CSPI06G01780 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G01780
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ethylene-responsive transcription factor ABI4
Location	Chr6 : 1325706 .. 1326635 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCTCAACCTAAACCACTTGACCATTCTTCTCCTTCACCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCATAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

mRNA sequence

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCTCAACCTAAACCACTTGACCATTCTTCTCCTTCACCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCATAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Coding sequence (CDS)

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCTCAACCTAAACCACTTGACCATTCTTCTCCTTCACCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCATAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Homology

[Close]

BLAST of CSPI06G01780 vs. Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 7.7e-33
Identity = 95/151 (62.91%), Postives = 119/151 (78.81%), Query Frame = 1


Query: 18  PKPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRS 77
           P    H       ++ + + +NP   S  +++ ++  RKRKGKGGPDN+KFRYRGVRQRS
Sbjct: 3   PLASQHQHNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRS 62

Query: 78  WGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSS 137
           WGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL  +SP ++ SSS
Sbjct: 63  WGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSP-SSVSSS 122

Query: 138 NSSSSSSSSSSSRSSSSTSLRPLLPRPALSS 169
           +SS S++SS S+ SSS+ +LRPLLPRPA ++
Sbjct: 123 SSSVSAASSPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of CSPI06G01780 vs. Swiss-Prot
Match: ABI4_ORYSJ (Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica GN=ABI4 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-26
Identity = 116/278 (41.73%), Postives = 153/278 (55.04%), Query Frame = 1


Query: 34  SPSSSNPSDSSHNNNNNNNGARKRK--GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 93
           +P++   + SS        G  K+K  GKGGP+N KFRYRGVRQRSWGKWVAEIREPRKR
Sbjct: 12  APAAETAASSSGAGGGGGGGRTKKKAAGKGGPENGKFRYRGVRQRSWGKWVAEIREPRKR 71

Query: 94  TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSSSRS 153
           +RKWLGTF+TAEDAARAYDRAA++LYG RA LNL +  P      S+++++++SSSS+ S
Sbjct: 72  SRKWLGTFATAEDAARAYDRAALLLYGPRAHLNLTAPPPLPPPPPSSAAAAAASSSSAAS 131

Query: 154 SSST-SLRPLLPRPA-LSSTFSFSSMASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQYP 213
           S+S   LRPLLPRP  L   F        L L P P       PPPP  +Y       Y 
Sbjct: 132 STSAPPLRPLLPRPPHLHPAFHHQPFHHHL-LQPQP-------PPPPPPLY-------YA 191

Query: 214 AQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLLLSSPLPPLPSD 273
           A  +        TS+ TT T + PP    A P++   + + +    T  + +  P   + 
Sbjct: 192 ATAS--------TSTVTTTTTAPPPQLAAAAPAAVLVAAAVSSTAETQAVVATAPEDAAS 251

Query: 274 LILGPIGPSSPAVGWPSLDVNDDDYLPS-LWDYHDPFF 307
                      A G+   D  ++DY  + LW   DP+F
Sbjct: 252 AAAAAAAEEEAAWGFHGGD--EEDYAAALLWSEPDPWF 264

[Close]

BLAST of CSPI06G01780 vs. Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.8e-19
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 118 GSRAQLNLQSTSPNNNYSSSNS 140
           G  A LNL     N   S SNS
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of CSPI06G01780 vs. Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.7e-17
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           KGKGGPDN+   +RGVRQR WGKWVAEIREP+  TR WLGTF TAE AA AYD AA  +Y
Sbjct: 66  KGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMY 125

Query: 118 GSRAQLNLQSTSPNNNYSSSNSSS 142
           GS A+LN    S  + ++S++S S
Sbjct: 126 GSLARLNFPQ-SVGSEFTSTSSQS 148

[Close]

BLAST of CSPI06G01780 vs. Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-16
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           KGKGGP+N++  +RGVRQR WGKWVAEIREP + +R WLGTF TA++AA AYD AA  +Y
Sbjct: 67  KGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMY 126

