CmaCh17G005950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G005950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	Cma_Chr17 : 4937841 .. 4938644 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCCCCCACGCGTTTACCCAAACAACCAAAATTCAAAGAAAAGAAAGAATGAGTCCGTTTTCATCTCAATTCGAATCTCAGATTTCTCCTGAATCCGCCATTGGAGGGGACCGAGAAGCTCAAATCCTCCATTTCCAATCCGAGTTCAACTCCGCTGACTATCGTGATGAGTCGGTTTCTCCGACAGACTGGAACAACACGAAAATGAAGAAGAAGACGAAGAAGAAGAACCAGATCTTGCTCGAGGGCTTTGTTGAGGATTCGGATGAGGAGAACTTAACGAGGACGAAGAGCTTGACGGACGACGATCTCGAGGAGCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGATGAAATTCCTGAGCTCTGTAATACCTTGCCGGCGCTCGAGCTCTGTTATTCGATGAGCCAGAAGTTTCTGGATGAGCACCAGAAGGTTCCGGAACATTCTCCGCCCGATTTGGCGGATTCTGTTTCCAGTCCGATTCCGAATTGGAAGATCTCTAGTCCTGGTGAGCCATTCGATTCGATTCTTAATCTCGGTATCGATTGAAAATGAGGAGTGTTTTTGAACTGTTTGTTTAGGTTGAATATGATTAAGATTGTTAACCTTTGATTTTGAAATGTTAACATTTGATTTTGAAATCATCGCTAACATTTGATTTTGAAACTGTCAACATTTGATTAAGATTGTTACCATTTGATTCGATTCAGGTGATCATCCAGAAGAAGTTAAGGCGAGGCTCAAATTTTGGGCGCAAGCGGTGGCTTGTACTGTTAGATTATGCAACTGA

mRNA sequence

TCATCCCCCACGCGTTTACCCAAACAACCAAAATTCAAAGAAAAGAAAGAATGAGTCCGTTTTCATCTCAATTCGAATCTCAGATTTCTCCTGAATCCGCCATTGGAGGGGACCGAGAAGCTCAAATCCTCCATTTCCAATCCGAGTTCAACTCCGCTGACTATCGTGATGAGTCGGTTTCTCCGACAGACTGGAACAACACGAAAATGAAGAAGAAGACGAAGAAGAAGAACCAGATCTTGCTCGAGGGCTTTGTTGAGGATTCGGATGAGGAGAACTTAACGAGGACGAAGAGCTTGACGGACGACGATCTCGAGGAGCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGATGAAATTCCTGAGCTCTGTAATACCTTGCCGGCGCTCGAGCTCTGTTATTCGATGAGCCAGAAGTTTCTGGATGAGCACCAGAAGGTTCCGGAACATTCTCCGCCCGATTTGGCGGATTCTGTTTCCAGTCCGATTCCGAATTGGAAGATCTCTAGTCCTGGTGATCATCCAGAAGAAGTTAAGGCGAGGCTCAAATTTTGGGCGCAAGCGGTGGCTTGTACTGTTAGATTATGCAACTGA

Coding sequence (CDS)

ATGAGTCCGTTTTCATCTCAATTCGAATCTCAGATTTCTCCTGAATCCGCCATTGGAGGGGACCGAGAAGCTCAAATCCTCCATTTCCAATCCGAGTTCAACTCCGCTGACTATCGTGATGAGTCGGTTTCTCCGACAGACTGGAACAACACGAAAATGAAGAAGAAGACGAAGAAGAAGAACCAGATCTTGCTCGAGGGCTTTGTTGAGGATTCGGATGAGGAGAACTTAACGAGGACGAAGAGCTTGACGGACGACGATCTCGAGGAGCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGATGAAATTCCTGAGCTCTGTAATACCTTGCCGGCGCTCGAGCTCTGTTATTCGATGAGCCAGAAGTTTCTGGATGAGCACCAGAAGGTTCCGGAACATTCTCCGCCCGATTTGGCGGATTCTGTTTCCAGTCCGATTCCGAATTGGAAGATCTCTAGTCCTGGTGATCATCCAGAAGAAGTTAAGGCGAGGCTCAAATTTTGGGCGCAAGCGGTGGCTTGTACTGTTAGATTATGCAACTGA

