Csa6G008630 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G008630
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ring finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr6 : 829726 .. 833598 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTTGGGTAACGTTTGGGAAATGTGTAGAGAATAGCAAAAAGAAGAGGGAGGCGTTAGAATTTGACCAAACCGAGACAATACTACGTCGTTTTAATGATTCAAGTCCTTTTACCAAAGTCTGCCGTAGTTGGAAGCCAAGCCCAAGACGGGTCTTAGAGCAACTCAACGCGTCCGAGTCACCTCCCTTCACTCGACTCGCTCCCTCATCTTCTCCGTCGCCACACCGAAGCCCACCTTTTCTTTTTCATTTTTCTTTTCCTTCTTCACACAATTTTAACAGACCCCATCGTCGAAACTTTTCGATTCGAAGCAAACCTTGTCGCTTTTGGACCTACACAATTAACCCCATTTACTCGATTTTGTTCTGTAAGTCTCGGATTTCCCTTAACAATGATCATTCTTGTTAGATTATTTGCTGATCCCTGTTCTCTTATACCTTCTGTTTCTTCGTAATTCGTTTCTGGGGTTCTTTAATTGTGTCTGATTGTTTTATCCTTTGGATTTCACTTGTTTAACTGTCATCGAACCTTATAGTTATACGGCTGTAGAATTGTTGTTTTGTCTGAATCTGTTTATCGATTGATGTTTTTGCTACATTTGATTTCGAAGCTGATCTGGTACCCAGTAGTTCTGATTTCGAAGTTGACAATTTGCATTTTAGTGAAGACCTCAATCTTTTAAATATTGGGTGTCTGTATGCACTTGGAGTTTGAGTGCATTCATCTTACAGTCCTTTGGTTCCTTTGGATGCCCAAATGATGGGGAAATGTCTTGTGTACTTCTGGATATATTTTCACTTTTCAGACAATGCTCTTCCTTTCTTTGAGGGTTTTCAGGTTTAGATATATATATTTTTTTATGTTGTCTTAAGGAATCAATGACTTTGAGTTATCTAATCTATATGACGCAGATGATCAGCTCATGAGTGAGGCTTAGGCATTGAATTTGATAACTAAGGAATGATTAATTGGGAATTCCATGCTCTTCTTGTTGAATTACACATGTGATGGATGTACCATATATGAACATGTCAATACTTAAAAGAACTTCAAACTCTTTGAAATTCTTTATGATTATATTTGTGTTGTATAGGTGGTCATTGTGTAGCCATGTACATTACATCTACACATTTATATGGTTAAAGGAACGTTATAGTTTAGGCTATCATGAGTTTTTTATTCTTTAGACTTCACTTCTTATGTTACTTGTTCGTTGAATAATCCATCGGGGCTGAGAATGATGAATGATGTGTTATTGTAGTAAGGATATGTGGGTTGTTTGACTATTAAGATAATGGAGCCTCTTTCTCTAAGAGTTATGCAGATTATTGATGGCTATAAATTCATAAGACTTTCATCCTGTAGATTCACATTACCCTGAAATCAACTAGCTGTTGCAACTATTGCAGACATGAGTTTTGTCTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCTGAAAGGCGTGCAATGGTATGCTCAATATTTTGTATTATTGACCTGTTAATACCAATGCTTGGAAATTTCTAGATATTGCACTAGTTATGATTCTAATTTTTTTATTCATTTTTTTTTTGCTCACAATCAGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCGCTTGCCTTTCTTGTCACAGGTACTATTTCATCTATGTACAGACTCTGATATCTGTTTCATGTAATAATATTGATCTATTGCATTTTTTTTAAATCCTCGACTTTTGTTGCAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCTAACTTTCTGGTACATTTCATATTCCACATTGTGAATAAGTAGTATTTTGATTTTACTCTCTCACCCTTGACATGAATCTTTACATTTTCTTGCTTTGAACGTGCATATTTAGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTTGACGATCTAGGTATGGTTCAAATTTAATAAGTGCAAGTTCGTAGCTTCAAATTTTGTCAAATATGGCCACCGTTCTTTTACATTCTCAGTGGCACAAACTCTCGTGTGTGTGCATATGTGGGGGGAAACTTTATCAATTGGATTTCTTTGACAAGATTCTGAAATTAATCATTTTGATGTGGGTTTCTGAAAAAGCAAGAAATTCACTTATTCGGGCAATTTTTTTTTTTGTTGATAAGACTTCTTTGGCATTGTTCTGACATGATAAGCTAGCGGTAAATGCATGAAGTCAAATAGGATAGAAGTAGTGATTTTTATGGAACTTTAAACTTGCTGAAGTAGTCGTCAAGTGTTGAAAAGAAAGTGTCCTGAACTTGCTTCTGATAGTATGGTTGGGATGGACAGTACCTTCATGAAACTTCAAATTTGTTGGGTATCTTTTTCTGATTTCTAACTTTTTTTAAACCCTGTCATTATATGTTTTAAATTTTATATCTACATATATGGTTGATTATGCTATGTTAAACATATCATTTGTCTTCAGATTATGAAACCTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGGTAATCAATGTAATATTCGTCTACATTCCAGAATGACTTCTGTTGTTTTAATTTAAGAATACATAGTCTTTGCTGAGACTTTTCAACGATGAAATATGTGTACTCCAGCTTATTACCAAAACTAAAATTGAGTTTTCATTTTTCATTAAATTATCTGCAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTATTGAGGTACCTAAATAGGTTCACATTTTTTTTCGTTACATGTTTGATTCCTTTTTTGCCTTAAATGGCGTGTACAAAATTACAAATACAATAATTGCTCGTTTTAGAAGGAAATATAGTTCTGAAAGGAGACAGAAGGCCAAAACTTTCCTGTTTTTTAGCCTTATTATTTGTATACCACACACTCTTCTCATCAGTTATCAATTTTTGAGTTCGTACTGTTTTTTAATTTTGATTGCAGAAGAGACAAGATTCAGTTAATGCAGTTGGCAGTACCAAAACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGGTTAATCTCCATCTCTATGCCAGTCTCCTTTCCTTCCAAACAAATGGTTACTATTATTTCATTTTGAAAATTCAGGAATTTTGTTTCTTGCTATTATTACGTTTAGTGGTTGTTTCGCTTTGTTTGTCTTCTTTGGAGTTGAGGTCCCTTTACCTTCAAATTTTGATACATCTTCTTCCTGTTGGTATTCCAAGAGTTCTTTTAATTTGAATTCAATCTTGTAGTTCCATGCCAACTGCATAGATCCGTGGTTGCGACAGCAGGGAACATGCCCAGTCTGTAAATTCAGAGCAGTATCCGGATGGTCAGAACAGGAACAAGGCGAAACCGATGCTTATATGGTTTAGTTGTGGATGCAAAGCAAGTTATCAAACAACGCTCGCATCGAGCCTTTATTAAAAGCAAAGGATATGGACAGACATGGTGTAATTAGGGTTAGGGTAGGCATTACAGGAATTGGAGTTGTCGTTTTGTATCTCTATGAACTTATGACGAGCCATTTAATTGTATT

