CmoCh04G019870 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G019870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein
Location	Cmo_Chr04 : 10292259 .. 10294258 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCGACAACTTAAGGCAGGCCGAAAGGATCGGCGGAGAGGGGTCGGTTGAGGCCATGGTTTCAGGGGAGTCCTTCTTCAACGCCCTTTCCTCTCTTCCACATAAATATTCATTCTCCTCTTTCTTCTCTCTTCGGATTACTTTCCCTCCTTCCCATTTCCCTCTGCTTCCCATTTCCTCCTCCTAATCCAAATGCCTTTTCTTCCTCACCTTTGCGCCTAAATGCTCTTCTTCTTCGCGGGTATCTTCTTTTCTTTCCCCTTTTATTACTTTTTCTTCCCATTGTTGTTGTTCGATTTGATTTGATGGAATGTAAGTTGTATTATCATCGATTTGGAATTGGAATTGGAATAGAGTTGTTTTCATCGTTTATTGTCAATCAGGTAATGTAAGATGTCGTTTTCGTTTCTCAATTTGGATGTGAGGAATGATGAGACGGACTAGGGATCTCTCGTACCTACAACTTGGCTTGTTGAATTGCTTAATCACATCTTGTGGAATGAAATGGATCCTGTTGTGATAATTGTTTCTTTATTTCTTAATTGCGTGGAGCATGCTTGTGTCTTTTCTTGTCTTCCTCCTTTGACCCATGATTTTCTCCTTAATCCGCCAACGTGGGACTCCTCTCCGCAATCTTCAACAATCATCCCATCGAACAAAATACACAATAGAGTCTCCCCTGTGGCTTTTGGAGTCCTCGAATAGCCTCTCCTTAATTGAAACTCGACCCCTTCTCTGGAGCACTAGAACAAAATACCCCACCTATTCAACAATTGAGTCATGTTTTTACTATACCTTCAAGTCTCTCAACTTCTTTGTTCAGCACTTAACGATTCTTTGTTCAACACTTAACGATTCCATTAACATGGCTAGGTTATAGACATGACTCTAATATCATGTTAGGAATCACGAATCTCCACAATAGTATGATATTGTCCACTTTGAGTATAAGTTCTCATGGTTTTGCTTTTGAAACCAAAAGGCCTCACACTTGTATTTCTTACTTATTTACGACTGATCATCCCTTTAATTAGCCATCCTCAATCAATGGTATTGATAGAATACTCTGTATGGTTGCTTTCCAACAAATGGGTTGTTCTGCATATTACTACAGTTGAGGTTTCCTTTTCAATGGGTAGGTTGAATGCATACCAAGATACATTTTTAAGCGGATGAGCGTTTTACCTCTTAGAATTGGTTGGTCTCCTCAGTTTGAGTGATTGTTTCATGCTGTAGTTTACTATTTAGAACTGTTCTATTTGTCTCTGAAATTAGACACTAAATTTTGTGCACAGGGGTTCTGTACAATTGTGGTGAACATTAAGAAATGGATGGAAATGGTGGGATGAAGTGGACTGGAATCCGCCATTTTGTGAGGCTGAAACAGACTCTCCAACACTGGCAAGCTGTCACAGTTAACCCGAAATCCCAAGCATCCAATAAAAATCAAAGCCAAAGCCAAAATCATAATCGTGGGATCCTTTCACCAGCAATCAACAAAAGGCTGATGAATGCCATGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAGCATCTATCCGATGTCCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGTAGGTTTATCATTCCCACCAGCTATCTTAGCCATTTGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTATGGATTCGATCACAGTGGTGGGCTAACACTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTACATGGAGGTTCAGCAGCTCGATGATCATCCTGATGAGCAGACCCCAGGTAAAAAAGAATCCTCAACCTTCCCATATCATCATCTTTTATCAAGTTGTTGCAGTGAATTCCATTAGCAAAGTTCATATATTATATGAATTGCATGAAGATTATATTGAGAAGAATGAGGCATTTTGGATAGAAAAATGATGCATATTTGGTTTGGTTGCTGCAGCTGAGAGTTCTTTAAGCAAGGAAGGATAA