Protein sequence

MSPFSSQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTDWNNTKMKKKTKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQKFLDEHQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLKFWAQAVACTVRLCN

Homology

[Close]

BLAST of CmaCh17G005950 vs. TrEMBL
Match: A0A0A0K8B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041750 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.1e-77
Identity = 147/178 (82.58%), Postives = 156/178 (87.64%), Query Frame = 1


Query: 6   SQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTDWNNTKMKKKTKKKNQILL 65
           S FESQISPESAI GD EAQ LHFQSEF+S   RDESV PT WNNT       KKNQILL
Sbjct: 2   SPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNT-------KKNQILL 61

Query: 66  EGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQK 125
           EGFVE SDE+NLTRTKSLTDDDLE+LKGCVDLGFAFCYDEIPELCNTLPALELCYSM+QK
Sbjct: 62  EGFVEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQK 121

Query: 126 FLDEHQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLKFWAQAVACTVRLCN 184
           F+DEHQKVPE+  P+  DSVS PIPNWKISSPGDHPE+VKARLK+WAQAVACTVRLCN
Sbjct: 122 FMDEHQKVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 172

[Close]

BLAST of CmaCh17G005950 vs. TrEMBL
Match: M5XT12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011892mg PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-53
Identity = 104/136 (76.47%), Postives = 121/136 (88.97%), Query Frame = 1


Query: 50  NTKMKKKTKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPEL 109
           N+   KK KKKNQ+LLEG+VE +DE++L+RTKSLTD+DL+ELKGC+DLGF F Y+EIPEL
Sbjct: 57  NSLKSKKKKKKNQVLLEGYVESADEDDLSRTKSLTDEDLDELKGCLDLGFGFSYEEIPEL 116

Query: 110 CNTLPALELCYSMSQKFLDEHQKVPEHSPP--DLADSVSSPIPNWKISSPGDHPEEVKAR 169
           CNTLPALELCYSMSQKF+DE+QK PE+SP   D   SVSSPI NWKISSPGDHPE+VKAR
Sbjct: 117 CNTLPALELCYSMSQKFMDENQKSPENSPTTVDSCPSVSSPIANWKISSPGDHPEDVKAR 176

Query: 170 LKFWAQAVACTVRLCN 184
           LK+WAQAVACTVRLC+
Sbjct: 177 LKYWAQAVACTVRLCS 192

[Close]

BLAST of CmaCh17G005950 vs. TrEMBL
Match: A0A061ERL9_THECC (Signal transducer and transcription activator isoform 1 OS=Theobroma cacao GN=TCM_021559 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-52
Identity = 115/189 (60.85%), Postives = 142/189 (75.13%), Query Frame = 1


Query: 5   SSQFESQISPESAIGGDREAQ---------ILHFQSEFNSADYRDESVSPTDWNNTKMKK 64
           SSQ ES +S  ++I   +E +         +   + E+   D  D+    ++ N  K+ K
Sbjct: 5   SSQTESWVSIRNSIYQAQEEETTTAAAESFVDQERREWTKIDQDDDDDDSSN-NEDKIGK 64

Query: 65  KTKKKNQILLEGFVED-SDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLP 124
           K KKKNQ+LLEG+VE    E++LTRTKSLTD+DL+ELKGC+DLGF F Y+EIPELCNTLP
Sbjct: 65  K-KKKNQVLLEGYVEALDKEDDLTRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLP 124

Query: 125 ALELCYSMSQKFLDEHQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLKFWAQA 184
           ALELCYSMSQK+LDEHQK P+ SP   A++VSSPI NWKISSPGDHPE+VKARLKFWAQA
Sbjct: 125 ALELCYSMSQKYLDEHQKSPDPSPDTTAETVSSPIANWKISSPGDHPEDVKARLKFWAQA 184

[Close]

BLAST of CmaCh17G005950 vs. TrEMBL
Match: A0A0A0KXD6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012530 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.8e-52
Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 1


Query: 54  KKKTKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTL 113
           K+  KK++Q+LLEGFVED  E++L RTKSLTD+DL+ELKGCVDLGF F YDEIPELCNTL
Sbjct: 51  KRMMKKRSQVLLEGFVED--EDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTL 110

Query: 114 PALELCYSMSQKFLDEHQKVPEHS-----PPDLADSVSSPIPNWKISSPGDHPEEVKARL 173
           PALELCYSMSQK++D+HQK PE S     P D   SVSSPI NWKISSPGDHPE+VKARL
Sbjct: 111 PALELCYSMSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARL 170

