Csa6G290840 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G290840
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	MaoC-like dehydratase; contains IPR002539 (MaoC-like domain)
Location	Chr6 : 14039128 .. 14040853 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTTTGGTCTTTTTTATGAAATGTTTAAATTACTTGTTTGATGTGGGTGATGTAAAGGGAATGATGCATCCCATAATACACTTAAGTATTACCTTTTTAAGTGCTTACATATTTTTCTATGTCTTGATCTTCTCTACAGCTTCTAATGGTTGCCTCCTTTGTTTTCTTGATACAGCTTTGTAGCAAATACTTAAAAGTCCTTTATTGACAAGTATGCTAAGTAAAGGTTTATTCTCAACATATATTTCTTCTTCTTTGAAATGCTTCTCTTCATCAACTTCTAGTGTGCTCAAAGTTGGAGATATCTTGAGCTATAACAGAATATTCACTAGTGAAGATGTTTTGGAATACTCCAAAGTGAGTCATGACTCTAATCCTCTGCATTTCGATTCCAAATTAGCTCAACGTGCTGGATTCAACGGTTGTCTTGTTCACGGTTTGCTTGTCGCTTCGATGTTCCCTCATATCATTTCTTCTCATTATGTAAGTCTACCCCGTTTGCGTTTCTAACACTTATAGAACTTTGGGGGAACTGAGAAATGGCACCTGAAACGTTCTTACAACTGATTTAATGCTTATCTTTTAATGTATGGTGATGGTCTAATCTTTGAAGATGCTCTGATTTATAATGTTGAGGATGATTGTAGCCTGGAGCCATCTATGTGTCGCAAAGTTTAAACTTTAAGTTGCCGGTTTACGTCGGAGAGAAGATTGTTGGTCAGGTAGAAGCAATCGAGTTGAGAGAAAATAAGAAGAGATACCTGTAAGCTTGTTCTTGGGGGGCAAATCTCTACCTTCTCAAATTCAAATTTCAAGTTATCATTTCATTGAGTTTGGGTACTGCCAAATGTGTTTCAGGGCTAAATTCAAAACAAAGTGCTTGAGGAATGGAGACGAGCTTGTTCTCGAGGGCGAGGCAAGGGCCATCTTACCCGTTGATTTTCATTCCACAAACGAGTAGAAGATGAGCTTGTACTCAGGTCTCGAAGGGCTTTCAGATGATTTCCTAGCCTCCACTTTATGTTGCTTCATCTCTTATTGATGGGATATGAACAACATCTCTATTGTAGGCCATCGTTCTGGGTCTGTTTCTTTTTCAATAAATTTGCCATGAGCTCCTTTCCATCTTCAAAATGATCAATTATCATCAACAGAGACTAACAAAATGAAACAGATTTTCTATCACAAACATAAATATCACTTGTATTCACATAAACTAGAAAGTATAATGAATTGAATTTTTATTCAATTGTCTTTGTGTTCAATGAGACATCCAAGCAGCGTAGAAGTGTAATCGAAGTTTTAAGAATCAGAAGATTCTGATATGGTAATATTTCTATTGCTTGTAATATAACTTGCCCCTTTGATACCATGTTCACTAGACCCTTAACTACCCTTAAACTCATTATTTTCCAAAAAAAAATATATGAAATGGGGCAAAAAAGGGGGGGGAAATGAAAAAGAAAACTATCTTTTCTCCTCCGTACCTGGTTGAGGAGCAACAGAACAATCGTGTGGTATGTACATTATCTATAGTGAGCTACAACACCTATCTTTTACTCTGTGGCAGAATCATTGATGGTTTGAACTTTGAGATCTTCTGTGTCACGATCCAAGGAAGATTGATCCACGGAACGGGAAATGTTTAGTTGACCTTCTGGGGATCCGAAGAGGGTAGTAAATATCTGTCTATGGCATTCATCACAGAAGTAGATATATGTATAA

