Csa5G590170 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G590170
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMitotic spindle assembly checkpoint protein MAD2; contains IPR003511 (DNA-binding HORMA), IPR027097 (Mitotic spindle checkpoint protein Mad2)
LocationChr5 : 21375629 .. 21377294 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCGAAAACAGCGACCAAAGACATAATCACTCTTCGCGGTTCTGCGGCAATTGTCAGCGAGTTCTTCGGTATATTTATTGCAATTTTCTGTTTAATATGGTTGATGATTGATGAATAATATTGGCTGATTTTTTTTCCTTTTTGTTTTCTTCAATTAGGGTATGCTGCGAATAGGTATGAATACTGGGTGTTCTTTCTTTATTCTTATTTTTGTCTTTATGATCGTGTAAATTTGGAATTTTTCACTTACGAGAGATGTCGATCGTAACTGTGTAGCATCCTTTACAATCGTGGGCTTTATCCGGAGGAAAGTTTTGTTAGGGTTAAGAAATATGGACTTCCTATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTAACTGCTCAGCTTTCTGGTTAGTTCCCTTTTTCTGATTGAAAGATTTGTAACTTCTAACAGTTCAGAATTGTGTTTTTTGTTTCTTTTTTCTCTTGCAGTAGATCAGGTTGTAGTGTGATTTATACTTTCATGAGAACTGTATTTATTGGTGAGTTTTTAAATTGTGAAATTGGTTTTAGAATGGCTGGAAGCTGGGAAGTTACAAAGGGTTGTGCTCGTTATAATGAGCAAATCCAACAATGAGGTCCTTGAGAGGTGGAATTTTAGAATTGAAACTGATGGGGAGGTGGTGGAACAAGGGTAATTCAACAAAAAAACTCCTCTTCCCCCTTTCCTAAATTTAGTGATCTTGTGTTGATCAGATGACATTGTTGCAGTGTATCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCAAGCATCACCTACTTGCCCTGCCTAGATGAACCCTGTAAGTGCTGACAAAATACATCATTTTACGGATTGGTATAACATGATGTGTGATGTTGCTTGCCCACGTTCTTCTAAGTCCATAGGATGTCTTACCATTATGAAATCATTTAGCAGATCCTGTAAGTTTTTCTCCAATCATCACTTGCTCTGCTAGATGATGAGCTGTAGGGGGTTAGCAAGATTACCATGATGCTGCATTTGCTATTTTGGGGATTAGTTTCACATATGAAGCCTTATATTTTAGGCTGAGTTATGAATCAGCGGGATGTCACAATAGTTCCACCGTGAAATCGTTACTTTTTATAGATGATTTGAACATAACTTTGAATGGCTATGCATAGGTGTATCTTTCTTATGGGATTTAAGTTCAAATCATGTCCTCAATTAAGATGATTTGAACATAGCTTTGAATGGCTATGCATAGGTGTATCTTTCTTATGGGATTTAAGTTCAAATCATGTCCTCAATTAAGTGTTCTCGATGTTTTTGTTGTCTCAGGTGTATTCGATGTGTTAGCATATACTGATAAAGATCTTGCAGTTCCATTTACTTGGATGGAGAGTGACCCTAAACTGATTGCTAATCCACAAATGGTGAAGCTGCATTCTTTTGACACAAAGGTGAGAGAATGGGACTTCGTGCAAGCAAATAAGATCAAACTTATTCGTTCAACTAATCTCGATCCACTGCAAGCAAATAATTGAACTTTTAAATGGTGTGTGTATTGCAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAATGATGATGATGACGACGAGTAA

mRNA sequence

ATGGCTTCGAAAACAGCGACCAAAGACATAATCACTCTTCGCGGTTCTGCGGCAATTGTCAGCGAGTTCTTCGGGTATGCTGCGAATAGCATCCTTTACAATCGTGGGCTTTATCCGGAGGAAAGTTTTGTTAGGGTTAAGAAATATGGACTTCCTATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTAACTGCTCAGCTTTCTGAATGGCTGGAAGCTGGGAAGTTACAAAGGGTTGTGCTCGTTATAATGAGCAAATCCAACAATGAGGTCCTTGAGAGGTGGAATTTTAGAATTGAAACTGATGGGGAGGTGGTGGAACAAGGTGTATCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCAAGCATCACCTACTTGCCCTGCCTAGATGAACCCTGTGTATTCGATGTGTTAGCATATACTGATAAAGATCTTGCAGTTCCATTTACTTGGATGGAGAGTGACCCTAAACTGATTGCTAATCCACAAATGGTGAAGCTGCATTCTTTTGACACAAAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAATGATGATGATGACGACGAGTAA

Coding sequence (CDS)

ATGGCTTCGAAAACAGCGACCAAAGACATAATCACTCTTCGCGGTTCTGCGGCAATTGTCAGCGAGTTCTTCGGGTATGCTGCGAATAGCATCCTTTACAATCGTGGGCTTTATCCGGAGGAAAGTTTTGTTAGGGTTAAGAAATATGGACTTCCTATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTAACTGCTCAGCTTTCTGAATGGCTGGAAGCTGGGAAGTTACAAAGGGTTGTGCTCGTTATAATGAGCAAATCCAACAATGAGGTCCTTGAGAGGTGGAATTTTAGAATTGAAACTGATGGGGAGGTGGTGGAACAAGGTGTATCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCAAGCATCACCTACTTGCCCTGCCTAGATGAACCCTGTGTATTCGATGTGTTAGCATATACTGATAAAGATCTTGCAGTTCCATTTACTTGGATGGAGAGTGACCCTAAACTGATTGCTAATCCACAAATGGTGAAGCTGCATTCTTTTGACACAAAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAATGATGATGATGACGACGAGTAA

Protein sequence

MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEGVKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDDDDDE*
Homology
[Close]
BLAST of Csa5G590170 vs. Swiss-Prot
Match: MAD2_ARATH (Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana GN=MAD2 PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.3e-97
Identity = 178/208 (85.58%), Postives = 192/208 (92.31%), Query Frame = 1 

Query: 1   MASKTAT-KDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDE 60
           MASKTA  KDIITL GSAAIVSEFF YAANSILYNR +YPEESFV+VKKYGLPMLL +DE
Sbjct: 1   MASKTAAAKDIITLHGSAAIVSEFFCYAANSILYNRAVYPEESFVKVKKYGLPMLLIEDE 60

Query: 61  GVKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREK 120
            VK+F+SNLT+Q+SEWLEAGKLQRVVLVIMSK+  EVLERWNFRIETD EVV++GVSREK
Sbjct: 61  SVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREK 120

Query: 121 SDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQ 180
           SDKEIMREIQAIMRQ+ASS+TYLPCLDE CVFDVLAYTD D+AVPFTW+ESDPKLIANPQ
Sbjct: 121 SDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQ 180

Query: 181 MVKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           MVKLH FDTKIHKVDTLVSYKND+ D+E
Sbjct: 181 MVKLHGFDTKIHKVDTLVSYKNDEWDEE 208

[Close]
BLAST of Csa5G590170 vs. Swiss-Prot
Match: MAD2_MAIZE (Mitotic spindle checkpoint protein MAD2 OS=Zea mays GN=MAD2 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.6e-93
Identity = 171/207 (82.61%), Postives = 186/207 (89.86%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS++A+KDIITLRGSAAIVSEFFGYAANSILYNR +YPEESF +VKKYGL MLLTQDEG
Sbjct: 1   MASRSASKDIITLRGSAAIVSEFFGYAANSILYNRAVYPEESFSKVKKYGLTMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK FI++LT+QLSEWLEAGKLQR+VLVIMSK+ +EVLERWNF I TD EVVE+G  +EKS
Sbjct: 61  VKNFIASLTSQLSEWLEAGKLQRIVLVIMSKATSEVLERWNFNIVTDAEVVEKGAIKEKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIAS ITYLPCLDEPCVFDVLAYTD D+  P TW+ESD KLI NPQM
Sbjct: 121 DKEIMREIQAIMRQIASCITYLPCLDEPCVFDVLAYTDTDVDAPGTWVESDAKLIDNPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYK D+ D+E
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKKDEWDEE 207