Query: 174 KFWAQAVACTVRLCN 184
           KFWAQAVACTVRLCN
Sbjct: 171 KFWAQAVACTVRLCN 183

[Close]

BLAST of CmaCh17G005950 vs. TrEMBL
Match: F6HYQ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00130 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51
Identity = 109/187 (58.29%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MSPFSSQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTDWNNT----KMKKK 60
           M   SS+ E  +SP        +      +    + +  ++   P   + T    K KKK
Sbjct: 1   MGRLSSETEPMVSPSVFTIETADPDAKTLEKRLETLEIEEQGQWPCGLSTTNSGSKKKKK 60

Query: 61  TKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPAL 120
            KKK Q+LLEG+VE +DE++L RTKSLTD+DL+ELKGC+DLGF F Y+EIPELCNTLPAL
Sbjct: 61  QKKKKQVLLEGYVETADEDDLMRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLPAL 120

Query: 121 ELCYSMSQKFLDEHQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLKFWAQAVA 180
           ELCYSMSQKF+D+ QK PE SP   A     PI NWKISSPGDHPEEVKARLKFWAQAVA
Sbjct: 121 ELCYSMSQKFMDDQQKAPESSP--AASESPGPIANWKISSPGDHPEEVKARLKFWAQAVA 180

Query: 181 CTVRLCN 184
           CTVRLC+
Sbjct: 181 CTVRLCS 185

[Close]

BLAST of CmaCh17G005950 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685))

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47
Identity = 92/134 (68.66%), Postives = 107/134 (79.85%), Query Frame = 1


Query: 54  KKKTKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTL 113
           KK  KKK+Q+LLEG+  D D+++LTR KSLTDDDLEELKGC+DLGF F YDEIPELCNTL
Sbjct: 70  KKLEKKKSQVLLEGYALD-DQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTL 129

Query: 114 PALELCYSMSQKFLDE----HQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLK 173
           PALELCYSMSQKFLD+    H K  E        + ++PI NWKISSPGD P++VKARLK
Sbjct: 130 PALELCYSMSQKFLDDKQQNHHKSQEEDDSSPPPTTTAPIANWKISSPGDDPDDVKARLK 189

Query: 174 FWAQAVACTVRLCN 184
           +WAQ VACTVRLC+
Sbjct: 190 YWAQTVACTVRLCS 202

[Close]

BLAST of CmaCh17G005950 vs. TAIR10
Match: AT1G05870.1 (AT1G05870.1 Protein of unknown function (DUF1685))

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-46
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 54  KKKTKKKNQILLEGFVE-------DSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEI 113
           KK  +KK+Q+LLEG+VE       D  +++LTR+KSLTDDDLE+L+GC+DLGF F YDEI
Sbjct: 48  KKLERKKSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEI 107

Query: 114 PELCNTLPALELCYSMSQKFLDEHQ-KVPEHSPPDLADS----VSSPIPNWKISSPGDHP 173
           PELCNTLPALELCYSMSQKFLD+ Q K PE S  +   S     ++PI NWKISSPGD+P
Sbjct: 108 PELCNTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTATPIANWKISSPGDNP 167

Query: 174 EEVKARLKFWAQAVACTVRLCN 184
           ++VKARLK+WAQAVACTV+LC+
Sbjct: 168 DDVKARLKYWAQAVACTVQLCS 189

[Close]

BLAST of CmaCh17G005950 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 182.2 bits (461), Expect = 2.9e-46
Identity = 102/188 (54.26%), Postives = 125/188 (66.49%), Query Frame = 1


Query: 6   SQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTD------WNNTKMKKKTKK 65
           S +E+ +  +S I            S F+S  Y +      +       +  + KK  KK
Sbjct: 11  SSYEADVDSDSEIS----------TSSFSSCSYSESEEEEINNGFGVVQSKKQTKKLEKK 70

Query: 66  KNQILLEGFVEDSD-EENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALEL 125
           K+ +LLEG+V DS   ++L RTKSLTDDDLEELKGCVDLGF F Y+EIPELCNTLPALEL
Sbjct: 71  KSNVLLEGYVVDSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALEL 130