mRNA sequence

ATGCTAAGTAAAGGTTTATTCTCAACATATATTTCTTCTTCTTTGAAATGCTTCTCTTCATCAACTTCTAGTGTGCTCAAAGTTGGAGATATCTTGAGCTATAACAGAATATTCACTAGTGAAGATGTTTTGGAATACTCCAAAGTGAGTCATGACTCTAATCCTCTGCATTTCGATTCCAAATTAGCTCAACGTGCTGGATTCAACGGTTGTCTTGTTCACGGTTTGCTTGTCGCTTCGATGTTCCCTCATATCATTTCTTCTCATTATCCTGGAGCCATCTATGTGTCGCAAAGTTTAAACTTTAAGTTGCCGGTTTACGTCGGAGAGAAGATTGTTGGTCAGGTAGAAGCAATCGAGTTGAGAGAAAATAAGAAGAGATACCTGGCTAAATTCAAAACAAAGTGCTTGAGGAATGGAGACGAGCTTGTTCTCGAGGGCGAGGCAAGGGCCATCTTACCCGTTGATTTTCATTCCACAAACGAGTAG

Coding sequence (CDS)

ATGCTAAGTAAAGGTTTATTCTCAACATATATTTCTTCTTCTTTGAAATGCTTCTCTTCATCAACTTCTAGTGTGCTCAAAGTTGGAGATATCTTGAGCTATAACAGAATATTCACTAGTGAAGATGTTTTGGAATACTCCAAAGTGAGTCATGACTCTAATCCTCTGCATTTCGATTCCAAATTAGCTCAACGTGCTGGATTCAACGGTTGTCTTGTTCACGGTTTGCTTGTCGCTTCGATGTTCCCTCATATCATTTCTTCTCATTATCCTGGAGCCATCTATGTGTCGCAAAGTTTAAACTTTAAGTTGCCGGTTTACGTCGGAGAGAAGATTGTTGGTCAGGTAGAAGCAATCGAGTTGAGAGAAAATAAGAAGAGATACCTGGCTAAATTCAAAACAAAGTGCTTGAGGAATGGAGACGAGCTTGTTCTCGAGGGCGAGGCAAGGGCCATCTTACCCGTTGATTTTCATTCCACAAACGAGTAG

Protein sequence

MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE*

Homology

[Close]

BLAST of Csa6G290840 vs. Swiss-Prot
Match: PHAJ_AERCA ((R)-specific enoyl-CoA hydratase OS=Aeromonas caviae GN=phaJ PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-18
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 1


Query: 26  LKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLVHGLLVASMFPHI 85
           L+VG     ++ F + +V  ++ +S D NPLH D   A    F   +VHG+L+AS+F  +
Sbjct: 6   LEVGQKARLSKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASLFSGL 65

Query: 86  ISSHYP--GAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFKTKCLRNGDEL 145
           +    P  G+IY+ QSL+FKLPV+VG+++  +VE   LRE+K   +A   T+    G  L
Sbjct: 66  LGQQLPGKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDKP--IATLTTRIFTQGGAL 125

Query: 146 VLEGEARAILP 155
            + GEA   LP
Sbjct: 126 AVTGEAVVKLP 134

[Close]

BLAST of Csa6G290840 vs. Swiss-Prot
Match: CROR_METEA (3-hydroxybutyryl-CoA dehydratase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=croR PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 45/131 (34.35%), Postives = 72/131 (54.96%), Query Frame = 1


Query: 26  LKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLVHGLLVASMFPHI 85
           L+VG      +  +S DV+ +++++ D NP+H     A R  F   + HGL  A +   +
Sbjct: 13  LEVGLTEILKKEISSSDVVGFAEITGDRNPIHLSEHFAARTPFGTRIAHGLYTAGLISAV 72

Query: 86  ISSHY--PGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFKTKCLRNGDEL 145
           + +    PGA+Y+SQ+LNF+ PV +G+ +  +VE  EL   ++R  A+    C   GDE+
Sbjct: 73  LGTRLPGPGAVYISQTLNFRAPVRIGDIVEVKVEVAELIPERRR--ARLACTC-SVGDEV 132