mRNA sequence

ATGGATGGTTGGGTAACGTTTGGGAAATGTGTAGAGAATAGCAAAAAGAAGAGGGAGGCGTTAGAATTTGACCAAACCGAGACAATACTACGTCGTTTTAATGATTCAAGTCCTTTTACCAAAGTCTGCCGTAGTTGGAAGCCAAGCCCAAGACGGGTCTTAGAGCAACTCAACGCGTCCGAGTCACCTCCCTTCACTCGACTCGCTCCCTCATCTTCTCCGTCGCCACACCGAAGCCCACCTTTTCTTTTTCATTTTTCTTTTCCTTCTTCACACAATTTTAACAGACCCCATCGTCGAAACTTTTCGATTCGAAGCAAACCTTGTCGCTTTTGGACCTACACAATTAACCCCATTTACTCGATTTTGTTCTACATGAGTTTTGTCTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCTGAAAGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCGCTTGCCTTTCTTGTCACAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCTAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTTGACGATCTAGATTATGAAACCTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTATTGAGAAGAGACAAGATTCAGTTAATGCAGTTGGCAGTACCAAAACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCGTGGTTGCGACAGCAGGGAACATGCCCAGTCTGTAAATTCAGAGCAGTATCCGGATGGTCAGAACAGGAACAAGGCGAAACCGATGCTTATATGGTTTAG

