Carg01572 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.CTATTTCCAAAATTGAATGAAATAAAGAAGGCAGGCGTGTGGAAGGAGGCCAAGGGGTTGCGCTCCGACGACAATCTGAGCCAGATTGGAATAAATTCGAAGCTCCTAAAGTCTAAAACTGTGGGCACCGCCGATCAGTGGAAGTAGTTGGATGAAATTAATACGGTAACACATTGCCTTGTACAGAGCTCACCAACTTTCCTAATTTTTGTGTACCCTATTCATTTGCTTATTTATAACCCCAAGTTAATTCTGGCCTTAGGGTCTTATAAAATCACCTCATTTGGCCTTCATAAACGCACCCAAATTGACCTGAAACTAAAAGCTAATAAGGCTCCGGAGGAAAGAATTATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAACGTACAAGATTGGCCCAATGGCAAACACTTCCGTGCTGGCGATACTCTCAGTAAGCTCCTCCACCATTTTTCTTTTTTTTTTTTTTTTTAATTTTTTTTTTCAAAAAATTAAAGGAAAACAGTGACGATTGTTGGGACGGAGTCTATATTGGTTAATTTAAACAGTATGAGGCCTTTTGGTGAATCCTAAAACAAACCCATGATGTGCTCAAGATTCCTGGTATGATATCAGAGTCATGCCCTTAACTGGGACAATATCATACCATTTTGGAGAGTCGGATTCCTAATATGGTATCAGAGTCATACCCTTAACTGGGACAATATCATACCATTGTGGAAAGTTGTGATTCCTAATATGGTATCAGTGATTCCTAATATGGTATCAGAATCATGCCCTTAACTGAAACAATATTATACCATTGTGAAGAATTCTGATTCCCAATATGGTATTAGAGTCATGCTCTTAATTGAAACAATATTATACCATTGTGGAGAATCCTGATTCCTAATATGGTATTAGAGTCATGCTCTTAACTTAGCATGTCAATAAAATCCTCAAATGTCGAATAAAAGAGTAGTAAAAAATAACAAGTGTTGAACAAAGGATATACTTTGTTCAAGGACTTCAGAGAGAAGAGCTGAGAGGCTGTTCGATGGCTATATAGGCCTTACGAGGAGAGGCTCTATACTATACTTTCATGAATGGGAGGATGGTTGAAGATTATTTGAAGGGAGTGAAAAGACATTGACTAATCTAATGAATGATCCCGAGTGAACAATATCATTCTATTGCAAAGAATCTTATCTGACAAAATATTTGTTTGCAGAGTTCAATTACGACCGGTCAATTCATAACGTGGTGGTGGTGAACCAAGGTGGGTACAAGAGCTGCCTGACTCCGGCGGGAGCGAAAGTTTTCACCTCCGGTAGCGACCAGATAAAGCTGGCGAAGGGAATGAACTATTTCATCTGCAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCCGTGAATGCTCTCTAAATCTGTACCCCTTTTTAAAATCTTTATTTACCGCTGTTAAAATAAAATAACCGGGAGTGTTTGCTTTGTAGTTCAAATGTCATTTCCTTGTCGGGAGCTTATATAGTTTATGCAATCATATCAATGCTTTTCTTTATTTATTTCTTTGTTTTTGTCGGTTATAGTAATGGAAAATGTAATAATTTATTTTCCAATATTT CTATTTCCAAAATTGAATGAAATAAAGAAGGCAGGCGTGTGGAAGGAGGCCAAGGGGTTGCGCTCCGACGACAATCTGAGCCAGATTGGAATAAATTCGAAGCTCCTAAAGTCTAAAACTGCTCCGGAGGAAAGAATTATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAACGTACAAGATTGGCCCAATGGCAAACACTTCCGTGCTGGCGATACTCTCATAATGGAAAATGTAATAATTTATTTTCCAATATTT CTATTTCCAAAATTGAATGAAATAAAGAAGGCAGGCGTGTGGAAGGAGGCCAAGGGGTTGCGCTCCGACGACAATCTGAGCCAGATTGGAATAAATTCGAAGCTCCTAAAGTCTAAAACTGCTCCGGAGGAAAGAATTATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAACGTACAAGATTGGCCCAATGGCAAACACTTCCGTGCTGGCGATACTCTCATAATGGAAAATGTAATAATTTATTTTCCAATATTT LFPKLNEIKKAGVWKEAKGLRSDDNLSQIGINSKLLKSKTAPEERIMGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQDWPNGKHFRAGDTLIMENVIIYFPIF
BLAST of Carg01572 vs. NCBI nr
Match: XP_022938793.1 (basic blue protein-like [Cucurbita moschata]) HSP 1 Score: 119.4 bits (298), Expect = 8.3e-24 Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of Carg01572 vs. NCBI nr
Match: XP_023550997.1 (basic blue protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 119.4 bits (298), Expect = 8.3e-24 Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of Carg01572 vs. NCBI nr
Match: XP_022993936.1 (basic blue protein-like [Cucurbita maxima]) HSP 1 Score: 112.8 bits (281), Expect = 7.7e-22 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of Carg01572 vs. NCBI nr
Match: XP_022141378.1 (basic blue protein-like [Momordica charantia]) HSP 1 Score: 96.3 bits (238), Expect = 7.5e-17 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Carg01572 vs. NCBI nr
Match: XP_004144257.2 (PREDICTED: basic blue protein [Cucumis sativus] >KGN47495.1 Basic blue protein [Cucumis sativus]) HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16 Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Carg01572 vs. TAIR10
Match: AT2G02850.1 (plantacyanin) HSP 1 Score: 70.1 bits (170), Expect = 1.0e-12 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Carg01572 vs. TAIR10
Match: AT5G26330.1 (Cupredoxin superfamily protein) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Carg01572 vs. TAIR10
Match: AT3G60280.1 (uclacyanin 3) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 25/59 (42.37%), Postives = 33/59 (55.93%), Query Frame = 0
BLAST of Carg01572 vs. Swiss-Prot
Match: sp|Q8LG89|BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 1.9e-11 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Carg01572 vs. Swiss-Prot
Match: sp|P60496|BABL_LILLO (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of Carg01572 vs. Swiss-Prot
Match: sp|P00303|BABL_CUCSA (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07 Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Carg01572 vs. TrEMBL
Match: tr|A0A0A0KCU9|A0A0A0KCU9_CUCSA (Basic blue protein OS=Cucumis sativus OX=3659 GN=Csa_6G344240 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.9e-16 Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Carg01572 vs. TrEMBL
Match: tr|A0A1S3B4N7|A0A1S3B4N7_CUCME (basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103485741 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.1e-16 Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of Carg01572 vs. TrEMBL
Match: tr|A0A2C9U1K5|A0A2C9U1K5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G085600 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.9e-11 Identity = 41/72 (56.94%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Carg01572 vs. TrEMBL
Match: tr|W9SBG7|W9SBG7_9ROSA (Basic blue protein OS=Morus notabilis OX=981085 GN=L484_024185 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.0e-11 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of Carg01572 vs. TrEMBL
Match: tr|A0A1R3GR07|A0A1R3GR07_9ROSI (Plastocyanin-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_33821 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-10 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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