATATTTTTTAAAGTTTGGTTATTTAGATGGATTCATTTGTGAACTTTTAATATTTTTCTTATAGAATTGATATGATATTTTTTTTATAAAATTTTTATATTTTATATTTGAATTTAATAAAATTTTAGTTATTAATCATATGATTTAGAAATTTAGAAATTTACGAATTTAAGATTAAAATAAAACAATAAGCTATGACCTTGATAACAACCTGAAGTTGTCAATTAAATTTTAACTCAAATTCTGAAGTTATCAAATCAACCTAATTACTTATGTATGTATTTACCAACATCTAAGAAATATGTGTTTCCAATACCATTAAATAGAAAGAAAAAAAATGTATTGGGCATTTCTCAGTATAGTTTCTAATGTGAGATCCATACTTTAATTTTCGTGTTTCTTTTCTTTAATAATTAAAATTAAATTGTTACATTTTTCTATTTTGATTTTGATTTTGTCGGTAGTTTTTACTGTTGAATTATTTCGAAAAATTGTTATAAAATATTTACCTTCCCTAGAAAATTCGAAGGGTAATTTTCGTGATTTTGTAAATAGTTTACCTATTTTTTCTATTTTTGAAAAAACTTTTTAATTATTTTATTTTCATTTAATTTCTAATCGAACAATTAGTTTAGATGGGATTGTCAATATTAATTTTTATTAATTTTTGACTGGAAAAAAATAAATTAACAAACAAACAAACAAGTCTTTTCTTTAAATTCAATATTAATTTTTATTAATTAACTGTAAAAGTATTAAATTAATTTATTCAATATTTTTAAACTTTTATACTTTAAAATTTTATTAAAATAAAGTTTTAATGTGTATACAAATTTTTCTTCACTATCAAAACTAAGTAAAAGGAATTCACATTGTCTGATTATAAATTCAACAAAAACCCTCTTGTCAAATTAAATTAAATTCAAAACTAACCAAACATGCTAATTTTTATTTATAAATATAGTCAAAATATAGCTCAACTTTATTTATTATCTACTAATAATAATCAGTAACATATTTGATTTTTTCCTTAGTAAAAAACACAAAATTTAGAATATTTGTAAATAAATTTAACATTTAAAACTATTTTTCAAAATAAAGAACACTACCAAATCAAAATTAAACTCGGAAGGGTTGGTTAGTAACGTAATTGATGGAGGAAAATGGTATTTAAATTATTTTGTGGAAACATAAATATATAGTGGGTAAATTTGTTTGCAGGGTTCAATTACAACCCATTAGTGCATAACGTGGTGGTGGTGAACCAAGGTGGGTTCTCCACCTGCAACACTCCGGCGGGTGCCAAAGTGTACAAGTCCGGCAGTGATCAGATCAAATTACCCAAAGGACAAAGCTATTTCATCTGCAACTTCCCCGGCCACTGTCAGTCCGGCATGAAGATCGCCGTCAATGCTCTCTAATCTATAATAGTTTCACCCTTTTTTTTGATATGTTTATTTACTGCTTTTAAAATAAAAAGTTATTGTATGTGTTGTCCTTTATTTACATAACTATATACTATATTATGGTGGGAGTCTTTCCTTTTTCTTTTTCTTTACTTTTTTCTCTTTTTTCTAGTTGAAATGTCATTTACTTTTTTCCAAACTTATATAACTCATTTCATCATA

mRNA sequence

ATGGGAATTAAGGTGGGTGAGGGAAGAGGCAGTGCAATCGAAAGAGCCGTCGCTGTTGCCGCCGTTATAGGGTTAGTTATGATGTCTCAGTTGGAAAGCGTGGAGGCAGCCGTTTACGATGTCGGGGGCTCCGGTGGATGGACCTTTAACACCGAAAGTTGGCCCAAAGGAAAACGTTTTCGTGCCGGTGATATTCTCCGGTTCAATTACAACCCATTAGTGCATAACGTGGTGGTGGTGAACCAAGGTGGGTTCTCCACCTGCAACACTCCGGCGGGTGCCAAAGTGTACAAGTCCGGCAGTGATCAGATCAAATTACCCAAAGGACAAAGCTATTTCATCTGCAACTTCCCCGGCCACTGTCAGTCCGGCATGAAGATCGCCGTCAATGCTCTCTAA