Coding sequence (CDS)

ATGGATGGTTGGGTAACGTTTGGGAAATGTGTAGAGAATAGCAAAAAGAAGAGGGAGGCGTTAGAATTTGACCAAACCGAGACAATACTACGTCGTTTTAATGATTCAAGTCCTTTTACCAAAGTCTGCCGTAGTTGGAAGCCAAGCCCAAGACGGGTCTTAGAGCAACTCAACGCGTCCGAGTCACCTCCCTTCACTCGACTCGCTCCCTCATCTTCTCCGTCGCCACACCGAAGCCCACCTTTTCTTTTTCATTTTTCTTTTCCTTCTTCACACAATTTTAACAGACCCCATCGTCGAAACTTTTCGATTCGAAGCAAACCTTGTCGCTTTTGGACCTACACAATTAACCCCATTTACTCGATTTTGTTCTACATGAGTTTTGTCTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCTGAAAGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCGCTTGCCTTTCTTGTCACAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCTAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTTGACGATCTAGATTATGAAACCTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTATTGAGAAGAGACAAGATTCAGTTAATGCAGTTGGCAGTACCAAAACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCGTGGTTGCGACAGCAGGGAACATGCCCAGTCTGTAAATTCAGAGCAGTATCCGGATGGTCAGAACAGGAACAAGGCGAAACCGATGCTTATATGGTTTAG

Protein sequence

MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNASESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIYSILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV*

Homology

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BLAST of Csa6G008630 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 2.6e-118
Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSG-FIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMS 185
           MSFVFRG+R  D+E+G SG F+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 186 PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 245
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 246 GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 305
           GRLQGLRLQLALLDREFDDLDYETLRALDSDN  TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 306 SSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHAN 365
            S+ +QAS+S S EK  DS N   S K +EDELTCSVCLEQV VGE++R+LPCLHQFHA 
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 366 CIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDA 398
           CIDPWLRQQGTCPVCKFRA SGW EQ++ + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

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BLAST of Csa6G008630 vs. Swiss-Prot
Match: RNF43_HUMAN (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.7e-11
Identity = 33/94 (35.11%), Postives = 48/94 (51.06%), Query Frame = 1


Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           +++Q A+       RQ       S  +      C++CLE+ + G+ +R + CLH+FH NC
Sbjct: 239 AISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNC 298

Query: 366 IDPWLRQQGTCPVCKFRAVSGWS-EQEQGETDAY 399
           +DPWL Q  TCP+C F    G S  Q  G + +Y
Sbjct: 299 VDPWLHQHRTCPLCMFNITEGDSFSQSLGPSRSY 332

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BLAST of Csa6G008630 vs. Swiss-Prot
Match: RMR1_ORYSJ (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-10
Identity = 35/70 (50.00%), Postives = 40/70 (57.14%), Query Frame = 1


Query: 330 TKTSEDELT---CSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGT-CPVCKFRAVS 389
           TK  ED  T   C++CLE  NVGE +R LPC H+FHA C+D WL    T CPVCK  A +
Sbjct: 224 TKVQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDAST 283

Query: 390 GWSEQEQGET 396
           G  +    ET
Sbjct: 284 GIPDPPASET 293

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BLAST of Csa6G008630 vs. Swiss-Prot
Match: NIPL1_ARATH (NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-10
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 1


Query: 322 DSVNAVGS---TKTSEDELTCSVCLEQVNVGELIRSLP-CLHQFHANCIDPWLRQQGTCP 381
           DS+N +     T TS + ++CSVCL+   VGE +RSLP C H FH  CID WLR+  +CP
Sbjct: 156 DSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCP 215

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BLAST of Csa6G008630 vs. Swiss-Prot
Match: ZNRF3_XENLA (E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-10
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 1


