CmoCh15G006420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G006420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	copper ion binding;electron carriers
Location	Cmo_Chr15 : 3117999 .. 3120777 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTGTGGAAGGAGGCCAAGGGGTTGCGCTCCGACGACACTGTCAGCCAGATTGGAATAAATTGGAAGCTCCTAAAGTCTAAAATTGTGGGCACCGCCGATCAGTGGAAGTAGTTGGATGAAATTAATACGGTAACACATTGCCTTGTACAAAGCTCACCAACTTTCCTAATTTTTGTGTACCCTATTCATTTCCTTATTTATAACCCCAAGTTAATTCCGGCCTTGGGGTCTTATAAAATCACCTCCTTTGGCCTTCATAAACGCACCCAAATTGACCTGAAACTAAAAGCTAAGGCTCCGGAGGAAAGAATTATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAACGTACAAGGTTGGCCCAATGGCAAACACTTTCGTGCTGGCGATACTCTCAGTAAGCTCCTCCACTATTTTTCTTCTTTTTCTTTTTTTTTTTTTTCAAAAAATTAAAGGAAAACATGGACCATTGTTCGGACGGAGTCTACATTCGCTAATTTAAATGGTATGAGGCCCCTTTTGGTGAATCCTAAAACAAACCTATGACAAGATTCCTGGCATGGTATCAGAGTCATGCCTTTAACTGGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGAGTCATGCCCTTAACTAAAACAATATCATACCATTGTGGAGAATTCCGATTCCTAATATGGTATTAGAGTCATGCTCTTAACTTAGCATGTCAATAAAATCGTCAAATGTCGAACAAAGGAGTCGAGCCTCGAAGGTGTAGTAAAAAATACAAGTGTTGAACAAAGGGTATACTTTGTTCAAGGACTAAAGAGAAAAGAGTTGAGGGGCTGTTCGATGGCTATATAGGTCTTAGGAGGAGAGTCTCTATAGTGTACTTTATTCCATCCGGAGTCAAGACATTGATTAATCTAATGAATGATCCGGTTGGTACGAGATCTTTTGCAGAAACTAGAGAGTTAGTGAACAATATCATTCTATTGTGAACAAAATATTTGTTTGCAGAGTTCAATTACGACCGGACAATTCATAACGTGGTGGTGGTGAATCAAGGTGGGTACACGAGCTGCCTGACTCCGGCGGGAGCGAAAGTTTTCACCTCCGGTAGCGACCAGATAAAGCTGGCGAAGGGAATGAACTATTTCATCTGCAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCCGTGAATGCTCTCTAA

mRNA sequence

GCGTGTGGAAGGAGGCCAAGGGGTTGCGCTCCGACGACACTGTCAGCCAGATTGGAATAAATTGGAAGCTCCTAAAGTCTAAAATTGTGGGCACCGCCGATCAGTGGAAGTAGTTGGATGAAATTAATACGGTAACACATTGCCTTGTACAAAGCTCACCAACTTTCCTAATTTTTGTGTACCCTATTCATTTCCTTATTTATAACCCCAAGTTAATTCCGGCCTTGGGGTCTTATAAAATCACCTCCTTTGGCCTTCATAAACGCACCCAAATTGACCTGAAACTAAAAGCTAAGGCTCCGGAGGAAAGAATTATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAACGTACAAGGTTGGCCCAATGGCAAACACTTTCGTGCTGGCGATACTCTCAAGTTCAATTACGACCGGACAATTCATAACGTGGTGGTGGTGAATCAAGGTGGGTACACGAGCTGCCTGACTCCGGCGGGAGCGAAAGTTTTCACCTCCGGTAGCGACCAGATAAAGCTGGCGAAGGGAATGAACTATTTCATCTGCAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCCGTGAATGCTCTCTAA

Coding sequence (CDS)

ATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAACGTACAAGGTTGGCCCAATGGCAAACACTTTCGTGCTGGCGATACTCTCAAGTTCAATTACGACCGGACAATTCATAACGTGGTGGTGGTGAATCAAGGTGGGTACACGAGCTGCCTGACTCCGGCGGGAGCGAAAGTTTTCACCTCCGGTAGCGACCAGATAAAGCTGGCGAAGGGAATGAACTATTTCATCTGCAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCCGTGAATGCTCTCTAA

Homology

[Close]

BLAST of CmoCh15G006420 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 7.7e-40
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 1


Query: 31  AVYTVGDAGGWTFNVQGWPNGKHFRAGDTLKFNYDRTIHNVVVVNQGGYTSCLTPAGAKV 90
           AVY VG +GGWTFN + WP GK FRAGD L FNY+  +HNVVVVNQGG+++C TPAGAKV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 91  FTSGSDQIKLAKGMNYFICNFPGHCESGMKIAVNAL 127
           +TSG DQIKL KG +YFICNFPGHC+SGMKIAVNAL
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96

[Close]

BLAST of CmoCh15G006420 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-38
Identity = 75/126 (59.52%), Postives = 93/126 (73.81%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGL-VMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 61
           GRGSA  SA  +  ++ + V++ Q + V+AA YTVGD+G WTFN  GWP GKHFRAGD L
Sbjct: 4   GRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVL 63

Query: 62  KFNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMK 121
            FNY+  +HNVV V+ G Y +C TP GAK +TSG D+I L+KG N+FICNFP HCES MK
Sbjct: 64  VFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMK 123

Query: 122 IAVNAL 127
           IAV A+
Sbjct: 124 IAVTAV 129

[Close]

BLAST of CmoCh15G006420 vs. Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.1e-33
Identity = 65/125 (52.00%), Postives = 82/125 (65.60%), Query Frame = 1


Query: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 60
           M +GS      +V  V+ + ++   E  E+ VYTVGD GGWTF   GWP GK FRAGD L
Sbjct: 1   MAQGSGSAERALVLGVVLVFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVL 60

Query: 61  KFNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMK 120
            F Y+  +HNVV V  GGY SC    G++VF SG D+I L++G NYFIC+ PGHC+ G+K
Sbjct: 61  VFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLK 120

Query: 121 IAVNA 126
           IAV A
Sbjct: 121 IAVTA 125

[Close]

BLAST of CmoCh15G006420 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 1


Query: 30  AAVYTVGDAGGWT----FNVQGWPNGKHFRAGDTLKFNYDRTIHNVVVVNQGGYTSCLTP 89
           A V+ VGD+ GWT    ++   W +   F  GD+L FNY+   HNV+ V+Q  + SC + 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 90  AGAKVFTSGSDQIKLAK-GMNYFICNFPGHCESGMKIAV 124
           + A  +TSG+D I L + G  YF+C  PGHC+ G K+ +
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99

[Close]

BLAST of CmoCh15G006420 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 4   GSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQG--WPNGKHFRAGDTLK 63
           GS V +AL       L+ ++ + +V AA + VGD  GWT N+    W  GK FR GDTL+
Sbjct: 2   GSTVAAAL-------LLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLE 61

Query: 64  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAK-GMNYFICNFPGHCESGMK 123
           F Y  + H+V VV++ GY +C +    + F  G  +I L   G  +F+C   GHC++GMK
Sbjct: 62  FVYGLS-HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMK 119

Query: 124 IAVNAL 127
           +AV  L
Sbjct: 122 LAVPVL 119

[Close]

BLAST of CmoCh15G006420 vs. TrEMBL
Match: A0A0A0KCU9_CUCSA (Basic blue protein OS=Cucumis sativus GN=Csa_6G344240 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 5.7e-50
Identity = 96/125 (76.80%), Postives = 109/125 (87.20%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLK 61
           GRGSA+  A+ VAAVIGLVMMSQLESVEAAVY VG +GGWTFN + WP GK FRAGD L+
Sbjct: 8   GRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDILR 67

Query: 62  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMKI 121
           FNY+  +HNVVVVNQGG+++C TPAGAKV+ SGSDQIKL KG +YFICNFPGHC+SGMKI
Sbjct: 68  FNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMKI 127

Query: 122 AVNAL 127
           AVNAL
Sbjct: 128 AVNAL 132

[Close]

BLAST of CmoCh15G006420 vs. TrEMBL
Match: A0A059BYZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04279 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-41
Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLV-MMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 61
           GRGSA   A   A  + L+ + +Q E   AA YTVG +GGWT NV  WP GK FRAGDTL
Sbjct: 4   GRGSASRVATAAAVAVALIYLFAQAEYARAATYTVGGSGGWTLNVASWPKGKRFRAGDTL 63