Coding sequence (CDS)

ATGGGAATTAAGGTGGGTGAGGGAAGAGGCAGTGCAATCGAAAGAGCCGTCGCTGTTGCCGCCGTTATAGGGTTAGTTATGATGTCTCAGTTGGAAAGCGTGGAGGCAGCCGTTTACGATGTCGGGGGCTCCGGTGGATGGACCTTTAACACCGAAAGTTGGCCCAAAGGAAAACGTTTTCGTGCCGGTGATATTCTCCGGTTCAATTACAACCCATTAGTGCATAACGTGGTGGTGGTGAACCAAGGTGGGTTCTCCACCTGCAACACTCCGGCGGGTGCCAAAGTGTACAAGTCCGGCAGTGATCAGATCAAATTACCCAAAGGACAAAGCTATTTCATCTGCAACTTCCCCGGCCACTGTCAGTCCGGCATGAAGATCGCCGTCAATGCTCTCTAA

Protein sequence

MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL*

Homology

[Close]

BLAST of Csa6G344240 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.3e-49
Identity = 90/96 (93.75%), Postives = 89/96 (92.71%), Query Frame = 1


Query: 37  AVYDVGGSGGWTFNTESWPKGKRFRAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKV 96
           AVY VGGSGGWTFNTESWPKGKRFRAGDIL FNYNP +HNVVVVNQGGFSTCNTPAGAKV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 97  YKSGSDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 133
           Y SG DQIKLPKGQSYFICNFPGHCQSGMKIAVNAL
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96

[Close]

BLAST of Csa6G344240 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 3.8e-37
Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = 1


Query: 5   VGEGRGSAIERAVAVAAVIGL-VMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAG 64
           + +GRGSA   A A+  ++ + V++ Q + V+AA Y VG SG WTFN   WPKGK FRAG
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAG 60

Query: 65  DILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQS 124
           D+L FNYNP +HNVV V+ G ++ C TP GAK Y SG D+I L KGQ++FICNFP HC+S
Sbjct: 61  DVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCES 120

Query: 125 GMKIAVNAL 133
            MKIAV A+
Sbjct: 121 DMKIAVTAV 129

[Close]

BLAST of Csa6G344240 vs. Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-33
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 1


Query: 5   VGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGD 64
           + +G GSA ERA+ +  V+ + ++   E  E+ VY VG  GGWTF T  WP GK FRAGD
Sbjct: 1   MAQGSGSA-ERALVLGVVL-VFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGD 60

Query: 65  ILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSG 124
           +L F YNP VHNVV V  GG+ +C    G++V+KSG D+I L +G +YFIC+ PGHCQ G
Sbjct: 61  VLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGG 120

Query: 125 MKIAVNA 132
           +KIAV A
Sbjct: 121 LKIAVTA 125

[Close]

BLAST of Csa6G344240 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-17
Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 1


Query: 36  AAVYDVGGSGGWT----FNTESWPKGKRFRAGDILRFNYNPLVHNVVVVNQGGFSTCNTP 95
           A V+ VG S GWT    ++   W    +F  GD L FNYN   HNV+ V+Q  F +CN+ 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 96  AGAKVYKSGSDQIKLPK-GQSYFICNFPGHCQSGMKIAV 130
           + A  Y SG+D I L + G  YF+C  PGHCQ G K+ +
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99

[Close]

BLAST of Csa6G344240 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 1


Query: 19  VAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTES--WPKGKRFRAGDILRFNYNPLVHN 78
           VAA + L+ ++ + +V AA + VG   GWT N +   W  GK FR GD L F Y  L H+
Sbjct: 5   VAAAL-LLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYG-LSHS 64

Query: 79  VVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 133
           V VV++ G+  C++    + +  G  +I L   G  +F+C   GHC++GMK+AV  L
Sbjct: 65  VSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVL 119

[Close]

BLAST of Csa6G344240 vs. TrEMBL
Match: A0A0A0KCU9_CUCSA (Basic blue protein OS=Cucumis sativus GN=Csa_6G344240 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 5.2e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRF 60
           MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRF
Sbjct: 1   MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRF 60

Query: 61  RAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGH 120
           RAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGH
Sbjct: 61  RAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGH 120

Query: 121 CQSGMKIAVNAL 133
           CQSGMKIAVNAL
Sbjct: 121 CQSGMKIAVNAL 132

[Close]

