CsGy6G001870 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G001870
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionethylene-responsive transcription factor ABI4
LocationChr6 : 1324565 .. 1325482 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

mRNA sequence

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Coding sequence (CDS)

ATGGATCCCGACCATTCACCTTCTTCTTCTTCCTCTCACCTCCTCCCCCAACCTAAACCACTCGACCATTCTTCTCCTTCACCTTCTTCTCCTTCTCCTTCTTCCTCTAACCCTTCCGATTCTTCTCCTAATAACAACAACAACAATAATGGCGCCCGTAAACGAAAAGGCAAAGGCGGCCCCGACAACAACAAATTCCGTTACCGTGGCGTCCGTCAACGCAGCTGGGGTAAATGGGTTGCCGAGATTCGTGAGCCCCGTAAACGTACCCGCAAGTGGCTCGGTACTTTCTCCACCGCTGAAGACGCCGCTCGTGCTTACGACCGCGCTGCCATCATCCTCTACGGCTCCCGTGCCCAACTCAACCTCCAATCCACTTCTCCTAATAATAATTATTCTTCCTCTAATTCATCCTCTTCCTCCTCCTCCTCCTCCCGTTCCTCCTCCTCCACCTCCCTCCGCCCTCTCCTCCCACGCCCCGCCCTCTCCTCCACCTTCTCCTTCTCCTCCATGGCTTCTTCTCTCCCCCTTATGCCCTCCCCTCAATCTTTCACCGCCATCTATCCACCTCCTCCTTCCTTAATATATCCTAATCTCCTACATAATCAATACCCAGCACAAGTTACCCAACACCCCACCCACGAAATAATTACGTCTTCCACTACTACTGTTACTAATTCCACTCCACCTATTTCTACTATTGCCACTCCCTCTTCACCAACAACCTCGTATTCCCAAAACCCTAATAATCCCACCTTGCTTCTTTCTTCCCCACTTCCACCTCTACCTTCAGATCTCATTCTTGGGCCTATTGGGCCTTCTTCTCCCGCCGTTGGATGGCCCTCTTTGGACGTCAACGATGACGATTATCTTCCTTCTCTTTGGGACTACCACGATCCTTTCTTCTTTGATTTCTGA

Protein sequence

MDPDHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQSFTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTSYSQNPNNPTLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFFDF
Homology
[Close]
BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_004138561.1 (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis sativus] >KGN45797.1 hypothetical protein Csa_6G011730 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS
Sbjct: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183

Query: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX 243
           FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX
Sbjct: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX 243

Query: 244 XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF 303
           XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF
Sbjct: 244 XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF 303

Query: 304 DF 306
           DF
Sbjct: 304 DF 305

[Close]
BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_008441640.1 (PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 232/242 (95.87%), Postives = 236/242 (97.52%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 68  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 127

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           QSTS XXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS
Sbjct: 128 QSTS-XXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 187

Query: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX 243
           +TAIYPP  SLIYPNLLHNQYP Q+TQHPTHEIITSSTT  XXXXXXXXXXXXXXXXXXX
Sbjct: 188 YTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVXXXXXXXXXXXXXXXXXXX 247

Query: 244 XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF 303
           XXXXXXXXXLLL+SPLPPLPSDLILGPIGPSSPAVGWPSLD+NDDDYLPSLWDYHDPFFF
Sbjct: 248 XXXXXXXXXLLLASPLPPLPSDLILGPIGPSSPAVGWPSLDINDDDYLPSLWDYHDPFFF 307

Query: 304 DF 306
           DF
Sbjct: 308 DF 308

[Close]
BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_022959999.1 (ethylene-responsive transcription factor ABI4 [Cucurbita moschata])

HSP 1 Score: 177.2 bits (448), Expect = 8.6e-41
Identity = 168/256 (65.62%), Postives = 182/256 (71.09%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 68  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 127