[Close]
BLAST of Csa5G590170 vs. Swiss-Prot
Match: MD2L1_DICDI (Mitotic spindle assembly checkpoint protein MAD2A OS=Dictyostelium discoideum GN=mad2l1-1 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.9e-57
Identity = 112/205 (54.63%), Postives = 145/205 (70.73%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           M +  A+K  I+L+GS  IV+EFF Y+ N+IL+ RGLYP ESF RV KYGLP+L+T D+ 
Sbjct: 1   MQAAVASKTNISLKGSTEIVTEFFSYSINTILFQRGLYPPESFTRVAKYGLPILVTNDQS 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQG-VSREK 120
           +K ++ N+  QLSEWL +G +Q++VLVI      EVLERW F + TD  + ++G   R+K
Sbjct: 61  LKDYLDNVLKQLSEWLLSGDVQKLVLVITDIVTKEVLERWVFDVTTD--IPKEGEAPRQK 120

Query: 121 SDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQ 180
            +KEIM EIQAI+RQI +S+T+LP L   C FD+L YT KDLAVP  W ESDPK I N Q
Sbjct: 121 PEKEIMNEIQAIIRQITASVTFLPLLPNACTFDLLVYTSKDLAVPQKWEESDPKFITNSQ 180

Query: 181 MVKLHSFDTKIHKVDTLVSYKNDDD 205
            VKL SF T IHKV+++V+YK  +D
Sbjct: 181 QVKLRSFTTTIHKVESMVAYKISND 203

[Close]
BLAST of Csa5G590170 vs. Swiss-Prot
Match: MD2L1_MOUSE (Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus GN=Mad2l1 PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-53
Identity = 104/205 (50.73%), Postives = 140/205 (68.29%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MA + A +  ITLRGSA IV+EFF +  NSILY RG+YP E+F RV+KYGL +L T D  
Sbjct: 1   MAQQLAREQGITLRGSAEIVAEFFSFGINSILYQRGIYPSETFTRVQKYGLTLLTTTDPE 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           +  +++N+  QL EWL    +Q++V+VI +  + EVLERW F IE D    E+GV REKS
Sbjct: 61  LIKYLNNVVEQLKEWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKEEGVRREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
            K I  EI++++RQI +++T+LP L+  C FD+L YTDKDL VP  W ES P+ I N + 
Sbjct: 121 QKAIQDEIRSVIRQITATVTFLPLLEVSCSFDLLIYTDKDLVVPEKWEESGPQFITNCEE 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDD 206
           V+L SF T IHKV+++V+YK   +D
Sbjct: 181 VRLRSFTTTIHKVNSMVAYKTPVND 205

[Close]
BLAST of Csa5G590170 vs. Swiss-Prot
Match: MD2L1_HUMAN (Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens GN=MAD2L1 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-50
Identity = 98/200 (49.00%), Postives = 136/200 (68.00%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MA + + +  ITLRGSA IV+EFF +  NSILY RG+YP E+F RV+KYGL +L+T D  
Sbjct: 1   MALQLSREQGITLRGSAEIVAEFFSFGINSILYQRGIYPSETFTRVQKYGLTLLVTTDLE 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           +  +++N+  QL +WL    +Q++V+VI +  + EVLERW F IE D    +    REKS
Sbjct: 61  LIKYLNNVVEQLKDWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKDDSAPREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
            K I  EI++++RQI +++T+LP L+  C FD+L YTDKDL VP  W ES P+ I N + 
Sbjct: 121 QKAIQDEIRSVIRQITATVTFLPLLEVSCSFDLLIYTDKDLVVPEKWEESGPQFITNSEE 180