Query: 62  KFNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMK 121
            F YDRT+HNVV +N+GGY SC TP GAKV++SG+DQIKL KG NYFICNFPGHCES MK
Sbjct: 64  IFKYDRTLHNVVALNKGGYDSCRTPGGAKVYSSGNDQIKLVKGPNYFICNFPGHCESAMK 123

Query: 122 IAVNA 126
           IAVNA
Sbjct: 124 IAVNA 128

[Close]

BLAST of CmoCh15G006420 vs. TrEMBL
Match: W9SBG7_9ROSA (Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.3e-41
Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = 1


Query: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 60
           MG+G    SA+V AA++ L+++SQ E   AA YTVG AGGWTFNV GWP GK FRAGDTL
Sbjct: 1   MGQGRV--SAMVAAALLLLLVLSQTELARAATYTVGGAGGWTFNVAGWPKGKRFRAGDTL 60

Query: 61  KFNYDRTIHNVVVVNQGGYTSCLT-PAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGM 120
            FNY R  HNVV VN+ GY +C T P GAKV+TSG DQIKL KG N+FICNFPGHCESGM
Sbjct: 61  VFNYGRGAHNVVAVNKAGYQTCRTVPKGAKVYTSGKDQIKLVKGQNFFICNFPGHCESGM 120

Query: 121 KIAVNA 126
           KIAV A
Sbjct: 121 KIAVTA 124

[Close]

BLAST of CmoCh15G006420 vs. TrEMBL
Match: A0A151QTE1_CAJCA (Basic blue protein OS=Cajanus cajan GN=KK1_045553 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.1e-40
Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLK 61
           GRGSA    LVV  V  L ++  +E   AA+Y+VG +GGWTFN   WPNGK FRAGD L 
Sbjct: 4   GRGSASLPRLVVTVVSLLCVLVLVEHANAAIYSVGGSGGWTFNTNTWPNGKRFRAGDVLV 63

Query: 62  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMKI 121
           FNYD T HNVV V++ GY SC TP+GAKVF +G+DQIKLA+G NYFICN+PGHCESGMK+
Sbjct: 64  FNYDSTAHNVVAVDRNGYNSCKTPSGAKVFRTGNDQIKLARGQNYFICNYPGHCESGMKV 123

Query: 122 AVNA 126
           ++NA
Sbjct: 124 SINA 127

[Close]

BLAST of CmoCh15G006420 vs. TrEMBL
Match: A0A0B2QPU3_GLYSO (Basic blue protein OS=Glycine soja GN=glysoja_015742 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.1e-40
Identity = 82/125 (65.60%), Postives = 94/125 (75.20%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLK 61
           GRGSA  S  +V  V+ L+ +  LE   AA Y+VG  GGWTFN   WPNGK FRAGD L 
Sbjct: 4   GRGSA--SLPIVVTVVSLLCL--LERANAATYSVGGPGGWTFNTNAWPNGKRFRAGDVLI 63

Query: 62  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMKI 121
           FNYD T HNVV V++ GY SC TP GAKVF+SG DQIKLA+G NYFICN+PGHCESGMK+
Sbjct: 64  FNYDSTTHNVVAVDRSGYNSCKTPGGAKVFSSGKDQIKLARGQNYFICNYPGHCESGMKV 123

Query: 122 AVNAL 127
           A+NAL
Sbjct: 124 AINAL 124

[Close]

BLAST of CmoCh15G006420 vs. TAIR10
Match: AT2G02850.1 (AT2G02850.1 plantacyanin)

HSP 1 Score: 160.2 bits (404), Expect = 8.2e-40
Identity = 75/126 (59.52%), Postives = 93/126 (73.81%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGL-VMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 61
           GRGSA  SA  +  ++ + V++ Q + V+AA YTVGD+G WTFN  GWP GKHFRAGD L
Sbjct: 4   GRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVL 63

Query: 62  KFNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMK 121
            FNY+  +HNVV V+ G Y +C TP GAK +TSG D+I L+KG N+FICNFP HCES MK
Sbjct: 64  VFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMK 123

Query: 122 IAVNAL 127
           IAV A+
Sbjct: 124 IAVTAV 129

[Close]

BLAST of CmoCh15G006420 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-18
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 1