Query: 118 GSRAQLNLQSTSPNNNYSSSNSSSSSS 145
           G  A+LN     P ++ S   S+SS S
Sbjct: 127 GPLARLNF----PRSDASEVTSTSSQS 149

[Close]

BLAST of CSPI06G01780 vs. TrEMBL
Match: A0A0A0KBN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011730 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 3.7e-151
Identity = 304/309 (98.38%), Postives = 304/309 (98.38%), Query Frame = 1


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGK 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPSPS  SPSPSSSNPSDSS NNNNNNNGARKRKGK
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPS--SPSPSSSNPSDSSPNNNNNNNGARKRKGK 60

Query: 61  GGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSR 120
           GGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSR
Sbjct: 61  GGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSR 120

Query: 121 AQLNLQSTSPNNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP 180
           AQLNLQSTSPNNNYSSSNS  SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP
Sbjct: 121 AQLNLQSTSPNNNYSSSNS--SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP 180

Query: 181 LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT 240
           LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT
Sbjct: 181 LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT 240

Query: 241 PSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWD 300
           PSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWD
Sbjct: 241 PSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWD 300

Query: 301 YHDPFFFDF 310
           YHDPFFFDF
Sbjct: 301 YHDPFFFDF 305

[Close]

BLAST of CSPI06G01780 vs. TrEMBL
Match: K7KAX0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G264700 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 153/346 (44.22%), Postives = 190/346 (54.91%), Query Frame = 1


Query: 14  LLPQP---KPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGKGGPDNNKFRY 73
           LLPQP   KP   ++   +PS  S ++S    SS NNNN+++ +RK KGKGGPDNNKFRY
Sbjct: 4   LLPQPQETKPTATTATETTPSETSITASANKSSSSNNNNSSSNSRKCKGKGGPDNNKFRY 63

Query: 74  RGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSP 133
           RGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ    
Sbjct: 64  RGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQ---- 123

Query: 134 NNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTA 193
                  + SSS SSSS S SSS+ +LRPLLPRP+   TF+F   ++    +P P + + 
Sbjct: 124 ------PSGSSSQSSSSRSSSSSTQTLRPLLPRPS-GFTFNFPFNSAPATTVPYPYNNSH 183

Query: 194 IYPPPPSLIYP---NLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPI-------STIAT 253
            Y   P ++YP   +  HN    QV  HP H         V +S   +       + +  
Sbjct: 184 NYTYTPPVLYPIDNSKNHNINTVQV-HHPHHYRCPEEVVQVPHSESDLGGLGGNNNIVVD 243

Query: 254 PSSPTTSYSQ-------NPNNPTL-----------------------LLSSPLPPLPSDL 309
            S  +TSY +       N NN  +                       + SS +  + S +
Sbjct: 244 GSIRSTSYQRHGFLDNINNNNNHVHVQVQHGVFSNQQQQHQNSVVEGVNSSVVGSVSSSM 303

[Close]

BLAST of CSPI06G01780 vs. TrEMBL
Match: B9SQP9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0839150 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 153/333 (45.95%), Postives = 190/333 (57.06%), Query Frame = 1


Query: 36  SSSNPSDSSHNNNN----NNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 95
           +S N SDS++NNN+    NN  +RK KG+GGPDNNKFRYRGVRQRSWGKWVAEIREPRKR
Sbjct: 39  TSDNNSDSNNNNNSSSGDNNGNSRKCKGRGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 98

Query: 96  TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ-STSPNNNYSSSNSSSSSSSSSSSR 155
           TRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ S S +   SSS+SSSSSSS+ +S 
Sbjct: 99  TRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSNSSSTQSSSSSSSSSSSSTRASS 158