BLAST of Csa6G344240 vs. TrEMBL
Match: M5VJM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018507mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 81/126 (64.29%), Postives = 100/126 (79.37%), Query Frame = 1


Query: 7   EGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDIL 66
           +GRGSA      +  V+ L +M QL    AA Y VG SGGW+FNT+SWP GK+FRAGD+L
Sbjct: 4   QGRGSA----GTIGVVVVLCLMVQLGCSNAATYKVGESGGWSFNTDSWPNGKQFRAGDVL 63

Query: 67  RFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMK 126
            FNY+P +HNVV V++GG+S+C TP GAKVYKSG DQI+L +GQ+YFICNFPGHCQSGMK
Sbjct: 64  SFNYDPTLHNVVAVDKGGYSSCTTPNGAKVYKSGKDQIRLGRGQNYFICNFPGHCQSGMK 123

Query: 127 IAVNAL 133
           IA+NA+
Sbjct: 124 IAINAV 125

[Close]

BLAST of Csa6G344240 vs. TrEMBL
Match: U7DXK2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0487s00220g PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.3e-40
Identity = 82/125 (65.60%), Postives = 100/125 (80.00%), Query Frame = 1


Query: 7   EGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDIL 66
           +GRGSA    V VAA++ L++++    V AA Y VGGSGGWT N +SWPKGKRF+AGD L
Sbjct: 3   QGRGSADLVMVNVAALLCLMVLTG--HVHAATYTVGGSGGWTLNMDSWPKGKRFKAGDTL 62

Query: 67  RFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMK 126
            F Y+P +HNVV VN+GG+S+C TPAGAKVYKSG DQIKL KGQ++FICN  GHC+SGMK
Sbjct: 63  VFTYDPTIHNVVAVNRGGYSSCITPAGAKVYKSGKDQIKLSKGQNFFICNVAGHCESGMK 122

Query: 127 IAVNA 132
           IA+NA
Sbjct: 123 IAINA 125

[Close]

BLAST of Csa6G344240 vs. TrEMBL
Match: A0A059BYZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04279 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.3e-40
Identity = 80/128 (62.50%), Postives = 95/128 (74.22%), Query Frame = 1


Query: 5   VGEGRGSAIERAVAVAAVIGLV-MMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAG 64
           + +GRGSA   A A A  + L+ + +Q E   AA Y VGGSGGWT N  SWPKGKRFRAG
Sbjct: 1   MSQGRGSASRVATAAAVAVALIYLFAQAEYARAATYTVGGSGGWTLNVASWPKGKRFRAG 60

Query: 65  DILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQS 124
           D L F Y+  +HNVV +N+GG+ +C TP GAKVY SG+DQIKL KG +YFICNFPGHC+S
Sbjct: 61  DTLIFKYDRTLHNVVALNKGGYDSCRTPGGAKVYSSGNDQIKLVKGPNYFICNFPGHCES 120

Query: 125 GMKIAVNA 132
            MKIAVNA
Sbjct: 121 AMKIAVNA 128

[Close]

BLAST of Csa6G344240 vs. TrEMBL
Match: E0CQL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15240 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.7e-40
Identity = 77/126 (61.11%), Postives = 97/126 (76.98%), Query Frame = 1


Query: 7   EGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDIL 66
           EGRGSA    + +   +  +++     V  A Y VGGS GWTFN+ +WPKGKRFRAGD+L
Sbjct: 50  EGRGSAGRAMLLIMVAVIYLLIQYSAPVHGATYTVGGSAGWTFNSANWPKGKRFRAGDVL 109

Query: 67  RFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMK 126
            FNY+  VHNVV VN+GG+S+C TPAGAKVY+SG +QIKL KGQ++FICN+ GHC+SGMK
Sbjct: 110 AFNYDSKVHNVVAVNEGGYSSCTTPAGAKVYQSGKEQIKLVKGQNFFICNYAGHCESGMK 169

Query: 127 IAVNAL 133
           IAVNA+
Sbjct: 170 IAVNAV 175

[Close]

BLAST of Csa6G344240 vs. TAIR10
Match: AT2G02850.1 (AT2G02850.1 plantacyanin)

HSP 1 Score: 155.6 bits (392), Expect = 2.1e-38
Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = 1


