Csa6G118360 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G118360
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Zinc finger family protein; contains IPR007087 (Zinc finger, C2H2)
Location	Chr6 : 8211027 .. 8211521 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTGTTTTGGATCTCAGATTGGGGCTTAATTAA

mRNA sequence

ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTGTTTTGGATCTCAGATTGGGGCTTAATTAA

Coding sequence (CDS)

ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTGTTTTGGATCTCAGATTGGGGCTTAATTAA

Protein sequence

MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVVCEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN*

Homology

[Close]

BLAST of Csa6G118360 vs. Swiss-Prot
Match: ZAT3_ARATH (Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20
Identity = 54/112 (48.21%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 10  AQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPER 69
           A  SS++  S  KP K+ K    N        IT PC+ECG+KF SWKALFGHMRCHPER
Sbjct: 49  ASSSSSSPKSASKP-KYTKKPDPNAPK-----ITRPCTECGRKFWSWKALFGHMRCHPER 108

Query: 70  QWRGINPPPIFLHPPSA----------------AQLDHEIATSLIMLSNAPP 106
           QWRGINPPP +  P +A                ++ DHE+A+ L+MLSN  P
Sbjct: 109 QWRGINPPPNYRVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLSNGTP 154

HSP 2 Score: 34.7 bits (78), Expect = 1.2e+00
Identity = 18/35 (51.43%), Postives = 23/35 (65.71%), Query Frame = 1


Query: 129 SGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGL 164
           SG LDLN+PP ++++    S+  +SG  LDLRLGL
Sbjct: 254 SGALDLNVPPTIQDL----STSDTSGCCLDLRLGL 284

[Close]

BLAST of Csa6G118360 vs. Swiss-Prot
Match: ZAT2_ARATH (Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.0e-17
Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 1


Query: 2   DLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPH------------NITPPCSEC 61
           D+P  S N    S   N RRK TK +    + ++S++P              I  PC+EC
Sbjct: 12  DIPFASSNVTLPSYNQNPRRKRTK-LTNNEVGSSSSSPRPKPVTQPDPDASQIARPCTEC 71

Query: 62  GKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSA-----------AQLDHEIATSLI 103
           GK+F S KALFGHMRCHPERQWRGINPP  F    ++           ++ +H IA+ L+
Sbjct: 72  GKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASSSSSWDPSEEEHNIASCLL 131

[Close]

BLAST of Csa6G118360 vs. TrEMBL
Match: A0A0A0KAW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G118360 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.1e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60
           MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF
Sbjct: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60

Query: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120
           GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV
Sbjct: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120

Query: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN 165
           CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN
Sbjct: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN 164

[Close]

BLAST of Csa6G118360 vs. TrEMBL
Match: M0U5N6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-21
Identity = 61/145 (42.07%), Postives = 74/145 (51.03%), Query Frame = 1


Query: 6   FSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRC 65
           FSF    +   T  RRKP     TT      A P   TPPC+ECGK+F SWKALFGHMRC
Sbjct: 71  FSFPPTSTMAKTKPRRKPDLAAATT------AGPKATTPPCTECGKRFSSWKALFGHMRC 130

Query: 66  HPERQWRGINPPPIFLHP-PSAAQL--------DHEIATSLIMLSNAPPDPGRGTSEGRE 125
           HPERQWRGINPPP    P P A+          ++E+A SLI+LS  P          R 
Sbjct: 131 HPERQWRGINPPPHLRRPLPLASPTPEEHFTDEEYEVAASLILLSRGP---------HRN 190

Query: 126 AVVVCEHKPRAHSGLLDLNLPPPME 142
              +C  +P     +   + P P +
Sbjct: 191 ISALCRAEPERADAMQPFSFPQPQQ 200

[Close]

BLAST of Csa6G118360 vs. TrEMBL
Match: A0A0K9R027_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128760 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-19
Identity = 56/123 (45.53%), Postives = 69/123 (56.10%), Query Frame = 1