Query: 156 SSSSTSLRPLLPRPALSSTFSFS-SMASSLPLMPSPQSFTAIYP---------PPPSLIY 215
           SSSS +LRPLLPRP   S F F+ S++S+ P + S      ++            P L  
Sbjct: 159 SSSSQTLRPLLPRP---SAFGFTFSLSSTPPAVSSEFGTYGVFQHQNQNVNVGSSPVLCP 218

Query: 216 PNLLHNQYPAQVTQHP-------THEIITSSTTTVTNS--TPPISTIATPSSPTTSYSQN 275
            N++ NQ    +  H         +  +  S+  +T      P +T     +  TSY QN
Sbjct: 219 ANIVQNQQEQLLQSHHYQYHHQYQNPFLAGSSNFITCDPIIIPATTTTAAEATATSYHQN 278

Query: 276 ---------PNNP-----------------------TLLLSSPLPPLPSDLILGP---IG 309
                    P+ P                       +L LSS   P+ +     P   +G
Sbjct: 279 LNYVYNDHIPHQPQHHQEQQHGMYQDIASLVGSVGSSLSLSSSTQPVIAPANQDPVMHVG 338

[Close]

BLAST of CSPI06G01780 vs. TrEMBL
Match: B9P4N2_SOYBN (SGR OS=Glycine max PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.2e-38
Identity = 152/346 (43.93%), Postives = 190/346 (54.91%), Query Frame = 1


Query: 14  LLPQP---KPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGKGGPDNNKFRY 73
           LLPQP   KP   ++   +PS  S ++S    SS NNNN+++ +RK +GKGGPDNNKFRY
Sbjct: 4   LLPQPQETKPTATTATETTPSETSITASANKSSSSNNNNSSSNSRKCEGKGGPDNNKFRY 63

Query: 74  RGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSP 133
           RGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ    
Sbjct: 64  RGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQ---- 123

Query: 134 NNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTA 193
                  + SSS SSSS S SSS+ +LRPLLPRP+   TF+F   ++    +P P + + 
Sbjct: 124 ------PSGSSSQSSSSRSSSSSTQTLRPLLPRPS-GFTFNFPFNSAPATTVPYPYNNSH 183

Query: 194 IYPPPPSLIYP---NLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPI-------STIAT 253
            Y   P ++YP   +  HN    QV  HP H         V +S   +       + +  
Sbjct: 184 NYTYTPPVLYPIDNSKNHNINTVQV-HHPHHYRCPEEVVQVPHSESDLGGLGGNNNIVVD 243

Query: 254 PSSPTTSYSQ-------NPNNPTL-----------------------LLSSPLPPLPSDL 309
            S  +TSY +       N NN  +                       + SS +  + S +
Sbjct: 244 GSIRSTSYQRHGFLDNINNNNNHVHVQVQHGVFSNQQQQHQNSVVEGVNSSVVGSVSSSM 303

[Close]

BLAST of CSPI06G01780 vs. TrEMBL
Match: V4V9W4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033578mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 153/349 (43.84%), Postives = 196/349 (56.16%), Query Frame = 1


Query: 21  LDHSSPSP---------------SPSSPSPSSSNPSDSSHNNNNNNNGARKRKGKGGPDN 80
           +D SSP P               + SS   +S N  ++S NNNNNNN  +K KGKGGPDN
Sbjct: 1   MDDSSPHPIQENATVTTTNNTKSTDSSTITTSDNTCNNSSNNNNNNNNNKKCKGKGGPDN 60

Query: 81  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 140
           +KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 61  SKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNL 120

Query: 141 Q-STSPNNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRP-ALSSTFSFSS--------M 200
           Q STS ++++SS+++       SSS +SS  +LRPLLPRP     TFS SS        +
Sbjct: 121 QPSTSSSSSHSSNSTRGGGGGGSSSSNSSQQTLRPLLPRPTGFGFTFSASSANPAAGAGL 180