Query: 295 KYKVSGPQSDSSVNQQASSS-ESIEKRQ----DSVNAVGS-----TKTSEDELTCSVCLE 354
           K K+   +S +S+N+ A  + E +E R+      V+  GS     T +S     C++CLE
Sbjct: 148 KIKLKQRRSQNSMNRMAVQALEKMETRKFKAKGKVSREGSCGGLDTLSSSSISDCAICLE 207

Query: 355 QVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQG 394
           +   GE +R +PC H+FH  C+DPWL Q  TCP C+   +    EQ++G
Sbjct: 208 KYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNII----EQKKG 252

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BLAST of Csa6G008630 vs. TrEMBL
Match: A0A0A0KBF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008630 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 8.6e-233
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1


Query: 1   MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNAS 60
           MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNAS
Sbjct: 1   MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNAS 60

Query: 61  ESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIY 120
           ESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIY
Sbjct: 61  ESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIY 120

Query: 121 SILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNS 180
           SILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNS
Sbjct: 121 SILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNS 180

Query: 181 HQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIA 240
           HQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIA
Sbjct: 181 HQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIA 240

Query: 241 LATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSG 300
           LATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSG
Sbjct: 241 LATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSG 300

Query: 301 PQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQ 360
           PQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQ
Sbjct: 301 PQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQ 360

Query: 361 FHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 401
           FHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV
Sbjct: 361 FHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

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BLAST of Csa6G008630 vs. TrEMBL
Match: E5GC70_CUCME (Protein binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 2.8e-151
Identity = 273/275 (99.27%), Postives = 273/275 (99.27%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           SVNQQASSSES EKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 401
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

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BLAST of Csa6G008630 vs. TrEMBL
Match: D7TLR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01960 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 3.4e-128
Identity = 236/276 (85.51%), Postives = 247/276 (89.49%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRG+R  DIE+G  GFIPERRA+RVHAARPVN+NSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGSRA-DIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFL+WLVLG+FLMATTLRMYATCQQLQAQAQA A AASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDS+N PTTPSMSEE+INALPVHKYKV+G Q   
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGG 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           S  QQ SSS S EK+QD  NAV STK  +DELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SSMQQGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDA-YMV 401
           IDPWLRQQGTCPVCKFRA  GW E  QG  DA YMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275

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BLAST of Csa6G008630 vs. TrEMBL
Match: A0A151RQE1_CAJCA (Protein goliath OS=Cajanus cajan GN=KK1_033735 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-127
Identity = 231/264 (87.50%), Postives = 244/264 (92.42%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRGTR  DIENG  GFIPERRA+RVHAARP NSNSL FLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRA-DIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFLLWLVLGVFLMAT LRMYATCQQLQAQAQA A AASG+LGHTELRLHMPPSIALA+RG
Sbjct: 61  NFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDSDN  T PSM+EE+INALPVHKYKVSGPQS S
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQSSS 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           S  QQASSS S+EK+QD+ NAVGS K S+DELTCSVCLEQVNVG+++RSLPCLHQFHANC
Sbjct: 181 SSMQQASSSASVEKKQDNSNAVGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSE 390
           IDPWLRQQGTCPVCKFRA SGW+E
Sbjct: 241 IDPWLRQQGTCPVCKFRAGSGWNE 263

[Close]

BLAST of Csa6G008630 vs. TrEMBL
Match: A0A0B2PIY8_GLYSO (E3 ubiquitin-protein ligase SDIR1 OS=Glycine soja GN=glysoja_019680 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 3.5e-125
Identity = 229/275 (83.27%), Postives = 243/275 (88.36%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRGTR  DIENG  GFIPERRA+RVHA RP NSNSL FLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRA-DIENGFPGFIPERRALRVHATRPSNSNSLTFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFLLWLVLGVFLMAT LRMYATCQQLQAQAQA A AASG+LGHTELRLHMPPSIALA+RG
Sbjct: 61  NFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDSDN  T PSM+EE+INALPVHKYKVSGPQ   
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQCGG 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           S  QQASSS   EK+QD+ NAVGS K S+D+LTCSVCLEQVNVG+++RSLPCLHQFHANC
Sbjct: 181 SSMQQASSSTPAEKKQDNSNAVGSMKASDDDLTCSVCLEQVNVGDVLRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 401
           IDPWLRQQGTCPVCKFRA SGWS+    +  A MV
Sbjct: 241 IDPWLRQQGTCPVCKFRAGSGWSDNGHNDIIADMV 274

