Cp4.1LG13g10990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g10990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionE3 ubiquitin-protein ligase SDIR1
LocationCp4.1LG13 : 8898256 .. 8902191 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGGTCGGTTGGTTTTTGGAAGGGTATGGGCCATGGGTCGTTCGGTAACGCTCGGGAAAAGTCTAGAAATTAGAAGAAGCAAAAGCAGGCGTTAGAACATAGAATTTGACCAAATCAAAATACTACGTCGTTTTGCGCATTCAACTCCATCTCCCAAAGCCTACCTTACTAGGAAGCGAAGCCAAGCGAAACACGGGTCACATAGCAACTCAACGCGTCCGAGTCACTTCCCTCACTAGACTCGCTCCTCCATCTTCTCCGTCGCCACATACGGCTTTTCATTCTCACATAATTTTAAGATACCCCATCGCCAAAACTGTCCGATTCCAAGCAAACTCTGTCGCTTTTGGACCAACACAATCACCCCTATTTACTCGATTCTGTTCTGTAAGTCTCGGATTTCCCTCACGAAGGATTATTCTGGTTTGATTATTTGCTGATCCCTGTTCTCTTGTGCCTTAATTTCTTGGGATTCGGTTTCTAGGGTTCCTTAAATGAGTGGTTTTTATTTTTATCGTTTGAATTTCACTTGTTTAACTGTCATCATAGCTTACGGGGCTCTAAAATTGTTGCGTCTGTCTGATTCCATTCATGTTTTCGCTACATTTGACTATCTACGGGAGTTGGCTACGAATGTCGGGAATTGAGAATTTAGATGAAAAGAATTCAAAGCTGATCTGGTTCAACCGACCGATAGTTCTGATTTCGAAGTTGAGCATTTGCATTTTAGTGCAGACCTCAATCATGTCAATATTGGATGTCTGTATGCACTTCAGTTTGTGTGCAGTCATCTTTCGGTCGTTTGGTGTTCATTAGATGGCCATATGAGGGGGAATGTCACTGGATGTCTTTCCATACAATGCTGATTCATTCCTTAGAGGATATTCAGGATTGATATATTGTCTGAAGGAATCAATAAATTTGAGTTATCTAGTCTTTATGGAGCAGATGATTAGCTCATGAATGTGATTTATGCATTGAATTTGACAACTAGGAAACAATTAAGAACATGTCAATGCTTACAGATAGACCATTCTCATTGGGGCTGAGAATGATGAATGATTGGTTATGTAGAAAGGCGATGCGGGCATCATTTGATTCATTTTGTTTGTCTATTAAGATACTGGAGCCTCTTTCTTTATGAGTTCTGCAGATAATTATCATGAGTTCATCTGAATTTCATTCTGTATATTCTCGTTTCTCTGACATCAACCAGCTGTCGCAACTACTGCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAAAATGGTCTATCTGGATTTATACCTGAACGGCGTGCAATGGTATGCTCAATATTTTACACTCTCGACTTGTTAATACCAATACTTGAAAATTTATAGAACCTGCACTTGTCATGATCTTAATTTAAAATATATGGTTTTTTTGCTCCCAATCAGCGGGTTCATGCAGCACGTCCTGTTAACTCGAACTCACTTGCCTTTCTTGTCACAGGTACCATTTCACCTCTATACAGACTAACTGTTTCATGTGATAATTTTGATCTATTGCATTGTTTTAACTCCTTGACCTTGTTGCAGTCCTTTTGTTGTTCATGATGTTAAATTCTCACCAGATGTCACCGAACTTTCTGGTAAGTTTTACATTTCACACTGGATGAGCAGTAGACTGGTGTTACTCTACCCTTGATGCAAATCTTTACATTTTCTTCCTTTGAACATGCATATTTAGCTCTGGCTTGTGCTTGGTGTGTTTTTGATGGCTACAACCTTAAGGATGTATGCGACCTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGCCTTCTTGGGCACACTGAATTGAGGTTACATATGCCACCATCAATAGCACTTGCTACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGGGAATTTGATGATTTAGGTGTGGTTCAAATTTAAAAAGTTTGAGTTCGTTGTTTCTTGTAAAAGTTTTTTATGGATGATAATGTAGTAACATATTGTTTATCTTCAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGGTAATCAGCCCCATACTGTCTACAGTCCAGAAAGAATTAGGGTATCTGTTGCCTTATTCTAAGATTTGCTTGGAAGACTCATATTCTGTGGTGAAAGATTTTTCAACGATGAAATCCATGTACTTGAGCTTGCACTCATAAACTAAAGTAACGTTTTCATTAAATTATCTACAGCGACCCCTCTGTGAACCAGCAGGCTTCATCTTCAGAGTCTAATGAGGTATTTGTTAGATTTCTTTTTCCTTACGTGTTGATTCTTTTATTGCCTTAAACATGTACGTGTTCTTAAATTTTGATTGCAGAAGAGACAAGATTCAGCTAATGCAGTTGGCAGTACCAAGACCTCGGAGGATGAACTTACGTGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCGTACGTAGTCTGCCATGTTTACATCAGGTTTATCTCTATCTCCTTCTCTATCTCACCTTTTCTTCCGAACAAATGGTTGCCGATATTTCATGCTGAAAAGTCATGGACTTGGTTCAATGATCTTCCCTTAAAATCTTGATACATCTTCTATCTGCATGCATTCCTATACTTTTTTTAATTTGAATTTGGTTATACATGAATTCGATCTTGTAGTTCCATGCCAACTGCATAGATCCATGGCTGCGACAGCAGGGCACGTGCCCTGTTTGTAAATTCAGAGCGGTGTCTGGGTGGTCAGAACAGGGACAAGGGGAAACCGATGCGTATTCGGTTTGATTGAAGGCAAGGCAAGTTATCAAACTATGCTTGATGCCTGCTTAAAGCGCAGCGTATATGGACAGACATGGTGTAATTAGGATGAGGGTAGGAATTACAGGAAGTGCAATTGCCGTTTATCTTTGAACTTCTACAAGCCATTTATTAATTGTATTCTTGAAGTTGATCATTTGTTATATAGTCTCCGACCATTGCGAGTGAGCAGAATTTTTGTTCTTTCACTATCTTCCATGTAGTCCAAACCTTACCAGCAAGTGCTTGTTATATTATATCTAGAACTTCTCTTTCATGATTCTCTAATGCGTTCAAATCTCCGTCTTCACATTTAAAGTGCAAAATAATATTGTAAAAAGAAAACGATAAAAAGGGCCACTCCTGCCACTCACGCTACAATATGCAAGCATATAAATGCGTTGTCAGCTACGTATGGGCTAATCAGTGAAATTAAAAGCAAAATGCTAAGTTCAAATCCAGCATACAATCAAAATACTCAGCAGCGTGACTCGCTATTTGTAGCAGCAAATTCAAATGTATTACAAACCCATGGCTTCAAAGTTTCATCTCATTTATTTTGTTCAACTGACCTCTTGCGTTGTAGAAATGTTAAATGCAACTGGGTACCAACGTTATTTTGCTTTGTTCTTTCCCTTTCCACCCTTTTTGGCATCTAACTTGGCTTGAATGCGGGCAGCTGCCGCTGCTTTGGCTTCGTCTCTCTTCTTTTTCTCCTCCTCTTTTATTGCAGCAGTAGCCTCCCTTTGCCTTTTCAATTCTCTGATTCAACAATGTTGTAAAAAACAAATCATTATGACCAATGTGAAAAAGGTGGATCGTTGAAGTAGTGGATTACTTACTCGAGCCTGGCCCTTTCCTCCGAAACACTGCCTAGACTTGAGCCTTTCCGTGGCTTGCAGGCCACTAGTTCCACCTCGAAAATAAGAGTTGCACTGCAAGAGAGTAAGACAGTGGCTTATGAATTTATGAATTTGTCACCTAAAATTGGGGTGCACATATACAAGAGGCATTTGAATAGGAGAATCC