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q+ SXXXXXXXXXXXXXXXXXXXXXXXXXX                              
Sbjct: 128 QAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 184 FT--------AIYPPPP-SLIYPNLLHNQYPAQVTQH------PTHEIITSSTTXXXXXX 243
                      +YP P  +L+ PNL+H QYP Q+TQH      P++EI ++ST       
Sbjct: 188 XXXXXXFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPHAFSAPSNEIPSTSTVTTSIAT 247

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDD 303
           XXXXXXXXXXXXXXXXXXXXXXXX    +P PPL SDL++GPIGP SPAVGWP    ND+
Sbjct: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXVAP-PPLVSDLVVGPIGPGSPAVGWPL--ENDE 307

Query: 304 DYLPSLWDYHDPFFFD 305
           DYLPSLWDY DPFFFD
Sbjct: 308 DYLPSLWDYGDPFFFD 319

[Close]
BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_023545386.1 (ethylene-responsive transcription factor ABI4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 168/258 (65.12%), Postives = 183/258 (70.93%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 81  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 140

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q++SXXXXXXXXXXXXXXXXXXXXXXXXXX                              
Sbjct: 141 QASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200

Query: 184 FT----------AIYPPPP-SLIYPNLLHNQYPAQVTQH------PTHEIITSSTTXXXX 243
                        +YP P  +L+ PNL+H QYP Q+TQH      P++EI ++ST     
Sbjct: 201 XXXXXXXXFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPHAFSAPSNEIPSTSTVTTSI 260

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVN 303
             XXXXXXXXXXXXXXXXXXXXXXXX    +P PPL SDL++GPIGP SPAVGWP    N
Sbjct: 261 ATXXXXXXXXXXXXXXXXXXXXXXXXXXXVAP-PPLVSDLVVGPIGPGSPAVGWPL--EN 320

Query: 304 DDDYLPSLWDYHDPFFFD 305
           D+DYLPSLWDY DPFFFD
Sbjct: 321 DEDYLPSLWDYGDPFFFD 334

[Close]
BLAST of CsGy6G001870 vs. NCBI nr
Match: XP_022990590.1 (ethylene-responsive transcription factor ABI4 [Cucurbita maxima])

HSP 1 Score: 175.3 bits (443), Expect = 3.3e-40
Identity = 146/261 (55.94%), Postives = 161/261 (61.69%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 76  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 135

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q+  XXXXXXXXXXXXXXXXXXXXXXXXXX                              
Sbjct: 136 QAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 195

Query: 184 FT-----AIYPPPP-SLIYPNLLHNQYPAQVTQH------PTHEIITSSTTXXXXXXXXX 243
                   +YP P  +L+ PNL+H QYP Q+TQH      P++EI ++ST          
Sbjct: 196 XXXFLPYGVYPSPGFTLMCPNLVH-QYPPQLTQHPHAFSAPSNEIPSTSTV--------- 255

Query: 244 XXXXXXXXXXXXXXXXXXXXXLLLSSPL--------PPLPSDLILGPIGPSSPAVGWPSL 303
                                LL++SP         PPL SDL++GPIGP SPAVGWP  
Sbjct: 256 TTTIATPSQPSTTSYHQNPNPLLVASPQINPTPVAPPPLVSDLVVGPIGPGSPAVGWPL- 315

Query: 304 DVNDDDYLPSLWDYHDPFFFD 305
             ND+DYLPSLWDY DPFFFD
Sbjct: 316 -ENDEDYLPSLWDYGDPFFFD 324

[Close]
BLAST of CsGy6G001870 vs. TAIR10
Match: AT2G40220.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 8.6e-27
Identity = 56/60 (93.33%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           +KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL
Sbjct: 51  SKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNL 110

[Close]
BLAST of CsGy6G001870 vs. TAIR10
Match: AT3G57600.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-18
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 67  RYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 124
           +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LYG  A LNL
Sbjct: 27  QYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNL 83

[Close]
BLAST of CsGy6G001870 vs. TAIR10
Match: AT1G36060.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 6.2e-17
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 68  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLN 123
           YRGVRQR WGKWVAEIR PR RTR WLGTF TAE+AA AYDRAA  L G  A+LN
Sbjct: 143 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLN 197

