Csa6G011730 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G011730
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ethylene-responsive transcription factor; contains IPR016177 (DNA-binding, integrase-type)
Location	Chr6 : 1313904 .. 1314821 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

mRNA sequence

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Coding sequence (CDS)

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Protein sequence

MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFFDF*

Homology

[Close]

BLAST of Csa6G011730 vs. Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 95/143 (66.43%), Postives = 116/143 (81.12%), Query Frame = 1


Query: 23  HSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAE 82
           H+    ++ + + +NP   S  +++ ++  RKRKGKGGPDN+KFRYRGVRQRSWGKWVAE
Sbjct: 10  HNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAE 69

Query: 83  IREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSS 142
           IREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL  +SP++  SSS+S S++S
Sbjct: 70  IREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAAS 129

Query: 143 SSSRSSSST-SLRPLLPRPALSS 165
           S S SSSST +LRPLLPRPA ++
Sbjct: 130 SPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of Csa6G011730 vs. Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 62/171 (36.26%), Postives = 76/171 (44.44%), Query Frame = 1


Query: 47  NNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREP-RKRTRKWLGTFSTAEDAAR 106
           N +    + + K G D  +  YRGVR+R WGK+ AEIR+  R   R WLGTF  AE+AA 
Sbjct: 66  NGDVSNSEEEEKVGIDEER-SYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAAL 125

Query: 107 AYDRAAIILYGSRAQLNL------------------QSTSP-----------NNNYSSSN 166
           AYD+AA    GS A LN                      SP           N       
Sbjct: 126 AYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKR 185

Query: 167 SSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTAI 188
           SSSSSSSSS SSS +S          SS+ S +S +SS   +   +S T +
Sbjct: 186 SSSSSSSSSNSSSCSS----------SSSTSSTSRSSSKQSVVKQESGTLV 225

[Close]

BLAST of Csa6G011730 vs. Swiss-Prot
Match: TPRXL_HUMAN (Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 1


Query: 113 ILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSST--FSFSS 172
           IL  S    +  S+SP++++SSS+ SSS SSSS SSSS++  P     + SS+   S +S
Sbjct: 50  ILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNS 109

Query: 173 MASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTP- 232
            +SS    PS  S ++   P  S   P+   +   +  +   +    +SS+++ ++S+P 
Sbjct: 110 SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPS 169

Query: 233 ---PISTIATPSSPTTSYSQNPNNPTLLLSSPLP----PLPSDLILGPIGPSSPAVGWPS 283
              P S+ ++PSS  +S S + ++P+   SSP P    P  S         SSP+   PS
Sbjct: 170 SSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPS 229

HSP 2 Score: 61.2 bits (147), Expect = 2.2e-08
Identity = 73/259 (28.19%), Postives = 115/259 (44.40%), Query Frame = 1


Query: 6   SPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNK 65
           S SSSS  +L        SS   SS  PSSS+ S SSP+++++++          P ++ 
Sbjct: 37  SSSSSSRSIL--------SSSILSSSIPSSSS-SSSSPSSSHSSSSPSSSHSSSSPSSSS 96

Query: 66  FRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQS 125
                                           ST+  ++ +   ++     S +  +  S
Sbjct: 97  --------------------------------STSSPSSSSSSSSSSSPSSSNSSSSSSS 156

Query: 126 TSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFT 185
           +SP+++ SSS+SS SSSSSS SSSS+S     P  + SS  S SS +SS    PS  S +
Sbjct: 157 SSPSSSSSSSSSSPSSSSSSPSSSSSS-SSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPS 216

Query: 186 AIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYS 245
           +    P S        N  P+  +  P+    +SS++    S+ P S+ ++ SSP+TS  
Sbjct: 217 SSGSSPSS-------SNSSPSSSSSSPS----SSSSSPSPRSSSPSSSSSSTSSPSTS-- 239

Query: 246 QNPNNPTLLLSSPLPPLPS 265
            +P++ +   SSP    PS
Sbjct: 277 -SPSSSSPSSSSPSSSCPS 239

HSP 3 Score: 33.9 bits (76), Expect = 3.8e+00
Identity = 42/161 (26.09%), Postives = 61/161 (37.89%), Query Frame = 1


Query: 6   SPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNK 65
           SPSSSSS           SSPS SS SPSSS+ S SS +++ +++            N+ 
Sbjct: 135 SPSSSSSS--------SSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSS 194

Query: 66  FRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQS 125
                    S     +    P  R+     + S+                         S
Sbjct: 195 ------PSSSSSSPSSSSSSPSPRSSSPSSSSSST------------------------S 254

Query: 126 TSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTF 167
           +   ++ SSS+ SSSS SSS  S++   RP  P+ +  + F
Sbjct: 255 SPSTSSPSSSSPSSSSPSSSCPSAALGRRPQSPQSSHCAPF 257

[Close]

BLAST of Csa6G011730 vs. Swiss-Prot
Match: PI3K2_DICDI (Phosphatidylinositol 3-kinase 2 OS=Dictyostelium discoideum GN=pikB PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-07
Identity = 75/259 (28.96%), Postives = 106/259 (40.93%), Query Frame = 1


