Csa5G534970 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G534970
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced protein 6B; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr5 : 18994228 .. 18996701 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAAAATAAAAAAGAATTGATACAACGAGAGTGAGAGGGATTGGTAAAGGGAAGCGTTGAGGAGTTGTGGACAATAAGAAAATAGAGAAACAGAAAAGAAAAAGGAAAGGCAGTCCGAAAGGATCGGGAGAGAGGAGAGTGGTTTTTGTAACGCTCATTCCTCTCTTCCACATAAATATCCATTCTCTTCTTTCTTCTCTCTTCGGAATTTTCTCCTTCTGCTTTTCCCCCATTCATTCATTCATCTTCCTCCTTCCAATGCCTTTTCTTCCTCACCTTTTCACCTAAATGCTCTTCTTCTTCGCCGGTATTCTTCTTCTTCTTCTTTTTTCTTTCTTTTTACGCCTAATCTATATATGTTTTTTCATCTGATTTAGCCATTTCCTTCCTTTTTCAATGTCAATATCACTTTTCATCACGCCCAGTTCCTATTTTCTCAAAGGCCTTCTATTCTCTTACTTTGTTTTTCATATCTGATTTTCATGTTTGCGTTTTTTTCTTCTTTCTTCTTGTGTTTCAGACATTACTATCCAACAAATTGGGTTTTCTCCCCTTTTCTTTTCAATGAGTTGTAGGTTTAAAGCGTAACTAGATGACGTTTTAAGCGGATGACTCTTTTTTATCTTTTTGGATTAGAGGTGGTCCTCTGGAATTTTTCGATCCATTGTTTTGACTCATTCTCATAACGGAACTTGTATCTCCTGTTCTTGATGTTGTATGTACTTTTGATCTTTTTGCTGTTTCTTGCTTTACTTTACCATTTACACAACTGTTCTATTGCCAACAATTTTTAGCTGTACATTTTGTTATCTGAAACTAGGATTGCTGGATATGATTTTAATCCTAACCTTTGAAATGGATCATTTTGGGAATTGGTGATATGTTGTAGCATTAAAATGGGAAGTTCTTTTCCTTGTTTGTTCAATCATTTGTTTGGATTTAAGTGTGTAAATGATGAGAAGTAGTGAGCTGATGAGAATTGTGTTTGTGGAATTAGACACTGTGGATTCTGTGCTGGGGTTCTGTTGAATTGTGGTGAACGTTTAGAAATGGATGAAAATGGTGGGATCAAGATGGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGGGTCACAGTATGCCCGAAATCCAAAGCAGCAGCCCATGAAAACGGAAGCCAAAATCAAAATCAAAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGATGAGGAGACTTGCCAGAGCCCTGAGCACCCACCCGATGTTCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTTATCATTCCGACCAGCTATCTTAGGCATTCGGTGTTTAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTCGATCATAGCGGCGCGCTCACTTTTCCTTGCGAAATCGAGATCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGGTTAACAACCATTTCTTTTGTTTGATGAAGTTCTTTTGGTGAATTCTTTTAGCATTATGATATGATGAACTGCACAAACATTACATTTAGAAGAAACTCGAAAATGGGGATTGGGGGCTTTGTTTGTGCAGCCATTTTGCTTACAAAATTGATGGTTAATTGACTTGGTTGAGTTCCTCAAGCTTGCCTTGTTCTATTTTGTTTTTTGAAGTTCTTGTAGTGAATTCTATTAGCATTATGATATAATGAACTGCTTGAACACTATATTTAGACGAAACTAGAAAATGGGGGCATGTGTTTGTTGTGTAGCCGTTTTGCTTACAAAGTTGATGGGTATTGACTTGAGTTCCTCAAATCTGCCAGATTATTCTCTTTTGTTTCTTGAACTTCTTGTAAGAACTCCATTAGTGTTAACCATGTTCAATTACAAATTAATTTGTTCCCTATGATTTGGAAAATATTAAAATCTAGTCCATATAATTTTAACAGTTAGAGTATAGTTCTCATGGTTTGATAAAGTCCTGATGAATAGTCCCTACCATACGTTTAATCAAACGAACTTAAAATTTTGTTCCAATCGTTTATAATTAGAACCTAGTGTTTTTCAAACTATAGGAACTTATTAATATAAAGGTCAATAACAAAATATGTATCTAGAAGAAGGTAAAATAGTTGTATTTATAGAGAAAGTTGATAATGTTTATTATGGACTTTGGTTGCAGCTGAGAGTTCGATGACTATGGAAGAATAAAAATGGTTGTGATCCACAGCAGGGGAGGGGGCTATATACAAAGACAAATTGATGTCATTGTGCCAGATTTCAGATAATGTTGTCAAATTGATGTGTTTACATTAGGGATGTGTTTAATTAGTTAGACAAAATCTGTGGAGGATGTGTGTGTCAGGCAGATTAAAAATCTACCCCTTTTTTTTCACTGTTCTTTTTTC