Query: 4   GSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQ--GWPNGKHFRAGDTLK 63
           GS   +AL++     L+++  + +V A  + VGD  GWT  V+   W + K FR GDTL+
Sbjct: 2   GSTAATALLL-----LLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLE 61

Query: 64  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAK-GMNYFICNFPGHCESGMK 123
           F Y  + H+V VVN+  Y  C T    + F+ G  +I L K G  +F+C  PGHC  GMK
Sbjct: 62  FKYGPS-HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMK 121

Query: 124 IAVNAL 127
           +AV  L
Sbjct: 122 LAVQVL 121

[Close]

BLAST of CmoCh15G006420 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-17
Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 4   GSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQG--WPNGKHFRAGDTLK 63
           GS V +AL       L+ ++ + +V AA + VGD  GWT N+    W  GK FR GDTL+
Sbjct: 2   GSTVAAAL-------LLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLE 61

Query: 64  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAK-GMNYFICNFPGHCESGMK 123
           F Y  + H+V VV++ GY +C +    + F  G  +I L   G  +F+C   GHC++GMK
Sbjct: 62  FVYGLS-HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMK 119

Query: 124 IAVNAL 127
           +AV  L
Sbjct: 122 LAVPVL 119

[Close]

BLAST of CmoCh15G006420 vs. TAIR10
Match: AT2G31050.1 (AT2G31050.1 Cupredoxin superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-16
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1


Query: 9   SALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTF---NVQGWPNGKHFRAGDTLKFNYD 68
           S L++ A+ G+       SV   V+ VGD+ GWT    N + W +   F+ GD+L F Y+
Sbjct: 12  SLLILVALFGI-------SVGGTVHKVGDSDGWTIMSVNYETWASTITFQVGDSLVFKYN 71

Query: 69  RTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAK-GMNYFICNFPGHCESGMKIAVN 127
           +  H+V  V    Y  C        + +GSD + L K G+ +FIC FPGHC+ G K+ ++
Sbjct: 72  KDFHDVTEVTHNDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIH 126

[Close]

BLAST of CmoCh15G006420 vs. TAIR10
Match: AT1G17800.1 (AT1G17800.1 early nodulin-like protein 22)

HSP 1 Score: 80.9 bits (198), Expect = 6.3e-16
Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAA----VYTVGDAGGW--TFNVQGWPNGKHFR 61
           G  S V   + +A V+ ++ +    +V  A     Y VG   GW     +  W  GK F 
Sbjct: 6   GHVSYVAVTVPIAIVMTVLCLFLANAVTYARRPTTYIVGGDDGWDPVVPMDTWARGKTFY 65

Query: 62  AGDTLKFNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNF-PGH 121
           AGD L+F YD    N++VVN+ GY +C    GA  ++SG D+I+L  G NYFI  + P  
Sbjct: 66  AGDILEFKYDYQRFNLIVVNRTGYETCEANVGAIEYSSGDDKIQLNYGYNYFIGTYTPED 125

Query: 122 CESGMKIAVNAL 127
           C +G+K+A+ AL
Sbjct: 126 CTTGLKMAIKAL 137

[Close]

BLAST of CmoCh15G006420 vs. NCBI nr
Match: gi|778714946|ref|XP_004144257.2| (PREDICTED: basic blue protein [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 8.2e-50
Identity = 96/125 (76.80%), Postives = 109/125 (87.20%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLK 61
           GRGSA+  A+ VAAVIGLVMMSQLESVEAAVY VG +GGWTFN + WP GK FRAGD L+
Sbjct: 8   GRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDILR 67

Query: 62  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMKI 121
           FNY+  +HNVVVVNQGG+++C TPAGAKV+ SGSDQIKL KG +YFICNFPGHC+SGMKI
Sbjct: 68  FNYNPLVHNVVVVNQGGFSTCNTPAGAKVYKSGSDQIKLPKGQSYFICNFPGHCQSGMKI 127

Query: 122 AVNAL 127
           AVNAL
Sbjct: 128 AVNAL 132

[Close]

BLAST of CmoCh15G006420 vs. NCBI nr
Match: gi|659082080|ref|XP_008441659.1| (PREDICTED: basic blue protein-like, partial [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 8.2e-50
Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLK 61
           GRGSA+G  + VAAVIGLVMMSQLESVEAAVY VG + GWTFNVQ WP G  FRAGD LK
Sbjct: 23  GRGSAIGRGVAVAAVIGLVMMSQLESVEAAVYDVGGSSGWTFNVQNWPKGIRFRAGDILK 82