Query: 201 ASSLPLMPSPQSFTAIYPPPPSLIYPNLLH--------NQYPAQVTQHPTHEIITSSTTT 260
           +SS  L+P    +  I     +L+ PN++          Q   ++  +  H +       
Sbjct: 181 SSSSGLVPY-GVYPNIMSVSSALLCPNIVQVQNQRDMMMQQQCEIQNYHHHHLQIQQVPD 240

Query: 261 VTNSTPPISTIATPSSPTTSYSQNPNN---------------------PTLLLSSPL--- 309
             NS   I+     ++ T+SY  NPN+                      TL LS+ +   
Sbjct: 241 GLNSVSCINDTLAAAASTSSYG-NPNHQQQYEQNCLYHDISSIAGSMGSTLSLSTQVAHA 300

[Close]

BLAST of CSPI06G01780 vs. TAIR10
Match: AT2G40220.1 (AT2G40220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 142.5 bits (358), Expect = 4.3e-34
Identity = 95/151 (62.91%), Postives = 119/151 (78.81%), Query Frame = 1


Query: 18  PKPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRS 77
           P    H       ++ + + +NP   S  +++ ++  RKRKGKGGPDN+KFRYRGVRQRS
Sbjct: 3   PLASQHQHNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRS 62

Query: 78  WGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSS 137
           WGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL  +SP ++ SSS
Sbjct: 63  WGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSP-SSVSSS 122

Query: 138 NSSSSSSSSSSSRSSSSTSLRPLLPRPALSS 169
           +SS S++SS S+ SSS+ +LRPLLPRPA ++
Sbjct: 123 SSSVSAASSPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of CSPI06G01780 vs. TAIR10
Match: AT3G57600.1 (AT3G57600.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-20
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 118 GSRAQLNLQSTSPNNNYSSSNS 140
           G  A LNL     N   S SNS
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of CSPI06G01780 vs. TAIR10
Match: AT3G11020.1 (AT3G11020.1 DRE/CRT-binding protein 2B)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-18
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           KGKGGPDN+   +RGVRQR WGKWVAEIREP+  TR WLGTF TAE AA AYD AA  +Y
Sbjct: 66  KGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMY 125

Query: 118 GSRAQLNLQSTSPNNNYSSSNSSS 142
           GS A+LN    S  + ++S++S S
Sbjct: 126 GSLARLNFPQ-SVGSEFTSTSSQS 148

[Close]

BLAST of CSPI06G01780 vs. TAIR10
Match: AT5G05410.1 (AT5G05410.1 DRE-binding protein 2A)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           KGKGGP+N++  +RGVRQR WGKWVAEIREP + +R WLGTF TA++AA AYD AA  +Y
Sbjct: 67  KGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMY 126

Query: 118 GSRAQLNLQSTSPNNNYSSSNSSSSSS 145
           G  A+LN     P ++ S   S+SS S
Sbjct: 127 GPLARLNF----PRSDASEVTSTSSQS 149

[Close]

BLAST of CSPI06G01780 vs. TAIR10
Match: AT2G40350.1 (AT2G40350.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-17
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 58  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 117
           KGKGGP+N    Y GVRQR+WGKWVAEIREP +  + WLGTFS++ +AA AYD A+  +Y
Sbjct: 55  KGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIY 114

Query: 118 GSRAQLNL 126
           G  A+LNL
Sbjct: 115 GQSARLNL 122

[Close]

BLAST of CSPI06G01780 vs. NCBI nr
Match: gi|449441582|ref|XP_004138561.1| (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis sativus])

HSP 1 Score: 542.3 bits (1396), Expect = 5.3e-151
Identity = 304/309 (98.38%), Postives = 304/309 (98.38%), Query Frame = 1


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGK 60
           MDPDHSPSSSSSHLLPQPKPLDHSSPSPS  SPSPSSSNPSDSS NNNNNNNGARKRKGK
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPS--SPSPSSSNPSDSSPNNNNNNNGARKRKGK 60

Query: 61  GGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSR 120
           GGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSR
Sbjct: 61  GGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSR 120