mRNA sequence

ATGGATGAAAATGGTGGGATCAAGATGGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGGGTCACAGTATGCCCGAAATCCAAAGCAGCAGCCCATGAAAACGGAAGCCAAAATCAAAATCAAAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGATGAGGAGACTTGCCAGAGCCCTGAGCACCCACCCGATGTTCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTTATCATTCCGACCAGCTATCTTAGGCATTCGGTGTTTAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTCGATCATAGCGGCGCGCTCACTTTTCCTTGCGAAATCGAGATCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGCTGAGAGTTCGATGACTATGGAAGAATAA

Coding sequence (CDS)

ATGGATGAAAATGGTGGGATCAAGATGGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGGGTCACAGTATGCCCGAAATCCAAAGCAGCAGCCCATGAAAACGGAAGCCAAAATCAAAATCAAAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGATGAGGAGACTTGCCAGAGCCCTGAGCACCCACCCGATGTTCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTTATCATTCCGACCAGCTATCTTAGGCATTCGGTGTTTAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTCGATCATAGCGGCGCGCTCACTTTTCCTTGCGAAATCGAGATCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGCTGAGAGTTCGATGACTATGGAAGAATAA

Protein sequence

MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRLTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE*

Homology

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BLAST of Csa5G534970 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 1


Query: 81  DVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDH-SGALTFPCEIEIFK 140
           D PKGYLAVYVG  ++RF+IP S+L   +F+ LL +AEEEFG+DH  G LT PC  ++F+
Sbjct: 24  DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQ 83

Query: 141 YLLKCMESQ 149
           ++  C+ +Q
Sbjct: 84  HITSCLSAQ 92

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BLAST of Csa5G534970 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.7e-15
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 1


Query: 81  DVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDH-SGALTFPCEIEIFK 140
           D PKGYLAVYVG +L+RF+IP SYL    F+ LL +AEEEFG+DH  G LT PC  ++F+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 141 YLLKCM 146
            +  C+
Sbjct: 76  CITSCL 81

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BLAST of Csa5G534970 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 1


Query: 81  DVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDH-SGALTFPCEIEIFK 140
           D PKGYLAVYVG +++RF+IP SY+    F+ LL +AEEEFG+DH  G LT PC  E+F+
Sbjct: 16  DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 141 YLLKCM 146
            +  C+
Sbjct: 76  RITCCL 81

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BLAST of Csa5G534970 vs. Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 1


Query: 72  TCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDH-SGALT 131
           T Q+     DVPKGY AVYVG ++RRF IP SYL    F+ LL +AEEEFG+DH  G LT
Sbjct: 16  TTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLT 75

Query: 132 FPCEIEIF 139
            PC+ E F
Sbjct: 76  IPCKEEEF 83

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BLAST of Csa5G534970 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-13
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1