Query: 146 VLEGEARAILP 155
           VL+GEA   +P
Sbjct: 133 VLDGEALVKVP 140

[Close]

BLAST of Csa6G290840 vs. Swiss-Prot
Match: HTD2_HUMAN (Hydroxyacyl-thioester dehydratase type 2, mitochondrial OS=Homo sapiens GN=RPP14 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.5e-14
Identity = 40/132 (30.30%), Postives = 70/132 (53.03%), Query Frame = 1


Query: 26  LKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLVHGLLVASMFPHI 85
           +KVGD     R FT  DV  +S+++ D NPLH +   A+   F   +VHG+L+  +   +
Sbjct: 36  IKVGDRAELRRAFTQTDVATFSELTGDVNPLHLNEDFAKHTKFGNTIVHGVLINGLISAL 95

Query: 86  ISSHY--PGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFKTKC-LRNGDE 145
           + +    PG +++SQ ++F  P+Y+GE ++   E  +L    KR++A     C +    +
Sbjct: 96  LGTKMPGPGCVFLSQEISFPAPLYIGEVVLASAEVKKL----KRFIAIIAVSCSVIESKK 155

Query: 146 LVLEGEARAILP 155
            V+EG  + ++P
Sbjct: 156 TVMEGWVKVMVP 163

[Close]

BLAST of Csa6G290840 vs. Swiss-Prot
Match: PHAJ_RHORT ((R)-specific enoyl-CoA hydratase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=phaJ PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.9e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 1


Query: 26  LKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLVHGLLVASMFPHI 85
           +K G   S  +  +  D+  ++ +S D+NP H +   AQ   F   + HG+L A     +
Sbjct: 14  IKEGQSASLAKTISESDIYLFAGLSMDTNPAHVNEDYAQTTVFKTRIAHGMLSAGFISAV 73

Query: 86  ISSHY--PGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFKTKCLRNGDEL 145
           + +    PGAIYV+QSL FK PV +G+ +   V    L   KK     F+T C   G ++
Sbjct: 74  LGTRLPGPGAIYVNQSLKFKAPVRIGDTVTATVTVTGLVPEKK--FVTFRTTCTVAG-KV 133

Query: 146 VLEGEARAILP 155
           V+EGEA  ++P
Sbjct: 134 VIEGEATVMVP 141

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BLAST of Csa6G290840 vs. TrEMBL
Match: A0A0A0KCN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G290840 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.2e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


Query: 1   MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS 60
           MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS
Sbjct: 1   MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS 60

Query: 61  KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE 120
           KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE
Sbjct: 61  KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE 120

Query: 121 LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE 163
           LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE
Sbjct: 121 LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE 162

[Close]

BLAST of Csa6G290840 vs. TrEMBL
Match: I1M7A1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G041000 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.4e-50
Identity = 96/143 (67.13%), Postives = 120/143 (83.92%), Query Frame = 1


Query: 12  SSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGC 71
           S SL+CF+S T +VLK GD+L   R++T EDVL+YSKVS DSNPLH DS  A+  GF G 
Sbjct: 13  SLSLRCFTSGTPNVLKPGDVLRKARVYTDEDVLQYSKVSCDSNPLHTDSAAAKDVGFEGP 72

Query: 72  LVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAK 131
           LVHG+LVAS+FPHIISSH+PGA+YVSQ+LNFK PVY+G++I+G+V+A  LRENK RYLAK
Sbjct: 73  LVHGMLVASLFPHIISSHFPGAVYVSQNLNFKFPVYIGDQIIGEVQATNLRENKNRYLAK 132

Query: 132 FKTKCLRNGDELVLEGEARAILP 155
           FKT+C +NGD LV++GEA A+LP
Sbjct: 133 FKTRCFKNGDLLVIDGEAVALLP 155

[Close]

BLAST of Csa6G290840 vs. TrEMBL
Match: A0A0B2R270_GLYSO ((R)-specific enoyl-CoA hydratase OS=Glycine soja GN=glysoja_038244 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.4e-50
Identity = 96/143 (67.13%), Postives = 120/143 (83.92%), Query Frame = 1