mRNA sequence

TGTCGACAACTTAAGGCAGGCCGAAAGGATCGGCGGAGAGGGGTCGGTTGAGGCCATGGTTTCAGGGGAGTCCTTCTTCAACGCCCTTTCCTCTCTTCCACATAAATATTCATTCTCCTCTTTCTTCTCTCTTCGGATTACTTTCCCTCCTTCCCATTTCCCTCTGCTTCCCATTTCCTCCTCCTAATCCAAATGCCTTTTCTTCCTCACCTTTGCGCCTAAATGCTCTTCTTCTTCGCGGGGGTTCTGTACAATTGTGGTGAACATTAAGAAATGGATGGAAATGGTGGGATGAAGTGGACTGGAATCCGCCATTTTGTGAGGCTGAAACAGACTCTCCAACACTGGCAAGCTGTCACAGTTAACCCGAAATCCCAAGCATCCAATAAAAATCAAAGCCAAAGCCAAAATCATAATCGTGGGATCCTTTCACCAGCAATCAACAAAAGGCTGATGAATGCCATGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAGCATCTATCCGATGTCCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGTAGGTTTATCATTCCCACCAGCTATCTTAGCCATTTGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTATGGATTCGATCACAGTGGTGGGCTAACACTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTACATGGAGGTTCAGCAGCTCGATGATCATCCTGATGAGCAGACCCCAGCTGAGAGTTCTTTAAGCAAGGAAGGATAA

Coding sequence (CDS)

ATGGATGGAAATGGTGGGATGAAGTGGACTGGAATCCGCCATTTTGTGAGGCTGAAACAGACTCTCCAACACTGGCAAGCTGTCACAGTTAACCCGAAATCCCAAGCATCCAATAAAAATCAAAGCCAAAGCCAAAATCATAATCGTGGGATCCTTTCACCAGCAATCAACAAAAGGCTGATGAATGCCATGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAGCATCTATCCGATGTCCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGTAGGTTTATCATTCCCACCAGCTATCTTAGCCATTTGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTATGGATTCGATCACAGTGGTGGGCTAACACTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTACATGGAGGTTCAGCAGCTCGATGATCATCCTGATGAGCAGACCCCAGCTGAGAGTTCTTTAAGCAAGGAAGGATAA

Homology

[Close]

BLAST of CmoCh04G019870 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.7e-15
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 1


Query: 81  DVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDH-SGGLTLPCEIETFK 140
           D PKGYLAVYVG  ++RF+IP S+L+  +F+ LL +AEEE+G+DH  GGLT+PC  + F+
Sbjct: 24  DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQ 83

Query: 141 YLLKYMEVQ 149
           ++   +  Q
Sbjct: 84  HITSCLSAQ 92

[Close]

BLAST of CmoCh04G019870 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 1


Query: 80  SDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDH-SGGLTLPCEIETF 139
           +D PKGYLAVYVG +L+RF+IP SYL+   F+ LL +AEEE+G+DH  GGLT+PC  + F
Sbjct: 15  ADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVF 74

[Close]

BLAST of CmoCh04G019870 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15
Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 1


Query: 74  QSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDH-SGGLTLP 133
           Q+     DV KGYLAVYVG ++RRF+IP SYL+   F+ LL +AEEE+G+ H +GGLT+P
Sbjct: 17  QASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIP 76

Query: 134 CEIETFKYLLKYM 146
           C  + F+++  ++
Sbjct: 77  CSEDVFQHITSFL 89

[Close]

BLAST of CmoCh04G019870 vs. Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 1


Query: 81  DVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDH-SGGLTLPCEIETF 139
           DVPKGY AVYVG ++RRF IP SYL+   F+ LL +AEEE+G+DH  GGLT+PC+ E F
Sbjct: 25  DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEF 83

[Close]

BLAST of CmoCh04G019870 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 1


Query: 81  DVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDH-SGGLTLPCEIETFK 140
           D PKGYLAVYVG +++RF+IP SY++   F+ LL +AEEE+G+DH  GGLT+PC  E F+
Sbjct: 16  DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

[Close]