Query: 24  SSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGK--WVA 83
           SSP PSS S SSSN  D   NNNNNNN +      GG        R +  +S  K   V 
Sbjct: 241 SSPPPSSSSSSSSN--DEQFNNNNNNNNS----NSGGSS------RMITSKSQIKPLIVT 300

Query: 84  EIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYG-----------------SRAQLNLQ 143
                   T     T +      R       +L+                  S     + 
Sbjct: 301 SNTAATTTTTTTTNTSAPTTPTNRVQSSLDDLLFNLPTIPSNVPTVNGGPKISAVPKKVS 360

Query: 144 STS----PNNNYSSSNSSSSSSSSSRSSSSTSLR--PLLPRPALSSTFSFSSMASSLPLM 203
           S+     P++N SSS++ + S SSS  SSS+S     ++P   LSS+ S +S ++SLP  
Sbjct: 361 SSKLLIPPSSNVSSSSNITLSLSSSSPSSSSSSSTSTVVPIVQLSSSNSTNSPSTSLPTT 420

Query: 204 PSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPS 258
           P            P+  Y  L+    P+Q  Q PT    +S+T T T S    S+ ++ S
Sbjct: 421 PRLSQ--------PTTSYTQLI----PSQQQQQPTESNSSSNTNTTTTS----SSSSSSS 471

HSP 2 Score: 47.0 bits (110), Expect = 4.3e-04
Identity = 62/261 (23.75%), Postives = 102/261 (39.08%), Query Frame = 1


Query: 24  SSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEI 83
           SS S SS + ++ +P+ +S NNNNNNN           +NN          +        
Sbjct: 166 SSSSSSSTTATTPSPTTTSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-------- 225

Query: 84  REPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPN----NNYSSSNSSS 143
                       T +T           +I++  S    +  S+S N    NN +++N+S+
Sbjct: 226 NNNNNNNNNTTSTTTTT---------TSILISSSPPPSSSSSSSSNDEQFNNNNNNNNSN 285

Query: 144 SSSSSSRSSSSTSLRPLL-PRPALSSTFSFSSMASSLPLMPSPQSFTAIYPPPPSLIYPN 203
           S  SS   +S + ++PL+      ++T + ++  +S P  P+ +  +++          +
Sbjct: 286 SGGSSRMITSKSQIKPLIVTSNTAATTTTTTTTNTSAPTTPTNRVQSSL---------DD 345

Query: 204 LLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSS------PTTSYSQNPNNPT 263
           LL N         PT   I S+  TV N  P IS +    S      P +S   + +N T
Sbjct: 346 LLFNL--------PT---IPSNVPTV-NGGPKISAVPKKVSSSKLLIPPSSNVSSSSNIT 388

Query: 264 LLLSSPLPPLPSDLILGPIGP 274
           L LSS  P   S      + P
Sbjct: 406 LSLSSSSPSSSSSSSTSTVVP 388

HSP 3 Score: 40.4 bits (93), Expect = 4.1e-02
Identity = 45/157 (28.66%), Postives = 71/157 (45.22%), Query Frame = 1


Query: 124 QSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q   P  + SSSN++++++SSS SSSS+SL    P+P+ +S    +   SS     S   
Sbjct: 426 QQQQPTESNSSSNTNTTTTSSSSSSSSSSLTISSPQPSNNSIRISAFGRSSTQFTISSNG 485

Query: 184 FTAIYPPPPSLIYPNL--LHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPT 243
             +      +  Y N+  L N    +V ++  + ++  S  T+ + +         SSP 
Sbjct: 486 IPSSPGQVSNKDYNNIGNLSNSSGERV-KNKQYSMLNISKKTILDESD------ISSSPR 545

Query: 244 TSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAV 279
           +  S  PN+    +SS LPP  S +  G  G S P V
Sbjct: 546 SIGS--PNSIRASISSQLPPSLSSIGGGGGGGSGPNV 573

HSP 4 Score: 31.6 bits (70), Expect = 1.9e+01
Identity = 13/42 (30.95%), Postives = 21/42 (50.00%), Query Frame = 1


Query: 22   DHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDN 64
            D +  +  S S +++N ++++ NNNNNNN         G +N
Sbjct: 1004 DSNKENKDSSSNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNN 1045

HSP 5 Score: 30.8 bits (68), Expect = 3.2e+01
Identity = 13/43 (30.23%), Postives = 24/43 (55.81%), Query Frame = 1


Query: 22   DHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNN 65
            D SS + ++ + +++N ++++ NNNNNNN      G    +N+
Sbjct: 1011 DSSSNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNGNNSNNNS 1053

[Close]

BLAST of Csa6G011730 vs. Swiss-Prot
Match: YH5D_SCHPO (Uncharacterized serine-rich protein C215.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC215.13 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.5e-07
Identity = 69/269 (25.65%), Postives = 112/269 (41.64%), Query Frame = 1


Query: 6   SPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNK 65
           S SS+SS L         SS S SS   SSS+ S SSP + ++   +           + 
Sbjct: 246 SSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTS- 305

