CSPI06G03510 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCCCTTCGAATCTCAGATTTCTCCTGAATCCGCCATTGAAGGGGACCCAGAAGCTCAAACCCTCCATTTCCAATCTGAATTCAGCTCTGAACACGATCGCGACGAGTCAGTTTTTCCTACCTACTGGAACAACACCAAGAAGAACCAGATCTTGCTCGAGGGTTTTGTCGAGGCTTCGGATGAGGATAATTTGACTAGAACAAAAAGCTTAACAGATGACGATCTCGAGGATCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGACGAGATTCCTGAGCTTTGTAACACCTTGCCGGCCCTCGAACTCTGTTATTCCATGAACCAGAAGTTTATGGATGAACACCAAAAGGTTCCGGAAAATCCTTTACCCGAGTCGATGGATTCTGTTTCCGGTCCCATTCCGAATTGGAAGATCTCTAGTCCTGGTAAGCCGTTCGGTTCAATTCTTAATCTCAATATCGCTTGTAAAATTGAAAAGGAATTTCTCTTTGTGTGGTTAACTGTTCTTCAGTTTATGAACTGTTTGTTTAGGTTGAGTATGATTCAGTTTGAAATTGTTCTATGTTCAGGTGATCATCCAGAAGATGTTAAGGCCAGGCTCAAATACTGGGCGCAAGCAGTGGCTTGTACTGTCAGATTATGCAACTGA ATGAGTCCCTTCGAATCTCAGATTTCTCCTGAATCCGCCATTGAAGGGGACCCAGAAGCTCAAACCCTCCATTTCCAATCTGAATTCAGCTCTGAACACGATCGCGACGAGTCAGTTTTTCCTACCTACTGGAACAACACCAAGAAGAACCAGATCTTGCTCGAGGGTTTTGTCGAGGCTTCGGATGAGGATAATTTGACTAGAACAAAAAGCTTAACAGATGACGATCTCGAGGATCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGACGAGATTCCTGAGCTTTGTAACACCTTGCCGGCCCTCGAACTCTGTTATTCCATGAACCAGAAGTTTATGGATGAACACCAAAAGGTTCCGGAAAATCCTTTACCCGAGTCGATGGATTCTGTTTCCGGTCCCATTCCGAATTGGAAGATCTCTAGTCCTGGTGATCATCCAGAAGATGTTAAGGCCAGGCTCAAATACTGGGCGCAAGCAGTGGCTTGTACTGTCAGATTATGCAACTGA ATGAGTCCCTTCGAATCTCAGATTTCTCCTGAATCCGCCATTGAAGGGGACCCAGAAGCTCAAACCCTCCATTTCCAATCTGAATTCAGCTCTGAACACGATCGCGACGAGTCAGTTTTTCCTACCTACTGGAACAACACCAAGAAGAACCAGATCTTGCTCGAGGGTTTTGTCGAGGCTTCGGATGAGGATAATTTGACTAGAACAAAAAGCTTAACAGATGACGATCTCGAGGATCTCAAAGGATGTGTGGATCTAGGGTTTGCGTTTTGCTATGACGAGATTCCTGAGCTTTGTAACACCTTGCCGGCCCTCGAACTCTGTTATTCCATGAACCAGAAGTTTATGGATGAACACCAAAAGGTTCCGGAAAATCCTTTACCCGAGTCGATGGATTCTGTTTCCGGTCCCATTCCGAATTGGAAGATCTCTAGTCCTGGTGATCATCCAGAAGATGTTAAGGCCAGGCTCAAATACTGGGCGCAAGCAGTGGCTTGTACTGTCAGATTATGCAACTGA
BLAST of CSPI06G03510 vs. TrEMBL
Match: A0A0A0K8B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041750 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 6.6e-97 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of CSPI06G03510 vs. TrEMBL
Match: M5XT12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011892mg PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 6.4e-52 Identity = 109/172 (63.37%), Postives = 130/172 (75.58%), Query Frame = 1
BLAST of CSPI06G03510 vs. TrEMBL
Match: A0A103YFT0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013348 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 6.4e-52 Identity = 103/171 (60.23%), Postives = 123/171 (71.93%), Query Frame = 1
BLAST of CSPI06G03510 vs. TrEMBL
Match: A0A067DKT5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029447mg PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.7e-50 Identity = 109/178 (61.24%), Postives = 128/178 (71.91%), Query Frame = 1
BLAST of CSPI06G03510 vs. TrEMBL
Match: V4VT44_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022453mg PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.7e-50 Identity = 109/178 (61.24%), Postives = 128/178 (71.91%), Query Frame = 1
BLAST of CSPI06G03510 vs. TAIR10
Match: AT1G05870.1 (AT1G05870.1 Protein of unknown function (DUF1685)) HSP 1 Score: 184.5 bits (467), Expect = 5.6e-47 Identity = 92/137 (67.15%), Postives = 109/137 (79.56%), Query Frame = 1
BLAST of CSPI06G03510 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685)) HSP 1 Score: 183.3 bits (464), Expect = 1.2e-46 Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 1
BLAST of CSPI06G03510 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685)) HSP 1 Score: 180.6 bits (457), Expect = 8.0e-46 Identity = 99/177 (55.93%), Postives = 122/177 (68.93%), Query Frame = 1
BLAST of CSPI06G03510 vs. TAIR10
Match: AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885)) HSP 1 Score: 100.1 bits (248), Expect = 1.4e-21 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1
BLAST of CSPI06G03510 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685)) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 1
BLAST of CSPI06G03510 vs. NCBI nr
Match: gi|449446235|ref|XP_004140877.1| (PREDICTED: uncharacterized protein LOC101222799 [Cucumis sativus]) HSP 1 Score: 361.3 bits (926), Expect = 9.4e-97 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of CSPI06G03510 vs. NCBI nr
Match: gi|659089841|ref|XP_008445710.1| (PREDICTED: uncharacterized protein LOC103488660 [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 2.0e-91 Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 1
BLAST of CSPI06G03510 vs. NCBI nr
Match: gi|1009170882|ref|XP_015866437.1| (PREDICTED: uncharacterized protein LOC107404017 [Ziziphus jujuba]) HSP 1 Score: 216.1 bits (549), Expect = 4.9e-53 Identity = 111/178 (62.36%), Postives = 131/178 (73.60%), Query Frame = 1
BLAST of CSPI06G03510 vs. NCBI nr
Match: gi|645231918|ref|XP_008222622.1| (PREDICTED: uncharacterized protein LOC103322479 [Prunus mume]) HSP 1 Score: 213.4 bits (542), Expect = 3.2e-52 Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 1
BLAST of CSPI06G03510 vs. NCBI nr
Match: gi|657960980|ref|XP_008372073.1| (PREDICTED: uncharacterized protein LOC103435452 [Malus domestica]) HSP 1 Score: 212.2 bits (539), Expect = 7.1e-52 Identity = 109/173 (63.01%), Postives = 130/173 (75.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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