Query: 74  QSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDH-SGALTFP 133
           Q+     DV KGYLAVYVG ++RRF+IP SYL    F+ LL +AEEEFG+ H +G LT P
Sbjct: 17  QASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIP 76

Query: 134 CEIEIFKYL 142
           C  ++F+++
Sbjct: 77  CSEDVFQHI 85

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BLAST of Csa5G534970 vs. TrEMBL
Match: A0A0A0KRA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G534970 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 6.6e-94
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


Query: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60
           MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL
Sbjct: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60

Query: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120
           TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE
Sbjct: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120

Query: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE
Sbjct: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 167

[Close]

BLAST of Csa5G534970 vs. TrEMBL
Match: A0A0A0LB03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346940 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.9e-89
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60
           MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL
Sbjct: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60

Query: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120
           TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE
Sbjct: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120

Query: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP 159
           FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP
Sbjct: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP 158

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BLAST of Csa5G534970 vs. TrEMBL
Match: V4TZU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009722mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.4e-56
Identity = 118/168 (70.24%), Postives = 132/168 (78.57%), Query Frame = 1


Query: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60
           MDENGG K+ GIRQIV+LKE LQ WQ VT+      ++ +  S   + NHG +SP INKR
Sbjct: 1   MDENGGSKLNGIRQIVKLKEILQKWQSVTL------SSPKPSSSQSSPNHGGISPVINKR 60

Query: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120
           L NV C DSDEE+C SPE P DVPKGYLAVYVGPELRRFIIPTSYL HS+FKVLLEKAEE
Sbjct: 61  LANVPC-DSDEESCYSPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           EFGFDH GALT PCEIE FKYLLKC+ES QKDH DD   AE ++T+EE
Sbjct: 121 EFGFDHCGALTIPCEIETFKYLLKCIESHQKDHSDD-ISAEDAVTIEE 160

[Close]

BLAST of Csa5G534970 vs. TrEMBL
Match: A0A067GEE0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044419mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.4e-56
Identity = 118/168 (70.24%), Postives = 132/168 (78.57%), Query Frame = 1


Query: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60
           MDENGG K+ GIRQIV+LKE LQ WQ VT+      ++ +  S   + NHG +SP INKR
Sbjct: 1   MDENGGSKLNGIRQIVKLKEILQKWQSVTL------SSPKPSSSQSSPNHGGISPVINKR 60

Query: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120
           L NV C DSDEE+C SPE P DVPKGYLAVYVGPELRRFIIPTSYL HS+FKVLLEKAEE
Sbjct: 61  LANVPC-DSDEESCYSPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           EFGFDH GALT PCEIE FKYLLKC+ES QKDH DD   AE ++T+EE
Sbjct: 121 EFGFDHCGALTIPCEIETFKYLLKCIESHQKDHSDD-ISAEDAVTIEE 160

[Close]

BLAST of Csa5G534970 vs. TrEMBL
Match: V4WHD0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009722mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-54
Identity = 113/156 (72.44%), Postives = 124/156 (79.49%), Query Frame = 1


Query: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60
           MDENGG K+ GIRQIV+LKE LQ WQ VT+      ++ +  S   + NHG +SP INKR
Sbjct: 1   MDENGGSKLNGIRQIVKLKEILQKWQSVTL------SSPKPSSSQSSPNHGGISPVINKR 60

Query: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120
           L NV C DSDEE+C SPE P DVPKGYLAVYVGPELRRFIIPTSYL HS+FKVLLEKAEE
Sbjct: 61  LANVPC-DSDEESCYSPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDD 156
           EFGFDH GALT PCEIE FKYLLKC+ES QKDH DD
Sbjct: 121 EFGFDHCGALTIPCEIETFKYLLKCIESHQKDHSDD 149

[Close]