Query: 126 CYSMSQKFLDEHQKVPEHSPPD----LADSVSSPIPNWKISSPGDHPEEVKARLKFWAQA 183
           CYSMSQKF+D+       S P+    + DS  SPI +WKISSPGD+P++VKARLKFWAQA
Sbjct: 131 CYSMSQKFIDQDHHHHSSSSPEKKSSVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQA 188

[Close]

BLAST of CmaCh17G005950 vs. TAIR10
Match: AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 57/92 (61.96%), Postives = 66/92 (71.74%), Query Frame = 1


Query: 83  LTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQKFLDEHQKVPEHSPPDLA 142
           LTDDDLE LKGC+DLGF F YDEIP LC TLPALELCYSMSQK LD+     +H+P    
Sbjct: 843 LTDDDLEVLKGCLDLGFGFNYDEIPALCKTLPALELCYSMSQKNLDD-----KHTP---- 902

Query: 143 DSVSSPIPNWKISSPGDHPEEVKARLKFWAQA 175
            S+  PI    + S  D+P++VKARLK WAQA
Sbjct: 903 -SLQLPIGRSLVPS-CDNPDDVKARLKCWAQA 923

[Close]

BLAST of CmaCh17G005950 vs. TAIR10
Match: AT3G04700.1 (AT3G04700.1 Protein of unknown function (DUF1685))

HSP 1 Score: 82.8 bits (203), Expect = 2.4e-16
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1


Query: 75  ENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQKFLDEHQKVP 134
           +NL    +LTD+DL ELKG ++LGF F  +   +LCNTLPAL+L ++++++         
Sbjct: 74  DNLCIQANLTDEDLNELKGSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSS 133

Query: 135 EHSPPDLADSVSSPIP---------NWKISSPGDHPEEVKARLKFWAQAVACTV 180
             S    A + S  IP         + KI  PGD P+++K RL+ WAQAVAC+V
Sbjct: 134 SRSSSASASTFSYSIPCSPKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSV 187

[Close]

BLAST of CmaCh17G005950 vs. NCBI nr
Match: gi|449446235|ref|XP_004140877.1| (PREDICTED: uncharacterized protein LOC101222799 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 8.8e-77
Identity = 147/178 (82.58%), Postives = 156/178 (87.64%), Query Frame = 1


Query: 6   SQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTDWNNTKMKKKTKKKNQILL 65
           S FESQISPESAI GD EAQ LHFQSEF+S   RDESV PT WNNT       KKNQILL
Sbjct: 2   SPFESQISPESAIEGDPEAQTLHFQSEFSSEHDRDESVFPTYWNNT-------KKNQILL 61

Query: 66  EGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQK 125
           EGFVE SDE+NLTRTKSLTDDDLE+LKGCVDLGFAFCYDEIPELCNTLPALELCYSM+QK
Sbjct: 62  EGFVEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALELCYSMNQK 121

Query: 126 FLDEHQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLKFWAQAVACTVRLCN 184
           F+DEHQKVPE+  P+  DSVS PIPNWKISSPGDHPE+VKARLK+WAQAVACTVRLCN
Sbjct: 122 FMDEHQKVPENPLPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 172

[Close]

BLAST of CmaCh17G005950 vs. NCBI nr
Match: gi|659089841|ref|XP_008445710.1| (PREDICTED: uncharacterized protein LOC103488660 [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-75
Identity = 145/178 (81.46%), Postives = 154/178 (86.52%), Query Frame = 1


Query: 6   SQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTDWNNTKMKKKTKKKNQILL 65
           S F+SQISP SAI GD EAQ LHFQSEF+S   RDESV PT WNNT       KKNQILL
Sbjct: 2   SSFQSQISPVSAIEGDPEAQTLHFQSEFSSEHDRDESVLPTYWNNT-------KKNQILL 61

Query: 66  EGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQK 125
           EGFVE SD++NLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQK
Sbjct: 62  EGFVEASDDDNLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCYSMSQK 121

Query: 126 FLDEHQKVPEHSPPDLADSVSSPIPNWKISSPGDHPEEVKARLKFWAQAVACTVRLCN 184
           F+DEHQK PE+  P+  DSVS PIPNWKISSPGDHPE+VKARLK+WAQAVACTVRLCN
Sbjct: 122 FMDEHQKEPENPLPESVDSVSGPIPNWKISSPGDHPEDVKARLKYWAQAVACTVRLCN 172