Query: 66  FRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQS 125
                          + I      +  +  T S++  ++ +   ++     S + ++  S
Sbjct: 306 ---------------STISSSSSSSSSFSSTLSSSSMSSSSSFSSSPT--SSSSTISSSS 365

Query: 126 TSPNNNY-----SSSNSSSSSSSSSRSSSSTSLRPLLPRPALSS-TFSFSSMASSLPLMP 185
           +SP+++      SSS SSSS SS+  SSSSTS   L    + SS   S SS +SSL    
Sbjct: 366 SSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHK 425

Query: 186 SPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQH-------------PTHEIITSSTTTVTN 245
           S  S  +   P  S  Y N   ++  +  + H              +  ++TSS+ T   
Sbjct: 426 SSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSHTYER 485

Query: 246 STPPISTIATPSSPTTSYSQNPNNPTLLL 256
           ST  + T+ T SS +++Y+      ++LL
Sbjct: 486 STVYVVTVETVSSGSSTYASQSTQTSILL 496

HSP 2 Score: 54.3 bits (129), Expect = 2.7e-06
Identity = 77/271 (28.41%), Postives = 115/271 (42.44%), Query Frame = 1


Query: 9   SSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRY 68
           S SS  L    PL  S+ S  S S SSS PS SS +++  ++ A        P +    Y
Sbjct: 158 SISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAA--------PTSTSSSY 217

Query: 69  RGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSP 128
                 S    V+    P   +   L + S +  +  +   ++     S    +L S+S 
Sbjct: 218 L-----SSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSS-----SSTSSSLSSSSS 277

Query: 129 NNNYSSSNSSSS--SSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTA 188
           ++  SSS+SSSS  SSSSS SSS TS          SST S SS +SS    P+  S T 
Sbjct: 278 SSTASSSSSSSSIISSSSSSSSSPTS---------TSSTISSSSSSSS---SPTSTSSTI 337

Query: 189 IYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYSQ 248
                 S  + + L +   +  +   +    +SST + ++S+P  S+     S TTS S+
Sbjct: 338 SSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSF----SSTTSSSK 394

Query: 249 NPNNPTLLLSSPLPPLPSDLILGPIGPSSPA 278
           + ++ +  +SS      S L       S PA
Sbjct: 398 SSSSFSSTVSSSSSTSSSTLTSSSSSSSRPA 394

HSP 3 Score: 43.9 bits (102), Expect = 3.7e-03
Identity = 65/263 (24.71%), Postives = 104/263 (39.54%), Query Frame = 1


Query: 6   SPSSSSSHLLPQPKPLDHSSPSPSSPSPS--SSNPSDSSPNNNNNNNGARKRKGKGGPDN 65
           SPSSSSS  L        S PS SS S S  SS  S SS +  ++++ +          +
Sbjct: 221 SPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSS 280

Query: 66  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRA-AIILYGSRAQLN 125
           +          S    ++              T S++  ++ ++    +     S +  +
Sbjct: 281 SS-------PTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFS 340

Query: 126 LQSTSPNNNYSSSNSS------SSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP 185
              TS ++  SSS+SS      SS++SSS+SSSS S          SST + SS +SS P
Sbjct: 341 SSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRP 400

Query: 186 LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT 245
              S  S                      + ++ H +     SS+  V+++    ST + 
Sbjct: 401 ASSSSHS----------------------SSLSSHKSSSSSKSSSAPVSSAFYHNSTSSR 454

Query: 246 PSSPTTSYSQN--PNNPTLLLSS 258
            SS ++S+S +   + P L  SS
Sbjct: 461 SSSHSSSHSLSSLSSKPILTASS 454

HSP 4 Score: 41.6 bits (96), Expect = 1.8e-02
Identity = 69/296 (23.31%), Postives = 112/296 (37.84%), Query Frame = 1


Query: 3   PDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPD 62
           P  S +SSS+     P     S  S SS   SSS+PS SS +   +++ +          
Sbjct: 187 PSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSS------- 246

Query: 63  NNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLN 122
                            +         T   L + S++  A+ +   ++II   S +  +
Sbjct: 247 -----------------IPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS 306

Query: 123 LQSTSPNNNYSSSNSSSS---------------------SSSSSRSSSSTSLRPLLPRPA 182
             STS   + SSS+SSS                      SSSS  SSSS S  P      
Sbjct: 307 PTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSST 366

Query: 183 LSSTF---SFSSMASSLPLMPSPQSFTAIYPPPPSLIYPNLL----HNQYPAQVTQHPTH 242
           +SS+    S SS +S+     S  SF++      S     L      +  PA  + H + 
Sbjct: 367 ISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSS 426

Query: 243 EIITSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTL--LLSSPLPPLPSDLIL 269
                S+++  +S+ P+S+    +S ++  S + ++ +L  L S P+    S  +L
Sbjct: 427 LSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLL 458

[Close]

BLAST of Csa6G011730 vs. TrEMBL
Match: A0A0A0KBN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011730 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 1.1e-176
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60

Query: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120
           PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ
Sbjct: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120

Query: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180
           LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS
Sbjct: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180

Query: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240
           PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP
Sbjct: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240