BLAST of Csa5G534970 vs. TAIR10
Match: AT3G43120.1 (AT3G43120.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 211.5 bits (537), Expect = 4.1e-55
Identity = 110/169 (65.09%), Postives = 126/169 (74.56%), Query Frame = 1


Query: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60
           MDEN   K+ GI+QIVRLKE LQ WQ VT+  KS     ++G     ++  I+SP INKR
Sbjct: 1   MDENNAAKLTGIKQIVRLKEILQKWQTVTIGSKS-----DDGELGARKHTAIISPVINKR 60

Query: 61  LTNVLCCDSDEET-CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAE 120
           L ++  CDSDEET CQSPE PPDVPKGYLAVYVGPELRRFIIPT++L HS+FKVLLEKAE
Sbjct: 61  LLDLKTCDSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAE 120

Query: 121 EEFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           EE+GFDHSGALT PCE+E FKYLLKC+E    +HP D T AE  +  EE
Sbjct: 121 EEYGFDHSGALTIPCEVETFKYLLKCIE----NHPKDDTSAEDPVETEE 160

[Close]

BLAST of Csa5G534970 vs. TAIR10
Match: AT5G20810.2 (AT5G20810.2 SAUR-like auxin-responsive protein family )

HSP 1 Score: 210.3 bits (534), Expect = 9.2e-55
Identity = 112/159 (70.44%), Postives = 121/159 (76.10%), Query Frame = 1


Query: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60
           MDEN   K+ GIRQIVRLKE LQ WQ VT+ PKS+      G Q       ++SPAINKR
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAV----AMISPAINKR 60

Query: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120
           L +V   DSDEETCQSPE P DVPKG LAVYVGPELRRFIIPTSYL HS+FKVLLEKAEE
Sbjct: 61  LLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKD-HPDDHT 158
           EFGFD SGALT PCE+E FKYLLKCME+  KD HPDD++
Sbjct: 121 EFGFDQSGALTIPCEVETFKYLLKCMENNLKDLHPDDNS 155

[Close]

BLAST of Csa5G534970 vs. TAIR10
Match: AT2G24400.1 (AT2G24400.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.4 bits (241), Expect = 8.7e-21
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 1


Query: 11  IRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRLTNVLCCDSDE 70
           IR+IV+L++ L+ W+   +  K   AA+ N   N +   G  S    KR  +     +  
Sbjct: 9   IREIVKLQQLLKKWRKQAIASK---AANNNNEDNNSSGGGSKSIKFLKRTLSFTDVTA-- 68

Query: 71  ETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDHSGALT 130
                      VPKGYLAV VG E +R+ IPT YL H  F VLL +AEEEFGF  +G L 
Sbjct: 69  -----------VPKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLR 128

Query: 131 FPCEIEIFKYLLKCMESQQKDH 153
            PCE+ +F+ +LK ME + + +
Sbjct: 129 IPCEVSVFESILKIMEEKNEGY 134

[Close]

BLAST of Csa5G534970 vs. TAIR10
Match: AT4G31320.1 (AT4G31320.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 94.0 bits (232), Expect = 9.6e-20
Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 1


Query: 11  IRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRLTNVLCCDSDE 70
           IR+IV+L++ L+ W+ V    K    A+ N   N + ++  +S  IN   +         
Sbjct: 9   IREIVKLQQILKKWRKVAHASKQ---ANNNKIDNVDDSNNNISININNNGSGSGSGSKSI 68

Query: 71  ETCQSPEHPPD---VPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEEFGFDHSG 130
           +  +      D   +PKGYLAV VG E +R+ IPT YL H  F VLL +AEEEFGF+ +G
Sbjct: 69  KFLKRTLSFTDTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAG 128

Query: 131 ALTFPCEIEIFKYLLKCMESQQKD 152
            L  PCE+ +F+ +LK ME  + D
Sbjct: 129 ILRIPCEVAVFESILKIMEDNKSD 149

[Close]

BLAST of Csa5G534970 vs. TAIR10
Match: AT2G18010.1 (AT2G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 1