[Close]

BLAST of CmaCh17G005950 vs. NCBI nr
Match: gi|1009170882|ref|XP_015866437.1| (PREDICTED: uncharacterized protein LOC107404017 [Ziziphus jujuba])

HSP 1 Score: 222.6 bits (566), Expect = 5.5e-55
Identity = 117/186 (62.90%), Postives = 135/186 (72.58%), Query Frame = 1


Query: 1   MSPFSSQFESQISPESAIGGDREAQILHFQSEFNSADYRDESVSPTDWNNTKMKKKTKKK 60
           M  F  + ES +   S    + + + L  QS  +S           DW   K +KK KKK
Sbjct: 1   MEVFPIESESWVFSTSPYQENPDEKTLTDQSRTSSGSSLVSQEHEEDWPRMKNEKKKKKK 60

Query: 61  NQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPELCNTLPALELCY 120
           NQ+LLE +VE +DE++LTRTKSLTD+DL+ELKGC+DLGF F YDEIPELCNTLPALELCY
Sbjct: 61  NQVLLEAYVEAADEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCY 120

Query: 121 SMSQKFLDEHQKVPEHSPPDLADS---VSSPIPNWKISSPGDHPEEVKARLKFWAQAVAC 180
           SMSQKF D+ QK PE SP   ADS   VSSPI NWKISSPGDHPE+VKARLKFWAQAVAC
Sbjct: 121 SMSQKFNDDQQKSPESSPAPTADSCSPVSSPIANWKISSPGDHPEDVKARLKFWAQAVAC 180

Query: 181 TVRLCN 184
           TVRLC+
Sbjct: 181 TVRLCS 186

[Close]

BLAST of CmaCh17G005950 vs. NCBI nr
Match: gi|645231918|ref|XP_008222622.1| (PREDICTED: uncharacterized protein LOC103322479 [Prunus mume])

HSP 1 Score: 219.5 bits (558), Expect = 4.7e-54
Identity = 105/144 (72.92%), Postives = 125/144 (86.81%), Query Frame = 1


Query: 43  VSPTDWNNTK-MKKKTKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAF 102
           +   +W   K +K K KKKNQ+LLEG+VE +DE++L+RTKSLTD+DL+ELKGC+DLGF F
Sbjct: 39  IGEEEWPKLKSLKSKKKKKNQVLLEGYVESADEDDLSRTKSLTDEDLDELKGCLDLGFGF 98

Query: 103 CYDEIPELCNTLPALELCYSMSQKFLDEHQKVPEHSPP--DLADSVSSPIPNWKISSPGD 162
            Y+EIPELCNTLPALELCYSMSQKF+DE+QK+PE+SP   D   SVSSPI NWKISSPGD
Sbjct: 99  SYEEIPELCNTLPALELCYSMSQKFMDENQKLPENSPTTVDSCPSVSSPIANWKISSPGD 158

Query: 163 HPEEVKARLKFWAQAVACTVRLCN 184
           HPE+VKARLK+WAQAVACTVRLC+
Sbjct: 159 HPEDVKARLKYWAQAVACTVRLCS 182

[Close]

BLAST of CmaCh17G005950 vs. NCBI nr
Match: gi|596192426|ref|XP_007223513.1| (hypothetical protein PRUPE_ppa011892mg [Prunus persica])

HSP 1 Score: 217.6 bits (553), Expect = 1.8e-53
Identity = 104/136 (76.47%), Postives = 121/136 (88.97%), Query Frame = 1


Query: 50  NTKMKKKTKKKNQILLEGFVEDSDEENLTRTKSLTDDDLEELKGCVDLGFAFCYDEIPEL 109
           N+   KK KKKNQ+LLEG+VE +DE++L+RTKSLTD+DL+ELKGC+DLGF F Y+EIPEL
Sbjct: 57  NSLKSKKKKKKNQVLLEGYVESADEDDLSRTKSLTDEDLDELKGCLDLGFGFSYEEIPEL 116

Query: 110 CNTLPALELCYSMSQKFLDEHQKVPEHSPP--DLADSVSSPIPNWKISSPGDHPEEVKAR 169
           CNTLPALELCYSMSQKF+DE+QK PE+SP   D   SVSSPI NWKISSPGDHPE+VKAR
Sbjct: 117 CNTLPALELCYSMSQKFMDENQKSPENSPTTVDSCPSVSSPIANWKISSPGDHPEDVKAR 176

