Csa5G353650 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G353650
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative MYB transcription factor; contains IPR009057 (Homeodomain-like)
Location	Chr5 : 13607122 .. 13611976 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAACTCTGTTGCCTTTTCGTTCTTTCAATAGGTCAGCTGCTCACAAGAGTCGAGTTCTTGTGCTGTGGAGCAAATCAACACTGAGAATCCTCTTCTACTTTACAGGTTTTTGCTACTTTTTCTCTAGACTGCTCTCTGGTTTCAACTTGCTCCAAGCTTTCTCTTTGTGTTTTCGTCTTCGTCTTCCCGAATTTGAAGTAAATTGCGGGATCTGAAGCCTTATCTGCTTCCCCAATCTGAATCTTTGTTATCGGTTGCATCTACGTGAGATAGAACAAAGTCCCAATTCCATAAATCAGTTCTGGAAACTCAGTCTTCTCTTAGATTTAGGAAACAGAAAATTTAATTGTTAGAAACCTCAATTTTGGAACACTAGCGTACAGTTGGGTGAAGCTGGTTCTTTTCTTCTTCTTCTGGTGGCTAATTCTGCTCAGCAGACTTAAACAAGGTCAGATGACTGTTGATGAAGCAGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGACAAGGCATTTGAGAATGCACTTGCAAGTCATCCCGAGGATGATTCGGATCGGTGGGAGAAAATTGCAGTCGATGTACCAGGGAAAACCATAGAAGAGATTAAACATCACTATGAGCTCTTAGTTGAGGATGTTAATCTAATTGAATCGGGTTGTGTGCCTCTCCCTTCCTATAGTTCTTCTTCAGATGGTTCAGCCAACCATGCTGGTGATGAAGGAACAACTAAGAAGAATGGTCATTTTGGGAACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCAAGGTCAGATCAAGAACGCCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGGTGAATTGACTCTTTATGTTTATGCTTCTCTCCCTCGTCCTTCTCATAGAAGCTGTGATATGGTATCTTATGAAAGTCAAAAGTTTGGTTACTGTTTTGTTAATCAGATTACTTTTGTTTCTTTCTCCTTGACACAAACATCTTGTTTTCATGGAACTAGCTACAGTCCATGAATGACACACTATATTATCATAGGCATAGCATAGTCGAGTTAGACTGGTCCTGTCCTAAACCCCTACCTGAGCTCACGGGAATGTGCTATTTCTAATGCTCTGTTAGGTATATGTCTCTGATTTCTAATGAAACACTAATTGCCTCGGTAAACCTCCTCCTGCCTAAAGTTTTCTTTATCCAATTAAAGTTACACGATACAACCATGCCTCAGGTCTCTCAAACTCAATTACTTAGAATTGATTTTTGTCCTACTTCAGACAAACAAAGGTTTAGTAGCATATTGATGACAAATAGCAGCCGTAACCCGAAGTTTTAAATGTCATGTATGTCTGTTTAGTTGTGATGCTGTCCAAAATTGCTCTCTTGTTTTTAGGTTTTGGAGTTTATTCTAATAAATTTGTACTCCCGAAATCTAGTTGGAAACATTCTTTGGGAGGGGGATCAGCTGAGTTATTGGAATAAAGTTAGTTTCTTTATGCCCTTCTTTTGAAACCACCTCCATATCTCTGTTGAAACCATCCTGCTTTTTATTGAAAATGTATGATGAGATTTTCAGTTTTATTGTGGCTAAGTCTGCTTCTTGGTTCTTCTGTGTTCCGCCAACGTGGTGTAAATTCTGATCTTTCTAGCTATAGTCGATGCAACTGAACCTAAACACATTGATGCATATGAACACTTGCATCAAGATAGTGTTTCATCAAATCCAGTAGGCCTTTTATGAGTTGTGAGAATAAAAGAATCCTGGATTTTAATGTAACGTAAAGAGTTTTCATTACAACCTGTTTCCTATATGAGTTAAATCATCCATTGACCAAAAAGTTTAAGATAGTGGGTTGTCATAAATTTAATTATGTCAAAATTTAACACTTTCCTTCACTCGTCGGCTTGCTTGAAAGTTTGTAACTGACCCAACAAATGGAGATTAATATTAAGCAAGGAGGAAATGACATAGGTTCAAACATAGAATCTCTTATTCTAATGCCATGTTAAATCACCGATTGACTCGAATTTAAGCTAGTGGGCTAAGATAAATTTAATTATTTCAACACTTCAATGTTATTCCAAATTTGTTGCATTTACTTTCAGCTCTTAGAAGATTTGTTTGTTGAGAACTCTTCATATTGCCTTCCTTTGATTGACTCAAACATCTTTATTGGAAGCTCTTTGGAAATATGTCCTGTCGAGTAATCTGATATTTGGATTTTGGATTAAATGTTAAGAACTTATTAACCACGTTATTATTTAGTGGTTCTATACGTTATTATAGTATGTGTTTGGGATACAAACTATTTTAATTTGGATAGGAAAATAAACGCTAACAAAAAAGATTTGGAAATAGTAAAATTGTAGTGTATCATAGGCTATAATAGTTGGTTTCCAACTAATAATAGTAATGTTAGCCCCAAACTAGTCCCCAATCCACTTGAAGCTGGGGGTCCAAACATCCCCTTGGGGACTTATTAGACACATTTAAAATTTTAAATGCATATGACGATTTGATGCATTCAATGTTGTGCCCAACTGACGCGTCACCGTGTGTTGAGTGCTCAAATTGTTCTTAGAAACTGGTTTAAGAACTAGTGAAACATGTTTGGTAAATCTGTTTATTCTTTTTGCCTTGTTTTAGAAAATCTGACTTATGAATAACGTTATGGTTTGTAAATGCCAAGCTTATAGCCTAAAATTTTTCTGAGGCCTTATAACGCTGGCCTTTAGAAGTTGAAGTATTTCTTTGTTCCATGTGTTTCTCTTTCTTTGTAACATCTGCCTTGAAGTTTTAAACTCCTTCATGCCTGACTACACAGATTATTTCTACTTGGTCTTGATAAATATGGGAAAGGAGACTGGCGGAGTATATCCCGAAACTTTGTTGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGGTCCAGCATCCACGATATCACCAGCGTTGCAAATGGAGATATCTCAGCGGCTCAAGGGCCAATCACGGGTCAAGCAAATGGCTCTGGAGCAGCTCCCTCTGGAAAACCAACAAAACAGCCTCCTCAATCTGCAGCTGGTCCTCCTGGTGTGGGAATGTACGGTGGTCCAACAATGGGACAGCCAGTGGGCGGTCCACTTGTCTCAGCTGTTGGCACCCCTGTCAGTCTCCCTGCTCCCGCTCATATGGCATATGGAGTCCGAGCTCCAGTGCCCGGCACAGTGGTTCCCGGTGCACCCGTAAACATGGGCCCAATGACATATCCAATGCCTCCCACATCTGCTCATAGGTAATATACAAATTATTGGATGCTGGGAATGCCATTTTGTTTTTTCTCAATCTTTCAATTATCTTCTCTAATTGGCAATGGAAATAAAGCCATAATGGAGGAAAATTTACAAGTTTCTGTATAGGCAGTAGGAAGTTAAGGAACAAAAAAAATGGTAAGCAGTTATGAATGAATAGGACATCCTCTGTTAGATCTCTCTCTCTTT