[Close]
BLAST of CsGy6G001870 vs. TAIR10
Match: AT2G20880.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 6.2e-17
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 68  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLN 123
           YRGVRQR WGKWVAEIR+PR RTR WLGTF TAE+AA AYDR A  L G  A+LN
Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLN 241

[Close]
BLAST of CsGy6G001870 vs. TAIR10
Match: AT4G34410.1 (redox responsive transcription factor 1)

HSP 1 Score: 85.1 bits (209), Expect = 8.1e-17
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 68  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLN 123
           YRGVRQR WGK+ AEIR+P++ TR WLGTF TAEDAARAYDRAAI   G RA+LN
Sbjct: 136 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLN 190

[Close]
BLAST of CsGy6G001870 vs. Swiss-Prot
Match: sp|A0MES8|ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana OX=3702 GN=ABI4 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25
Identity = 56/60 (93.33%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           +KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAA+ LYGSRAQLNL
Sbjct: 51  SKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNL 110

[Close]
BLAST of CsGy6G001870 vs. Swiss-Prot
Match: sp|C7J2Z1|ABI4_ORYSJ (Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica OX=39947 GN=ABI4 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-24
Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 65  KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 124
           KFRYRGVRQRSWGKWVAEIREPRKR+RKWLGTF+TAEDAARAYDRAA++LYG RA LNL
Sbjct: 47  KFRYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGPRAHLNL 105

[Close]
BLAST of CsGy6G001870 vs. Swiss-Prot
Match: sp|Q9SVX5|DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=3702 GN=DREB2F PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-17
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 67  RYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 124
           +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAE+AA AYD AA+ LYG  A LNL
Sbjct: 27  QYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNL 83

[Close]
BLAST of CsGy6G001870 vs. Swiss-Prot
Match: sp|Q10R18|DRE2E_ORYSJ (Dehydration-responsive element-binding protein 2E OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2E PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 68  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 124
           YRGVRQR+WGKWVAEIREP KRTR WLG+F+TAE+AA AYD AA  LYG  A LNL
Sbjct: 28  YRGVRQRTWGKWVAEIREPNKRTRLWLGSFATAEEAALAYDEAARRLYGPDAFLNL 83

[Close]
BLAST of CsGy6G001870 vs. Swiss-Prot
Match: sp|Q9SKT1|ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana OX=3702 GN=ERF053 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 68  YRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLN 123
           YRGVRQR WGKWVAEIR+PR RTR WLGTF TAE+AA AYDR A  L G  A+LN
Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLN 241

[Close]
BLAST of CsGy6G001870 vs. TrEMBL
Match: tr|A0A0A0KBN1|A0A0A0KBN1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011730 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.3e-93
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS
Sbjct: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183

Query: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX 243
           FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX
Sbjct: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX 243

Query: 244 XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF 303
           XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF
Sbjct: 244 XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF 303

Query: 304 DF 306
           DF
Sbjct: 304 DF 305

[Close]
BLAST of CsGy6G001870 vs. TrEMBL
Match: tr|A0A1S3B3F1|A0A1S3B3F1_CUCME (ethylene-responsive transcription factor ABI4 OS=Cucumis melo OX=3656 GN=LOC103485721 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 9.6e-89
Identity = 232/242 (95.87%), Postives = 236/242 (97.52%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 68  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 127

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           QSTS XXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS
Sbjct: 128 QSTS-XXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 187

Query: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTXXXXXXXXXXXXXXXXXXXXX 243
           +TAIYPP  SLIYPNLLHNQYP Q+TQHPTHEIITSSTT  XXXXXXXXXXXXXXXXXXX
Sbjct: 188 YTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVXXXXXXXXXXXXXXXXXXX 247

Query: 244 XXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVGWPSLDVNDDDYLPSLWDYHDPFFF 303
           XXXXXXXXXLLL+SPLPPLPSDLILGPIGPSSPAVGWPSLD+NDDDYLPSLWDYHDPFFF
Sbjct: 248 XXXXXXXXXLLLASPLPPLPSDLILGPIGPSSPAVGWPSLDINDDDYLPSLWDYHDPFFF 307