Query: 12  SSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGC 71
           S SL+CF+S T +VLK GD+L   R++T EDVL+YSKVS DSNPLH DS  A+  GF G 
Sbjct: 13  SLSLRCFTSGTPNVLKPGDVLRKARVYTDEDVLQYSKVSCDSNPLHTDSAAAKDVGFEGP 72

Query: 72  LVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAK 131
           LVHG+LVAS+FPHIISSH+PGA+YVSQ+LNFK PVY+G++I+G+V+A  LRENK RYLAK
Sbjct: 73  LVHGMLVASLFPHIISSHFPGAVYVSQNLNFKFPVYIGDQIIGEVQATNLRENKNRYLAK 132

Query: 132 FKTKCLRNGDELVLEGEARAILP 155
           FKT+C +NGD LV++GEA A+LP
Sbjct: 133 FKTRCFKNGDLLVIDGEAVALLP 155

[Close]

BLAST of Csa6G290840 vs. TrEMBL
Match: G7K300_MEDTR ((R)-specific enoyl-CoA hydratase OS=Medicago truncatula GN=MTR_5g087960 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.4e-50
Identity = 98/141 (69.50%), Postives = 119/141 (84.40%), Query Frame = 1


Query: 14  SLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLV 73
           SL+CFSS+T  VLK GD+L   R+FT EDVL+YSKVSHD NPLH DS  A+  GF+G LV
Sbjct: 16  SLRCFSSTTH-VLKPGDVLKKTRVFTEEDVLQYSKVSHDYNPLHADSAAARSVGFDGPLV 75

Query: 74  HGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFK 133
           HG+LVAS+FPHIISSH+P A+YVSQ+LNFKLPVY+G++IVG+V+A  LRENK RY AKFK
Sbjct: 76  HGMLVASLFPHIISSHFPAAVYVSQTLNFKLPVYIGDQIVGEVQATNLRENKNRYFAKFK 135

Query: 134 TKCLRNGDELVLEGEARAILP 155
           T+C +NGD LV+EGEA A+LP
Sbjct: 136 TRCFKNGDILVVEGEALALLP 155

[Close]

BLAST of Csa6G290840 vs. TrEMBL
Match: A0A151U1P7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_005832 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-49
Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = 1


Query: 14  SLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLV 73
           SL+CF+S T  VLK GD+L   R+FT EDVL+YSKVS DSNPLH D+  A+  GF G LV
Sbjct: 15  SLRCFTSVTPHVLKPGDVLRKARVFTEEDVLQYSKVSCDSNPLHADAVAARNVGFEGPLV 74

Query: 74  HGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFK 133
           HG+LVAS+FPHIISSH+PGA+YVSQSLNFK PVY+G+KI+G+V+A  LRENK R+LAKFK
Sbjct: 75  HGMLVASLFPHIISSHFPGAVYVSQSLNFKFPVYIGDKIIGEVQATNLRENKNRHLAKFK 134

Query: 134 TKCLRNGDELVLEGEARAILP 155
           TKC +NG+ LV++GEA A+LP
Sbjct: 135 TKCFKNGELLVIDGEAVALLP 155

[Close]

BLAST of Csa6G290840 vs. TAIR10
Match: AT5G60335.1 (AT5G60335.1 Thioesterase superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 89/156 (57.05%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 1   MLSKGLFSTYISSSLKCFSSSTS-SVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFD 60
           ML+K +F   +   L+ FSS  S ++LKVGD+L   R+F+SED+  Y++VSHD NPLHFD
Sbjct: 1   MLAKTVFPRGLLV-LRSFSSVASKTLLKVGDVLRETRVFSSEDIKAYAEVSHDWNPLHFD 60

Query: 61  SKLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAI 120
            + A++AGF   LVHG+LV+SMFP IIS+H+PGA+YVSQSL+F+ PVY+G++I+G V+AI
Sbjct: 61  PESARKAGFENRLVHGMLVSSMFPRIISAHFPGAVYVSQSLHFRSPVYIGDEILGLVQAI 120