Query: 62  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMKI 121
           FNYD +IHNVVVVN+ GY SC TP GAKV+ +GSDQIKL KG +YFICNFPGHCE+GMKI
Sbjct: 83  FNYDSSIHNVVVVNKAGYASCKTPGGAKVYNTGSDQIKLPKGQSYFICNFPGHCEAGMKI 142

Query: 122 AVNAL 127
           AVNAL
Sbjct: 143 AVNAL 147

[Close]

BLAST of CmoCh15G006420 vs. NCBI nr
Match: gi|470108545|ref|XP_004290576.1| (PREDICTED: basic blue protein [Fragaria vesca subsp. vesca])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 82/125 (65.60%), Postives = 100/125 (80.00%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLK 61
           GRGSA  + + V AV  L+ +  ++ V+AA YTVGD+GGW+FN   WPNGK FRAGD L 
Sbjct: 5   GRGSARFTVVQVVAV--LLCLMAVQYVDAATYTVGDSGGWSFNTGKWPNGKQFRAGDVLI 64

Query: 62  FNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMKI 121
           FNYD T+HNVV V +GGY+SC TP GAKV TSG+D++KLAKG NYFICNFPGHCESGMK+
Sbjct: 65  FNYDSTLHNVVAVGRGGYSSCTTPRGAKVLTSGNDRVKLAKGQNYFICNFPGHCESGMKV 124

Query: 122 AVNAL 127
           A+NA+
Sbjct: 125 AINAV 127

[Close]

BLAST of CmoCh15G006420 vs. NCBI nr
Match: gi|702382625|ref|XP_010063900.1| (PREDICTED: basic blue protein [Eucalyptus grandis])

HSP 1 Score: 175.6 bits (444), Expect = 5.3e-41
Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 1


Query: 2   GRGSAVGSALVVAAVIGLV-MMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 61
           GRGSA   A   A  + L+ + +Q E   AA YTVG +GGWT NV  WP GK FRAGDTL
Sbjct: 4   GRGSASRVATAAAVAVALIYLFAQAEYARAATYTVGGSGGWTLNVASWPKGKRFRAGDTL 63

Query: 62  KFNYDRTIHNVVVVNQGGYTSCLTPAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGMK 121
            F YDRT+HNVV +N+GGY SC TP GAKV++SG+DQIKL KG NYFICNFPGHCES MK
Sbjct: 64  IFKYDRTLHNVVALNKGGYDSCRTPGGAKVYSSGNDQIKLVKGPNYFICNFPGHCESAMK 123

Query: 122 IAVNA 126
           IAVNA
Sbjct: 124 IAVNA 128

[Close]

BLAST of CmoCh15G006420 vs. NCBI nr
Match: gi|703127617|ref|XP_010103882.1| (Basic blue protein [Morus notabilis])

HSP 1 Score: 174.9 bits (442), Expect = 9.1e-41
Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = 1


Query: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 60
           MG+G    SA+V AA++ L+++SQ E   AA YTVG AGGWTFNV GWP GK FRAGDTL
Sbjct: 1   MGQGRV--SAMVAAALLLLLVLSQTELARAATYTVGGAGGWTFNVAGWPKGKRFRAGDTL 60

Query: 61  KFNYDRTIHNVVVVNQGGYTSCLT-PAGAKVFTSGSDQIKLAKGMNYFICNFPGHCESGM 120
            FNY R  HNVV VN+ GY +C T P GAKV+TSG DQIKL KG N+FICNFPGHCESGM
Sbjct: 61  VFNYGRGAHNVVAVNKAGYQTCRTVPKGAKVYTSGKDQIKLVKGQNFFICNFPGHCESGM 120

Query: 121 KIAVNA 126
           KIAV A
Sbjct: 121 KIAVTA 124

The following BLAST results are available for this feature:

BLAST of CmoCh15G006420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BABL_CUCSA	7.7e-40	75.00	Basic blue protein OS=Cucumis sativus PE=1 SV=1	[more]
BABL_ARATH	1.5e-38	59.52	Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2	[more]
BABL_LILLO	3.1e-33	52.00	Chemocyanin OS=Lilium longiflorum PE=1 SV=1	[more]
MAVI_CUCPE	1.6e-16	40.40	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]
BCB3_ARATH	1.0e-15	39.68	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]

