Csa6G041750 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G041750
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Arabidopsis halleri subsp. halleri ORF1, ORF2, PDF1.2a, ORF3, ORF4, PDF1.2c and ORF5 genes, clone BAC clone 1N20; contains IPR012881 (Protein of unknown function DUF1685)
Location	Chr6 : 3157317 .. 3158054 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCGTTTGGCCGAAGAACCAAAATTACAAACGACCGAAACCGCCGAATCTCAAAAATTCCAAGAAAAAAAAAAATGAGTCCCTTCGAATCTCAGATTTCTCCTGAATCCGCCATTGAAGGGGACCCAGAAGCTCAAACCCTCCATTTCCAATCTGAATTCAGCTCTGAACACGATCGCGACGAGTCAGTTTTTCCTACCTACTGGAACAACACCAAGAAGAACCAGATCTTGCTCGAGGGTTTTGTCGAGGCTTCGGATGAGGATAATTTGACTAGAACAAAAAGCTTAACAGATGACGATCTTGAGGATCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGACGAGATTCCTGAGCTTTGTAACACCTTGCCGGCCCTCGAACTCTGTTATTCCATGAACCAGAAGTTTATGGATGAACACCAAAAGGTTCCGGAAAATCCTTTACCCGAGTCGATGGATTCTGTTTCCGGTCCCATTCCGAATTGGAAGATCTCTAGTCCTGGTAAGCCGTTCTGTTCAATTCTTAATCTCAATATCGCTTGTAAAATTGAAAAGGAATTTCTCTTTGTGTGGTTAACTGTTCTTCAGTTTATGAACTTTTTGTTTAGGTTGAGTATGATTCAGTTTGAAATTGTTCTATGTTCAGGTGATCATCCAGAAGATGTTAAGGCCAGGCTCAAATACTGGGCGCAAGCAGTGGCTTGTACTGTCAGATTATGCAACTGA

mRNA sequence

ATGAGTCCCTTCGAATCTCAGATTTCTCCTGAATCCGCCATTGAAGGGGACCCAGAAGCTCAAACCCTCCATTTCCAATCTGAATTCAGCTCTGAACACGATCGCGACGAGTCAGTTTTTCCTACCTACTGGAACAACACCAAGAAGAACCAGATCTTGCTCGAGGGTTTTGTCGAGGCTTCGGATGAGGATAATTTGACTAGAACAAAAAGCTTAACAGATGACGATCTTGAGGATCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGACGAGATTCCTGAGCTTTGTAACACCTTGCCGGCCCTCGAACTCTGTTATTCCATGAACCAGAAGTTTATGGATGAACACCAAAAGGTTCCGGAAAATCCTTTACCCGAGTCGATGGATTCTGTTTCCGGTCCCATTCCGAATTGGAAGATCTCTAGTCCTGGTGATCATCCAGAAGATGTTAAGGCCAGGCTCAAATACTGGGCGCAAGCAGTGGCTTGTACTGTCAGATTATGCAACTGA

Coding sequence (CDS)

ATGAGTCCCTTCGAATCTCAGATTTCTCCTGAATCCGCCATTGAAGGGGACCCAGAAGCTCAAACCCTCCATTTCCAATCTGAATTCAGCTCTGAACACGATCGCGACGAGTCAGTTTTTCCTACCTACTGGAACAACACCAAGAAGAACCAGATCTTGCTCGAGGGTTTTGTCGAGGCTTCGGATGAGGATAATTTGACTAGAACAAAAAGCTTAACAGATGACGATCTTGAGGATCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGACGAGATTCCTGAGCTTTGTAACACCTTGCCGGCCCTCGAACTCTGTTATTCCATGAACCAGAAGTTTATGGATGAACACCAAAAGGTTCCGGAAAATCCTTTACCCGAGTCGATGGATTCTGTTTCCGGTCCCATTCCGAATTGGAAGATCTCTAGTCCTGGTGATCATCCAGAAGATGTTAAGGCCAGGCTCAAATACTGGGCGCAAGCAGTGGCTTGTACTGTCAGATTATGCAACTGA

Protein sequence

MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQKVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN*

Homology

[Close]

BLAST of Csa6G041750 vs. TrEMBL
Match: A0A0A0K8B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041750 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-97
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1


Query: 1   MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA 60
           MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA
Sbjct: 1   MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA 60

Query: 61  SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ 120
           SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ
Sbjct: 61  SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ 120

Query: 121 KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN
Sbjct: 121 KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 172

[Close]