Query: 121 ELRENKKRYLAKFKTKCLRNGDEL-VLEGEARAILP 155
            LRE K +Y+ KF TKC +N +EL V++GEA AILP
Sbjct: 121 ALRETKNKYIVKFSTKCFKNHNELVVIDGEATAILP 155

[Close]

BLAST of Csa6G290840 vs. NCBI nr
Match: gi|449463667|ref|XP_004149553.1| (PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 4.6e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


Query: 1   MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS 60
           MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS
Sbjct: 1   MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS 60

Query: 61  KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE 120
           KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE
Sbjct: 61  KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE 120

Query: 121 LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE 163
           LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE
Sbjct: 121 LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE 162

[Close]

BLAST of Csa6G290840 vs. NCBI nr
Match: gi|659127833|ref|XP_008463911.1| (PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 8.9e-81
Identity = 154/162 (95.06%), Postives = 159/162 (98.15%), Query Frame = 1


Query: 1   MLSKGLFSTYISSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDS 60
           MLS+GLFST+ISSSLKCFSSSTS+VLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFD 
Sbjct: 45  MLSRGLFSTHISSSLKCFSSSTSNVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDP 104

Query: 61  KLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE 120
           +LA+RAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE
Sbjct: 105 ELARRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIE 164

Query: 121 LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPVDFHSTNE 163
           LRENKKRYLAKFKTKCLRNGDELVLEGEARAILP  FHSTNE
Sbjct: 165 LRENKKRYLAKFKTKCLRNGDELVLEGEARAILPAYFHSTNE 206

[Close]

BLAST of Csa6G290840 vs. NCBI nr
Match: gi|828296228|ref|XP_004491188.2| (PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Cicer arietinum])

HSP 1 Score: 212.2 bits (539), Expect = 6.6e-52
Identity = 103/155 (66.45%), Postives = 126/155 (81.29%), Query Frame = 1


Query: 1   MLSKGLFSTYISS-SLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFD 60
           ML + L S+ +   SL+CFSS+T  VLK GDIL   R+FT EDVL+YSKVSHDSNPLH D
Sbjct: 1   MLFRSLHSSKLQYLSLRCFSSATPHVLKPGDILKKTRVFTEEDVLQYSKVSHDSNPLHID 60

Query: 61  SKLAQRAGFNGCLVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAI 120
           S  A+  GF G LVHG+LVAS+FPHIISSH+P A+YVSQ+LNFKLPVY+G++IV +V+A 
Sbjct: 61  SATARNVGFEGPLVHGMLVASLFPHIISSHFPAAVYVSQTLNFKLPVYIGDQIVAEVQAT 120

Query: 121 ELRENKKRYLAKFKTKCLRNGDELVLEGEARAILP 155
            LRENK RYLAKFKT+C +NG+ LV+EGEA A+LP
Sbjct: 121 NLRENKNRYLAKFKTRCFKNGEILVIEGEAMALLP 155

[Close]

BLAST of Csa6G290840 vs. NCBI nr
Match: gi|357493635|ref|XP_003617106.1| ((R)-specific enoyl-CoA hydratase [Medicago truncatula])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 98/141 (69.50%), Postives = 119/141 (84.40%), Query Frame = 1


Query: 14  SLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGCLV 73
           SL+CFSS+T  VLK GD+L   R+FT EDVL+YSKVSHD NPLH DS  A+  GF+G LV
Sbjct: 16  SLRCFSSTTH-VLKPGDVLKKTRVFTEEDVLQYSKVSHDYNPLHADSAAARSVGFDGPLV 75

Query: 74  HGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAKFK 133
           HG+LVAS+FPHIISSH+P A+YVSQ+LNFKLPVY+G++IVG+V+A  LRENK RY AKFK
Sbjct: 76  HGMLVASLFPHIISSHFPAAVYVSQTLNFKLPVYIGDQIVGEVQATNLRENKNRYFAKFK 135