Query: 5   VGEGRGSAIERAVAVAAVIGL-VMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAG 64
           + +GRGSA   A A+  ++ + V++ Q + V+AA Y VG SG WTFN   WPKGK FRAG
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAG 60

Query: 65  DILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQS 124
           D+L FNYNP +HNVV V+ G ++ C TP GAK Y SG D+I L KGQ++FICNFP HC+S
Sbjct: 61  DVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCES 120

Query: 125 GMKIAVNAL 133
            MKIAV A+
Sbjct: 121 DMKIAVTAV 129

[Close]

BLAST of Csa6G344240 vs. TAIR10
Match: AT1G17800.1 (AT1G17800.1 early nodulin-like protein 22)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17
Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = 1


Query: 8   GRGSAIERAVAVAAVIGLVMMSQLESVEAA----VYDVGGSGGW--TFNTESWPKGKRFR 67
           G  S +   V +A V+ ++ +    +V  A     Y VGG  GW      ++W +GK F 
Sbjct: 6   GHVSYVAVTVPIAIVMTVLCLFLANAVTYARRPTTYIVGGDDGWDPVVPMDTWARGKTFY 65

Query: 68  AGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNF-PGH 127
           AGDIL F Y+    N++VVN+ G+ TC    GA  Y SG D+I+L  G +YFI  + P  
Sbjct: 66  AGDILEFKYDYQRFNLIVVNRTGYETCEANVGAIEYSSGDDKIQLNYGYNYFIGTYTPED 125

Query: 128 CQSGMKIAVNAL 133
           C +G+K+A+ AL
Sbjct: 126 CTTGLKMAIKAL 137

[Close]

BLAST of Csa6G344240 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17
Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 1


Query: 16  AVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTE--SWPKGKRFRAGDILRFNYNPL 75
           + A  A++ L+++  + +V A  + VG + GWT   E  SW   K FR GD L F Y P 
Sbjct: 3   STAATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPS 62

Query: 76  VHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 133
            H+V VVN+  +  C T    + +  G  +I L K G  +F+C  PGHC  GMK+AV  L
Sbjct: 63  -HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVL 121

[Close]

BLAST of Csa6G344240 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 77.8 bits (190), Expect = 5.6e-15
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 1


Query: 19  VAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTES--WPKGKRFRAGDILRFNYNPLVHN 78
           VAA + L+ ++ + +V AA + VG   GWT N +   W  GK FR GD L F Y  L H+
Sbjct: 5   VAAAL-LLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYG-LSHS 64

Query: 79  VVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 133
           V VV++ G+  C++    + +  G  +I L   G  +F+C   GHC++GMK+AV  L
Sbjct: 65  VSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVL 119

[Close]

BLAST of Csa6G344240 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 37/114 (32.46%), Postives = 55/114 (48.25%), Query Frame = 1


Query: 22  VIGLVMMSQLESVEAAVYDVGGSGGWTFNTE--SWPKGKRFRAGDILRFNYNPLVHNVVV 81
           +I ++  + +    A  + +GG  GWT      +W  G+ F  GD L F+Y    H+VV 
Sbjct: 9   IISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVE 68

Query: 82  VNQGGFSTCNTPAGAKVYKSGSDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 133
           V +  F +C        + +G+  + L   G+ YFIC  PGHC  GMK+ VN +
Sbjct: 69  VTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVV 122

[Close]

BLAST of Csa6G344240 vs. NCBI nr
Match: gi|778714946|ref|XP_004144257.2| (PREDICTED: basic blue protein [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 7.5e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRF 60
           MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRF
Sbjct: 1   MGIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRF 60

Query: 61  RAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGH 120
           RAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGH
Sbjct: 61  RAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGH 120

Query: 121 CQSGMKIAVNAL 133
           CQSGMKIAVNAL
Sbjct: 121 CQSGMKIAVNAL 132

[Close]

BLAST of Csa6G344240 vs. NCBI nr
Match: gi|659082080|ref|XP_008441659.1| (PREDICTED: basic blue protein-like, partial [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 2.5e-57
Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = 1


Query: 2   GIKVGEGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFR 61
           GIKVGEGRGSAI R VAVAAVIGLVMMSQLESVEAAVYDVGGS GWTFN ++WPKG RFR
Sbjct: 17  GIKVGEGRGSAIGRGVAVAAVIGLVMMSQLESVEAAVYDVGGSSGWTFNVQNWPKGIRFR 76