Query: 1   MDLPLFSFNAQRSSTTTNSRRKP--TKFIKTTTLNNASATPH----NITPPCSECGKKFC 60
           + LP        SS+ T S RK   +K ++  T   A   P      ITPPC+ECGK F 
Sbjct: 47  IQLPFLPPTTPTSSSPTASLRKKRRSKLLRIDTATAAPKKPEPSATEITPPCTECGKTFW 106

Query: 61  SWKALFGHMRCHPERQWRGINPPPIFLHPPS-----AAQLDHEIATSLIMLSNAPPDPGR 113
           SWKALFGHMRCHPERQWRGINPPP     P+     +   D E+A SL++L+  P  P  
Sbjct: 107 SWKALFGHMRCHPERQWRGINPPPHLRQRPTPPPTPSTTDDREVAASLLLLAAGPTSPDF 166

[Close]

BLAST of Csa6G118360 vs. TrEMBL
Match: V4SA24_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030233mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-19
Identity = 59/127 (46.46%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 5   LFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMR 64
           L   +A  +S+ + S  KP K+ K             IT PCSECGKKF SWKALFGHMR
Sbjct: 46  LIKIDASATSSCSASVSKP-KYAK-----KPDPGAPKITRPCSECGKKFWSWKALFGHMR 105

Query: 65  CHPERQWRGINPPPIFLHPPSAAQ-----------LDHEIATSLIMLSNAPPDPGRGTSE 121
           CHPERQWRGINPPP F  P S  +            DHE+A  L+ML+N   D G GT  
Sbjct: 106 CHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANG--DVGVGTGS 164

[Close]

BLAST of Csa6G118360 vs. TrEMBL
Match: V4SA24_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030233mg PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.6e-02
Identity = 40/139 (28.78%), Postives = 58/139 (41.73%), Query Frame = 1


Query: 46  CSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPP 105
           C+ C K F S +AL GH   H     + +             ++DH+  +  I+  N   
Sbjct: 181 CNSCKKVFGSHQALGGHRASH-----KHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDD 240

Query: 106 DPGRGTSEGREAVVVCE----------HK---------PRAHSGL--LDLNLPPPMEEIE 164
           +       G +  +             HK         P  + GL  LDLNLP P+++  
Sbjct: 241 ERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPVDD-- 300

HSP 2 Score: 102.8 bits (255), Expect = 4.0e-19
Identity = 59/127 (46.46%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 5   LFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMR 64
           L   +A  +S+ + S  KP K+ K             IT PCSECGKKF SWKALFGHMR
Sbjct: 46  LIKIDASATSSCSASVSKP-KYAK-----KPDPGAPKITRPCSECGKKFWSWKALFGHMR 105

Query: 65  CHPERQWRGINPPPIFLHPPSAAQ-----------LDHEIATSLIMLSNAPPDPGRGTSE 121
           CHPERQWRGINPPP F  P S  +            DHE+A  L+ML+N   D G GT  
Sbjct: 106 CHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANG--DVGVGTGS 164

[Close]

BLAST of Csa6G118360 vs. TAIR10
Match: AT4G35280.1 (AT4G35280.1 C2H2-like zinc finger protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 54/112 (48.21%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 10  AQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPER 69
           A  SS++  S  KP K+ K    N        IT PC+ECG+KF SWKALFGHMRCHPER
Sbjct: 49  ASSSSSSPKSASKP-KYTKKPDPNAPK-----ITRPCTECGRKFWSWKALFGHMRCHPER 108

Query: 70  QWRGINPPPIFLHPPSA----------------AQLDHEIATSLIMLSNAPP 106
           QWRGINPPP +  P +A                ++ DHE+A+ L+MLSN  P
Sbjct: 109 QWRGINPPPNYRVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLSNGTP 154

HSP 2 Score: 34.7 bits (78), Expect = 6.8e-02
Identity = 18/35 (51.43%), Postives = 23/35 (65.71%), Query Frame = 1


Query: 129 SGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGL 164
           SG LDLN+PP ++++    S+  +SG  LDLRLGL
Sbjct: 254 SGALDLNVPPTIQDL----STSDTSGCCLDLRLGL 284