BLAST of Csa6G041750 vs. TrEMBL
Match: A0A103YFT0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013348 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 103/171 (60.23%), Postives = 123/171 (71.93%), Query Frame = 1


Query: 10  PESAIEGDPEAQTLHFQSEFSSEHDRDESVF------PTYWNNTKKNQILLEGFVEASDE 69
           P S    + + Q L F  + + +H      F      P    + +KNQ+ L+G+VE  DE
Sbjct: 8   PTSTFSQEDQYQDLDFSDQTTFDHQNSSGFFKKQDSWPKNSIHRRKNQVFLQGYVETPDE 67

Query: 70  DNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQKVP 129
           D L R+KSLTD+DL++LKGC+DLGF F YDEIPELCNTLPALELCYSM+QKF+DEHQK P
Sbjct: 68  DELVRSKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDEHQKSP 127

Query: 130 ENPLPESMDSVSGPIP--NWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           E+P    +D  + P P  NWKISSPGDHPEDVKARLKYWAQAVACTVRLCN
Sbjct: 128 ESPSSAVVDETASPPPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 178

[Close]

BLAST of Csa6G041750 vs. TrEMBL
Match: M5XT12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011892mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-52
Identity = 109/172 (63.37%), Postives = 130/172 (75.58%), Query Frame = 1


Query: 12  SAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYW---------NNTKKNQILLEGFVEASD 71
           S+I  +P+ QT H   + SS  +    +    W            KKNQ+LLEG+VE++D
Sbjct: 22  SSIRKNPDEQT-HQSLQTSSSSEFMLGIGEEEWPKLNSLKSKKKKKKNQVLLEGYVESAD 81

Query: 72  EDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQKV 131
           ED+L+RTKSLTD+DL++LKGC+DLGF F Y+EIPELCNTLPALELCYSM+QKFMDE+QK 
Sbjct: 82  EDDLSRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLPALELCYSMSQKFMDENQKS 141

Query: 132 PEN--PLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           PEN     +S  SVS PI NWKISSPGDHPEDVKARLKYWAQAVACTVRLC+
Sbjct: 142 PENSPTTVDSCPSVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS 192

[Close]

BLAST of Csa6G041750 vs. TrEMBL
Match: V4VT44_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022453mg PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-51
Identity = 109/178 (61.24%), Postives = 128/178 (71.91%), Query Frame = 1


Query: 5   ESQISPESAIEGDPEAQTLHFQSEFSS------EHDRDESVFPTYWNNTKKNQILLEGFV 64
           ES +    AI  + E   L+ + +F +      + +  E +        KKNQ+LLEG+V
Sbjct: 9   ESWVDSSEAIM-EEETHDLNQEPQFLTITRSGFDEEESEELLKNENKKKKKNQVLLEGYV 68

Query: 65  EASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDE 124
           E   ED+L RTKSLTD+DL++LKGC+DLGF F YDEIPELCNTLPALELCYSM+QKFMDE
Sbjct: 69  ETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDE 128

Query: 125 H--QKVPEN--PLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           H  QK PE+    P S D VS PI NWKISSPGDHPEDVKARLKYWAQAVACTVRLC+
Sbjct: 129 HQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS 185

[Close]

BLAST of Csa6G041750 vs. TrEMBL
Match: A0A067DKT5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029447mg PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-51
Identity = 109/178 (61.24%), Postives = 128/178 (71.91%), Query Frame = 1


Query: 5   ESQISPESAIEGDPEAQTLHFQSEFSS------EHDRDESVFPTYWNNTKKNQILLEGFV 64
           ES +    AI  + E   L+ + +F +      + +  E +        KKNQ+LLEG+V
Sbjct: 9   ESWVDSSEAIM-EEETHDLNQEPQFLTITRSGFDEEESEELLKNENKKKKKNQVLLEGYV 68

Query: 65  EASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDE 124
           E   ED+L RTKSLTD+DL++LKGC+DLGF F YDEIPELCNTLPALELCYSM+QKFMDE
Sbjct: 69  ETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDE 128

Query: 125 H--QKVPEN--PLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           H  QK PE+    P S D VS PI NWKISSPGDHPEDVKARLKYWAQAVACTVRLC+
Sbjct: 129 HQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS 185

[Close]

BLAST of Csa6G041750 vs. TAIR10
Match: AT1G05870.1 (AT1G05870.1 Protein of unknown function (DUF1685))

HSP 1 Score: 183.7 bits (465), Expect = 9.5e-47
Identity = 92/137 (67.15%), Postives = 108/137 (78.83%), Query Frame = 1