Query: 121 AQLNLQSTSPNNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP 180
           AQLNLQSTSPNNNYSSSNS  SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP
Sbjct: 121 AQLNLQSTSPNNNYSSSNS--SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLP 180

Query: 181 LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT 240
           LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT
Sbjct: 181 LMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIAT 240

Query: 241 PSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWD 300
           PSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWD
Sbjct: 241 PSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWD 300

Query: 301 YHDPFFFDF 310
           YHDPFFFDF
Sbjct: 301 YHDPFFFDF 305

[Close]

BLAST of CSPI06G01780 vs. NCBI nr
Match: gi|659082050|ref|XP_008441640.1| (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo])

HSP 1 Score: 515.4 bits (1326), Expect = 7.0e-143
Identity = 292/315 (92.70%), Postives = 296/315 (93.97%), Query Frame = 1


Query: 1   MDPDHSPSSSSSHLLPQPKPLDHSSPSPSPSSPSPSSSNPSDSSH------NNNNNNNGA 60
           MDPDHSPSSSSSHLLPQPKPLDHS    SPSSPSPSSSNPSDSS       NNNNNNNGA
Sbjct: 1   MDPDHSPSSSSSHLLPQPKPLDHS----SPSSPSPSSSNPSDSSPNNNNNINNNNNNNGA 60

Query: 61  RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAI 120
           RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAI
Sbjct: 61  RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAI 120

Query: 121 ILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSS 180
           ILYGSRAQLNLQSTSPNNNYSSSN   SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSS
Sbjct: 121 ILYGSRAQLNLQSTSPNNNYSSSN---SSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSS 180

Query: 181 MASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPP 240
           MASSLPLMPSPQS+TAIYPP  SLIYPNLLHNQYP Q+TQHPTHEIITSSTTTVTN TPP
Sbjct: 181 MASSLPLMPSPQSYTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVTNCTPP 240

Query: 241 ISTIATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDY 300
           IST ATPSSPTTSYSQNPNNPTLLL+SPLPPLPSDLILGPIGPSSPAVGWPSLD+NDDDY
Sbjct: 241 ISTTATPSSPTTSYSQNPNNPTLLLASPLPPLPSDLILGPIGPSSPAVGWPSLDINDDDY 300

Query: 301 LPSLWDYHDPFFFDF 310
           LPSLWDYHDPFFFDF
Sbjct: 301 LPSLWDYHDPFFFDF 308

[Close]

BLAST of CSPI06G01780 vs. NCBI nr
Match: gi|947125075|gb|KRH73281.1| (hypothetical protein GLYMA_02G264700 [Glycine max])

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38
Identity = 153/346 (44.22%), Postives = 190/346 (54.91%), Query Frame = 1


Query: 14  LLPQP---KPLDHSSPSPSPSSPSPSSSNPSDSSHNNNNNNNGARKRKGKGGPDNNKFRY 73
           LLPQP   KP   ++   +PS  S ++S    SS NNNN+++ +RK KGKGGPDNNKFRY
Sbjct: 4   LLPQPQETKPTATTATETTPSETSITASANKSSSSNNNNSSSNSRKCKGKGGPDNNKFRY 63

Query: 74  RGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSP 133
           RGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ    
Sbjct: 64  RGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQ---- 123

Query: 134 NNNYSSSNSSSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTA 193
                  + SSS SSSS S SSS+ +LRPLLPRP+   TF+F   ++    +P P + + 
Sbjct: 124 ------PSGSSSQSSSSRSSSSSTQTLRPLLPRPS-GFTFNFPFNSAPATTVPYPYNNSH 183

Query: 194 IYPPPPSLIYP---NLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPI-------STIAT 253
            Y   P ++YP   +  HN    QV  HP H         V +S   +       + +  
Sbjct: 184 NYTYTPPVLYPIDNSKNHNINTVQV-HHPHHYRCPEEVVQVPHSESDLGGLGGNNNIVVD 243