Query: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300
           TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP
Sbjct: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300

Query: 301 FFFDF 306
           FFFDF
Sbjct: 301 FFFDF 305

[Close]

BLAST of Csa6G011730 vs. TrEMBL
Match: K7KAX0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G264700 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.0e-57
Identity = 152/345 (44.06%), Postives = 191/345 (55.36%), Query Frame = 1


Query: 14  LLPQPKPLDHSSPSPSSPSPS------SSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFR 73
           LLPQP+    ++ + +  +PS      S+N S SS NNNN+++ +RK KGKGGPDNNKFR
Sbjct: 4   LLPQPQETKPTATTATETTPSETSITASANKSSSS-NNNNSSSNSRKCKGKGGPDNNKFR 63

Query: 74  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTS 133
           YRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ   
Sbjct: 64  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQ--- 123

Query: 134 PNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTAI 193
                 S +SS SSSS S SSS+ +LRPLLPRP+   TF+F   ++    +P P + +  
Sbjct: 124 -----PSGSSSQSSSSRSSSSSTQTLRPLLPRPS-GFTFNFPFNSAPATTVPYPYNNSHN 183

Query: 194 YPPPPSLIYP---NLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPI-------STIATP 253
           Y   P ++YP   +  HN    QV  HP H         V +S   +       + +   
Sbjct: 184 YTYTPPVLYPIDNSKNHNINTVQV-HHPHHYRCPEEVVQVPHSESDLGGLGGNNNIVVDG 243

Query: 254 SSPTTSYSQ-------NPNNPTL-----------------------LLSSPLPPLPSDLI 305
           S  +TSY +       N NN  +                       + SS +  + S + 
Sbjct: 244 SIRSTSYQRHGFLDNINNNNNHVHVQVQHGVFSNQQQQHQNSVVEGVNSSVVGSVSSSMD 303

[Close]

BLAST of Csa6G011730 vs. TrEMBL
Match: A0A061FK92_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_042471 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.3e-57
Identity = 159/346 (45.95%), Postives = 201/346 (58.09%), Query Frame = 1


Query: 2   DPDHSPSSSSSHLLPQP---KPLDHSSPSPSSPSPSSSN------PSDSSPNNNNNNNGA 61
           D D SP S      PQ    K    ++ SP   + SS +      P+ + P ++     +
Sbjct: 4   DQDQSPLSHP----PQETTAKTTTTTTTSPDQDTKSSESESVIISPNTNPPGSSCTTTTS 63

Query: 62  RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAI 121
           RK KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAI
Sbjct: 64  RKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAI 123

Query: 122 ILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSST-SLRPLLPRPALSSTFSFSSM 181
           ILYGS+AQLNLQ   P+ + SSS+S+SSS   S SSSST +LRPLLPRP   S F+FS  
Sbjct: 124 ILYGSKAQLNLQ---PSVSSSSSSSASSSRGGSSSSSSTQTLRPLLPRP---SGFAFSFA 183

Query: 182 ASSLPLMPSPQSFTA-----------IYPP--PPSLIYPNLLHN-QYPAQVTQHPTHEII 241
           +SS P +  P S  A           +YP    P+ +YPN++ N Q   Q+ Q       
Sbjct: 184 SSSNP-VTHPASLIAGGSSSKFMPYGVYPNLLGPAALYPNIVQNPQQALQIVQQ------ 243

Query: 242 TSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLL--LSSPLPPLPSDLILG------ 301
            +  + V N   P  T+ + ++P    +Q  +  +L   ++S +  + S L L       
Sbjct: 244 -TEPSLVVNPGDPTGTLTSYTNPNPQQTQQHHQGSLYEDINSLVGSVGSSLSLSAQTSVA 303

Query: 302 --------PIGPSSPAVGWPSLDVNDDDYLPS-LWDYHDP-FFFDF 306
                    +GP SP+V WP    NDDDY P+ +WDY DP FFFDF
Sbjct: 304 PAVPDPGLTVGPGSPSV-WPL--TNDDDYPPACIWDYGDPNFFFDF 328

[Close]

BLAST of Csa6G011730 vs. TrEMBL
Match: B9P4N2_SOYBN (SGR OS=Glycine max PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56
Identity = 151/345 (43.77%), Postives = 191/345 (55.36%), Query Frame = 1


Query: 14  LLPQPKPLDHSSPSPSSPSPS------SSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFR 73
           LLPQP+    ++ + +  +PS      S+N S SS NNNN+++ +RK +GKGGPDNNKFR
Sbjct: 4   LLPQPQETKPTATTATETTPSETSITASANKSSSS-NNNNSSSNSRKCEGKGGPDNNKFR 63

Query: 74  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTS 133
           YRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ   
Sbjct: 64  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQ--- 123

Query: 134 PNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTAI 193
                 S +SS SSSS S SSS+ +LRPLLPRP+   TF+F   ++    +P P + +  
Sbjct: 124 -----PSGSSSQSSSSRSSSSSTQTLRPLLPRPS-GFTFNFPFNSAPATTVPYPYNNSHN 183