Query: 58  KRLTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKA 117
           +++ NV  C  ++E     + P DVPKG+  VYVGP   R+I+P S+L HS F+ LL  A
Sbjct: 28  RKMKNVNGCYYNQED----DLPQDVPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLA 87

Query: 118 EEEFGFDHSGALTFPCEIEIFKYLL 143
           EEEFGFDH   LT PC+   F+ L+
Sbjct: 88  EEEFGFDHDMGLTIPCDEVFFRSLI 108

[Close]

BLAST of Csa5G534970 vs. NCBI nr
Match: gi|778703818|ref|XP_011655433.1| (PREDICTED: uncharacterized protein LOC101207913 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 9.4e-94
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


Query: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60
           MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL
Sbjct: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60

Query: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120
           TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE
Sbjct: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120

Query: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE
Sbjct: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 167

[Close]

BLAST of Csa5G534970 vs. NCBI nr
Match: gi|659121259|ref|XP_008460570.1| (PREDICTED: uncharacterized protein LOC103499361 isoform X2 [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 1.7e-90
Identity = 162/167 (97.01%), Postives = 163/167 (97.60%), Query Frame = 1


Query: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60
           MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL
Sbjct: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60

Query: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120
           TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYL HSVFKVLLEKAEEE
Sbjct: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEE 120

Query: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           FGFDHSG LTFPCEIE FKYLLKCMESQQKD PDDHTPAESS+TMEE
Sbjct: 121 FGFDHSGGLTFPCEIETFKYLLKCMESQQKDPPDDHTPAESSLTMEE 167

[Close]

BLAST of Csa5G534970 vs. NCBI nr
Match: gi|659121257|ref|XP_008460569.1| (PREDICTED: uncharacterized protein LOC103499361 isoform X1 [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 1.7e-90
Identity = 162/167 (97.01%), Postives = 163/167 (97.60%), Query Frame = 1


Query: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60
           MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL
Sbjct: 20  MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 79

Query: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120
           TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYL HSVFKVLLEKAEEE
Sbjct: 80  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEE 139

Query: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           FGFDHSG LTFPCEIE FKYLLKCMESQQKD PDDHTPAESS+TMEE
Sbjct: 140 FGFDHSGGLTFPCEIETFKYLLKCMESQQKDPPDDHTPAESSLTMEE 186

[Close]

BLAST of Csa5G534970 vs. NCBI nr
Match: gi|778680864|ref|XP_011651409.1| (PREDICTED: uncharacterized protein LOC105434886 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 7.0e-89
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60
           MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL
Sbjct: 1   MDENGGIKMGIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKRL 60

Query: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120
           TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE
Sbjct: 61  TNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEEE 120

Query: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP 159
           FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP
Sbjct: 121 FGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTP 158

[Close]

BLAST of Csa5G534970 vs. NCBI nr
Match: gi|729345764|ref|XP_010541681.1| (PREDICTED: uncharacterized protein LOC104815072 [Tarenaya hassleriana])

HSP 1 Score: 229.6 bits (584), Expect = 4.1e-57
Identity = 119/168 (70.83%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60
           MDEN G K+ GIRQIVRLKE LQ WQ VT+  KSK+   + G++      GI+SPA++KR
Sbjct: 1   MDENNGAKLSGIRQIVRLKEILQKWQSVTI--KSKSDGPQTGARKHG---GIISPALSKR 60

Query: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120
           L +V CCDSDEETCQSPE P DVPKGYLAVYVG ELRRFIIPTSYL HS+FKVLLEKAEE
Sbjct: 61  LMDVKCCDSDEETCQSPEPPLDVPKGYLAVYVGLELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQKDHPDDHTPAESSMTMEE 168
           E+GFDHSGALT PCE+E FKYLL+CME+Q KD PDD  PAE S+  EE
Sbjct: 121 EYGFDHSGALTIPCEVETFKYLLQCMENQHKDIPDD-CPAEESIGTEE 162