[Close]

BLAST of Csa6G008630 vs. TAIR10
Match: AT3G55530.1 (AT3G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 426.8 bits (1096), Expect = 1.5e-119
Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSG-FIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMS 185
           MSFVFRG+R  D+E+G SG F+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 186 PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 245
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 246 GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 305
           GRLQGLRLQLALLDREFDDLDYETLRALDSDN  TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 306 SSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHAN 365
            S+ +QAS+S S EK  DS N   S K +EDELTCSVCLEQV VGE++R+LPCLHQFHA 
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 366 CIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDA 398
           CIDPWLRQQGTCPVCKFRA SGW EQ++ + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]

BLAST of Csa6G008630 vs. TAIR10
Match: AT1G04790.1 (AT1G04790.1 RING/U-box superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-14
Identity = 43/124 (34.68%), Postives = 59/124 (47.58%), Query Frame = 1


Query: 257 LDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSES 316
           +DR+F + DYE L ALD +N                 H++   G  S + +N    S+  
Sbjct: 542 MDRDFTEDDYELLLALDENN-----------------HRH---GGASANRINNLPESTVQ 601

Query: 317 IEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTC 376
            +  Q+               TC +CLE   +G+ IR LPCLH+FH +CIDPWL +  +C
Sbjct: 602 TDNFQE---------------TCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSC 630

Query: 377 PVCK 381
           PVCK
Sbjct: 662 PVCK 630

[Close]

BLAST of Csa6G008630 vs. TAIR10
Match: AT4G32600.1 (AT4G32600.1 RING/U-box superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-12
Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 1


Query: 286 EQINALPVHKYKVSGPQSDSSVNQQASSSESIEKR-QDSVNAVGSTKTSEDELTCSVCLE 345
           E INALP HK+K+   +S+   N  ++S   +     D+  A+     S ++  C +CL 
Sbjct: 314 ESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAI-----SGEDAVCCICLA 373

Query: 346 QVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 381
           +    E +R LPC H FH  C+D WL+   +CP+CK
Sbjct: 374 KYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404

[Close]

BLAST of Csa6G008630 vs. TAIR10
Match: AT1G80400.1 (AT1G80400.1 RING/U-box superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-12
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 1


Query: 275 DNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESIEKRQDSVNAVGSTKT-- 334
           +N   T   + E INALPV+++K          ++  +  E  E+ +     +GS K   
Sbjct: 298 ENFSQTRGATAEAINALPVYRFK----------SKSRNDLEFSEEGEGGFLLLGSQKKRL 357

Query: 335 -SEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 381
            S ++ +C +CL +    E +R LPC H FH +C+D WL+   TCP+CK
Sbjct: 358 ISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396

[Close]

BLAST of Csa6G008630 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-12
Identity = 31/81 (38.27%), Postives = 45/81 (55.56%), Query Frame = 1


Query: 320 RQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVC 379
           R+++V A+ + K  E  L CSVCL+    G   + +PC H+FH  CI PWL    +CPVC
Sbjct: 241 RKEAVEALPTVKIMEP-LQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVC 300

Query: 380 KFRAVSGWSEQEQGETDAYMV 401
           +F   S   + ++ +TD+  V
Sbjct: 301 RFELPSSADDDDETKTDSERV 320

[Close]

BLAST of Csa6G008630 vs. NCBI nr
Match: gi|700190528|gb|KGN45732.1| (hypothetical protein Csa_6G008630 [Cucumis sativus])

HSP 1 Score: 813.9 bits (2101), Expect = 1.2e-232
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1