mRNA sequence

ATGACTGTTGATGAAGCAGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGACAAGGCATTTGAGAATGCACTTGCAAGTCATCCCGAGGATGATTCGGATCGGTGGGAGAAAATTGCAGTCGATGTACCAGGGAAAACCATAGAAGAGATTAAACATCACTATGAGCTCTTAGTTGAGGATGTTAATCTAATTGAATCGGGTTGTGTGCCTCTCCCTTCCTATAGTTCTTCTTCAGATGGTTCAGCCAACCATGCTGGTGATGAAGGAACAACTAAGAAGAATGGTCATTTTGGGAACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCAAGGTCAGATCAAGAACGCCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGATTATTTCTACTTGGTCTTGATAAATATGGGAAAGGAGACTGGCGGAGTATATCCCGAAACTTTGTTGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGGTCCAGCATCCACGATATCACCAGCGTTGCAAATGGAGATATCTCAGCGGCTCAAGGGCCAATCACGGGTCAAGCAAATGGCTCTGGAGCAGCTCCCTCTGGAAAACCAACAAAACAGCCTCCTCAATCTGCAGCTGGTCCTCCTGGTGTGGGAATGTACGGTGGTCCAACAATGGGACAGCCAGTGGGCGGTCCACTTGTCTCAGCTGTTGGCACCCCTGTCAGTCTCCCTGCTCCCGCTCATATGGCATATGGAGTCCGAGCTCCAGTGCCCGGCACAGTGGTTCCCGGTGCACCCGTAAACATGGGCCCAATGACATATCCAATGCCTCCCACATCTGCTCATAGGTAA