The following BLAST results are available for this feature:

BLAST of Csa5G534970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARG7_VIGRR	2.3e-15	52.17	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
AX15A_SOYBN	6.7e-15	56.06	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]
AXX15_SOYBN	2.5e-14	54.55	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]
A10A5_SOYBN	1.6e-13	57.35	Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1	[more]
AX6B_SOYBN	2.8e-13	52.17	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]

BLAST of Csa5G534970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRA4_CUCSA	6.6e-94	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G534970 PE=4 SV=1	[more]
A0A0A0LB03_CUCSA	4.9e-89	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346940 PE=4 SV=1	[more]
V4TZU7_9ROSI	5.4e-56	70.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009722mg PE=4 SV=1	[more]
A0A067GEE0_CITSI	5.4e-56	70.24	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044419mg PE=4 SV=1	[more]
V4WHD0_9ROSI	1.8e-54	72.44	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009722mg PE=4 SV=1	[more]

BLAST of Csa5G534970 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43120.1	4.1e-55	65.09	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	9.2e-55	70.44	SAUR-like auxin-responsive protein family	[more]
AT2G24400.1	8.7e-21	38.73	SAUR-like auxin-responsive protein family	[more]
AT4G31320.1	9.6e-20	38.19	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	4.9e-16	47.06	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa5G534970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778703818\|ref\|XP_011655433.1\|	9.4e-94	100.00	PREDICTED: uncharacterized protein LOC101207913 [Cucumis sativus]	[more]
gi\|659121259\|ref\|XP_008460570.1\|	1.7e-90	97.01	PREDICTED: uncharacterized protein LOC103499361 isoform X2 [Cucumis melo]	[more]
gi\|659121257\|ref\|XP_008460569.1\|	1.7e-90	97.01	PREDICTED: uncharacterized protein LOC103499361 isoform X1 [Cucumis melo]	[more]
gi\|778680864\|ref\|XP_011651409.1\|	7.0e-89	100.00	PREDICTED: uncharacterized protein LOC105434886 [Cucumis sativus]	[more]
gi\|729345764\|ref\|XP_010541681.1\|	4.1e-57	70.83	PREDICTED: uncharacterized protein LOC104815072 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016043	cellular component organization
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU163119	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G534970.1	Csa5G534970.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU163119	CU163119	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 62..144 score: 4.0
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 6..161 score: 1.8
None	No IPR available	PANTHER	PTHR31374:SF22	AUXIN-RESPONSIVE PROTEIN-LIKE PROTEIN-RELATED	coord: 6..161 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G534970	Cla001873	Watermelon (97103) v1	cuwmB435
Csa5G534970	MELO3C022909	Melon (DHL92) v3.5.1	cumeB380
Csa5G534970	ClCG11G000020	Watermelon (Charleston Gray)	cuwcgB360
Csa5G534970	MELO3C022909.2	Melon (DHL92) v3.6.1	cumedB363
Csa5G534970	Cla97C11G206370	Watermelon (97103) v2	cuwmbB364
Csa5G534970	BhiUN159G48	Wax gourd	cuwgoB492
Csa5G534970	CSPI05G18840	Wild cucumber (PI 183967)	cpicuB239
Csa5G534970	Cucsa.011790	Cucumber (Gy14) v1	cgycuB286
Csa5G534970	CmaCh04G018830	Cucurbita maxima (Rimu)	cmacuB759
Csa5G534970	CmoCh04G019870	Cucurbita moschata (Rifu)	cmocuB752
Csa5G534970	CsGy5G018340	Cucumber (Gy14) v2	cgybcuB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G534970	Watermelon (Charleston Gray)	cuwcgB356
Csa5G534970	Cucurbita pepo (Zucchini)	cpecuB453
Csa5G534970	Bottle gourd (USVL1VR-Ls)	culsiB337