[Close]

BLAST of Csa6G118360 vs. TAIR10
Match: AT2G17180.1 (AT2G17180.1 C2H2-like zinc finger protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18
Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 1


Query: 2   DLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPH------------NITPPCSEC 61
           D+P  S N    S   N RRK TK +    + ++S++P              I  PC+EC
Sbjct: 12  DIPFASSNVTLPSYNQNPRRKRTK-LTNNEVGSSSSSPRPKPVTQPDPDASQIARPCTEC 71

Query: 62  GKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSA-----------AQLDHEIATSLI 103
           GK+F S KALFGHMRCHPERQWRGINPP  F    ++           ++ +H IA+ L+
Sbjct: 72  GKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASSSSSWDPSEEEHNIASCLL 131

[Close]

BLAST of Csa6G118360 vs. TAIR10
Match: AT5G56200.1 (AT5G56200.1 C2H2 type zinc finger transcription factor family)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 28/51 (54.90%), Postives = 33/51 (64.71%), Query Frame = 1


Query: 46  CSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFL-HP---PSAAQLDHE 93
           C  C KKF S KAL+GHMR HP+R W+G+ PPP  L HP    S++ LDH+
Sbjct: 132 CCVCYKKFTSMKALYGHMRFHPDRGWKGVLPPPPLLPHPLGNSSSSTLDHD 182

HSP 2 Score: 34.3 bits (77), Expect = 8.9e-02
Identity = 14/21 (66.67%), Postives = 13/21 (61.90%), Query Frame = 1


Query: 46  CSECGKKFCSWKALFGHMRCH 67
           C ECGK+F S KAL GH R H
Sbjct: 81  CCECGKRFVSGKALGGHKRIH 101

[Close]

BLAST of Csa6G118360 vs. TAIR10
Match: AT4G35610.1 (AT4G35610.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.8e-08
Identity = 27/60 (45.00%), Postives = 31/60 (51.67%), Query Frame = 1


Query: 21  RKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIF 80
           +KP K  K  T       P    P C  CG+ F SWKA+FGHMR H +R ++G  PPP F
Sbjct: 121 KKPKKKAKELT------HPPKGPPVCHICGRGFGSWKAVFGHMRAHRDRNYQGFLPPPTF 174

[Close]

BLAST of Csa6G118360 vs. TAIR10
Match: AT4G35700.1 (AT4G35700.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 1


Query: 44  PPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIF 81
           P C+ CGK F SWKA+FGH+R H +R + G  PPP F
Sbjct: 142 PMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTF 178

[Close]

BLAST of Csa6G118360 vs. NCBI nr
Match: gi|449444596|ref|XP_004140060.1| (PREDICTED: zinc finger protein ZAT3 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 3.0e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60
           MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF
Sbjct: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60

Query: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120
           GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV
Sbjct: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120

Query: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN 165
           CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN
Sbjct: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVLDLRLGLN 164

[Close]

BLAST of Csa6G118360 vs. NCBI nr
Match: gi|672126976|ref|XP_008786947.1| (PREDICTED: zinc finger protein ZAT3-like [Phoenix dactylifera])

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-23
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 1


Query: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60
           + LP   F +   +T T  + +P +       + ++ATP   TPPC+ECGK+F SWKALF
Sbjct: 51  LPLPSRDFVSYPPTTATPKKPRPPRRKPDAAASTSTATPPKTTPPCTECGKRFSSWKALF 110

Query: 61  GHMRCHPERQWRGINPPPIF--LHPPSAAQL---DHEIATSLIMLSNAPPDPGRG 111
           GHMRCHPERQWRGINPPP F  L  P+AA     ++++ATSLIML+N  P    G
Sbjct: 111 GHMRCHPERQWRGINPPPHFRRLSSPAAAHFSDEEYQVATSLIMLANGAPRDEHG 165

[Close]

BLAST of Csa6G118360 vs. NCBI nr
Match: gi|743821398|ref|XP_010932023.1| (PREDICTED: zinc finger protein ZAT2-like [Elaeis guineensis])