Coding sequence (CDS)

ATGACTGTTGATGAAGCAGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGACAAGGCATTTGAGAATGCACTTGCAAGTCATCCCGAGGATGATTCGGATCGGTGGGAGAAAATTGCAGTCGATGTACCAGGGAAAACCATAGAAGAGATTAAACATCACTATGAGCTCTTAGTTGAGGATGTTAATCTAATTGAATCGGGTTGTGTGCCTCTCCCTTCCTATAGTTCTTCTTCAGATGGTTCAGCCAACCATGCTGGTGATGAAGGAACAACTAAGAAGAATGGTCATTTTGGGAACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCAAGGTCAGATCAAGAACGCCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGATTATTTCTACTTGGTCTTGATAAATATGGGAAAGGAGACTGGCGGAGTATATCCCGAAACTTTGTTGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGGTCCAGCATCCACGATATCACCAGCGTTGCAAATGGAGATATCTCAGCGGCTCAAGGGCCAATCACGGGTCAAGCAAATGGCTCTGGAGCAGCTCCCTCTGGAAAACCAACAAAACAGCCTCCTCAATCTGCAGCTGGTCCTCCTGGTGTGGGAATGTACGGTGGTCCAACAATGGGACAGCCAGTGGGCGGTCCACTTGTCTCAGCTGTTGGCACCCCTGTCAGTCTCCCTGCTCCCGCTCATATGGCATATGGAGTCCGAGCTCCAGTGCCCGGCACAGTGGTTCCCGGTGCACCCGTAAACATGGGCCCAATGACATATCCAATGCCTCCCACATCTGCTCATAGGTAA

Protein sequence

MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR*

Homology

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BLAST of Csa5G353650 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 104/222 (46.85%), Postives = 141/222 (63.51%), Query Frame = 1


Query: 3   VDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVN 62
           ++E+ S++ W+  ++KAFENALA   E+  +RWE++A  VPGKT+ ++   Y+ L +DV+
Sbjct: 17  LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76

Query: 63  LIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIA 122
            IE+G VP+P YS+SS  +       G       +G     S+ G     S+QER+KG+ 
Sbjct: 77  SIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRP---SEQERKKGVP 136

Query: 123 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSI 182
           WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  K++RR+SI
Sbjct: 137 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASI 196

Query: 183 HDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAA 225
           HDIT+V   D            N + +  + KP   P  S A
Sbjct: 197 HDITTVNLSD------------NQTPSPDNKKPPSSPDHSMA 223

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BLAST of Csa5G353650 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 1


Query: 71  LPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIAWTEDEHRL 130
           L  Y   +  + N+ GD   + K           +     S S +ER++G+ WTE+EH+L
Sbjct: 45  LSQYEHPNANNNNNGGDNNESSKVAQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKL 104

Query: 131 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDITS 188
           FLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R +++N+ RRRSS+ DIT+
Sbjct: 105 FLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITT 161

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BLAST of Csa5G353650 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.3e-16
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 1


Query: 8  SSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESG 67
          SS  W+ +Q+KAFE ALA++ +D  +RW+ +A  V GKT EE+K HYELLV+D+N IE+G
Sbjct: 10 SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENG 69

Query: 68 CVPLPSYSSSSDGSANHAGDEGTTKKN 95
           VP P+Y +S   +      E    +N
Sbjct: 70 HVPFPNYRTSGGCTNGRLSQEEKRMRN 96

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BLAST of Csa5G353650 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-14
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1


Query: 7  GSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIES 66
          GS   WS +++KAFE ALA + +D  DRW  +A  V G+T EE+K HYE+LVED+  IES
Sbjct: 6  GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIES 65

Query: 67 GCVPLPSYSSS 78
          G VP P+Y ++
Sbjct: 66 GKVPFPNYRTT 76

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BLAST of Csa5G353650 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.6e-14
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 1  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
          M  +   S S W+  Q+K FE ALA + +D  DRW  +A  V GKT+EE+K HY++LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNLIESGCVPLPSYSSSSDGS 82
          +  IE+G VPLP+Y +    S
Sbjct: 61 LINIETGRVPLPNYKTFESNS 81

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BLAST of Csa5G353650 vs. TrEMBL
Match: A0A0A0KTA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G353650 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 1.4e-171
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP
Sbjct: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Csa5G353650 vs. TrEMBL
Match: B9HGD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2)