Query: 304 DF 306
           DF
Sbjct: 308 DF 308

[Close]
BLAST of CsGy6G001870 vs. TrEMBL
Match: tr|A0A2N9IX26|A0A2N9IX26_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56581 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 7.0e-31
Identity = 142/269 (52.79%), Postives = 163/269 (60.59%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 43  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNL 102

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q +    XXXXXXXXXXXXXXXXXXXXX  RPLLPRP+    F+F S +S++P+MPS  +
Sbjct: 103 QPSG--PXXXXXXXXXXXXXXXXXXXXXTLRPLLPRPS-GFGFTFPSTSSTIPMMPS-SN 162

Query: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTH---------EIITSSTTXXXXXXXXXXXX 243
               Y   PS    N+  +    Q                 + T +     XXXXXXXXX
Sbjct: 163 INVPYGIFPSASPYNIAQSSPQQQQMVXXXXXXXXXXCDGNLGTVNIDGLDXXXXXXXXX 222

Query: 244 XXXXXXXXXXXXXXXXXXLLLS------------------SPLPPLPSDLILGPIGPSSP 303
           XX                L+ S                  +P+ P P    +G IGP SP
Sbjct: 223 XXPNPNDQQGFMYNDINTLVGSVGSNLSLNNNNTTTQPVVAPMGPDP----VGAIGPGSP 282

Query: 304 AVGWPSLDVNDDDYLPSLWDYHDPFFFDF 306
           ++ WP L  N++DY PSLWDY DPF FDF
Sbjct: 283 SM-WPPL-TNEEDYTPSLWDYGDPFLFDF 301

[Close]
BLAST of CsGy6G001870 vs. TrEMBL
Match: tr|A0A2I4EQL6|A0A2I4EQL6_9ROSI (ethylene-responsive transcription factor ABI4 OS=Juglans regia OX=51240 GN=LOC108991752 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 9.1e-31
Identity = 133/266 (50.00%), Postives = 152/266 (57.14%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKR+RKWLGTF+TAEDAARAYDRAAIILYGSRAQLNL
Sbjct: 64  NKFRYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAAIILYGSRAQLNL 123

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q +     XXXXXXXXXXXXXXXXXXXX  RPLLPRP+    F+FSS  S+LP M S   
Sbjct: 124 QPSG----XXXXXXXXXXXXXXXXXXXXTLRPLLPRPS-GFGFTFSSTPSTLPTMSSSGI 183

Query: 184 FT-AIYPP-PPSLIYPNLLHNQYPAQVTQHPTHE-------------IITSSTTXXXXXX 243
               IYP   PS++  N +       V Q+  H+               T+S        
Sbjct: 184 VPYGIYPSGSPSILSLNNMVQNPQQMVQQYQYHQSCDGTVGDGVDRAATTTSYQNPCHQH 243

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXLLLS-----SPLPPLPSDLILGPIGPSSPAVGWPSL 303
                                   L LS     +P+ P P    +G +GP SP+V WP  
Sbjct: 244 SYQQQHQNYLYNDINSLVGSVDSSLSLSKQPVVAPVAPDP----VGAVGPGSPSV-WPL- 303

Query: 304 DVNDDDYLPSLWDYHD-----PFFFD 305
             ND+ Y P+LWDY D     PF FD
Sbjct: 304 -TNDEVYAPNLWDYGDPEYDNPFLFD 317

[Close]
BLAST of CsGy6G001870 vs. TrEMBL
Match: tr|A0A061FK92|A0A061FK92_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_042471 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 5.9e-30
Identity = 138/268 (51.49%), Postives = 155/268 (57.84%), Query Frame = 0 

Query: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGS+AQLNL
Sbjct: 71  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSKAQLNL 130

Query: 124 QSTSXXXXXXXXXXXXXXXXXXXXXXXXXXRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183
           Q +   XXXXXXXXXXXXXXXXXXXXXXX RPLLPRP   S F+FS  +SS P +  P S
Sbjct: 131 QPS--VXXXXXXXXXXXXXXXXXXXXXXXLRPLLPRP---SGFAFSFASSSNP-VTHPAS 190