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 59/115 (51.30%), Postives = 71/115 (61.74%), Query Frame = 1


Query: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60
           + LP   F      T T  + +P +  K     + SA     TPPC+ECGK+F SWKALF
Sbjct: 66  LPLPSPDFTPYLPPTATPKKPRPPRR-KPDAAASTSAATAKTTPPCTECGKRFSSWKALF 125

Query: 61  GHMRCHPERQWRGINPPPIF--LHPPSAAQL---DHEIATSLIMLSNAPPDPGRG 111
           GHMRCHPERQWRGINPPP F  L  P AAQ    ++++ATSLIML+N PP    G
Sbjct: 126 GHMRCHPERQWRGINPPPHFRRLSSPGAAQFSDEEYQVATSLIMLANGPPRDEHG 179

[Close]

BLAST of Csa6G118360 vs. NCBI nr
Match: gi|747082735|ref|XP_011088704.1| (PREDICTED: zinc finger protein ZAT3-like [Sesamum indicum])

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-21
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 1


Query: 14  STTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPERQWRG 73
           +  T S+ KPT     +T    S+ P  IT PC+ECGKKF SWKALFGHMRCHPERQWRG
Sbjct: 44  AAATTSKPKPT-----STRKPDSSAP-KITRPCTECGKKFWSWKALFGHMRCHPERQWRG 103

Query: 74  INPPP--IFLHPPSAAQLDHEIATSLIMLSNAP 105
           INPPP  +  H  ++ + DHEIAT L+ML+NAP
Sbjct: 104 INPPPNLVRQHLSASTEEDHEIATCLLMLANAP 130

[Close]

BLAST of Csa6G118360 vs. NCBI nr
Match: gi|1009150477|ref|XP_015893038.1| (PREDICTED: zinc finger protein ZAT3 [Ziziphus jujuba])

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20
Identity = 57/120 (47.50%), Postives = 65/120 (54.17%), Query Frame = 1


Query: 18  NSRRKPTKFIKTTTLNNA-------------SATPHNITPPCSECGKKFCSWKALFGHMR 77
           N RRK +K I+  T   +               T   IT PCSECGKKF SWKALFGHMR
Sbjct: 44  NPRRKRSKLIRLETAATSPIGISKPKYGKKPDPTAPKITRPCSECGKKFWSWKALFGHMR 103

Query: 78  CHPERQWRGINPPPIFLHPPSAAQL-------------------DHEIATSLIMLSNAPP 106
           CHPERQWRGINPPP F  P S  +L                   DHE+A  L+ML+N+PP
Sbjct: 104 CHPERQWRGINPPPNFRRPISPIKLPSNSSEPPPRRPPLDLTEDDHEVAACLLMLANSPP 163

The following BLAST results are available for this feature:

BLAST of Csa6G118360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZAT3_ARATH	2.3e-20	48.21	Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=1 SV=1	[more]
ZAT2_ARATH	7.0e-17	40.32	Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=1 SV=1	[more]

BLAST of Csa6G118360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAW8_CUCSA	2.1e-92	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G118360 PE=4 SV=1	[more]
M0U5N6_MUSAM	7.3e-21	42.07	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A0K9R027_SPIOL	2.3e-19	45.53	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128760 PE=4 SV=1	[more]
V4SA24_9ROSI	4.0e-19	46.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030233mg PE=4 SV=1	[more]
V4SA24_9ROSI	7.6e-02	28.78	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030233mg PE=4 SV=1	[more]

BLAST of Csa6G118360 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35280.1	1.3e-21	48.21	C2H2-like zinc finger protein	[more]
AT2G17180.1	4.0e-18	40.32	C2H2-like zinc finger protein	[more]
AT5G56200.1	2.6e-09	54.90	C2H2 type zinc finger transcription factor family	[more]
AT4G35610.1	4.8e-08	45.00	zinc finger (C2H2 type) family protein	[more]
AT4G35700.1	1.4e-07	56.76	zinc finger (C2H2 type) family protein	[more]