Query: 254 PSSPTTSYSQ-------NPNNPTL-----------------------LLSSPLPPLPSDL 309
            S  +TSY +       N NN  +                       + SS +  + S +
Sbjct: 244 GSIRSTSYQRHGFLDNINNNNNHVHVQVQHGVFSNQQQQHQNSVVEGVNSSVVGSVSSSM 303

[Close]

BLAST of CSPI06G01780 vs. NCBI nr
Match: gi|223532273|gb|EEF34076.1| (hypothetical protein RCOM_0839150 [Ricinus communis])

HSP 1 Score: 168.3 bits (425), Expect = 2.1e-38
Identity = 153/333 (45.95%), Postives = 190/333 (57.06%), Query Frame = 1


Query: 36  SSSNPSDSSHNNNN----NNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 95
           +S N SDS++NNN+    NN  +RK KG+GGPDNNKFRYRGVRQRSWGKWVAEIREPRKR
Sbjct: 39  TSDNNSDSNNNNNSSSGDNNGNSRKCKGRGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 98

Query: 96  TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ-STSPNNNYSSSNSSSSSSSSSSSR 155
           TRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ S S +   SSS+SSSSSSS+ +S 
Sbjct: 99  TRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSNSSSTQSSSSSSSSSSSSTRASS 158

Query: 156 SSSSTSLRPLLPRPALSSTFSFS-SMASSLPLMPSPQSFTAIYP---------PPPSLIY 215
           SSSS +LRPLLPRP   S F F+ S++S+ P + S      ++            P L  
Sbjct: 159 SSSSQTLRPLLPRP---SAFGFTFSLSSTPPAVSSEFGTYGVFQHQNQNVNVGSSPVLCP 218

Query: 216 PNLLHNQYPAQVTQHP-------THEIITSSTTTVTNS--TPPISTIATPSSPTTSYSQN 275
            N++ NQ    +  H         +  +  S+  +T      P +T     +  TSY QN
Sbjct: 219 ANIVQNQQEQLLQSHHYQYHHQYQNPFLAGSSNFITCDPIIIPATTTTAAEATATSYHQN 278

Query: 276 ---------PNNP-----------------------TLLLSSPLPPLPSDLILGP---IG 309
                    P+ P                       +L LSS   P+ +     P   +G
Sbjct: 279 LNYVYNDHIPHQPQHHQEQQHGMYQDIASLVGSVGSSLSLSSSTQPVIAPANQDPVMHVG 338

[Close]

BLAST of CSPI06G01780 vs. NCBI nr
Match: gi|1000948240|ref|XP_002528318.2| (PREDICTED: ethylene-responsive transcription factor ABI4 [Ricinus communis])

HSP 1 Score: 168.3 bits (425), Expect = 2.1e-38
Identity = 153/333 (45.95%), Postives = 190/333 (57.06%), Query Frame = 1


Query: 36  SSSNPSDSSHNNNN----NNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 95
           +S N SDS++NNN+    NN  +RK KG+GGPDNNKFRYRGVRQRSWGKWVAEIREPRKR
Sbjct: 39  TSDNNSDSNNNNNSSSGDNNGNSRKCKGRGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 98

Query: 96  TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ-STSPNNNYSSSNSSSSSSSSSSSR 155
           TRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQ S S +   SSS+SSSSSSS+ +S 
Sbjct: 99  TRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSNSSSTQSSSSSSSSSSSSTRASS 158

Query: 156 SSSSTSLRPLLPRPALSSTFSFS-SMASSLPLMPSPQSFTAIYP---------PPPSLIY 215
           SSSS +LRPLLPRP   S F F+ S++S+ P + S      ++            P L  
Sbjct: 159 SSSSQTLRPLLPRP---SAFGFTFSLSSTPPAVSSEFGTYGVFQHQNQNVNVGSSPVLCP 218