Query: 62  AGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHC 121
           AGDIL+FNY+  +HNVVVVN+ G+++C TP GAKVY +GSDQIKLPKGQSYFICNFPGHC
Sbjct: 77  AGDILKFNYDSSIHNVVVVNKAGYASCKTPGGAKVYNTGSDQIKLPKGQSYFICNFPGHC 136

Query: 122 QSGMKIAVNAL 133
           ++GMKIAVNAL
Sbjct: 137 EAGMKIAVNAL 147

[Close]

BLAST of Csa6G344240 vs. NCBI nr
Match: gi|114806|sp|P00303.1|BABL_CUCSA (RecName: Full=Basic blue protein; AltName: Full=CBP; AltName: Full=Cusacyanin; AltName: Full=Plantacyanin)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-46
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 37  AVYDVGGSGGWTFNTESWPKGKRFRAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKV 96
           AVY VGGSGGWTFNTESWPKGKRFRAGDIL FNYNP +HNVVVVNQGGFSTCNTPAGAKV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 97  YKSGSDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 133
           Y SG DQIKLPKGQSYFICNFPGHCQSGMKIAVNAL
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96

[Close]

BLAST of Csa6G344240 vs. NCBI nr
Match: gi|157834735|pdb|2CBP|A (Chain A, Cucumber Basic Protein, A Blue Copper Protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-46
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 37  AVYDVGGSGGWTFNTESWPKGKRFRAGDILRFNYNPLVHNVVVVNQGGFSTCNTPAGAKV 96
           AVY VGGSGGWTFNTESWPKGKRFRAGDIL FNYNP +HNVVVVNQGGFSTCNTPAGAKV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 97  YKSGSDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 133
           Y SG DQIKLPKGQSYFICNFPGHCQSGMKIAVNAL
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96

[Close]

BLAST of Csa6G344240 vs. NCBI nr
Match: gi|595792743|ref|XP_007200120.1| (hypothetical protein PRUPE_ppa018507mg [Prunus persica])

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-41
Identity = 81/126 (64.29%), Postives = 100/126 (79.37%), Query Frame = 1


Query: 7   EGRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDIL 66
           +GRGSA      +  V+ L +M QL    AA Y VG SGGW+FNT+SWP GK+FRAGD+L
Sbjct: 4   QGRGSA----GTIGVVVVLCLMVQLGCSNAATYKVGESGGWSFNTDSWPNGKQFRAGDVL 63

Query: 67  RFNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMK 126
            FNY+P +HNVV V++GG+S+C TP GAKVYKSG DQI+L +GQ+YFICNFPGHCQSGMK
Sbjct: 64  SFNYDPTLHNVVAVDKGGYSSCTTPNGAKVYKSGKDQIRLGRGQNYFICNFPGHCQSGMK 123

Query: 127 IAVNAL 133
           IA+NA+
Sbjct: 124 IAINAV 125

The following BLAST results are available for this feature:

BLAST of Csa6G344240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BABL_CUCSA	7.3e-49	93.75	Basic blue protein OS=Cucumis sativus PE=1 SV=1	[more]
BABL_ARATH	3.8e-37	56.59	Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2	[more]
BABL_LILLO	1.9e-33	52.76	Chemocyanin OS=Lilium longiflorum PE=1 SV=1	[more]
MAVI_CUCPE	5.7e-17	43.43	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]
BCB3_ARATH	1.0e-13	38.46	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]

BLAST of Csa6G344240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU9_CUCSA	5.2e-70	100.00	Basic blue protein OS=Cucumis sativus GN=Csa_6G344240 PE=4 SV=1	[more]
M5VJM1_PRUPE	1.8e-41	64.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018507mg PE=4 SV=1	[more]
U7DXK2_POPTR	4.3e-40	65.60	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0487s00220g PE=4 SV=1	[more]
A0A059BYZ9_EUCGR	4.3e-40	62.50	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04279 PE=4 SV=1	[more]
E0CQL6_VITVI	5.7e-40	61.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15240 PE=4 SV=...	[more]