HSP 1 Score: 509.6 bits (1311), Expect = 2.5e-141
Identity = 243/296 (82.09%), Postives = 264/296 (89.19%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           M+VDE GS SLW+ E DKAFENALA++PED SDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           +N IE+GCVPLP YSSSS+GS +HAGDEGT KK GH G+ N +SNHG+K SRSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSG-AAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQ 240
           SIHDITSV NGDI+  QGPITGQ NGS  A  SGK  KQPP   AGPPGVG+YG PT+GQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 241 PVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           P+GGPLVSAVGTPV+L APAHMAYGVRAPVPG +VPGAP+NMGPMTYPMPPT+ HR
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTYPMPPTTTHR 296

[Close]

BLAST of Csa5G353650 vs. TrEMBL
Match: A0A067G2J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 3.3e-141
Identity = 249/298 (83.56%), Postives = 270/298 (90.60%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIA DVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTT--KKNGHFGNCNGDSNHGSKTSRSDQERR 120
           VN IESGCVPLPSY+SSSDGS +HAGDEGT+  KK GH+G+ N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 180
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVANGDISAAQGPITGQANGS-GAAPSGKPTKQPPQSAAGPPGVGMYGGPTM 240
           RSSIHDITSV NGDISA QGPITGQ NGS G   SGK +KQPPQ +AGPPGVGMYG PTM
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           GQP+GGPLVSAVGTPV+LPAPAHMAYGVRAPVPGTVVPGAP+N+ PM YPMP  SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Csa5G353650 vs. TrEMBL
Match: V4VEK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 2.8e-140
Identity = 248/298 (83.22%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIA DVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTT--KKNGHFGNCNGDSNHGSKTSRSDQERR 120
           VN IESGCVPLPSY+SSSDGS +HAGDEGT+  KK GH+G+ N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 180
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVANGDISAAQGPITGQANGS-GAAPSGKPTKQPPQSAAGPPGVGMYGGPTM 240
           RSSIHDITSV NGDISA QGPITGQ NGS G   SGK +KQPPQ +AGPPGVGMYG PTM
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           GQP+GGPLVSAVGTPV+LPAPAHMAYGVRA VPGTVVPGAP+N+ PM YPMP  SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Csa5G353650 vs. TrEMBL
Match: B9H5N1_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s08990g PE=4 SV=2)

HSP 1 Score: 504.2 bits (1297), Expect = 1.1e-139
Identity = 239/295 (81.02%), Postives = 263/295 (89.15%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           M+V+E GS SLW+ EQDKAFENALA++PED SD WEKI  DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVNEGGSGSLWTKEQDKAFENALATYPEDTSDWWEKITADVPGKTVEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           ++ IE+GCVPLP+YSSSS+GS +HA DEGT KK GH G+ N DSN+G+K SRSDQERRKG
Sbjct: 61  ISQIEAGCVPLPNYSSSSEGSTSHAIDEGTGKKGGHLGHHNSDSNNGNKASRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSV NGD++A QGPITGQ NGS A  SGK  KQPP    GPPGVG+YG PT+GQP
Sbjct: 181 SIHDITSVGNGDVAAPQGPITGQTNGSAAGSSGKAAKQPPAQPVGPPGVGIYGPPTIGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           +GGPLVSAVGTPV+LPAPAHMAYGVRAPVPGTVVPGAP+NM PMTYPMP T+ HR
Sbjct: 241 IGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMVPMTYPMPHTTTHR 295

[Close]

BLAST of Csa5G353650 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 377.5 bits (968), Expect = 7.6e-105
Identity = 203/309 (65.70%), Postives = 228/309 (73.79%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTV+E    S+WS E D AFE ALA++ ++  +RWEKIA DVPGK++E+IK HYELLVED
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCN-GDSNHGSKTSRSDQERRK 120
           V  IESGCVPLP+Y S  +GS  HAGDEG + K G  GN + G+SN   K S+SDQERRK
Sbjct: 61  VTRIESGCVPLPAYGSP-EGSNGHAGDEGASSKKG--GNSHAGESNQAGK-SKSDQERRK 120

Query: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRR 180
           GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRR
Sbjct: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITSVANGDISAAQGPITGQ----------ANGSGAAPSGKPTKQPPQSAA-GPPG 240
           SSIHDITSV N D+S  QGPITGQ           N S  A +G   K   Q+ +  PPG
Sbjct: 181 SSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPG 240

Query: 241 VGMYGGPTMGQPVGGPLVSAVGTPVSLPAPAHMAYGVR-APVPGTVVPGAPVNMGPMTYP 296
             MYG P +GQP       AVGTPV+LPAP HMAYGV  APVPG+VVPGA +N+G M Y 
Sbjct: 241 PPMYGTPAIGQP-------AVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYT 298