Query: 194 YPPPPSLIYP---NLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPI-------STIATP 253
           Y   P ++YP   +  HN    QV  HP H         V +S   +       + +   
Sbjct: 184 YTYTPPVLYPIDNSKNHNINTVQV-HHPHHYRCPEEVVQVPHSESDLGGLGGNNNIVVDG 243

Query: 254 SSPTTSYSQ-------NPNNPTL-----------------------LLSSPLPPLPSDLI 305
           S  +TSY +       N NN  +                       + SS +  + S + 
Sbjct: 244 SIRSTSYQRHGFLDNINNNNNHVHVQVQHGVFSNQQQQHQNSVVEGVNSSVVGSVSSSMD 303

[Close]

BLAST of Csa6G011730 vs. TrEMBL
Match: V4V9W4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033578mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-56
Identity = 147/331 (44.41%), Postives = 191/331 (57.70%), Query Frame = 1


Query: 22  DHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVA 81
           +++  + SS   +S N  ++S NNNNNNN  +K KGKGGPDN+KFRYRGVRQRSWGKWVA
Sbjct: 19  NNTKSTDSSTITTSDNTCNNSSNNNNNNNNNKKCKGKGGPDNSKFRYRGVRQRSWGKWVA 78

Query: 82  EIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSS--- 141
           EIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ ++ +++  SSNS+   
Sbjct: 79  EIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSTSSSSSHSSNSTRGG 138

Query: 142 SSSSSSSRSSSSTSLRPLLPRP-ALSSTFSFSS--------MASSLPLMPSPQSFTAIYP 201
               SSS +SS  +LRPLLPRP     TFS SS        ++SS  L+P    +  I  
Sbjct: 139 GGGGSSSSNSSQQTLRPLLPRPTGFGFTFSASSANPAAGAGLSSSSGLVPY-GVYPNIMS 198

Query: 202 PPPSLIYPNLLH--------NQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPT 261
              +L+ PN++          Q   ++  +  H +         NS   I+     ++ T
Sbjct: 199 VSSALLCPNIVQVQNQRDMMMQQQCEIQNYHHHHLQIQQVPDGLNSVSCINDTLAAAAST 258

Query: 262 TSYSQNPNN---------------------PTLLLSSPL---PPLPSDLILGP---IGPS 305
           +SY  NPN+                      TL LS+ +   PP  +     P   +GP 
Sbjct: 259 SSYG-NPNHQQQYEQNCLYHDISSIAGSMGSTLSLSTQVAHAPPAEAAAAPNPNMSVGPG 318

[Close]

BLAST of Csa6G011730 vs. TAIR10
Match: AT2G40220.1 (AT2G40220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-48
Identity = 95/143 (66.43%), Postives = 116/143 (81.12%), Query Frame = 1


Query: 23  HSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAE 82
           H+    ++ + + +NP   S  +++ ++  RKRKGKGGPDN+KFRYRGVRQRSWGKWVAE
Sbjct: 10  HNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAE 69

Query: 83  IREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSS 142
           IREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL  +SP++  SSS+S S++S
Sbjct: 70  IREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAAS 129

Query: 143 SSSRSSSST-SLRPLLPRPALSS 165
           S S SSSST +LRPLLPRPA ++
Sbjct: 130 SPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of Csa6G011730 vs. TAIR10
Match: AT3G57600.1 (AT3G57600.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 53/82 (64.63%), Postives = 59/82 (71.95%), Query Frame = 1


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 116 GSRAQLNLQSTSPNNNYSSSNS 138
           G  A LNL     N   S SNS
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of Csa6G011730 vs. TAIR10
Match: AT3G11020.1 (AT3G11020.1 DRE/CRT-binding protein 2B)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-23
Identity = 56/108 (51.85%), Postives = 68/108 (62.96%), Query Frame = 1


Query: 34  SSSNPSDSSPNNNNNNNGARK--RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTR 93
           +S+      P       G++K   KGKGGPDN+   +RGVRQR WGKWVAEIREP+  TR
Sbjct: 42  ASAVKEGEKPKRKVPAKGSKKGCMKGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIGTR 101

Query: 94  KWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSS 140
            WLGTF TAE AA AYD AA  +YGS A+LN    S  + ++S++S S
Sbjct: 102 LWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQ-SVGSEFTSTSSQS 148

[Close]

BLAST of Csa6G011730 vs. TAIR10
Match: AT1G75490.1 (AT1G75490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 7.6e-23
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 1


Query: 56  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 115
           +GKGGPDN    Y+GVRQR+WGKWVAEIREP +  R WLGTF T+ +AA AYD AA  LY
Sbjct: 30  RGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLY 89

Query: 116 GSRAQLNLQS---TSPNNNYSSSNSSSSSSSSSRSSSSTSLRP 156
           G  A LNL     + P    S ++ ++ SS++   SSS S  P
Sbjct: 90  GPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESP 132

[Close]

BLAST of Csa6G011730 vs. TAIR10
Match: AT5G18450.1 (AT5G18450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 57/110 (51.82%), Postives = 65/110 (59.09%), Query Frame = 1