Query: 134 TKCLRNGDELVLEGEARAILP 155
           T+C +NGD LV+EGEA A+LP
Sbjct: 136 TRCFKNGDILVVEGEALALLP 155

[Close]

BLAST of Csa6G290840 vs. NCBI nr
Match: gi|571507099|ref|XP_006595803.1| (PREDICTED: (R)-specific enoyl-CoA hydratase-like [Glycine max])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 96/143 (67.13%), Postives = 120/143 (83.92%), Query Frame = 1


Query: 12  SSSLKCFSSSTSSVLKVGDILSYNRIFTSEDVLEYSKVSHDSNPLHFDSKLAQRAGFNGC 71
           S SL+CF+S T +VLK GD+L   R++T EDVL+YSKVS DSNPLH DS  A+  GF G 
Sbjct: 13  SLSLRCFTSGTPNVLKPGDVLRKARVYTDEDVLQYSKVSCDSNPLHTDSAAAKDVGFEGP 72

Query: 72  LVHGLLVASMFPHIISSHYPGAIYVSQSLNFKLPVYVGEKIVGQVEAIELRENKKRYLAK 131
           LVHG+LVAS+FPHIISSH+PGA+YVSQ+LNFK PVY+G++I+G+V+A  LRENK RYLAK
Sbjct: 73  LVHGMLVASLFPHIISSHFPGAVYVSQNLNFKFPVYIGDQIIGEVQATNLRENKNRYLAK 132

Query: 132 FKTKCLRNGDELVLEGEARAILP 155
           FKT+C +NGD LV++GEA A+LP
Sbjct: 133 FKTRCFKNGDLLVIDGEAVALLP 155

The following BLAST results are available for this feature:

BLAST of Csa6G290840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHAJ_AERCA	4.8e-18	38.17	(R)-specific enoyl-CoA hydratase OS=Aeromonas caviae GN=phaJ PE=1 SV=1	[more]
CROR_METEA	2.5e-14	34.35	3-hydroxybutyryl-CoA dehydratase OS=Methylobacterium extorquens (strain ATCC 147...	[more]
HTD2_HUMAN	5.5e-14	30.30	Hydroxyacyl-thioester dehydratase type 2, mitochondrial OS=Homo sapiens GN=RPP14...	[more]
PHAJ_RHORT	7.9e-13	33.59	(R)-specific enoyl-CoA hydratase OS=Rhodospirillum rubrum (strain ATCC 11170 / A...	[more]

BLAST of Csa6G290840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCN3_CUCSA	3.2e-85	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G290840 PE=4 SV=1	[more]
I1M7A1_SOYBN	7.4e-50	67.13	Uncharacterized protein OS=Glycine max GN=GLYMA_14G041000 PE=4 SV=1	[more]
A0A0B2R270_GLYSO	7.4e-50	67.13	(R)-specific enoyl-CoA hydratase OS=Glycine soja GN=glysoja_038244 PE=4 SV=1	[more]
G7K300_MEDTR	7.4e-50	69.50	(R)-specific enoyl-CoA hydratase OS=Medicago truncatula GN=MTR_5g087960 PE=4 SV=...	[more]
A0A151U1P7_CAJCA	2.2e-49	68.09	Uncharacterized protein OS=Cajanus cajan GN=KK1_005832 PE=4 SV=1	[more]

BLAST of Csa6G290840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60335.1	1.9e-44	57.05	Thioesterase superfamily protein	[more]