BLAST of Csa6G118360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444596\|ref\|XP_004140060.1\|	3.0e-92	100.00	PREDICTED: zinc finger protein ZAT3 [Cucumis sativus]	[more]
gi\|672126976\|ref\|XP_008786947.1\|	3.8e-23	49.57	PREDICTED: zinc finger protein ZAT3-like [Phoenix dactylifera]	[more]
gi\|743821398\|ref\|XP_010932023.1\|	2.5e-22	51.30	PREDICTED: zinc finger protein ZAT2-like [Elaeis guineensis]	[more]
gi\|747082735\|ref\|XP_011088704.1\|	4.7e-21	59.14	PREDICTED: zinc finger protein ZAT3-like [Sesamum indicum]	[more]
gi\|1009150477\|ref\|XP_015893038.1\|	6.8e-20	47.50	PREDICTED: zinc finger protein ZAT3 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009987	cellular process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G118360.1	Csa6G118360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 46..68 score: 2.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 46..66 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 44..71 score: 9
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 46..66 score: 5.
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 44..105 score: 6.0
None	No IPR available	PANTHER	PTHR26374:SF186	SUBFAMILY NOT NAMED	coord: 44..105 score: 6.0
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 45..69 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G118360	Cla015751	Watermelon (97103) v1	cuwmB516
Csa6G118360	ClCG02G003500	Watermelon (Charleston Gray)	cuwcgB443
Csa6G118360	Lsi11G012800	Bottle gourd (USVL1VR-Ls)	culsiB428
Csa6G118360	Lsi10G008280	Bottle gourd (USVL1VR-Ls)	culsiB409
Csa6G118360	Cla97C02G030100	Watermelon (97103) v2	cuwmbB432
Csa6G118360	Bhi05G001363	Wax gourd	cuwgoB561
Csa6G118360	CSPI06G09700	Wild cucumber (PI 183967)	cpicuB314
Csa6G118360	Cucsa.099630	Cucumber (Gy14) v1	cgycuB110
Csa6G118360	Cucsa.119850	Cucumber (Gy14) v1	cgycuB155
Csa6G118360	CmaCh19G007930	Cucurbita maxima (Rimu)	cmacuB521
Csa6G118360	CmaCh11G013360	Cucurbita maxima (Rimu)	cmacuB141
Csa6G118360	CmoCh19G008140	Cucurbita moschata (Rifu)	cmocuB513
Csa6G118360	CmoCh20G007130	Cucurbita moschata (Rifu)	cmocuB546
Csa6G118360	Cp4.1LG15g06370	Cucurbita pepo (Zucchini)	cpecuB250
Csa6G118360	Cp4.1LG16g03520	Cucurbita pepo (Zucchini)	cpecuB292
Csa6G118360	CsGy7G001630	Cucumber (Gy14) v2	cgybcuB321
Csa6G118360	CsGy6G009820	Cucumber (Gy14) v2	cgybcuB282
Csa6G118360	Carg04091	Silver-seed gourd	carcuB0227
Csa6G118360	Carg16136	Silver-seed gourd	carcuB0378

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa6G118360	Csa7G024090	Cucumber (Chinese Long) v2	cucuB171

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G118360	Watermelon (97103) v2	cuwmbB431
Csa6G118360	Watermelon (97103) v2	cuwmbB447
Csa6G118360	Cucurbita maxima (Rimu)	cmacuB555
Csa6G118360	Cucurbita maxima (Rimu)	cmacuB635
Csa6G118360	Cucurbita moschata (Rifu)	cmocuB625
Csa6G118360	Melon (DHL92) v3.5.1	cumeB425
Csa6G118360	Watermelon (Charleston Gray)	cuwcgB457
Csa6G118360	Watermelon (97103) v1	cuwmB443
Csa6G118360	Cucurbita pepo (Zucchini)	cpecuB746
Csa6G118360	Melon (DHL92) v3.6.1	cumedB405
Csa6G118360	Silver-seed gourd	carcuB0871