BLAST of CmoCh04G019870 vs. TrEMBL
Match: A0A0A0KRA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G534970 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 129/168 (76.79%), Postives = 142/168 (84.52%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQAS-NKNQSQSQNHNRGILSPAINKR 60
           MD NGG+K  GIR  VRLK+TLQHWQ VTV PKS+A+ ++N SQ+QN N GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           L N +CCDSDEE+CQSPEH  DVPKGYLAVYVGPELRRFIIPTSYL H VFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           E+GFDHSG LT PCEIE FKYLLK ME QQ  DHPD+ TPAESS++ E
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQ-KDHPDDHTPAESSMTME 166

[Close]

BLAST of CmoCh04G019870 vs. TrEMBL
Match: A0A0A0LB03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346940 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.0e-62
Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQAS-NKNQSQSQNHNRGILSPAINKR 60
           MD NGG+K  GIR  VRLK+TLQHWQ VTV PKS+A+ ++N SQ+QN N GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           L N +CCDSDEE+CQSPEH  DVPKGYLAVYVGPELRRFIIPTSYL H VFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTP 160
           E+GFDHSG LT PCEIE FKYLLK ME QQ  DHPD+ TP
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQ-KDHPDDHTP 158

[Close]

BLAST of CmoCh04G019870 vs. TrEMBL
Match: A0A059CU01_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03209 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 108/168 (64.29%), Postives = 125/168 (74.40%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRL 60
           MD NGG K TGIR  VRLK+ LQ WQ+VT+N  S+A N    + Q    G +SP +NKR+
Sbjct: 1   MDDNGGAKLTGIRQIVRLKELLQKWQSVTLN--SKADNPEPEEGQ----GNISPLVNKRI 60

Query: 61  MNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEE 120
            N  CCDSDEESC SPE  +DVPKGYLAVYVG ELRRFIIPTSYLSH +FKVLLEK EEE
Sbjct: 61  ANLQCCDSDEESCPSPEPPADVPKGYLAVYVGQELRRFIIPTSYLSHSLFKVLLEKVEEE 120

Query: 121 YGFDHSGGLTLPCEIETFKYLLKYME-VQQLDDHPDEQTPAESSLSKE 168
           +GFDHSGGLT+PCEIETFK+LLK ME  Q  +  PDE +   S  ++E
Sbjct: 121 FGFDHSGGLTIPCEIETFKFLLKCMENHQNAEPDPDESSAENSETTEE 162

[Close]

BLAST of CmoCh04G019870 vs. TrEMBL
Match: A0A059CTX6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03286 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.1e-51
Identity = 108/168 (64.29%), Postives = 125/168 (74.40%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRL 60
           MD NGG K TGIR  VRLK+ LQ WQ+VT+N  S+A N    + Q    G +SP +NKR+
Sbjct: 1   MDDNGGAKLTGIRQIVRLKELLQKWQSVTLN--SKADNPEPEEGQ----GNVSPLVNKRI 60

Query: 61  MNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEE 120
            N  CCDSDEESC SPE  +DVPKGYLAVYVG ELRRFIIPTSYLSH +FKVLLEK EEE
Sbjct: 61  ANLQCCDSDEESCPSPEPPADVPKGYLAVYVGQELRRFIIPTSYLSHSLFKVLLEKVEEE 120

Query: 121 YGFDHSGGLTLPCEIETFKYLLKYME-VQQLDDHPDEQTPAESSLSKE 168
           +GFDHSGGLT+PCEIETFK+LLK ME  Q  +  PDE +   S  ++E
Sbjct: 121 FGFDHSGGLTIPCEIETFKFLLKCMENHQNAEPDPDESSAENSETTEE 162

[Close]

BLAST of CmoCh04G019870 vs. TrEMBL
Match: V4LEI5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014872mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-49
Identity = 102/171 (59.65%), Postives = 124/171 (72.51%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQ----ASNKNQSQSQNHNRGILSPAI 60
           MD N   K TGIR  VRLK+ LQ WQ VT+ PKS+    A+ K  ++       ++SPAI
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAAE-------MISPAI 60

Query: 61  NKRLMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEK 120
           NKRL+    CDSDEE+CQSPE  +DVPKGYLAVYVGP+LRRFIIPT+YL H +FKVLLEK
Sbjct: 61  NKRLLAVKNCDSDEENCQSPEPPADVPKGYLAVYVGPDLRRFIIPTTYLGHSLFKVLLEK 120