Query: 40  DSSPNNNNNNNGARK--RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF 99
           +  P    N   +RK   KGKGGP+N    +RGVRQR+WGKWVAEIREP + TR WLGTF
Sbjct: 4   EQPPAKKRNMGRSRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTF 63

Query: 100 STAEDAARAYDRAAIILYGSRAQLNL------QSTSPNNNYSSSNSSSSS 142
           +T+ +AA AYD AA  LYG  A+LNL      Q    N N S S   S S
Sbjct: 64  NTSVEAAMAYDEAAKKLYGHEAKLNLVHPQQQQQVVVNRNLSFSGHGSGS 113

[Close]

BLAST of Csa6G011730 vs. NCBI nr
Match: gi|449441582|ref|XP_004138561.1| (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis sativus])

HSP 1 Score: 627.1 bits (1616), Expect = 1.6e-176
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGG 60

Query: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120
           PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ
Sbjct: 61  PDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQ 120

Query: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180
           LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS
Sbjct: 121 LNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 180

Query: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240
           PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP
Sbjct: 181 PQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSP 240

Query: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300
           TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP
Sbjct: 241 TTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDP 300

Query: 301 FFFDF 306
           FFFDF
Sbjct: 301 FFFDF 305

[Close]

BLAST of Csa6G011730 vs. NCBI nr
Match: gi|659082050|ref|XP_008441640.1| (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo])

HSP 1 Score: 589.3 bits (1518), Expect = 3.8e-165
Identity = 293/311 (94.21%), Postives = 297/311 (95.50%), Query Frame = 1


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNN------NNGARK 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPS  SPSPSSSNPSDSSPNNNNN      NNGARK
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPS--SPSPSSSNPSDSSPNNNNNINNNNNNNGARK 60

Query: 61  RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL 120
           RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL
Sbjct: 61  RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIIL 120

Query: 121 YGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASS 180
           YGSRAQLNLQSTSPNNNYSSSN SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASS
Sbjct: 121 YGSRAQLNLQSTSPNNNYSSSN-SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASS 180

Query: 181 LPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTI 240
           LPLMPSPQS+TAIYPP  SLIYPNLLHNQYP Q+TQHPTHEIITSSTTTVTN TPPIST 
Sbjct: 181 LPLMPSPQSYTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVTNCTPPISTT 240

Query: 241 ATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSL 300
           ATPSSPTTSYSQNPNNPTLLL+SPLPPLPSDLILGPIGPSSPAVGWPSLD+NDDDYLPSL
Sbjct: 241 ATPSSPTTSYSQNPNNPTLLLASPLPPLPSDLILGPIGPSSPAVGWPSLDINDDDYLPSL 300

Query: 301 WDYHDPFFFDF 306
           WDYHDPFFFDF
Sbjct: 301 WDYHDPFFFDF 308

[Close]

BLAST of Csa6G011730 vs. NCBI nr
Match: gi|223532273|gb|EEF34076.1| (hypothetical protein RCOM_0839150 [Ricinus communis])

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 152/333 (45.65%), Postives = 191/333 (57.36%), Query Frame = 1


Query: 34  SSSNPSDSSPNNNN----NNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 93
           +S N SDS+ NNN+    NN  +RK KG+GGPDNNKFRYRGVRQRSWGKWVAEIREPRKR
Sbjct: 39  TSDNNSDSNNNNNSSSGDNNGNSRKCKGRGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 98

Query: 94  TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSS 153
           TRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ ++ ++  SSS+SSSSSSSS+R+SS
Sbjct: 99  TRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSNSSSTQSSSSSSSSSSSSTRASS 158

Query: 154 STS---LRPLLPRPALSSTFSFS-SMASSLPLMPSPQSFTAIYP---------PPPSLIY 213
           S+S   LRPLLPRP   S F F+ S++S+ P + S      ++            P L  
Sbjct: 159 SSSSQTLRPLLPRP---SAFGFTFSLSSTPPAVSSEFGTYGVFQHQNQNVNVGSSPVLCP 218

Query: 214 PNLLHNQYPAQVTQHP-------THEIITSSTTTVTNS--TPPISTIATPSSPTTSYSQN 273
            N++ NQ    +  H         +  +  S+  +T      P +T     +  TSY QN
Sbjct: 219 ANIVQNQQEQLLQSHHYQYHHQYQNPFLAGSSNFITCDPIIIPATTTTAAEATATSYHQN 278

Query: 274 ---------PNNP-----------------------TLLLSSPLPPLPSDLILGP---IG 305
                    P+ P                       +L LSS   P+ +     P   +G
Sbjct: 279 LNYVYNDHIPHQPQHHQEQQHGMYQDIASLVGSVGSSLSLSSSTQPVIAPANQDPVMHVG 338

[Close]

BLAST of Csa6G011730 vs. NCBI nr
Match: gi|502097709|ref|XP_004491058.1| (PREDICTED: ethylene-responsive transcription factor ABI4 [Cicer arietinum])

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 126/212 (59.43%), Postives = 150/212 (70.75%), Query Frame = 1