BLAST of CmoCh15G006420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU9_CUCSA	5.7e-50	76.80	Basic blue protein OS=Cucumis sativus GN=Csa_6G344240 PE=4 SV=1	[more]
A0A059BYZ9_EUCGR	3.7e-41	66.40	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04279 PE=4 SV=1	[more]
W9SBG7_9ROSA	6.3e-41	68.25	Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1	[more]
A0A151QTE1_CAJCA	3.1e-40	63.71	Basic blue protein OS=Cajanus cajan GN=KK1_045553 PE=4 SV=1	[more]
A0A0B2QPU3_GLYSO	3.1e-40	65.60	Basic blue protein OS=Glycine soja GN=glysoja_015742 PE=4 SV=1	[more]

BLAST of CmoCh15G006420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02850.1	8.2e-40	59.52	plantacyanin	[more]
AT3G60270.1	5.2e-18	39.68	Cupredoxin superfamily protein	[more]
AT3G60280.1	5.7e-17	39.68	uclacyanin 3	[more]
AT2G31050.1	2.8e-16	35.25	Cupredoxin superfamily protein	[more]
AT1G17800.1	6.3e-16	37.12	early nodulin-like protein 22	[more]

BLAST of CmoCh15G006420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714946\|ref\|XP_004144257.2\|	8.2e-50	76.80	PREDICTED: basic blue protein [Cucumis sativus]	[more]
gi\|659082080\|ref\|XP_008441659.1\|	8.2e-50	77.60	PREDICTED: basic blue protein-like, partial [Cucumis melo]	[more]
gi\|470108545\|ref\|XP_004290576.1\|	1.1e-41	65.60	PREDICTED: basic blue protein [Fragaria vesca subsp. vesca]	[more]
gi\|702382625\|ref\|XP_010063900.1\|	5.3e-41	66.40	PREDICTED: basic blue protein [Eucalyptus grandis]	[more]
gi\|703127617\|ref\|XP_010103882.1\|	9.1e-41	68.25	Basic blue protein [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G006420.1	CmoCh15G006420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 62..125 score: 7.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 41..119 score: 2.4
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 31..126 score: 36
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 29..125 score: 5.5
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 31..125 score: 2.01
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 1..126 score: 1.2
None	No IPR available	PANTHER	PTHR33021:SF9	BASIC BLUE PROTEIN	coord: 1..126 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G006420	Cucsa.077170	Cucumber (Gy14) v1	cgycmoB0127
CmoCh15G006420	Cla013872	Watermelon (97103) v1	cmowmB250
CmoCh15G006420	Csa6G344240	Cucumber (Chinese Long) v2	cmocuB299
CmoCh15G006420	MELO3C008424	Melon (DHL92) v3.5.1	cmomeB259
CmoCh15G006420	ClCG08G006340	Watermelon (Charleston Gray)	cmowcgB265
CmoCh15G006420	CSPI06G18200	Wild cucumber (PI 183967)	cmocpiB308
CmoCh15G006420	Lsi08G005120	Bottle gourd (USVL1VR-Ls)	cmolsiB282
CmoCh15G006420	Cp4.1LG13g04400	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G006420	MELO3C008424.2	Melon (DHL92) v3.6.1	cmomedB293
CmoCh15G006420	CsaV3_6G031100	Cucumber (Chinese Long) v3	cmocucB0361
CmoCh15G006420	Cla97C08G149130	Watermelon (97103) v2	cmowmbB302
CmoCh15G006420	Bhi04G001432	Wax gourd	cmowgoB0386
CmoCh15G006420	CsGy6G017680	Cucumber (Gy14) v2	cgybcmoB724
CmoCh15G006420	Carg01572	Silver-seed gourd	carcmoB1118

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G006420	Cucurbita moschata (Rifu)	cmocmoB009
CmoCh15G006420	Cucurbita moschata (Rifu)	cmocmoB262
CmoCh15G006420	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G006420	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G006420	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G006420	Cucurbita pepo (Zucchini)	cmocpeB299
CmoCh15G006420	Silver-seed gourd	carcmoB0092