Csa6G194670 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCAAAGAACAAAAGAAAATGTCGGGCGTTTGGGTGTTCAGAAACGGCGTCGTTCGGTTAGTGGAAAACGGGGGAGGCAGTGCGGCGGAGGGCGGGGGTCAGCAGTCGCAACTCCGGCGGAAAGCGCTGGTGTTCAGTCAGACGGCGGAGGTGATGACGTCGTACGCAGCGTTGGAAAAGAAGTTGGTGCCGTTGGGATGGGAGCGGTATTACGATGATCCAAATCTGTTGCAATTTCATAAGAGATCAACGGTCCACCTTATCTCTCTCCCCAAAGATTTTGCTAAGTTCAAATCCATGCATATGTACGACATCGTCGTTAAGAATCGAAACCATTTCGAAGTTATTGACACTTAATTTTCAACTCATTTTTATTTAAATAAATATAAATAAAGTTCTAATTTTA ATGTCGGGCGTTTGGGTGTTCAGAAACGGCGTCGTTCGGTTAGTGGAAAACGGGGGAGGCAGTGCGGCGGAGGGCGGGGGTCAGCAGTCGCAACTCCGGCGGAAAGCGCTGGTGTTCAGTCAGACGGCGGAGGTGATGACGTCGTACGCAGCGTTGGAAAAGAAGTTGGTGCCGTTGGGATGGGAGCGGTATTACGATGATCCAAATCTGTTGCAATTTCATAAGAGATCAACGGTCCACCTTATCTCTCTCCCCAAAGATTTTGCTAAGTTCAAATCCATGCATATGTACGACATCGTCGTTAAGAATCGAAACCATTTCGAAGTTATTGACACTTAA ATGTCGGGCGTTTGGGTGTTCAGAAACGGCGTCGTTCGGTTAGTGGAAAACGGGGGAGGCAGTGCGGCGGAGGGCGGGGGTCAGCAGTCGCAACTCCGGCGGAAAGCGCTGGTGTTCAGTCAGACGGCGGAGGTGATGACGTCGTACGCAGCGTTGGAAAAGAAGTTGGTGCCGTTGGGATGGGAGCGGTATTACGATGATCCAAATCTGTTGCAATTTCATAAGAGATCAACGGTCCACCTTATCTCTCTCCCCAAAGATTTTGCTAAGTTCAAATCCATGCATATGTACGACATCGTCGTTAAGAATCGAAACCATTTCGAAGTTATTGACACTTAA MSGVWVFRNGVVRLVENGGGSAAEGGGQQSQLRRKALVFSQTAEVMTSYAALEKKLVPLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVVKNRNHFEVIDT*
BLAST of Csa6G194670 vs. Swiss-Prot
Match: FLP2_ORYSJ (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0933500 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 5.7e-34 Identity = 77/126 (61.11%), Postives = 87/126 (69.05%), Query Frame = 1
BLAST of Csa6G194670 vs. Swiss-Prot
Match: FLP1_ORYSJ (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica GN=RAA1 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.1e-32 Identity = 70/114 (61.40%), Postives = 84/114 (73.68%), Query Frame = 1
BLAST of Csa6G194670 vs. Swiss-Prot
Match: FLP3_ORYSJ (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os02g0460200 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-31 Identity = 71/115 (61.74%), Postives = 83/115 (72.17%), Query Frame = 1
BLAST of Csa6G194670 vs. Swiss-Prot
Match: FPF1_ARATH (Flowering-promoting factor 1 OS=Arabidopsis thaliana GN=FPF1 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.4e-30 Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 1
BLAST of Csa6G194670 vs. Swiss-Prot
Match: FLP1_ARATH (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana GN=FLP1 PE=2 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 8.4e-30 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 1
BLAST of Csa6G194670 vs. TrEMBL
Match: A0A0A0KCC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194670 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Csa6G194670 vs. TrEMBL
Match: A0A061EW40_THECC (Flowering promoting factor 1 OS=Theobroma cacao GN=TCM_021194 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 4.8e-40 Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 1
BLAST of Csa6G194670 vs. TrEMBL
Match: B9HSB8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s02530g PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-39 Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 1
BLAST of Csa6G194670 vs. TrEMBL
Match: B9RT38_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0680830 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-39 Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 1
BLAST of Csa6G194670 vs. TrEMBL
Match: A0A067K6A6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18865 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 3.1e-39 Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 1
BLAST of Csa6G194670 vs. TAIR10
Match: AT5G24860.1 (AT5G24860.1 flowering promoting factor 1) HSP 1 Score: 131.0 bits (328), Expect = 4.8e-31 Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 1
BLAST of Csa6G194670 vs. TAIR10
Match: AT4G31380.1 (AT4G31380.1 FPF1-like protein 1) HSP 1 Score: 131.0 bits (328), Expect = 4.8e-31 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 1
BLAST of Csa6G194670 vs. TAIR10
Match: AT5G10625.1 (AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)) HSP 1 Score: 125.6 bits (314), Expect = 2.0e-29 Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 1
BLAST of Csa6G194670 vs. NCBI nr
Match: gi|449450674|ref|XP_004143087.1| (PREDICTED: flowering-promoting factor 1-like protein 1 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Csa6G194670 vs. NCBI nr
Match: gi|659117172|ref|XP_008458459.1| (PREDICTED: flowering-promoting factor 1-like protein 1 [Cucumis melo]) HSP 1 Score: 211.1 bits (536), Expect = 1.0e-51 Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Csa6G194670 vs. NCBI nr
Match: gi|1012109981|ref|XP_015959724.1| (PREDICTED: flowering-promoting factor 1-like protein 3 [Arachis duranensis]) HSP 1 Score: 177.2 bits (448), Expect = 1.6e-41 Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of Csa6G194670 vs. NCBI nr
Match: gi|1021506210|ref|XP_016196518.1| (PREDICTED: flowering-promoting factor 1-like protein 3 [Arachis ipaensis]) HSP 1 Score: 175.3 bits (443), Expect = 6.2e-41 Identity = 88/112 (78.57%), Postives = 94/112 (83.93%), Query Frame = 1
BLAST of Csa6G194670 vs. NCBI nr
Match: gi|590661036|ref|XP_007035563.1| (Flowering promoting factor 1 [Theobroma cacao]) HSP 1 Score: 171.8 bits (434), Expect = 6.9e-40 Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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