Query: 1   MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNAS 60
           MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNAS
Sbjct: 1   MDGWVTFGKCVENSKKKREALEFDQTETILRRFNDSSPFTKVCRSWKPSPRRVLEQLNAS 60

Query: 61  ESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIY 120
           ESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIY
Sbjct: 61  ESPPFTRLAPSSSPSPHRSPPFLFHFSFPSSHNFNRPHRRNFSIRSKPCRFWTYTINPIY 120

Query: 121 SILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNS 180
           SILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNS
Sbjct: 121 SILFYMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNS 180

Query: 181 HQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIA 240
           HQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIA
Sbjct: 181 HQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIA 240

Query: 241 LATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSG 300
           LATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSG
Sbjct: 241 LATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSG 300

Query: 301 PQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQ 360
           PQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQ
Sbjct: 301 PQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQ 360

Query: 361 FHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 401
           FHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV
Sbjct: 361 FHANCIDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]

BLAST of Csa6G008630 vs. NCBI nr
Match: gi|449441410|ref|XP_004138475.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 9.6e-153
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 401
           IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 275

[Close]

BLAST of Csa6G008630 vs. NCBI nr
Match: gi|659081532|ref|XP_008441380.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 4.0e-151
Identity = 273/275 (99.27%), Postives = 273/275 (99.27%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           SVNQQASSSES EKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 401
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Csa6G008630 vs. NCBI nr
Match: gi|359486786|ref|XP_002283148.2| (PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Vitis vinifera])

HSP 1 Score: 466.5 bits (1199), Expect = 4.8e-128
Identity = 236/276 (85.51%), Postives = 247/276 (89.49%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRG+R  DIE+G  GFIPERRA+RVHAARPVN+NSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGSRA-DIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFL+WLVLG+FLMATTLRMYATCQQLQAQAQA A AASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDS+N PTTPSMSEE+INALPVHKYKV+G Q   
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGG 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           S  QQ SSS S EK+QD  NAV STK  +DELTCSVCLEQVNVGELIRSLPCLHQFHANC
Sbjct: 181 SSMQQGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDA-YMV 401
           IDPWLRQQGTCPVCKFRA  GW E  QG  DA YMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275

[Close]

BLAST of Csa6G008630 vs. NCBI nr
Match: gi|1012333361|gb|KYP44757.1| (Protein goliath [Cajanus cajan])

HSP 1 Score: 464.2 bits (1193), Expect = 2.4e-127
Identity = 231/264 (87.50%), Postives = 244/264 (92.42%), Query Frame = 1


Query: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185
           MSFVFRGTR  DIENG  GFIPERRA+RVHAARP NSNSL FLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRA-DIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSP 60

Query: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245
           NFLLWLVLGVFLMAT LRMYATCQQLQAQAQA A AASG+LGHTELRLHMPPSIALA+RG
Sbjct: 61  NFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRG 120

Query: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305
           RLQGLRLQLALLDREFDDLDYETLRALDSDN  T PSM+EE+INALPVHKYKVSGPQS S
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQSSS 180

Query: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365
           S  QQASSS S+EK+QD+ NAVGS K S+DELTCSVCLEQVNVG+++RSLPCLHQFHANC
Sbjct: 181 SSMQQASSSASVEKKQDNSNAVGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANC 240

Query: 366 IDPWLRQQGTCPVCKFRAVSGWSE 390
           IDPWLRQQGTCPVCKFRA SGW+E
Sbjct: 241 IDPWLRQQGTCPVCKFRAGSGWNE 263

The following BLAST results are available for this feature:

BLAST of Csa6G008630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SDIR1_ARATH	2.6e-118	80.59	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1	[more]
RNF43_HUMAN	3.7e-11	35.11	E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1 SV=1	[more]
RMR1_ORYSJ	1.1e-10	50.00	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
NIPL1_ARATH	2.4e-10	49.21	NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27 PE=2 SV=1	[more]
ZNRF3_XENLA	3.1e-10	35.78	E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2 SV=1	[more]