Query: 184 FTAIYPPP---PSLIYPNLL-----------HNQYPAQVTQHPTHEII----------TS 243
             A        P  +YPNLL           + Q   Q+ Q     ++          TS
Sbjct: 191 LIAGGSSSKFMPYGVYPNLLGPAALXXXXVQNPQQALQIVQQTEPSLVVNPGDPTGTLTS 250

Query: 244 STTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLSSPLPPLPSDLILGPIGPSSPAVG 303
            T                               L   + + P   D  L  +GP SP+V 
Sbjct: 251 YTNPNPQQTQQHHQGSLYEDINSLVGSVGSSLSLSAQTSVAPAVPDPGL-TVGPGSPSV- 310

Query: 304 WPSLDVNDDDYLPS-LWDYHDP-FFFDF 306
           WP    NDDDY P+ +WDY DP FFFDF
Sbjct: 311 WPL--TNDDDYPPACIWDYGDPNFFFDF 328

The following BLAST results are available for this feature:
BLAST of CsGy6G001870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138561.12.0e-93100.00PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis sativus] >KGN4... [more]
XP_008441640.11.4e-8895.87PREDICTED: ethylene-responsive transcription factor ABI4 [Cucumis melo][more]
XP_022959999.18.6e-4165.63ethylene-responsive transcription factor ABI4 [Cucurbita moschata][more]
XP_023545386.11.1e-4065.12ethylene-responsive transcription factor ABI4 [Cucurbita pepo subsp. pepo][more]
XP_022990590.13.3e-4055.94ethylene-responsive transcription factor ABI4 [Cucurbita maxima][more]
BLAST of CsGy6G001870 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40220.18.6e-2793.33Integrase-type DNA-binding superfamily protein[more]
AT3G57600.13.3e-1873.68Integrase-type DNA-binding superfamily protein[more]
AT1G36060.16.2e-1776.36Integrase-type DNA-binding superfamily protein[more]
AT2G20880.16.2e-1774.55Integrase-type DNA-binding superfamily protein[more]
AT4G34410.18.1e-1774.55redox responsive transcription factor 1[more]
BLAST of CsGy6G001870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A0MES8|ABI4_ARATH1.6e-2593.33Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|C7J2Z1|ABI4_ORYSJ5.0e-2489.83Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q9SVX5|DRE2F_ARATH5.9e-1773.68Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=370... [more]
sp|Q10R18|DRE2E_ORYSJ2.2e-1676.79Dehydration-responsive element-binding protein 2E OS=Oryza sativa subsp. japonic... [more]
sp|Q9SKT1|ERF53_ARATH1.1e-1574.55Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CsGy6G001870 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBN1|A0A0A0KBN1_CUCSA1.3e-93100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011730 PE=4 SV=1[more]
tr|A0A1S3B3F1|A0A1S3B3F1_CUCME9.6e-8995.87ethylene-responsive transcription factor ABI4 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A2N9IX26|A0A2N9IX26_FAGSY7.0e-3152.79Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56581 PE=4 SV=1[more]
tr|A0A2I4EQL6|A0A2I4EQL6_9ROSI9.1e-3150.00ethylene-responsive transcription factor ABI4 OS=Juglans regia OX=51240 GN=LOC10... [more]
tr|A0A061FK92|A0A061FK92_THECC5.9e-3051.49Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao OX=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0048316seed development
GO:0009738abscisic acid-activated signaling pathway
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR033266ABI4
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048316 seed development
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G001870.1CsGy6G001870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 90..106
score: 68.77
coord: 68..79
score: 73.18
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 67..130
e-value: 2.2E-38
score: 143.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 67..112
e-value: 1.4E-11
score: 44.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 67..124
score: 22.418
IPR001471AP2/ERF domainCDDcd00018AP2coord: 67..124
e-value: 1.8705E-20
score: 81.9343
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 67..125
e-value: 1.2E-28
score: 100.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..247
NoneNo IPR availablePANTHERPTHR31241FAMILY NOT NAMEDcoord: 22..246
IPR033266Ethylene-responsive transcription factor ABI4PANTHERPTHR31241:SF7ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4coord: 22..246
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 67..124