Query: 121 AEEEYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           AEEE+GFD SG LT+PCE+ETFKYLLK ME    D HPD+ +  ++  + E
Sbjct: 121 AEEEFGFDQSGALTIPCEVETFKYLLKCMENNTKDHHPDDSSAGDTVAANE 164

[Close]

BLAST of CmoCh04G019870 vs. TAIR10
Match: AT3G43120.1 (AT3G43120.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 195.3 bits (495), Expect = 3.1e-50
Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRL 60
           MD N   K TGI+  VRLK+ LQ WQ VT+  KS   +  +  ++ H   I+SP INKRL
Sbjct: 1   MDENNAAKLTGIKQIVRLKEILQKWQTVTIGSKS---DDGELGARKHT-AIISPVINKRL 60

Query: 61  MNAMCCDSDEES-CQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           ++   CDSDEE+ CQSPE   DVPKGYLAVYVGPELRRFIIPT++LSH +FKVLLEKAEE
Sbjct: 61  LDLKTCDSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEE 120

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           EYGFDHSG LT+PCE+ETFKYLLK +E     +HP + T AE  +  E
Sbjct: 121 EYGFDHSGALTIPCEVETFKYLLKCIE-----NHPKDDTSAEDPVETE 159

[Close]

BLAST of CmoCh04G019870 vs. TAIR10
Match: AT5G20810.2 (AT5G20810.2 SAUR-like auxin-responsive protein family )

HSP 1 Score: 194.5 bits (493), Expect = 5.2e-50
Identity = 100/158 (63.29%), Postives = 115/158 (72.78%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRL 60
           MD N   K TGIR  VRLK+ LQ WQ VT+ PKS+       +       ++SPAINKRL
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAV---AMISPAINKRL 60

Query: 61  MNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEE 120
           ++    DSDEE+CQSPE   DVPKG LAVYVGPELRRFIIPTSYLSH +FKVLLEKAEEE
Sbjct: 61  LDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEE 120

Query: 121 YGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQT 159
           +GFD SG LT+PCE+ETFKYLLK ME    D HPD+ +
Sbjct: 121 FGFDQSGALTIPCEVETFKYLLKCMENNLKDLHPDDNS 155

[Close]

BLAST of CmoCh04G019870 vs. TAIR10
Match: AT2G24400.1 (AT2G24400.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-20
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1


Query: 12  IRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRLMNAMCCDSDEE 71
           IR  V+L+Q L+ W+   +   S+A+N N   + +   G  S    KR +          
Sbjct: 9   IREIVKLQQLLKKWRKQAI--ASKAANNNNEDNNSSGGGSKSIKFLKRTL---------- 68

Query: 72  SCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDHSGGLTL 131
              S   ++ VPKGYLAV VG E +R+ IPT YLSH  F VLL +AEEE+GF  +G L +
Sbjct: 69  ---SFTDVTAVPKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRI 128

Query: 132 PCEIETFKYLLKYME 147
           PCE+  F+ +LK ME
Sbjct: 129 PCEVSVFESILKIME 128

[Close]

BLAST of CmoCh04G019870 vs. TAIR10
Match: AT4G31320.1 (AT4G31320.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19
Identity = 61/162 (37.65%), Postives = 89/162 (54.94%), Query Frame = 1


Query: 12  IRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRLMNAMCCDSDEE 71
           IR  V+L+Q L+ W+ V    K   +NK  +   ++N   +S  IN    N     S  +
Sbjct: 9   IREIVKLQQILKKWRKVAHASKQANNNKIDNVDDSNNN--ISININN---NGSGSGSGSK 68

Query: 72  SCQ------SPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDH 131
           S +      S    + +PKGYLAV VG E +R+ IPT YLSH  F VLL +AEEE+GF+ 
Sbjct: 69  SIKFLKRTLSFTDTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQ 128

Query: 132 SGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           +G L +PCE+  F+ +LK ME  + D +   Q    ++ S+E
Sbjct: 129 AGILRIPCEVAVFESILKIMEDNKSDAYLTTQECRFNATSEE 165

[Close]

BLAST of CmoCh04G019870 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1


Query: 72  SCQSPEHLSDVPKGYLAVYVGPEL---RRFIIPTSYLSHLVFKVLLEKAEEEYGFDHS-G 131
           S QS +  S VPKG++AVYVG E+   +RF++P SYL+H  F+ LL +AEEE+GF+H  G
Sbjct: 11  SKQSQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIG 70