mRNA sequence

TCCGGTCGGTTGGTTTTTGGAAGGGTATGGGCCATGGGTCGTTCGGTAACGCTCGGGAAAAGTCTAGAAATTAGAAGAAGCAAAAGCAGGCGTTAGAACATAGAATTTGACCAAATCAAAATACTACGTCGTTTTGCGCATTCAACTCCATCTCCCAAAGCCTACCTTACTAGGAAGCGAAGCCAAGCGAAACACGGGTCACATAGCAACTCAACGCGTCCGAGTCACTTCCCTCACTAGACTCGCTCCTCCATCTTCTCCGTCGCCACATACGGCTTTTCATTCTCACATAATTTTAAGATACCCCATCGCCAAAACTGTCCGATTCCAAGCAAACTCTGTCGCTTTTGGACCAACACAATCACCCCTATTTACTCGATTCTGTTCTCTGTCGCAACTACTGCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAAAATGGTCTATCTGGATTTATACCTGAACGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCGAACTCACTTGCCTTTCTTGTCACAGTCCTTTTGTTGTTCATGATGTTAAATTCTCACCAGATGTCACCGAACTTTCTGCTCTGGCTTGTGCTTGGTGTGTTTTTGATGGCTACAACCTTAAGGATGTATGCGACCTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGCCTTCTTGGGCACACTGAATTGAGGTTACATATGCCACCATCAATAGCACTTGCTACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGGGAATTTGATGATTTAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACCCCTCTGTGAACCAGCAGGCTTCATCTTCAGAGTCTAATGAGAAGAGACAAGATTCAGCTAATGCAGTTGGCAGTACCAAGACCTCGGAGGATGAACTTACGTGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCGTACGTAGTCTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCATGGCTGCGACAGCAGGGCACGTGCCCTGTTTGTAAATTCAGAGCGGTGTCTGGGTGGTCAGAACAGGGACAAGGGGAAACCGATGCGTATTCGGTTTGATTGAAGGCAAGGCAAGTTATCAAACTATGCTTGATGCCTGCTTAAAGCGCAGCGTATATGGACAGACATGGTGTAATTAGGATGAGGGTAGGAATTACAGGAAGTGCAATTGCCGTTTATCTTTGAACTTCTACAAGCCATTTATTAATTGTATTCTTGAAGTTGATCATTTGTTATATAGTCTCCGACCATTGCGAGTGAGCAGAATTTTTGTTCTTTCACTATCTTCCATGTAGTCCAAACCTTACCAGCAAGTGCTTGTTATATTATATCTAGAACTTCTCTTTCATGATTCTCTAATGCGTTCAAATCTCCGTCTTCACATTTAAAGTGCAAAATAATATTGTAAAAAGAAAACGATAAAAAGGGCCACTCCTGCCACTCACGCTACAATATGCAAGCATATAAATGCGTTGTCAGCTACGTATGGGCTAATCAGTGAAATTAAAAGCAAAATGCTAAGTTCAAATCCAGCATACAATCAAAATACTCAGCAGCGTGACTCGCTATTTGTAGCAGCAAATTCAAATGTATTACAAACCCATGGCTTCAAAGTTTCATCTCATTTATTTTGTTCAACTGACCTCTTGCGTTGTAGAAATGTTAAATGCAACTGGGTACCAACGTTATTTTGCTTTGTTCTTTCCCTTTCCACCCTTTTTGGCATCTAACTTGGCTTGAATGCGGGCAGCTGCCGCTGCTTTGGCTTCGTCTCTCTTCTTTTTCTCCTCCTCTTTTATTGCAGCAGTAGCCTCCCTTTGCCTTTTCAATTCTCTGATTCAACAATGTTGTAAAAAACAAATCATTATGACCAATGTGAAAAAGGTGGATCGTTGAAGTAGTGGATTACTTACTCGAGCCTGGCCCTTTCCTCCGAAACACTGCCTAGACTTGAGCCTTTCCGTGGCTTGCAGGCCACTAGTTCCACCTCGAAAATAAGAGTTGCACTGCAAGAGAGTAAGACAGTGGCTTATGAATTTATGAATTTGTCACCTAAAATTGGGGTGCACATATACAAGAGGCATTTGAATAGGAGAATCC