Query: 181 VKLHSFDTKIHKVDTLVSYK 201
           V+L SF T IHKV+++V+YK
Sbjct: 181 VRLRSFTTTIHKVNSMVAYK 200

[Close]
BLAST of Csa5G590170 vs. TrEMBL
Match: A0A0A0KPY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590170 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 6.6e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG
Sbjct: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS
Sbjct: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKNDDDDDE
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 207

[Close]
BLAST of Csa5G590170 vs. TrEMBL
Match: A0A061E776_THECC (DNA-binding HORMA family protein OS=Theobroma cacao GN=TCM_010752 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.9e-103
Identity = 190/207 (91.79%), Postives = 202/207 (97.58%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS+TA KDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESFV+VKKYGLPMLLT+DEG
Sbjct: 1   MASRTAAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK+FI+NLTAQLSEWLEAGKLQRVVLVIMSK+ NEVLERWNF IETD EVVE+GVSREKS
Sbjct: 61  VKSFITNLTAQLSEWLEAGKLQRVVLVIMSKATNEVLERWNFSIETDSEVVEKGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKD+AVPFTW+ESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKNDD D++
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDDWDEQ 207

[Close]
BLAST of Csa5G590170 vs. TrEMBL
Match: D7TAM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02430 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.8e-102
Identity = 188/207 (90.82%), Postives = 200/207 (96.62%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS+TATKDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESF +VKKYGLPMLLTQDEG
Sbjct: 1   MASRTATKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFGKVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK+FI+NLTAQLSEWLE GKLQRVVLVIMSK+ NEVLERWNF IETDGEVVE GVSREKS
Sbjct: 61  VKSFIANLTAQLSEWLETGKLQRVVLVIMSKATNEVLERWNFSIETDGEVVENGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPC+DEPCVFDVLAYTD D+AVPFTW+ESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCIDEPCVFDVLAYTDTDVAVPFTWIESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKND+ D++
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDEWDED 207

[Close]
BLAST of Csa5G590170 vs. TrEMBL
Match: A0A0D2PKM1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172500 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.2e-102
Identity = 188/207 (90.82%), Postives = 200/207 (96.62%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS+T  KDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESF +VKKYGLPMLLTQDEG
Sbjct: 1   MASRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFAKVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK+FISNLTAQLSEWLEAGKLQRVVLVIMSK+ NEVLERWNF IETD EVVE+GVSREKS
Sbjct: 61  VKSFISNLTAQLSEWLEAGKLQRVVLVIMSKATNEVLERWNFSIETDCEVVEKGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKD+AVPFTW+ESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKND+ +++
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDEWEEQ 207

[Close]
BLAST of Csa5G590170 vs. TrEMBL
Match: B9HLA6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s17970g PE=4 SV=2)

HSP 1 Score: 377.9 bits (969), Expect = 8.1e-102
Identity = 188/207 (90.82%), Postives = 199/207 (96.14%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS+T  KDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESFV+VKKYGLPMLLTQDEG
Sbjct: 61  MASRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTQDEG 120

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           V++FISNL AQLSEWLEAGKLQRVVLVIMSK+ NEVLERWNF IETD EVVEQGVSREKS
Sbjct: 121 VRSFISNLNAQLSEWLEAGKLQRVVLVIMSKATNEVLERWNFSIETDSEVVEQGVSREKS 180

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDE CVFDVLAYTDKD+AVPFTW+ESDPKLIANPQM
Sbjct: 181 DKEIMREIQAIMRQIASSITYLPCLDESCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 240

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKND+ D++
Sbjct: 241 VKLHSFDTKIHKVDTLVSYKNDEWDEQ 267