Query: 132 GLTLPCEIETFKYLL 143
           GLT+PC  ETF  LL
Sbjct: 71  GLTIPCREETFVGLL 85

[Close]

BLAST of CmoCh04G019870 vs. NCBI nr
Match: gi|659121259|ref|XP_008460570.1| (PREDICTED: uncharacterized protein LOC103499361 isoform X2 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 8.3e-66
Identity = 132/168 (78.57%), Postives = 144/168 (85.71%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQAS-NKNQSQSQNHNRGILSPAINKR 60
           MD NGG+K  GIR  VRLK+TLQHWQ VTV PKS+A+ ++N SQ+QN N GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           L N +CCDSDEE+CQSPEH  DVPKGYLAVYVGPELRRFIIPTSYLSH VFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           E+GFDHSGGLT PCEIETFKYLLK ME QQ  D PD+ TPAESSL+ E
Sbjct: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQQ-KDPPDDHTPAESSLTME 166

[Close]

BLAST of CmoCh04G019870 vs. NCBI nr
Match: gi|659121257|ref|XP_008460569.1| (PREDICTED: uncharacterized protein LOC103499361 isoform X1 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 8.3e-66
Identity = 132/168 (78.57%), Postives = 144/168 (85.71%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQAS-NKNQSQSQNHNRGILSPAINKR 60
           MD NGG+K  GIR  VRLK+TLQHWQ VTV PKS+A+ ++N SQ+QN N GILSPAINKR
Sbjct: 20  MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 79

Query: 61  LMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           L N +CCDSDEE+CQSPEH  DVPKGYLAVYVGPELRRFIIPTSYLSH VFKVLLEKAEE
Sbjct: 80  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 139

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           E+GFDHSGGLT PCEIETFKYLLK ME QQ  D PD+ TPAESSL+ E
Sbjct: 140 EFGFDHSGGLTFPCEIETFKYLLKCMESQQ-KDPPDDHTPAESSLTME 185

[Close]

BLAST of CmoCh04G019870 vs. NCBI nr
Match: gi|778703818|ref|XP_011655433.1| (PREDICTED: uncharacterized protein LOC101207913 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 9.2e-65
Identity = 129/168 (76.79%), Postives = 142/168 (84.52%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQAS-NKNQSQSQNHNRGILSPAINKR 60
           MD NGG+K  GIR  VRLK+TLQHWQ VTV PKS+A+ ++N SQ+QN N GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           L N +CCDSDEE+CQSPEH  DVPKGYLAVYVGPELRRFIIPTSYL H VFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           E+GFDHSG LT PCEIE FKYLLK ME QQ  DHPD+ TPAESS++ E
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQ-KDHPDDHTPAESSMTME 166

[Close]

BLAST of CmoCh04G019870 vs. NCBI nr
Match: gi|778680864|ref|XP_011651409.1| (PREDICTED: uncharacterized protein LOC105434886 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 4.3e-62
Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQAS-NKNQSQSQNHNRGILSPAINKR 60
           MD NGG+K  GIR  VRLK+TLQHWQ VTV PKS+A+ ++N SQ+QN N GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEE 120
           L N +CCDSDEE+CQSPEH  DVPKGYLAVYVGPELRRFIIPTSYL H VFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLRHSVFKVLLEKAEE 120

Query: 121 EYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTP 160
           E+GFDHSG LT PCEIE FKYLLK ME QQ  DHPD+ TP
Sbjct: 121 EFGFDHSGALTFPCEIEIFKYLLKCMESQQ-KDHPDDHTP 158

[Close]

BLAST of CmoCh04G019870 vs. NCBI nr
Match: gi|729345764|ref|XP_010541681.1| (PREDICTED: uncharacterized protein LOC104815072 [Tarenaya hassleriana])

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-51
Identity = 110/167 (65.87%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRL 60
           MD N G K +GIR  VRLK+ LQ WQ+VT+  KS      Q+ ++ H  GI+SPA++KRL
Sbjct: 1   MDENNGAKLSGIRQIVRLKEILQKWQSVTIKSKSDGP---QTGARKHG-GIISPALSKRL 60