BLAST of Csa6G344240 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02850.1	2.1e-38	56.59	plantacyanin	[more]
AT1G17800.1	1.2e-17	37.88	early nodulin-like protein 22	[more]
AT3G60270.1	1.2e-17	38.33	Cupredoxin superfamily protein	[more]
AT3G60280.1	5.6e-15	38.46	uclacyanin 3	[more]
AT2G32300.1	1.1e-13	32.46	uclacyanin 1	[more]

BLAST of Csa6G344240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714946\|ref\|XP_004144257.2\|	7.5e-70	100.00	PREDICTED: basic blue protein [Cucumis sativus]	[more]
gi\|659082080\|ref\|XP_008441659.1\|	2.5e-57	82.44	PREDICTED: basic blue protein-like, partial [Cucumis melo]	[more]
gi\|114806\|sp\|P00303.1\|BABL_CUCSA	1.2e-46	93.75	RecName: Full=Basic blue protein; AltName: Full=CBP; AltName: Full=Cusacyanin; A...	[more]
gi\|157834735\|pdb\|2CBP\|A	1.5e-46	93.75	Chain A, Cucumber Basic Protein, A Blue Copper Protein	[more]
gi\|595792743\|ref\|XP_007200120.1\|	2.5e-41	64.29	hypothetical protein PRUPE_ppa018507mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048513	animal organ development
biological_process	GO:0009987	cellular process
biological_process	GO:0009908	flower development
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0048316	seed development
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU086812	cucumber EST collection version 3.0	transcribed_cluster
CU089902	cucumber EST collection version 3.0	transcribed_cluster
CU103322	cucumber EST collection version 3.0	transcribed_cluster
CU106930	cucumber EST collection version 3.0	transcribed_cluster
CU123954	cucumber EST collection version 3.0	transcribed_cluster
CU125694	cucumber EST collection version 3.0	transcribed_cluster
CU125945	cucumber EST collection version 3.0	transcribed_cluster
CU132501	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G344240.1	Csa6G344240.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU125694	CU125694	transcribed_cluster
CU086812	CU086812	transcribed_cluster
CU089902	CU089902	transcribed_cluster
CU103322	CU103322	transcribed_cluster
CU106930	CU106930	transcribed_cluster
CU125945	CU125945	transcribed_cluster
CU123954	CU123954	transcribed_cluster
CU132501	CU132501	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 68..131 score: 3.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 47..125 score: 5.1
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 37..132 score: 36
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 35..131 score: 2.9
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 37..131 score: 5.35
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 7..132 score: 2.1
None	No IPR available	PANTHER	PTHR33021:SF9	BASIC BLUE PROTEIN	coord: 7..132 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G344240	Cla013872	Watermelon (97103) v1	cuwmB468
Csa6G344240	MELO3C008424	Melon (DHL92) v3.5.1	cumeB468
Csa6G344240	ClCG08G006340	Watermelon (Charleston Gray)	cuwcgB507
Csa6G344240	Lsi08G005120	Bottle gourd (USVL1VR-Ls)	culsiB481
Csa6G344240	MELO3C008424.2	Melon (DHL92) v3.6.1	cumedB450
Csa6G344240	Cla97C08G149130	Watermelon (97103) v2	cuwmbB498
Csa6G344240	Bhi04G001432	Wax gourd	cuwgoB573
Csa6G344240	CSPI06G18200	Wild cucumber (PI 183967)	cpicuB313
Csa6G344240	Cucsa.077170	Cucumber (Gy14) v1	cgycuB074
Csa6G344240	CmoCh15G006420	Cucurbita moschata (Rifu)	cmocuB299
Csa6G344240	Cp4.1LG13g04400	Cucurbita pepo (Zucchini)	cpecuB200
Csa6G344240	CsGy6G017680	Cucumber (Gy14) v2	cgybcuB281
Csa6G344240	Carg01572	Silver-seed gourd	carcuB0852

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G344240	Silver-seed gourd	carcuB0067
Csa6G344240	Cucurbita maxima (Rimu)	cmacuB038
Csa6G344240	Cucurbita maxima (Rimu)	cmacuB311
Csa6G344240	Cucurbita maxima (Rimu)	cmacuB771
Csa6G344240	Cucurbita moschata (Rifu)	cmocuB026
Csa6G344240	Cucurbita moschata (Rifu)	cmocuB762
Csa6G344240	Cucurbita pepo (Zucchini)	cpecuB463
Csa6G344240	Cucurbita pepo (Zucchini)	cpecuB795