[Close]
BLAST of Csa5G590170 vs. TAIR10
Match: AT3G25980.1 (AT3G25980.1 DNA-binding HORMA family protein)

HSP 1 Score: 356.3 bits (913), Expect = 1.3e-98
Identity = 178/208 (85.58%), Postives = 192/208 (92.31%), Query Frame = 1 

Query: 1   MASKTAT-KDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDE 60
           MASKTA  KDIITL GSAAIVSEFF YAANSILYNR +YPEESFV+VKKYGLPMLL +DE
Sbjct: 1   MASKTAAAKDIITLHGSAAIVSEFFCYAANSILYNRAVYPEESFVKVKKYGLPMLLIEDE 60

Query: 61  GVKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREK 120
            VK+F+SNLT+Q+SEWLEAGKLQRVVLVIMSK+  EVLERWNFRIETD EVV++GVSREK
Sbjct: 61  SVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREK 120

Query: 121 SDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQ 180
           SDKEIMREIQAIMRQ+ASS+TYLPCLDE CVFDVLAYTD D+AVPFTW+ESDPKLIANPQ
Sbjct: 121 SDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQ 180

Query: 181 MVKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           MVKLH FDTKIHKVDTLVSYKND+ D+E
Sbjct: 181 MVKLHGFDTKIHKVDTLVSYKNDEWDEE 208

[Close]
BLAST of Csa5G590170 vs. NCBI nr
Match: gi|449435035|ref|XP_004135301.1| (PREDICTED: mitotic spindle checkpoint protein MAD2 [Cucumis sativus])

HSP 1 Score: 411.4 bits (1056), Expect = 9.5e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG
Sbjct: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS
Sbjct: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKNDDDDDE
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 207

[Close]
BLAST of Csa5G590170 vs. NCBI nr
Match: gi|659090572|ref|XP_008446088.1| (PREDICTED: mitotic spindle checkpoint protein MAD2 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 4.0e-110
Identity = 204/207 (98.55%), Postives = 206/207 (99.52%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG
Sbjct: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK+FISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS
Sbjct: 61  VKSFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKNDDD D+
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDDDGDD 207

[Close]
BLAST of Csa5G590170 vs. NCBI nr
Match: gi|590695773|ref|XP_007044984.1| (DNA-binding HORMA family protein [Theobroma cacao])

HSP 1 Score: 383.3 bits (983), Expect = 2.8e-103
Identity = 190/207 (91.79%), Postives = 202/207 (97.58%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS+TA KDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESFV+VKKYGLPMLLT+DEG
Sbjct: 1   MASRTAAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK+FI+NLTAQLSEWLEAGKLQRVVLVIMSK+ NEVLERWNF IETD EVVE+GVSREKS
Sbjct: 61  VKSFITNLTAQLSEWLEAGKLQRVVLVIMSKATNEVLERWNFSIETDSEVVEKGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKD+AVPFTW+ESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKNDD D++
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDDWDEQ 207

[Close]
BLAST of Csa5G590170 vs. NCBI nr
Match: gi|747079089|ref|XP_011086730.1| (PREDICTED: mitotic spindle checkpoint protein MAD2 [Sesamum indicum])

HSP 1 Score: 379.8 bits (974), Expect = 3.1e-102
Identity = 189/206 (91.75%), Postives = 198/206 (96.12%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESF RVKKYGLPMLLTQDEG
Sbjct: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFARVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VK+FISNLT+QLSEWLEAGKLQRVVLVIMSK+  EVLERWNF IETD EVVE+GVSREKS
Sbjct: 61  VKSFISNLTSQLSEWLEAGKLQRVVLVIMSKATGEVLERWNFSIETDSEVVEKGVSREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPC+FDVL YTDKD AVPFTW+ESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCIFDVLVYTDKDCAVPFTWVESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDD 207
           VKLHSFDTKIHKVDTLVSYKND+ D+
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDEWDE 206