Query: 61  MNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEE 120
           M+  CCDSDEE+CQSPE   DVPKGYLAVYVG ELRRFIIPTSYLSH +FKVLLEKAEEE
Sbjct: 61  MDVKCCDSDEETCQSPEPPLDVPKGYLAVYVGLELRRFIIPTSYLSHSLFKVLLEKAEEE 120

Query: 121 YGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKE 168
           YGFDHSG LT+PCE+ETFKYLL+ ME  Q  D PD+  PAE S+  E
Sbjct: 121 YGFDHSGALTIPCEVETFKYLLQCME-NQHKDIPDD-CPAEESIGTE 161

The following BLAST results are available for this feature:

BLAST of CmoCh04G019870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARG7_VIGRR	6.7e-15	50.72	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
AX15A_SOYBN	8.7e-15	59.02	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]
AX6B_SOYBN	8.7e-15	49.32	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
A10A5_SOYBN	1.9e-14	62.71	Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1	[more]
AXX15_SOYBN	1.9e-14	58.33	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]

BLAST of CmoCh04G019870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRA4_CUCSA	6.4e-65	76.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G534970 PE=4 SV=1	[more]
A0A0A0LB03_CUCSA	3.0e-62	77.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346940 PE=4 SV=1	[more]
A0A059CU01_EUCGR	2.4e-51	64.29	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03209 PE=4 SV=1	[more]
A0A059CTX6_EUCGR	3.1e-51	64.29	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03286 PE=4 SV=1	[more]
V4LEI5_EUTSA	2.2e-49	59.65	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014872mg PE=4 SV=1	[more]

BLAST of CmoCh04G019870 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43120.1	3.1e-50	60.71	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	5.2e-50	63.29	SAUR-like auxin-responsive protein family	[more]
AT2G24400.1	3.3e-20	40.74	SAUR-like auxin-responsive protein family	[more]
AT4G31320.1	2.1e-19	37.65	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	2.9e-16	56.00	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh04G019870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121259\|ref\|XP_008460570.1\|	8.3e-66	78.57	PREDICTED: uncharacterized protein LOC103499361 isoform X2 [Cucumis melo]	[more]
gi\|659121257\|ref\|XP_008460569.1\|	8.3e-66	78.57	PREDICTED: uncharacterized protein LOC103499361 isoform X1 [Cucumis melo]	[more]
gi\|778703818\|ref\|XP_011655433.1\|	9.2e-65	76.79	PREDICTED: uncharacterized protein LOC101207913 [Cucumis sativus]	[more]
gi\|778680864\|ref\|XP_011651409.1\|	4.3e-62	77.50	PREDICTED: uncharacterized protein LOC105434886 [Cucumis sativus]	[more]
gi\|729345764\|ref\|XP_010541681.1\|	2.6e-51	65.87	PREDICTED: uncharacterized protein LOC104815072 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G019870.1	CmoCh04G019870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 46..144 score: 1.3
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 6..158 score: 2.3
None	No IPR available	PANTHER	PTHR31374:SF22	AUXIN-RESPONSIVE PROTEIN-LIKE PROTEIN-RELATED	coord: 6..158 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G019870	CmaCh04G018830	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G019870	Cla001873	Watermelon (97103) v1	cmowmB733
CmoCh04G019870	Csa5G534970	Cucumber (Chinese Long) v2	cmocuB752
CmoCh04G019870	MELO3C022909	Melon (DHL92) v3.5.1	cmomeB639
CmoCh04G019870	ClCG11G000020	Watermelon (Charleston Gray)	cmowcgB629
CmoCh04G019870	CSPI05G18840	Wild cucumber (PI 183967)	cmocpiB764
CmoCh04G019870	Cp4.1LG01g16680	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G019870	MELO3C022909.2	Melon (DHL92) v3.6.1	cmomedB723
CmoCh04G019870	Cla97C11G206370	Watermelon (97103) v2	cmowmbB706
CmoCh04G019870	BhiUN159G48	Wax gourd	cmowgoB0873
CmoCh04G019870	Carg25919	Silver-seed gourd	carcmoB0317

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G019870	Wax gourd	cmowgoB0906
CmoCh04G019870	Wax gourd	cmowgoB0914
CmoCh04G019870	Bottle gourd (USVL1VR-Ls)	cmolsiB623