Query: 13  HLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVR 72
           H + + KP    + +PS  S +SS+ ++S  N+N      RK KGKGGPDNNKFRYRGVR
Sbjct: 18  HTVQETKPTAVVTTTPSETSNNSSSSNNS--NSNKQQQQHRKCKGKGGPDNNKFRYRGVR 77

Query: 73  QRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNY 132
           QRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAA+ILYGSRAQLNLQ +S +++ 
Sbjct: 78  QRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAALILYGSRAQLNLQPSSSSSHS 137

Query: 133 SSSNSSSSSSSSSRSSSSTS--LRPLLPRPALSSTFSFSSMASSLPLM----------PS 192
           SS NSSSSSSSSSR+SSS+S  LRPLLPRP   S+FSFS+ +S LPL+           +
Sbjct: 138 SSHNSSSSSSSSSRNSSSSSNTLRPLLPRP---SSFSFSN-SSHLPLLFNSSSNAFLPYA 197

Query: 193 PQSFTAIYPPPPSLIYPNLL-HNQYPAQVTQH 212
             SF   + P       NLL H+    Q+ QH
Sbjct: 198 AYSFNTFHQPFIQNSNTNLLQHSDKLVQLQQH 223

[Close]

BLAST of Csa6G011730 vs. NCBI nr
Match: gi|502097709|ref|XP_004491058.1| (PREDICTED: ethylene-responsive transcription factor ABI4 [Cicer arietinum])

HSP 1 Score: 40.8 bits (94), Expect = 5.0e+00
Identity = 20/37 (54.05%), Postives = 27/37 (72.97%), Query Frame = 1


Query: 269 GPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFFDF 306
           G IG  SP++ WP    +++DY  +LWDY+DPFFFDF
Sbjct: 303 GNIG--SPSM-WPL--TSEEDYTTTLWDYNDPFFFDF 334

HSP 2 Score: 206.5 bits (524), Expect = 6.8e-50
Identity = 144/345 (41.74%), Postives = 192/345 (55.65%), Query Frame = 1


Query: 17  QPKPLDHSSPSPS-SPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRS 76
           + KP   ++P P+ S +P++S  S SS NNN  +N  RK KGKGGPDNNKFRYRGVRQRS
Sbjct: 11  ETKPTATTAPIPTLSQTPNTS--SSSSDNNNPPHNNNRKCKGKGGPDNNKFRYRGVRQRS 70

Query: 77  WGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSS 136
           WGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAA+ILYGSRAQLNLQ +   N+ SS+
Sbjct: 71  WGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSVSVNSNSSN 130

Query: 137 NSSSSSSSSSRSSSSTSLRPLLPRPA---------------------LSSTFSFSSMASS 196
           +SS   SSSS SSS+ +LRPLLPRP+                      ++ FS ++ +  
Sbjct: 131 SSSRGGSSSSSSSSTQTLRPLLPRPSGFTFSSGSRFPVVFNGLHNNNNNNNFSAATASGF 190

Query: 197 LPLMPSPQS---FTAIYPPPPSLIY----PNLLHNQYPAQVTQ-----HPTHEIITSS-- 256
           +P    P S     ++  PPP   +    P +L  Q   Q+ Q     H  H+    S  
Sbjct: 191 VPFGVFPFSNGNNNSVVAPPPVQFHHQYSPQVLQIQQQQQLQQQQQQCHHRHQKADESGG 250

Query: 257 TTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLLL--------SSPLPPLPSDL------ 303
           TT++  ++   +   T + P + Y   P+  + ++        S+    L  D       
Sbjct: 251 TTSIRLTSHQNNNNNTTNHP-SGYVHRPHQESCMVMEEEVLNYSNNNNNLAVDSTLSSSE 310

The following BLAST results are available for this feature:

BLAST of Csa6G011730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ABI4_ARATH	1.9e-47	66.43	Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE...	[more]
ERF93_ARATH	1.3e-11	36.26	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=...	[more]
TPRXL_HUMAN	1.0e-08	31.11	Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5 SV=2	[more]
PI3K2_DICDI	2.5e-07	28.96	Phosphatidylinositol 3-kinase 2 OS=Dictyostelium discoideum GN=pikB PE=2 SV=2	[more]
YH5D_SCHPO	5.5e-07	25.65	Uncharacterized serine-rich protein C215.13 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of Csa6G011730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBN1_CUCSA	1.1e-176	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011730 PE=4 SV=1	[more]
K7KAX0_SOYBN	4.0e-57	44.06	Uncharacterized protein OS=Glycine max GN=GLYMA_02G264700 PE=4 SV=1	[more]
A0A061FK92_THECC	5.3e-57	45.95	Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
B9P4N2_SOYBN	1.2e-56	43.77	SGR OS=Glycine max PE=2 SV=1	[more]
V4V9W4_9ROSI	1.5e-56	44.41	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033578mg PE=4 SV=1	[more]