Query: 216 PNLLHNQYPAQVTQHP-------THEIITSSTTTVTNS--TPPISTIATPSSPTTSYSQN 275
            N++ NQ    +  H         +  +  S+  +T      P +T     +  TSY QN
Sbjct: 219 ANIVQNQQEQLLQSHHYQYHHQYQNPFLAGSSNFITCDPIIIPATTTTAAEATATSYHQN 278

Query: 276 ---------PNNP-----------------------TLLLSSPLPPLPSDLILGP---IG 309
                    P+ P                       +L LSS   P+ +     P   +G
Sbjct: 279 LNYVYNDHIPHQPQHHQEQQHGMYQDIASLVGSVGSSLSLSSSTQPVIAPANQDPVMHVG 338

The following BLAST results are available for this feature:

BLAST of CSPI06G01780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ABI4_ARATH	7.7e-33	62.91	Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE...	[more]
ABI4_ORYSJ	4.1e-26	41.73	Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica GN...	[more]
DRE2F_ARATH	2.8e-19	64.63	Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DRE...	[more]
DRE2B_ARATH	2.7e-17	61.90	Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DRE...	[more]
DRE2A_ARATH	2.9e-16	57.47	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DRE...	[more]

BLAST of CSPI06G01780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBN1_CUCSA	3.7e-151	98.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011730 PE=4 SV=1	[more]
K7KAX0_SOYBN	1.1e-38	44.22	Uncharacterized protein OS=Glycine max GN=GLYMA_02G264700 PE=4 SV=1	[more]
B9SQP9_RICCO	1.5e-38	45.95	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0839150 PE=4 SV=1	[more]
B9P4N2_SOYBN	3.2e-38	43.93	SGR OS=Glycine max PE=2 SV=1	[more]
V4V9W4_9ROSI	2.8e-37	43.84	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033578mg PE=4 SV=1	[more]

BLAST of CSPI06G01780 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40220.1	4.3e-34	62.91	Integrase-type DNA-binding superfamily protein	[more]
AT3G57600.1	1.6e-20	64.63	Integrase-type DNA-binding superfamily protein	[more]
AT3G11020.1	1.5e-18	61.90	DRE/CRT-binding protein 2B	[more]
AT5G05410.1	1.7e-17	57.47	DRE-binding protein 2A	[more]
AT2G40350.1	3.7e-17	61.76	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CSPI06G01780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441582\|ref\|XP_004138561.1\|	5.3e-151	98.38	PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis sativus]	[more]
gi\|659082050\|ref\|XP_008441640.1\|	7.0e-143	92.70	PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo]	[more]
gi\|947125075\|gb\|KRH73281.1\|	1.6e-38	44.22	hypothetical protein GLYMA_02G264700 [Glycine max]	[more]
gi\|223532273\|gb\|EEF34076.1\|	2.1e-38	45.95	hypothetical protein RCOM_0839150 [Ricinus communis]	[more]
gi\|1000948240\|ref\|XP_002528318.2\|	2.1e-38	45.95	PREDICTED: ethylene-responsive transcription factor ABI4 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0009738	abscisic acid-activated signaling pathway
GO:0048316	seed development