Coding sequence (CDS)

ATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAAAATGGTCTATCTGGATTTATACCTGAACGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCGAACTCACTTGCCTTTCTTGTCACAGTCCTTTTGTTGTTCATGATGTTAAATTCTCACCAGATGTCACCGAACTTTCTGCTCTGGCTTGTGCTTGGTGTGTTTTTGATGGCTACAACCTTAAGGATGTATGCGACCTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGCCTTCTTGGGCACACTGAATTGAGGTTACATATGCCACCATCAATAGCACTTGCTACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGGGAATTTGATGATTTAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACCCCTCTGTGAACCAGCAGGCTTCATCTTCAGAGTCTAATGAGAAGAGACAAGATTCAGCTAATGCAGTTGGCAGTACCAAGACCTCGGAGGATGAACTTACGTGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCGTACGTAGTCTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCATGGCTGCGACAGCAGGGCACGTGCCCTGTTTGTAAATTCAGAGCGGTGTCTGGGTGGTCAGAACAGGGACAAGGGGAAACCGATGCGTATTCGGTTTGA

Protein sequence

MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDPSVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV
Homology
[Close]
BLAST of Cp4.1LG13g10990 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.0e-113
Identity = 221/273 (80.95%), Postives = 239/273 (87.55%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSG-FIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMS 60
           MSFVFRG+R  D+E+G SG F+PERRAMRVH ARPVNSNSLAFLVTVLLLFM+LNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 120
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 180
           GRLQGLRLQLALLDREFDDLDYETLRALDSDN  TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 181 PSVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHAN 240
            S+ +QAS+S S EK  DSAN   S K +EDELTCSVCLEQV VGE+VR+LPCLHQFHA 
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 241 CIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA 273
           CIDPWLRQQGTCPVCKFRA SGW EQ + + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]
BLAST of Cp4.1LG13g10990 vs. Swiss-Prot
Match: RNF43_HUMAN (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 1 

Query: 185 QASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANCIDPW 244
           QAS  ++  +  DS ++  S         C++CLE+ + G+ +R + CLH+FH NC+DPW
Sbjct: 249 QASCRQARGEWPDSGSSCSSAPV------CAICLEEFSEGQELRVISCLHEFHRNCVDPW 308

Query: 245 LRQQGTCPVCKFRAVSGWS-EQGQGETDAY 274
           L Q  TCP+C F    G S  Q  G + +Y
Sbjct: 309 LHQHRTCPLCMFNITEGDSFSQSLGPSRSY 332

[Close]
BLAST of Cp4.1LG13g10990 vs. Swiss-Prot
Match: RMR1_ORYSJ (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 1 

Query: 205 TKTSEDELT---CSVCLEQVNVGELVRSLPCLHQFHANCIDPWLRQQGT-CPVCKFRAVS 264
           TK  ED  T   C++CLE  NVGE +R LPC H+FHA C+D WL    T CPVCK  A +
Sbjct: 224 TKVQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDAST 283

Query: 265 GWSEQGQGET 271
           G  +    ET
Sbjct: 284 GIPDPPASET 293

[Close]
BLAST of Cp4.1LG13g10990 vs. Swiss-Prot
Match: R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.8e-10
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 1 

Query: 212 LTCSVCLEQVNVGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSG 262
           L C VC E   VGE VR LPC H FH +CI PWL Q  TCPVC+ +++SG
Sbjct: 226 LECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCR-KSLSG 274

[Close]
BLAST of Cp4.1LG13g10990 vs. Swiss-Prot
Match: RN149_HUMAN (E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.8e-10
Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 1 

Query: 210 DELTCSVCLEQVNVGELVRSLPCLHQFHANCIDPWLRQQGTCPVCK---FRAVSGWSEQG 267
           D   C+VC+E   V +++R LPC H FH  CIDPWL    TCP+CK    +A+  W E G
Sbjct: 265 DAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPG 324

[Close]
BLAST of Cp4.1LG13g10990 vs. TrEMBL
Match: E5GC70_CUCME (Protein binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 4.9e-147
Identity = 270/275 (98.18%), Postives = 272/275 (98.91%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDS NAVGSTKTSEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAY V
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]
BLAST of Cp4.1LG13g10990 vs. TrEMBL
Match: A0A0A0KBF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008630 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.6e-145
Identity = 268/275 (97.45%), Postives = 270/275 (98.18%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           SVNQQASSSES EKRQDS NAVGSTKTSEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAY V
Sbjct: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]
BLAST of Cp4.1LG13g10990 vs. TrEMBL
Match: D7TLR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01960 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 7.7e-124
Identity = 232/272 (85.29%), Postives = 245/272 (90.07%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRG+R  DIE+G  GFIPERRA+RVHAARPVN+NSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGSRA-DIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFL+WLVLG+FLMATTLRMYATCQQLQAQAQA A AASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDS+N PTTPSMSEE+INALPVHKYKV+G Q   
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGG 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           S  QQ SSS S EK+QD  NAV STK  +DELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SSMQQGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA 273
           IDPWLRQQGTCPVCKFRA  GW E GQG  DA
Sbjct: 241 IDPWLRQQGTCPVCKFRAAPGWQENGQGGMDA 271

[Close]
BLAST of Cp4.1LG13g10990 vs. TrEMBL
Match: A0A151RQE1_CAJCA (Protein goliath OS=Cajanus cajan GN=KK1_033735 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 6.5e-123
Identity = 230/269 (85.50%), Postives = 245/269 (91.08%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTR  DIENG  GFIPERRA+RVHAARP NSNSL FLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRA-DIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMAT LRMYATCQQLQAQAQA A AASG+LGHTELRLHMPPSIALA+RG
Sbjct: 61  NFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDN  T PSM+EE+INALPVHKYKVSGPQS  
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQSSS 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           S  QQASSS S EK+QD++NAVGS K S+DELTCSVCLEQVNVG+++RSLPCLHQFHANC
Sbjct: 181 SSMQQASSSASVEKKQDNSNAVGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGE 270
           IDPWLRQQGTCPVCKFRA SGW+E G  +
Sbjct: 241 IDPWLRQQGTCPVCKFRAGSGWNENGHND 268

[Close]
BLAST of Cp4.1LG13g10990 vs. TrEMBL
Match: M1CL68_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027142 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.6e-121
Identity = 228/275 (82.91%), Postives = 244/275 (88.73%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRG R  DIE G  G IPERRA+RVHA RPVN+NSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGARA-DIEPGFPGLIPERRAVRVHAGRPVNTNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVF MATTLRMYATCQQLQAQAQA A+AASGLLG TELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFFMATTLRMYATCQQLQAQAQAHAVAASGLLGPTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RL+GLRLQLALLDREFDDLDYETLRALDSD+APTTPSM+EE+INALPVHKYKVSGPQS  
Sbjct: 121 RLRGLRLQLALLDREFDDLDYETLRALDSDDAPTTPSMTEEEINALPVHKYKVSGPQSAG 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           +     SSS S EK+Q+ ANA+G TK S+DELTCSVCLEQVN GEL+RSLPCLHQFHANC
Sbjct: 181 TSTHPTSSSGSTEKKQEPANAIGGTKNSDDELTCSVCLEQVNDGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 276
           IDPWLRQ+GTCPVCKFRA S W E GQG  DAY +
Sbjct: 241 IDPWLRQRGTCPVCKFRAGSRWDENGQGGEDAYDM 274