Query: 170 LKFWAQAVACTVRLCN 184
           LK+WAQAVACTVRLC+
Sbjct: 177 LKYWAQAVACTVRLCS 192

The following BLAST results are available for this feature:

BLAST of CmaCh17G005950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G005950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8B9_CUCSA	6.1e-77	82.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041750 PE=4 SV=1	[more]
M5XT12_PRUPE	1.2e-53	76.47	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011892mg PE=4 SV=1	[more]
A0A061ERL9_THECC	4.0e-52	60.85	Signal transducer and transcription activator isoform 1 OS=Theobroma cacao GN=TC...	[more]
A0A0A0KXD6_CUCSA	6.8e-52	77.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012530 PE=4 SV=1	[more]
F6HYQ6_VITVI	1.2e-51	58.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00130 PE=4 SV=...	[more]

BLAST of CmaCh17G005950 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31560.1	1.5e-47	68.66	Protein of unknown function (DUF1685)	[more]
AT1G05870.1	1.7e-46	65.49	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	2.9e-46	54.26	Protein of unknown function (DUF1685)	[more]
AT3G22690.1	1.3e-22	61.96	Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatrico...	[more]
AT3G04700.1	2.4e-16	40.35	Protein of unknown function (DUF1685)	[more]

BLAST of CmaCh17G005950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446235\|ref\|XP_004140877.1\|	8.8e-77	82.58	PREDICTED: uncharacterized protein LOC101222799 [Cucumis sativus]	[more]
gi\|659089841\|ref\|XP_008445710.1\|	1.7e-75	81.46	PREDICTED: uncharacterized protein LOC103488660 [Cucumis melo]	[more]
gi\|1009170882\|ref\|XP_015866437.1\|	5.5e-55	62.90	PREDICTED: uncharacterized protein LOC107404017 [Ziziphus jujuba]	[more]
gi\|645231918\|ref\|XP_008222622.1\|	4.7e-54	72.92	PREDICTED: uncharacterized protein LOC103322479 [Prunus mume]	[more]
gi\|596192426\|ref\|XP_007223513.1\|	1.8e-53	76.47	hypothetical protein PRUPE_ppa011892mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005950.1	CmaCh17G005950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 83..135 score: 3.1
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 53..183 score: 4.0
None	No IPR available	PANTHER	PTHR31865:SF0	SUBFAMILY NOT NAMED	coord: 53..183 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G005950	Cucsa.365070	Cucumber (Gy14) v1	cgycmaB1000
CmaCh17G005950	Cla007219	Watermelon (97103) v1	cmawmB337
CmaCh17G005950	Csa6G041750	Cucumber (Chinese Long) v2	cmacuB373
CmaCh17G005950	MELO3C011635	Melon (DHL92) v3.5.1	cmameB330
CmaCh17G005950	ClCG08G004360	Watermelon (Charleston Gray)	cmawcgB335
CmaCh17G005950	CSPI06G03510	Wild cucumber (PI 183967)	cmacpiB377
CmaCh17G005950	CmoCh08G000780	Cucurbita moschata (Rifu)	cmacmoB378
CmaCh17G005950	CmoCh17G005760	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G005950	Lsi08G003580	Bottle gourd (USVL1VR-Ls)	cmalsiB362
CmaCh17G005950	Cp4.1LG12g05120	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G005950	Cp4.1LG17g09750	Cucurbita pepo (Zucchini)	cmacpeB390
CmaCh17G005950	MELO3C011635.2	Melon (DHL92) v3.6.1	cmamedB384
CmaCh17G005950	CsaV3_6G003800	Cucumber (Chinese Long) v3	cmacucB0443
CmaCh17G005950	Cla97C08G147580	Watermelon (97103) v2	cmawmbB385
CmaCh17G005950	CsGy6G003500	Cucumber (Gy14) v2	cgybcmaB757
CmaCh17G005950	Carg22609	Silver-seed gourd	carcmaB0302
CmaCh17G005950	Carg04905	Silver-seed gourd	carcmaB0109

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G005950	CmaCh08G000760	Cucurbita maxima (Rimu)	cmacmaB386

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G005950	Wax gourd	cmawgoB0484