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0010353	response to trehalose
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0048316	seed development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006412	translation
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0005983	starch catabolic process
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0010449	root meristem growth
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0050826	response to freezing
biological_process	GO:0010896	regulation of triglyceride catabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0031930	mitochondria-nucleus signaling pathway
biological_process	GO:0009749	response to glucose
biological_process	GO:0048527	lateral root development
biological_process	GO:0019915	lipid storage
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G01780.1	CSPI06G01780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 92..108 score: 1.5E-10coord: 70..81 score: 1.5
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 69..126 score: 1.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 69..114 score: 7.5
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 69..132 score: 2.2
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 69..126 score: 22
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 69..126 score: 9.81
None	No IPR available	PANTHER	PTHR31241	FAMILY NOT NAMED	coord: 39..309 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G01780	Cla006600	Watermelon (97103) v1	cpiwmB552
CSPI06G01780	Csa6G011730	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G01780	MELO3C008308	Melon (DHL92) v3.5.1	cpimeB465
CSPI06G01780	ClCG11G006040	Watermelon (Charleston Gray)	cpiwcgB450
CSPI06G01780	Lsi03G002980	Bottle gourd (USVL1VR-Ls)	cpilsiB451
CSPI06G01780	MELO3C008308.2	Melon (DHL92) v3.6.1	cpimedB457
CSPI06G01780	CsaV3_6G001910	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G01780	Cla97C11G212960	Watermelon (97103) v2	cpiwmbB447
CSPI06G01780	CmaCh04G028940	Cucurbita maxima (Rimu)	cmacpiB777
CSPI06G01780	CmoCh04G030190	Cucurbita moschata (Rifu)	cmocpiB768
CSPI06G01780	Cp4.1LG01g21870	Cucurbita pepo (Zucchini)	cpecpiB461
CSPI06G01780	Cp4.1LG10g07720	Cucurbita pepo (Zucchini)	cpecpiB082
CSPI06G01780	CsGy6G001870	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G01780	Carg05969	Silver-seed gourd	carcpiB0024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G01780	Cucumber (Chinese Long) v2	cpicuB298
CSPI06G01780	Cucumber (Chinese Long) v2	cpicuB308
CSPI06G01780	Melon (DHL92) v3.5.1	cpimeB454
CSPI06G01780	Melon (DHL92) v3.5.1	cpimeB517
CSPI06G01780	Watermelon (Charleston Gray)	cpiwcgB491
CSPI06G01780	Watermelon (Charleston Gray)	cpiwcgB516
CSPI06G01780	Watermelon (97103) v1	cpiwmB497
CSPI06G01780	Watermelon (97103) v1	cpiwmB502
CSPI06G01780	Watermelon (97103) v1	cpiwmB527
CSPI06G01780	Cucurbita pepo (Zucchini)	cpecpiB199
CSPI06G01780	Cucurbita pepo (Zucchini)	cpecpiB466
CSPI06G01780	Bottle gourd (USVL1VR-Ls)	cpilsiB437
CSPI06G01780	Bottle gourd (USVL1VR-Ls)	cpilsiB465
CSPI06G01780	Melon (DHL92) v3.6.1	cpimedB500
CSPI06G01780	Cucumber (Gy14) v2	cgybcpiB187
CSPI06G01780	Silver-seed gourd	carcpiB0301
CSPI06G01780	Silver-seed gourd	carcpiB0592
CSPI06G01780	Silver-seed gourd	carcpiB0709
CSPI06G01780	Cucumber (Chinese Long) v3	cpicucB348
CSPI06G01780	Cucumber (Chinese Long) v3	cpicucB357
CSPI06G01780	Watermelon (97103) v2	cpiwmbB483
CSPI06G01780	Watermelon (97103) v2	cpiwmbB508
CSPI06G01780	Wax gourd	cpiwgoB591
CSPI06G01780	Wild cucumber (PI 183967)	cpicpiB159
CSPI06G01780	Cucumber (Gy14) v1	cgycpiB198
CSPI06G01780	Cucumber (Gy14) v1	cgycpiB213
CSPI06G01780	Cucurbita maxima (Rimu)	cmacpiB314
CSPI06G01780	Cucurbita maxima (Rimu)	cmacpiB690
CSPI06G01780	Cucurbita maxima (Rimu)	cmacpiB783
CSPI06G01780	Cucurbita maxima (Rimu)	cmacpiB784
CSPI06G01780	Cucurbita maxima (Rimu)	cmacpiB892
CSPI06G01780	Cucurbita moschata (Rifu)	cmocpiB305
CSPI06G01780	Cucurbita moschata (Rifu)	cmocpiB682
CSPI06G01780	Cucurbita moschata (Rifu)	cmocpiB773