[Close]
BLAST of Cp4.1LG13g10990 vs. TAIR10
Match: AT3G55530.1 (AT3G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 411.0 bits (1055), Expect = 5.8e-115
Identity = 221/273 (80.95%), Postives = 239/273 (87.55%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSG-FIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMS 60
           MSFVFRG+R  D+E+G SG F+PERRAMRVH ARPVNSNSLAFLVTVLLLFM+LNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 120
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 180
           GRLQGLRLQLALLDREFDDLDYETLRALDSDN  TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 181 PSVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHAN 240
            S+ +QAS+S S EK  DSAN   S K +EDELTCSVCLEQV VGE+VR+LPCLHQFHA 
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 241 CIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA 273
           CIDPWLRQQGTCPVCKFRA SGW EQ + + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]
BLAST of Cp4.1LG13g10990 vs. TAIR10
Match: AT1G04790.1 (AT1G04790.1 RING/U-box superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1 

Query: 204 STKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANCIDPWLRQQGTCPVCK 256
           + +T   + TC +CLE   +G+ +R LPCLH+FH +CIDPWL +  +CPVCK
Sbjct: 579 TVQTDNFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCK 630

[Close]
BLAST of Cp4.1LG13g10990 vs. TAIR10
Match: AT5G66070.2 (AT5G66070.2 RING/U-box superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1 

Query: 197 DSANAVGS---TKTSEDELTCSVCLEQVNVGELVRSLP-CLHQFHANCIDPWLRQQGTCP 256
           DS N +     T TS + ++CSVCL+   VGE VRSLP C H FH  CID WLR+  +CP
Sbjct: 180 DSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCP 239

[Close]
BLAST of Cp4.1LG13g10990 vs. TAIR10
Match: AT1G80400.1 (AT1G80400.1 RING/U-box superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 1 

Query: 150 DNAPTTPSMSEEQINALPVHKYKVSGPQSDPSVNQQASSSESNEKRQDSANAVGSTKT-- 209
           +N   T   + E INALPV+++K          ++  +  E +E+ +     +GS K   
Sbjct: 298 ENFSQTRGATAEAINALPVYRFK----------SKSRNDLEFSEEGEGGFLLLGSQKKRL 357

Query: 210 -SEDELTCSVCLEQVNVGELVRSLPCLHQFHANCIDPWLRQQGTCPVCK 256
            S ++ +C +CL +    E VR LPC H FH +C+D WL+   TCP+CK
Sbjct: 358 ISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396

[Close]
BLAST of Cp4.1LG13g10990 vs. TAIR10
Match: AT4G32600.1 (AT4G32600.1 RING/U-box superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 39/114 (34.21%), Postives = 57/114 (50.00%), Query Frame = 1 

Query: 161 EQINALPVHKYKVSGPQSDPSVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQ 220
           E INALP HK+K+   +S    N   + S ++E    +A        S ++  C +CL +
Sbjct: 314 ESINALPTHKFKLKKSRS----NGDDNGSSTSEGGVVAAGTDNERAISGEDAVCCICLAK 373

Query: 221 VNVGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYS 275
               E +R LPC H FH  C+D WL+   +CP+CK       SE G+  +D  S
Sbjct: 374 YANNEELRELPCSHFFHKECVDKWLKINASCPLCK-------SEVGEKNSDLTS 416

[Close]
BLAST of Cp4.1LG13g10990 vs. NCBI nr
Match: gi|659081532|ref|XP_008441380.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 7.1e-147
Identity = 270/275 (98.18%), Postives = 272/275 (98.91%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           SVNQQASSSESNEKRQDS NAVGSTKTSEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAY V
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]
BLAST of Cp4.1LG13g10990 vs. NCBI nr
Match: gi|449441410|ref|XP_004138475.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus])