BLAST of Csa6G290840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463667\|ref\|XP_004149553.1\|	4.6e-85	100.00	PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Cucumis sati...	[more]
gi\|659127833\|ref\|XP_008463911.1\|	8.9e-81	95.06	PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Cucumis melo...	[more]
gi\|828296228\|ref\|XP_004491188.2\|	6.6e-52	66.45	PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Cicer arieti...	[more]
gi\|357493635\|ref\|XP_003617106.1\|	1.1e-49	69.50	(R)-specific enoyl-CoA hydratase [Medicago truncatula]	[more]
gi\|571507099\|ref\|XP_006595803.1\|	1.1e-49	67.13	PREDICTED: (R)-specific enoyl-CoA hydratase-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002539	MaoC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:0046939	nucleotide phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0008150	biological_process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004017	adenylate kinase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0019171	3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU094348	cucumber EST collection version 3.0	transcribed_cluster
CU116904	cucumber EST collection version 3.0	transcribed_cluster
CU143757	cucumber EST collection version 3.0	transcribed_cluster
CU146054	cucumber EST collection version 3.0	transcribed_cluster
CU162943	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G290840.1	Csa6G290840.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU146054	CU146054	transcribed_cluster
CU094348	CU094348	transcribed_cluster
CU116904	CU116904	transcribed_cluster
CU162943	CU162943	transcribed_cluster
CU143757	CU143757	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002539	MaoC-like domain	PFAM	PF01575	MaoC_dehydratas	coord: 37..125 score: 2.4
None	No IPR available	PANTHER	PTHR13078	FAMILY NOT NAMED	coord: 25..154 score: 9.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G290840	Cla000549	Watermelon (97103) v1	cuwmB515
Csa6G290840	MELO3C025746	Melon (DHL92) v3.5.1	cumeB428
Csa6G290840	ClCG02G020940	Watermelon (Charleston Gray)	cuwcgB440
Csa6G290840	Lsi10G012910	Bottle gourd (USVL1VR-Ls)	culsiB417
Csa6G290840	MELO3C025746.2	Melon (DHL92) v3.6.1	cumedB408
Csa6G290840	Cla97C02G046970	Watermelon (97103) v2	cuwmbB430
Csa6G290840	Bhi10G000476	Wax gourd	cuwgoB598
Csa6G290840	CSPI06G16250	Wild cucumber (PI 183967)	cpicuB313
Csa6G290840	Cucsa.052760	Cucumber (Gy14) v1	cgycuB036
Csa6G290840	CmaCh20G004700	Cucurbita maxima (Rimu)	cmacuB557
Csa6G290840	CmoCh20G005050	Cucurbita moschata (Rifu)	cmocuB547
Csa6G290840	CsGy6G015770	Cucumber (Gy14) v2	cgybcuB281
Csa6G290840	Carg20235	Silver-seed gourd	carcuB0336
Csa6G290840	Carg03256	Silver-seed gourd	carcuB0372

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G290840	Cucurbita pepo (Zucchini)	cpecuB294
Csa6G290840	Cucurbita pepo (Zucchini)	cpecuB755
Csa6G290840	Bottle gourd (USVL1VR-Ls)	culsiB408
Csa6G290840	Bottle gourd (USVL1VR-Ls)	culsiB440
Csa6G290840	Bottle gourd (USVL1VR-Ls)	culsiB443
Csa6G290840	Cucumber (Gy14) v2	cgybcuB046
Csa6G290840	Melon (DHL92) v3.6.1	cumedB463
Csa6G290840	Watermelon (97103) v2	cuwmbB417
Csa6G290840	Watermelon (97103) v2	cuwmbB454
Csa6G290840	Wax gourd	cuwgoB528
Csa6G290840	Wax gourd	cuwgoB609
Csa6G290840	Cucumber (Chinese Long) v2	cucuB041
Csa6G290840	Cucumber (Chinese Long) v2	cucuB124
Csa6G290840	Cucumber (Chinese Long) v2	cucuB161
Csa6G290840	Cucurbita maxima (Rimu)	cmacuB230
Csa6G290840	Cucurbita maxima (Rimu)	cmacuB619
Csa6G290840	Cucurbita moschata (Rifu)	cmocuB216
Csa6G290840	Cucurbita moschata (Rifu)	cmocuB610
Csa6G290840	Melon (DHL92) v3.5.1	cumeB483
Csa6G290840	Watermelon (Charleston Gray)	cuwcgB463
Csa6G290840	Watermelon (97103) v1	cuwmB481
Csa6G290840	Watermelon (97103) v1	cuwmB451