BLAST of Csa6G008630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBF9_CUCSA	8.6e-233	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008630 PE=4 SV=1	[more]
E5GC70_CUCME	2.8e-151	99.27	Protein binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
D7TLR3_VITVI	3.4e-128	85.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01960 PE=4 SV=...	[more]
A0A151RQE1_CAJCA	1.7e-127	87.50	Protein goliath OS=Cajanus cajan GN=KK1_033735 PE=4 SV=1	[more]
A0A0B2PIY8_GLYSO	3.5e-125	83.27	E3 ubiquitin-protein ligase SDIR1 OS=Glycine soja GN=glysoja_019680 PE=4 SV=1	[more]

BLAST of Csa6G008630 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55530.1	1.5e-119	80.59	RING/U-box superfamily protein	[more]
AT1G04790.1	2.2e-14	34.68	RING/U-box superfamily protein	[more]
AT4G32600.1	1.6e-12	35.42	RING/U-box superfamily protein	[more]
AT1G80400.1	1.6e-12	33.03	RING/U-box superfamily protein	[more]
AT5G56340.1	3.5e-12	38.27	RING/U-box superfamily protein	[more]

BLAST of Csa6G008630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190528\|gb\|KGN45732.1\|	1.2e-232	100.00	hypothetical protein Csa_6G008630 [Cucumis sativus]	[more]
gi\|449441410\|ref\|XP_004138475.1\|	9.6e-153	100.00	PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus]	[more]
gi\|659081532\|ref\|XP_008441380.1\|	4.0e-151	99.27	PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo]	[more]
gi\|359486786\|ref\|XP_002283148.2\|	4.8e-128	85.51	PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Vitis vinifera]	[more]
gi\|1012333361\|gb\|KYP44757.1\|	2.4e-127	87.50	Protein goliath [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009789	positive regulation of abscisic acid-activated signaling pathway
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006301	postreplication repair
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU085138	cucumber EST collection version 3.0	transcribed_cluster
CU109709	cucumber EST collection version 3.0	transcribed_cluster
CU160342	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G008630.1	Csa6G008630.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU160342	CU160342	transcribed_cluster
CU109709	CU109709	transcribed_cluster
CU085138	CU085138	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 338..380 score: 2.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 339..379 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 339..380 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 334..382 score: 1.6
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 110..396 score: 4.6E
None	No IPR available	PANTHER	PTHR22763:SF30	E3 UBIQUITIN-PROTEIN LIGASE SDIR1	coord: 110..396 score: 4.6E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 333..386 score: 7.36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G008630	Cla006536	Watermelon (97103) v1	cuwmB533
Csa6G008630	MELO3C008223	Melon (DHL92) v3.5.1	cumeB467
Csa6G008630	ClCG11G006780	Watermelon (Charleston Gray)	cuwcgB429
Csa6G008630	Lsi03G003670	Bottle gourd (USVL1VR-Ls)	culsiB444
Csa6G008630	MELO3C008223.2	Melon (DHL92) v3.6.1	cumedB448
Csa6G008630	Cla97C11G213740	Watermelon (97103) v2	cuwmbB423
Csa6G008630	Bhi04G001953	Wax gourd	cuwgoB586
Csa6G008630	CSPI06G01130	Wild cucumber (PI 183967)	cpicuB314
Csa6G008630	Cucsa.136110	Cucumber (Gy14) v1	cgycuB195
Csa6G008630	CmaCh04G029470	Cucurbita maxima (Rimu)	cmacuB768
Csa6G008630	CmaCh15G000980	Cucurbita maxima (Rimu)	cmacuB309
Csa6G008630	CmoCh15G001070	Cucurbita moschata (Rifu)	cmocuB296
Csa6G008630	CmoCh04G030720	Cucurbita moschata (Rifu)	cmocuB759
Csa6G008630	Cp4.1LG01g25530	Cucurbita pepo (Zucchini)	cpecuB460
Csa6G008630	Cp4.1LG13g10990	Cucurbita pepo (Zucchini)	cpecuB198
Csa6G008630	CsGy6G001180	Cucumber (Gy14) v2	cgybcuB282
Csa6G008630	Carg06022	Silver-seed gourd	carcuB0023
Csa6G008630	Carg02087	Silver-seed gourd	carcuB0297

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None