HSP 1 Score: 521.9 bits (1343), Expect = 6.6e-145
Identity = 268/275 (97.45%), Postives = 270/275 (98.18%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           SVNQQASSSES EKRQDS NAVGSTKTSEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAY V
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 275

[Close]
BLAST of Cp4.1LG13g10990 vs. NCBI nr
Match: gi|700190528|gb|KGN45732.1| (hypothetical protein Csa_6G008630 [Cucumis sativus])

HSP 1 Score: 521.9 bits (1343), Expect = 6.6e-145
Identity = 268/275 (97.45%), Postives = 270/275 (98.18%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           SVNQQASSSES EKRQDS NAVGSTKTSEDELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYSV 276
           IDPWLRQQGTCPVCKFRAVSGWSEQ QGETDAY V
Sbjct: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]
BLAST of Cp4.1LG13g10990 vs. NCBI nr
Match: gi|359486786|ref|XP_002283148.2| (PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Vitis vinifera])

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-123
Identity = 232/272 (85.29%), Postives = 245/272 (90.07%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRG+R  DIE+G  GFIPERRA+RVHAARPVN+NSLAFLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGSRA-DIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFL+WLVLG+FLMATTLRMYATCQQLQAQAQA A AASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDS+N PTTPSMSEE+INALPVHKYKV+G Q   
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGG 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           S  QQ SSS S EK+QD  NAV STK  +DELTCSVCLEQVNVGEL+RSLPCLHQFHANC
Sbjct: 181 SSMQQGSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA 273
           IDPWLRQQGTCPVCKFRA  GW E GQG  DA
Sbjct: 241 IDPWLRQQGTCPVCKFRAAPGWQENGQGGMDA 271

[Close]
BLAST of Cp4.1LG13g10990 vs. NCBI nr
Match: gi|1012333361|gb|KYP44757.1| (Protein goliath [Cajanus cajan])

HSP 1 Score: 448.4 bits (1152), Expect = 9.3e-123
Identity = 230/269 (85.50%), Postives = 245/269 (91.08%), Query Frame = 1 

Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMMLNSHQMSP 60
           MSFVFRGTR  DIENG  GFIPERRA+RVHAARP NSNSL FLVTVLLLFM+LNSHQMSP
Sbjct: 1   MSFVFRGTRA-DIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120
           NFLLWLVLGVFLMAT LRMYATCQQLQAQAQA A AASG+LGHTELRLHMPPSIALA+RG
Sbjct: 61  NFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDN  T PSM+EE+INALPVHKYKVSGPQS  
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQSSS 180

Query: 181 SVNQQASSSESNEKRQDSANAVGSTKTSEDELTCSVCLEQVNVGELVRSLPCLHQFHANC 240
           S  QQASSS S EK+QD++NAVGS K S+DELTCSVCLEQVNVG+++RSLPCLHQFHANC
Sbjct: 181 SSMQQASSSASVEKKQDNSNAVGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGE 270
           IDPWLRQQGTCPVCKFRA SGW+E G  +
Sbjct: 241 IDPWLRQQGTCPVCKFRAGSGWNENGHND 268