Query: 48  KKNQILLEGFVEAS-------DEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCN 107
           KK+Q+LLEG+VE +        +D+LTR+KSLTDDDLEDL+GC+DLGF F YDEIPELCN
Sbjct: 53  KKSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEIPELCN 112

Query: 108 TLPALELCYSMNQKFMDEHQ-KVPENPLPESMDS----VSGPIPNWKISSPGDHPEDVKA 167
           TLPALELCYSM+QKF+D+ Q K PE    E   S     + PI NWKISSPGD+P+DVKA
Sbjct: 113 TLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTATPIANWKISSPGDNPDDVKA 172

Query: 168 RLKYWAQAVACTVRLCN 173
           RLKYWAQAVACTV+LC+
Sbjct: 173 RLKYWAQAVACTVQLCS 189

[Close]

BLAST of Csa6G041750 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-46
Identity = 99/177 (55.93%), Postives = 121/177 (68.36%), Query Frame = 1


Query: 9   SPESAIEGDPEAQTLHFQSEFSSEHDRDE---------SVFPTYWNNTKKNQILLEGFV- 68
           S E+ ++ D E  T  F S   SE + +E         S   T     KK+ +LLEG+V 
Sbjct: 12  SYEADVDSDSEISTSSFSSCSYSESEEEEINNGFGVVQSKKQTKKLEKKKSNVLLEGYVV 71

Query: 69  EASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDE 128
           +++  D+L RTKSLTDDDLE+LKGCVDLGF F Y+EIPELCNTLPALELCYSM+QKF+D+
Sbjct: 72  DSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKFIDQ 131

Query: 129 HQKVPENPLPES----MDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLC 172
                 +  PE     +DS   PI +WKISSPGD+P+DVKARLK+WAQAVACTVRLC
Sbjct: 132 DHHHHSSSSPEKKSSVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTVRLC 188

[Close]

BLAST of Csa6G041750 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685))

HSP 1 Score: 182.6 bits (462), Expect = 2.1e-46
Identity = 88/129 (68.22%), Postives = 100/129 (77.52%), Query Frame = 1


Query: 48  KKNQILLEGFVEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALEL 107
           KK+Q+LLEG+    D+D+LTR KSLTDDDLE+LKGC+DLGF F YDEIPELCNTLPALEL
Sbjct: 75  KKSQVLLEGYA-LDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALEL 134

Query: 108 CYSMNQKFMDE----HQKVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQA 167
           CYSM+QKF+D+    H K  E        + + PI NWKISSPGD P+DVKARLKYWAQ 
Sbjct: 135 CYSMSQKFLDDKQQNHHKSQEEDDSSPPPTTTAPIANWKISSPGDDPDDVKARLKYWAQT 194

Query: 168 VACTVRLCN 173
           VACTVRLC+
Sbjct: 195 VACTVRLCS 202

[Close]

BLAST of Csa6G041750 vs. TAIR10
Match: AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-21
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 1


Query: 72  LTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDE-HQKVPENPLPES 131
           LTDDDLE LKGC+DLGF F YDEIP LC TLPALELCYSM+QK +D+ H    + P+  S
Sbjct: 843 LTDDDLEVLKGCLDLGFGFNYDEIPALCKTLPALELCYSMSQKNLDDKHTPSLQLPIGRS 902

Query: 132 MDSVSGPIPNWKISSPGDHPEDVKARLKYWAQA 164
           +      +P+       D+P+DVKARLK WAQA
Sbjct: 903 L------VPSC------DNPDDVKARLKCWAQA 923

[Close]

BLAST of Csa6G041750 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 1


Query: 44  WNNTKKNQILLEGFVEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLP 103
           W   ++  + ++   + S  +N   +  LTD+DL +LKG ++LGF F  +   +LCNTLP
Sbjct: 53  WEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGFSEEAGQKLCNTLP 112

Query: 104 ALELCYSMNQKFMDEHQKVPENPLPESMDSV---SGPIP--------NWKISSPGDHPED 163
           AL+L +++N++          N    S+ S    S  IP        + KI  PGD+P+ 
Sbjct: 113 ALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKILCPGDNPQQ 172

Query: 164 VKARLKYWAQAVACTV 169
           VK RL++WAQAVAC++
Sbjct: 173 VKQRLRHWAQAVACSL 188

[Close]

BLAST of Csa6G041750 vs. NCBI nr
Match: gi|449446235|ref|XP_004140877.1| (PREDICTED: uncharacterized protein LOC101222799 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 1.9e-97
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1


Query: 1   MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA 60
           MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA
Sbjct: 1   MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA 60