[Close]
BLAST of Csa5G590170 vs. NCBI nr
Match: gi|719983726|ref|XP_010250842.1| (PREDICTED: mitotic spindle checkpoint protein MAD2 [Nelumbo nucifera])

HSP 1 Score: 379.8 bits (974), Expect = 3.1e-102
Identity = 187/207 (90.34%), Postives = 201/207 (97.10%), Query Frame = 1 

Query: 1   MASKTATKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFVRVKKYGLPMLLTQDEG 60
           MAS+T  KDIITLRGSAAIVSEFFGYAANSILYNRG+YPEESFV+VKKYGLPMLLTQDEG
Sbjct: 1   MASRTIAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTQDEG 60

Query: 61  VKTFISNLTAQLSEWLEAGKLQRVVLVIMSKSNNEVLERWNFRIETDGEVVEQGVSREKS 120
           VKTFI+NLTAQLSEWLEAGKLQRVVLVIMSK+ +EVLERWNF IETD EVVE+G+SREKS
Sbjct: 61  VKTFIANLTAQLSEWLEAGKLQRVVLVIMSKATSEVLERWNFSIETDKEVVEKGISREKS 120

Query: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWMESDPKLIANPQM 180
           DKEIMREIQAIMRQIASSITYLPCLDEPC+FDVLAYTDKD+AVPFTW+ESDPKLIANPQM
Sbjct: 121 DKEIMREIQAIMRQIASSITYLPCLDEPCIFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180

Query: 181 VKLHSFDTKIHKVDTLVSYKNDDDDDE 208
           VKLHSFDTKIHKVDTLVSYKND++ +E
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKNDEEGEE 207