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g10990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDIR1_ARATH1.0e-11380.95E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1[more]
RNF43_HUMAN9.6e-1137.78E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1 SV=1[more]
RMR1_ORYSJ9.6e-1150.00Receptor homology region, transmembrane domain- and RING domain-containing prote... [more]
R126A_XENLA2.8e-1058.00E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1[more]
RN149_HUMAN2.8e-1046.67E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2 SV=2[more]
BLAST of Cp4.1LG13g10990 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GC70_CUCME4.9e-14798.18Protein binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KBF9_CUCSA4.6e-14597.45Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008630 PE=4 SV=1[more]
D7TLR3_VITVI7.7e-12485.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01960 PE=4 SV=... [more]
A0A151RQE1_CAJCA6.5e-12385.50Protein goliath OS=Cajanus cajan GN=KK1_033735 PE=4 SV=1[more]
M1CL68_SOLTU3.6e-12182.91Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027142 PE=4 SV=1[more]
BLAST of Cp4.1LG13g10990 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G55530.15.8e-11580.95 RING/U-box superfamily protein[more]
AT1G04790.12.4e-1250.00 RING/U-box superfamily protein[more]
AT5G66070.22.1e-1150.79 RING/U-box superfamily protein[more]
AT1G80400.12.1e-1133.94 RING/U-box superfamily protein[more]
AT4G32600.13.5e-1134.21 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG13g10990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081532|ref|XP_008441380.1|7.1e-14798.18PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo][more]
gi|449441410|ref|XP_004138475.1|6.6e-14597.45PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus][more]
gi|700190528|gb|KGN45732.1|6.6e-14597.45hypothetical protein Csa_6G008630 [Cucumis sativus][more]
gi|359486786|ref|XP_002283148.2|1.1e-12385.29PREDICTED: E3 ubiquitin-protein ligase SDIR1 isoform X2 [Vitis vinifera][more]
gi|1012333361|gb|KYP44757.1|9.3e-12385.50Protein goliath [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0009789 positive regulation of abscisic acid-activated signaling pathway
biological_process GO:0006301 postreplication repair
biological_process GO:0016567 protein ubiquitination
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g10990.1Cp4.1LG13g10990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 213..255
score: 6.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 214..254
score: 9.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 214..255
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 209..257
score: 3.8
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 44..271
score: 1.8E
NoneNo IPR availablePANTHERPTHR22763:SF30E3 UBIQUITIN-PROTEIN LIGASE SDIR1coord: 44..271
score: 1.8E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 208..261
score: 3.24

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g10990Cucsa.136110Cucumber (Gy14) v1cgycpeB0360
Cp4.1LG13g10990CmaCh15G000980Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g10990CmaCh04G029470Cucurbita maxima (Rimu)cmacpeB705
Cp4.1LG13g10990CmoCh04G030720Cucurbita moschata (Rifu)cmocpeB657
Cp4.1LG13g10990Cla006536Watermelon (97103) v1cpewmB196
Cp4.1LG13g10990Csa6G008630Cucumber (Chinese Long) v2cpecuB198
Cp4.1LG13g10990MELO3C008223Melon (DHL92) v3.5.1cpemeB167
Cp4.1LG13g10990ClCG11G006780Watermelon (Charleston Gray)cpewcgB159
Cp4.1LG13g10990CSPI06G01130Wild cucumber (PI 183967)cpecpiB199
Cp4.1LG13g10990Lsi03G003670Bottle gourd (USVL1VR-Ls)cpelsiB143
Cp4.1LG13g10990MELO3C008223.2Melon (DHL92) v3.6.1cpemedB199
Cp4.1LG13g10990CsaV3_6G001260Cucumber (Chinese Long) v3cpecucB0238
Cp4.1LG13g10990Bhi04G001953Wax gourdcpewgoB0247
Cp4.1LG13g10990Carg06022Silver-seed gourdcarcpeB0031
Cp4.1LG13g10990Carg02087Silver-seed gourdcarcpeB0366
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g10990Cp4.1LG01g25530Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g10990Cucurbita pepo (Zucchini)cpecpeB153
Cp4.1LG13g10990Cucurbita maxima (Rimu)cmacpeB911
Cp4.1LG13g10990Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g10990Cucumber (Gy14) v2cgybcpeB741
Cp4.1LG13g10990Cucumber (Gy14) v2cgybcpeB908
Cp4.1LG13g10990Silver-seed gourdcarcpeB0019
Cp4.1LG13g10990Silver-seed gourdcarcpeB0123