Query: 61  SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ 120
           SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ
Sbjct: 61  SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ 120

Query: 121 KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN
Sbjct: 121 KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 172

[Close]

BLAST of Csa6G041750 vs. NCBI nr
Match: gi|659089841|ref|XP_008445710.1| (PREDICTED: uncharacterized protein LOC103488660 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 4.1e-92
Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 1


Query: 1   MSPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNTKKNQILLEGFVEA 60
           MS F+SQISP SAIEGDPEAQTLHFQSEFSSEHDRDESV PTYWNNTKKNQILLEGFVEA
Sbjct: 1   MSSFQSQISPVSAIEGDPEAQTLHFQSEFSSEHDRDESVLPTYWNNTKKNQILLEGFVEA 60

Query: 61  SDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQ 120
           SD+DNLTRTKSLTDDDLE+LKGCVDLGFAFCYDEIPELCNTLPALELCYSM+QKFMDEHQ
Sbjct: 61  SDDDNLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQKFMDEHQ 120

Query: 121 KVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           K PENPLPES+DSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN
Sbjct: 121 KEPENPLPESVDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 172

[Close]

BLAST of Csa6G041750 vs. NCBI nr
Match: gi|1009170882|ref|XP_015866437.1| (PREDICTED: uncharacterized protein LOC107404017 [Ziziphus jujuba])

HSP 1 Score: 218.4 bits (555), Expect = 9.8e-54
Identity = 111/178 (62.36%), Postives = 131/178 (73.60%), Query Frame = 1


Query: 5   ESQISPESAIEGDPEAQTLHFQSEFSS-------EHDRDESVFPTYWNNTKKNQILLEGF 64
           ES +   S  + +P+ +TL  QS  SS       EH+ D           KKNQ+LLE +
Sbjct: 9   ESWVFSTSPYQENPDEKTLTDQSRTSSGSSLVSQEHEEDWPRMKNEKKKKKKNQVLLEAY 68

Query: 65  VEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMD 124
           VEA+DED+LTRTKSLTD+DL++LKGC+DLGF F YDEIPELCNTLPALELCYSM+QKF D
Sbjct: 69  VEAADEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFND 128

Query: 125 EHQKVPEN---PLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           + QK PE+   P  +S   VS PI NWKISSPGDHPEDVKARLK+WAQAVACTVRLC+
Sbjct: 129 DQQKSPESSPAPTADSCSPVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRLCS 186

[Close]

BLAST of Csa6G041750 vs. NCBI nr
Match: gi|645231918|ref|XP_008222622.1| (PREDICTED: uncharacterized protein LOC103322479 [Prunus mume])

HSP 1 Score: 215.3 bits (547), Expect = 8.3e-53
Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 1


Query: 12  SAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYW--------NNTKKNQILLEGFVEASDE 71
           S+I  +P+ QT H   + SS  +    +    W           KKNQ+LLEG+VE++DE
Sbjct: 13  SSIRKNPDEQT-HQSLQTSSSSEIMLGIGEEEWPKLKSLKSKKKKKNQVLLEGYVESADE 72

Query: 72  DNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEHQKVP 131
           D+L+RTKSLTD+DL++LKGC+DLGF F Y+EIPELCNTLPALELCYSM+QKFMDE+QK+P
Sbjct: 73  DDLSRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLPALELCYSMSQKFMDENQKLP 132

Query: 132 EN--PLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           EN     +S  SVS PI NWKISSPGDHPEDVKARLKYWAQAVACTVRLC+
Sbjct: 133 ENSPTTVDSCPSVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS 182

[Close]

BLAST of Csa6G041750 vs. NCBI nr
Match: gi|657960980|ref|XP_008372073.1| (PREDICTED: uncharacterized protein LOC103435452 [Malus domestica])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 109/173 (63.01%), Postives = 130/173 (75.14%), Query Frame = 1


Query: 5   ESQISPESAIEGDPEAQTLHFQSEFSS-EHDRDESVFPTY----WNNTKKNQILLEGFVE 64
           ES +S  + I  +   Q +   S  S    + DE  +P          KK Q+LLEG+VE
Sbjct: 9   ESWVSSINEIPDEQTNQLIRTSSSSSGFTQETDEXXWPKLNRLKSKKKKKKQVLLEGYVE 68

Query: 65  ASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQKFMDEH 124
           A+D+D+L+RTKSLTD+DL++LKGC+DLGF F Y+EIPELCNTLPALELCYSM+QKFMDEH
Sbjct: 69  AADDDDLSRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLPALELCYSMSQKFMDEH 128

Query: 125 QKVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 173
           QK PEN  P ++DSVS  I NWKISSPGDHPEDVK RLKYWAQAVACTV+LCN
Sbjct: 129 QKSPENS-PAAVDSVSTQIANWKISSPGDHPEDVKERLKYWAQAVACTVKLCN 180

The following BLAST results are available for this feature:

BLAST of Csa6G041750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8B9_CUCSA	1.3e-97	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041750 PE=4 SV=1	[more]
A0A103YFT0_CYNCS	1.3e-52	60.23	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013348 PE=4 ...	[more]
M5XT12_PRUPE	1.7e-52	63.37	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011892mg PE=4 SV=1	[more]
V4VT44_9ROSI	4.2e-51	61.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022453mg PE=4 SV=1	[more]
A0A067DKT5_CITSI	4.2e-51	61.24	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029447mg PE=4 SV=1	[more]

BLAST of Csa6G041750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05870.1	9.5e-47	67.15	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	1.2e-46	55.93	Protein of unknown function (DUF1685)	[more]
AT2G31560.1	2.1e-46	68.22	Protein of unknown function (DUF1685)	[more]
AT3G22690.1	1.8e-21	58.06	Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatrico...	[more]
AT5G28690.1	1.2e-17	35.29	Protein of unknown function (DUF1685)	[more]

BLAST of Csa6G041750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446235\|ref\|XP_004140877.1\|	1.9e-97	100.00	PREDICTED: uncharacterized protein LOC101222799 [Cucumis sativus]	[more]
gi\|659089841\|ref\|XP_008445710.1\|	4.1e-92	94.77	PREDICTED: uncharacterized protein LOC103488660 [Cucumis melo]	[more]
gi\|1009170882\|ref\|XP_015866437.1\|	9.8e-54	62.36	PREDICTED: uncharacterized protein LOC107404017 [Ziziphus jujuba]	[more]
gi\|645231918\|ref\|XP_008222622.1\|	8.3e-53	63.74	PREDICTED: uncharacterized protein LOC103322479 [Prunus mume]	[more]
gi\|657960980\|ref\|XP_008372073.1\|	1.1e-52	63.01	PREDICTED: uncharacterized protein LOC103435452 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU094066	cucumber EST collection version 3.0	transcribed_cluster
CU094261	cucumber EST collection version 3.0	transcribed_cluster
CU163799	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G041750.1	Csa6G041750.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU163799	CU163799	transcribed_cluster
CU094261	CU094261	transcribed_cluster
CU094066	CU094066	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 72..121 score: 6.9
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 44..172 score: 7.7
None	No IPR available	PANTHER	PTHR31865:SF0	SUBFAMILY NOT NAMED	coord: 44..172 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G041750	Cla007219	Watermelon (97103) v1	cuwmB474
Csa6G041750	MELO3C011635	Melon (DHL92) v3.5.1	cumeB476
Csa6G041750	ClCG08G004360	Watermelon (Charleston Gray)	cuwcgB502
Csa6G041750	Lsi08G003580	Bottle gourd (USVL1VR-Ls)	culsiB473
Csa6G041750	MELO3C011635.2	Melon (DHL92) v3.6.1	cumedB455
Csa6G041750	Cla97C08G147580	Watermelon (97103) v2	cuwmbB493
Csa6G041750	CSPI06G03510	Wild cucumber (PI 183967)	cpicuB314
Csa6G041750	Cucsa.365070	Cucumber (Gy14) v1	cgycuB511
Csa6G041750	CmaCh08G000760	Cucurbita maxima (Rimu)	cmacuB910
Csa6G041750	CmaCh17G005950	Cucurbita maxima (Rimu)	cmacuB373
Csa6G041750	CmoCh08G000780	Cucurbita moschata (Rifu)	cmocuB896
Csa6G041750	CmoCh17G005760	Cucurbita moschata (Rifu)	cmocuB364
Csa6G041750	Cp4.1LG12g05120	Cucurbita pepo (Zucchini)	cpecuB146
Csa6G041750	Cp4.1LG17g09750	Cucurbita pepo (Zucchini)	cpecuB332
Csa6G041750	CsGy6G003500	Cucumber (Gy14) v2	cgybcuB282
Csa6G041750	Carg04905	Silver-seed gourd	carcuB0092
Csa6G041750	Carg22609	Silver-seed gourd	carcuB0248

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G041750	Watermelon (97103) v1	cuwmB459
Csa6G041750	Watermelon (97103) v2	cuwmbB505
Csa6G041750	Wax gourd	cuwgoB590