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G001870Cla006600Watermelon (97103) v1cgybwmB497
CsGy6G001870Csa6G011730Cucumber (Chinese Long) v2cgybcuB282
CsGy6G001870MELO3C008308Melon (DHL92) v3.5.1cgybmeB407
CsGy6G001870ClCG11G006040Watermelon (Charleston Gray)cgybwcgB397
CsGy6G001870CSPI06G01780Wild cucumber (PI 183967)cgybcpiB288
CsGy6G001870CmoCh04G030190Cucurbita moschata (Rifu)cgybcmoB816
CsGy6G001870Lsi03G002980Bottle gourd (USVL1VR-Ls)cgyblsiB409
CsGy6G001870Cp4.1LG01g21870Cucurbita pepo (Zucchini)cgybcpeB798
CsGy6G001870MELO3C008308.2Melon (DHL92) v3.6.1cgybmedB406
CsGy6G001870CsaV3_6G001910Cucumber (Chinese Long) v3cgybcucB298
CsGy6G001870Cla97C11G212960Watermelon (97103) v2cgybwmbB403
CsGy6G001870Carg05969Silver-seed gourdcarcgybB0023
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G001870Wax gourdcgybwgoB558
CsGy6G001870Cucumber (Gy14) v2cgybcgybB130
CsGy6G001870Cucumber (Gy14) v2cgybcgybB145
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB737
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB741
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB832
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB836
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB840
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB842
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB859
CsGy6G001870Cucurbita maxima (Rimu)cgybcmaB860
CsGy6G001870Cucurbita moschata (Rifu)cgybcmoB722
CsGy6G001870Cucurbita moschata (Rifu)cgybcmoB812
CsGy6G001870Cucurbita moschata (Rifu)cgybcmoB820
CsGy6G001870Cucurbita moschata (Rifu)cgybcmoB841
CsGy6G001870Cucurbita moschata (Rifu)cgybcmoB842
CsGy6G001870Cucurbita pepo (Zucchini)cgybcpeB711
CsGy6G001870Cucurbita pepo (Zucchini)cgybcpeB741
CsGy6G001870Cucurbita pepo (Zucchini)cgybcpeB803
CsGy6G001870Cucurbita pepo (Zucchini)cgybcpeB812
CsGy6G001870Cucurbita pepo (Zucchini)cgybcpeB835
CsGy6G001870Cucurbita pepo (Zucchini)cgybcpeB886
CsGy6G001870Cucumber (Chinese Long) v2cgybcuB270
CsGy6G001870Cucumber (Chinese Long) v2cgybcuB277
CsGy6G001870Bottle gourd (USVL1VR-Ls)cgyblsiB396
CsGy6G001870Bottle gourd (USVL1VR-Ls)cgyblsiB424
CsGy6G001870Melon (DHL92) v3.5.1cgybmeB398
CsGy6G001870Melon (DHL92) v3.5.1cgybmeB450
CsGy6G001870Melon (DHL92) v3.6.1cgybmedB445
CsGy6G001870Watermelon (Charleston Gray)cgybwcgB429
CsGy6G001870Watermelon (Charleston Gray)cgybwcgB451
CsGy6G001870Watermelon (97103) v1cgybwmB452
CsGy6G001870Watermelon (97103) v1cgybwmB455
CsGy6G001870Watermelon (97103) v1cgybwmB476
CsGy6G001870Wild cucumber (PI 183967)cgybcpiB277
CsGy6G001870Silver-seed gourdcarcgybB0284
CsGy6G001870Silver-seed gourdcarcgybB0562
CsGy6G001870Silver-seed gourdcarcgybB0673
CsGy6G001870Cucumber (Chinese Long) v3cgybcucB283
CsGy6G001870Cucumber (Chinese Long) v3cgybcucB292
CsGy6G001870Watermelon (97103) v2cgybwmbB435
CsGy6G001870Watermelon (97103) v2cgybwmbB459