The following BLAST results are available for this feature:
BLAST of Csa5G590170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MAD2_ARATH2.3e-9785.58Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana GN=MAD2 PE=1 SV=... [more]
MAD2_MAIZE2.6e-9382.61Mitotic spindle checkpoint protein MAD2 OS=Zea mays GN=MAD2 PE=2 SV=1[more]
MD2L1_DICDI3.9e-5754.63Mitotic spindle assembly checkpoint protein MAD2A OS=Dictyostelium discoideum GN... [more]
MD2L1_MOUSE2.6e-5350.73Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus GN=Mad2l1 PE=1... [more]
MD2L1_HUMAN1.6e-5049.00Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens GN=MAD2L1 PE=1... [more]
BLAST of Csa5G590170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPY5_CUCSA6.6e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590170 PE=4 SV=1[more]
A0A061E776_THECC1.9e-10391.79DNA-binding HORMA family protein OS=Theobroma cacao GN=TCM_010752 PE=4 SV=1[more]
D7TAM3_VITVI2.8e-10290.82Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02430 PE=4 SV=... [more]
A0A0D2PKM1_GOSRA6.2e-10290.82Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172500 PE=4 SV=1[more]
B9HLA6_POPTR8.1e-10290.82Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s17970g PE=4 SV=2[more]
BLAST of Csa5G590170 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25980.11.3e-9885.58 DNA-binding HORMA family protein[more]
BLAST of Csa5G590170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435035|ref|XP_004135301.1|9.5e-112100.00PREDICTED: mitotic spindle checkpoint protein MAD2 [Cucumis sativus][more]
gi|659090572|ref|XP_008446088.1|4.0e-11098.55PREDICTED: mitotic spindle checkpoint protein MAD2 [Cucumis melo][more]
gi|590695773|ref|XP_007044984.1|2.8e-10391.79DNA-binding HORMA family protein [Theobroma cacao][more]
gi|747079089|ref|XP_011086730.1|3.1e-10291.75PREDICTED: mitotic spindle checkpoint protein MAD2 [Sesamum indicum][more]
gi|719983726|ref|XP_010250842.1|3.1e-10290.34PREDICTED: mitotic spindle checkpoint protein MAD2 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
IPR027097Mad2
Vocabulary: Biological Process
TermDefinition
GO:0007094mitotic spindle assembly checkpoint
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008283 cell proliferation
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0016572 histone phosphorylation
biological_process GO:0007094 mitotic spindle assembly checkpoint
biological_process GO:0043248 proteasome assembly
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0051788 response to misfolded protein
cellular_component GO:0010369 chromocenter
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000776 kinetochore
cellular_component GO:0005828 kinetochore microtubule
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU133093cucumber EST collection version 3.0transcribed_cluster
CU136327cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G590170.1Csa5G590170.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU133093CU133093transcribed_cluster
CU136327CU136327transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainGENE3DG3DSA:3.30.900.10coord: 1..204
score: 8.3
IPR003511HORMA domainPFAMPF02301HORMAcoord: 16..191
score: 2.1
IPR003511HORMA domainPROFILEPS50815HORMAcoord: 14..197
score: 45
IPR003511HORMA domainunknownSSF56019The spindle assembly checkpoint protein mad2coord: 10..202
score: 3.27
IPR027097Mitotic spindle checkpoint protein Mad2PANTHERPTHR11842:SF11MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Acoord: 1..207
score: 2.8E
NoneNo IPR availablePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 1..207
score: 2.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G590170Cla009991Watermelon (97103) v1cuwmB401
Csa5G590170MELO3C011895Melon (DHL92) v3.5.1cumeB377
Csa5G590170ClCG05G026270Watermelon (Charleston Gray)cuwcgB394
Csa5G590170Lsi04G006510Bottle gourd (USVL1VR-Ls)culsiB368
Csa5G590170MELO3C011895.2Melon (DHL92) v3.6.1cumedB359
Csa5G590170Cla97C05G108500Watermelon (97103) v2cuwmbB383
Csa5G590170Bhi07G001502Wax gourdcuwgoB512
Csa5G590170CSPI05G21680Wild cucumber (PI 183967)cpicuB239
Csa5G590170Cucsa.075440Cucumber (Gy14) v1cgycuB073
Csa5G590170CmaCh04G018130Cucurbita maxima (Rimu)cmacuB749
Csa5G590170CmaCh18G007210Cucurbita maxima (Rimu)cmacuB413
Csa5G590170CmoCh18G007090Cucurbita moschata (Rifu)cmocuB402
Csa5G590170CmoCh04G019090Cucurbita moschata (Rifu)cmocuB739
Csa5G590170Cp4.1LG01g16090Cucurbita pepo (Zucchini)cpecuB440
Csa5G590170Cp4.1LG09g06090Cucurbita pepo (Zucchini)cpecuB047
Csa5G590170CsGy5G021200Cucumber (Gy14) v2cgybcuB223
Csa5G590170Carg14280Silver-seed gourdcarcuB0271
Csa5G590170Carg21251Silver-seed gourdcarcuB0713
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G590170Wax gourdcuwgoB489
Csa5G590170Cucumber (Chinese Long) v2cucuB064
Csa5G590170Cucumber (Gy14) v1cgycuB551
Csa5G590170Cucurbita maxima (Rimu)cmacuB189
Csa5G590170Cucurbita maxima (Rimu)cmacuB803
Csa5G590170Cucurbita moschata (Rifu)cmocuB173
Csa5G590170Cucurbita moschata (Rifu)cmocuB793
Csa5G590170Melon (DHL92) v3.5.1cumeB393
Csa5G590170Watermelon (Charleston Gray)cuwcgB411
Csa5G590170Watermelon (97103) v1cuwmB376
Csa5G590170Cucurbita pepo (Zucchini)cpecuB118
Csa5G590170Cucurbita pepo (Zucchini)cpecuB836
Csa5G590170Bottle gourd (USVL1VR-Ls)culsiB388
Csa5G590170Cucumber (Gy14) v2cgybcuB076
Csa5G590170Melon (DHL92) v3.6.1cumedB376
Csa5G590170Silver-seed gourdcarcuB0648
Csa5G590170Watermelon (97103) v2cuwmbB400