BLAST of Csa6G011730 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40220.1	1.0e-48	66.43	Integrase-type DNA-binding superfamily protein	[more]
AT3G57600.1	2.4e-24	64.63	Integrase-type DNA-binding superfamily protein	[more]
AT3G11020.1	5.8e-23	51.85	DRE/CRT-binding protein 2B	[more]
AT1G75490.1	7.6e-23	52.43	Integrase-type DNA-binding superfamily protein	[more]
AT5G18450.1	1.3e-22	51.82	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Csa6G011730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441582\|ref\|XP_004138561.1\|	1.6e-176	100.00	PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis sativus]	[more]
gi\|659082050\|ref\|XP_008441640.1\|	3.8e-165	94.21	PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo]	[more]
gi\|223532273\|gb\|EEF34076.1\|	2.9e-56	45.65	hypothetical protein RCOM_0839150 [Ricinus communis]	[more]
gi\|502097709\|ref\|XP_004491058.1\|	1.6e-51	59.43	PREDICTED: ethylene-responsive transcription factor ABI4 [Cicer arietinum]	[more]
gi\|502097709\|ref\|XP_004491058.1\|	5.0e+00	54.05	PREDICTED: ethylene-responsive transcription factor ABI4 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0009738	abscisic acid-activated signaling pathway
GO:0048316	seed development

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0010353	response to trehalose
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0048316	seed development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006412	translation
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0005983	starch catabolic process
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0010449	root meristem growth
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0050826	response to freezing
biological_process	GO:0010896	regulation of triglyceride catabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0031930	mitochondria-nucleus signaling pathway
biological_process	GO:0009749	response to glucose
biological_process	GO:0048527	lateral root development
biological_process	GO:0019915	lipid storage
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G011730.1	Csa6G011730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 90..106 score: 1.5E-10coord: 68..79 score: 1.5
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 67..124 score: 1.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 67..112 score: 7.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 67..130 score: 2.2
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 67..124 score: 22
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 67..124 score: 9.81
None	No IPR available	PANTHER	PTHR31241	FAMILY NOT NAMED	coord: 37..305 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G011730	Cla006600	Watermelon (97103) v1	cuwmB533
Csa6G011730	MELO3C008308	Melon (DHL92) v3.5.1	cumeB467
Csa6G011730	ClCG11G006040	Watermelon (Charleston Gray)	cuwcgB429
Csa6G011730	Lsi03G002980	Bottle gourd (USVL1VR-Ls)	culsiB444
Csa6G011730	MELO3C008308.2	Melon (DHL92) v3.6.1	cumedB448
Csa6G011730	Cla97C11G212960	Watermelon (97103) v2	cuwmbB423
Csa6G011730	CSPI06G01780	Wild cucumber (PI 183967)	cpicuB314
Csa6G011730	CmaCh04G028940	Cucurbita maxima (Rimu)	cmacuB768
Csa6G011730	CmoCh04G030190	Cucurbita moschata (Rifu)	cmocuB759
Csa6G011730	Cp4.1LG01g21870	Cucurbita pepo (Zucchini)	cpecuB460
Csa6G011730	Cp4.1LG10g07720	Cucurbita pepo (Zucchini)	cpecuB086
Csa6G011730	CsGy6G001870	Cucumber (Gy14) v2	cgybcuB282
Csa6G011730	Carg05969	Silver-seed gourd	carcuB0023

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G011730	Cucumber (Chinese Long) v2	cucuB144
Csa6G011730	Cucumber (Chinese Long) v2	cucuB163
Csa6G011730	Cucumber (Gy14) v1	cgycuB195
Csa6G011730	Cucurbita maxima (Rimu)	cmacuB309
Csa6G011730	Cucurbita maxima (Rimu)	cmacuB682
Csa6G011730	Cucurbita maxima (Rimu)	cmacuB772
Csa6G011730	Cucurbita maxima (Rimu)	cmacuB774
Csa6G011730	Cucurbita maxima (Rimu)	cmacuB876
Csa6G011730	Cucurbita moschata (Rifu)	cmocuB296
Csa6G011730	Cucurbita moschata (Rifu)	cmocuB671
Csa6G011730	Cucurbita moschata (Rifu)	cmocuB764
Csa6G011730	Melon (DHL92) v3.5.1	cumeB459
Csa6G011730	Melon (DHL92) v3.5.1	cumeB506
Csa6G011730	Watermelon (Charleston Gray)	cuwcgB467
Csa6G011730	Watermelon (Charleston Gray)	cuwcgB490
Csa6G011730	Watermelon (97103) v1	cuwmB482
Csa6G011730	Watermelon (97103) v1	cuwmB508
Csa6G011730	Cucurbita pepo (Zucchini)	cpecuB198
Csa6G011730	Cucurbita pepo (Zucchini)	cpecuB465
Csa6G011730	Bottle gourd (USVL1VR-Ls)	culsiB432
Csa6G011730	Bottle gourd (USVL1VR-Ls)	culsiB458
Csa6G011730	Cucumber (Gy14) v2	cgybcuB184
Csa6G011730	Melon (DHL92) v3.6.1	cumedB491
Csa6G011730	Silver-seed gourd	carcuB0297
Csa6G011730	Silver-seed gourd	carcuB0586
Csa6G011730	Silver-seed gourd	carcuB0697
Csa6G011730	Watermelon (97103) v2	cuwmbB458
Csa6G011730	Watermelon (97103) v2	cuwmbB482
Csa6G011730	Wax gourd	cuwgoB586