[Close]

BLAST of Csa5G353650 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-68
Identity = 151/307 (49.19%), Postives = 191/307 (62.21%), Query Frame = 1


Query: 12  WSLEQDKAFENALASH---PEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESGC 71
           WS E++KAFENA+A H    E   D+W K++  VP K +EE+K HY++L+EDV  IE+G 
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 72  VPLPSY-----------SSSSDGSANH-AGDEGTTKKNGHFGNCNGDSNHGSKT--SRSD 131
           VPLP Y           ++++   AN  +   G+++K  + G     S++G ++  SR++
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127

Query: 132 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN 191
           QERRKGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSMN
Sbjct: 128 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 187

Query: 192 KERRRSSIHDITSVANGDISAAQGPITGQ-ANGSGAAPSGKPTKQPPQSAAGPP---GVG 251
           ++RRRSSIHDIT+V N   +   G    Q      A P  +P  QP Q    PP   G+G
Sbjct: 188 RDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQH--HPPTMAGLG 247

Query: 252 MYGGPTMGQPVGGP---LVSAVGTPVSLPAPA---HMAYGVRAPVPGTVVPGAPVNMGPM 292
           MYGG  +GQP+  P   + SAVGTPV LP P    H  +     V    VP  PV   P 
Sbjct: 248 MYGGAPVGQPIIAPPDHMGSAVGTPVMLPPPMGTHHHHHHHHLGVAPYAVPAYPVPPLPQ 307

[Close]

BLAST of Csa5G353650 vs. TAIR10
Match: AT2G38090.1 (AT2G38090.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-49
Identity = 101/207 (48.79%), Postives = 132/207 (63.77%), Query Frame = 1


Query: 12  WSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESGCVPL 71
           W+ E++K FENALA + +D  DRW ++A  +PGKT+ ++   Y  L EDV+ IE+G +P+
Sbjct: 29  WTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLIPI 88

Query: 72  PSYSSSSDGSANHAGDEGTTKKNGHFGNCNG------DSNHGSKTSRSDQERRKGIAWTE 131
           P Y+S S  + +  G +G +  NG   N NG          GS    ++ ER+KG+ WTE
Sbjct: 89  PGYASDSF-TLDWGGYDGASGNNGF--NMNGYYFSAAGGKRGSAARTAEHERKKGVPWTE 148

Query: 132 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDI 191
           +EHR FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR  +  K++RRSSIHDI
Sbjct: 149 EEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSIHDI 208

Query: 192 TSVANGDISAAQGPITGQANGSGAAPS 213
           T+V   D   A       AN   + PS
Sbjct: 209 TTVNIPDSPDAAAADNATANAPCSPPS 232

[Close]

BLAST of Csa5G353650 vs. TAIR10
Match: AT5G23650.1 (AT5G23650.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-49
Identity = 109/216 (50.46%), Postives = 133/216 (61.57%), Query Frame = 1


Query: 5   EAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLI 64
           E    S WS + D AFE ALA + +    RW+KIA  VPGKT+E++  HY +L  DV LI
Sbjct: 6   EISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLI 65

Query: 65  ESGCVPLPSYSSSSDGSANHA-GDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIAW 124
           ESGCV LP Y    +   ++A G E +  + G+  +   +S H  K S+  Q+RR+G+ W
Sbjct: 66  ESGCVRLPDYDDFLEEPNHNAFGKERSILEGGN--DRKYESKHKGK-SKLKQKRRRGVPW 125

Query: 125 TEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIH 184
              EHR FL GL KYGKGDWRSISR+ VVTRT TQVASHAQKYF  +NS +K+R+R SIH
Sbjct: 126 KPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSIH 185

Query: 185 DITSVANGDISAAQGPITGQ-ANGSGAAPSGKPTKQ 219
           DIT   N  IS  Q PIT Q  N +GA  S     Q
Sbjct: 186 DITIAENKSISTKQRPITWQKINNNGATASNTQANQ 218

[Close]

BLAST of Csa5G353650 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-49
Identity = 97/188 (51.60%), Postives = 128/188 (68.09%), Query Frame = 1


Query: 3   VDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVN 62
           V  +G  + W+  ++KAFENALA + ++  DRW+K+A  +PGKT+ ++   Y  L  DV+
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 63  LIESGCVPLPSYSSSSDGSANHAGDEGTTK--KNGHFGNCNGDSNHGSKTSRSDQERRKG 122
            IE+G +P+P Y +S   + + AG  G     K GH   CN  S  G      + ER+KG
Sbjct: 85  SIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGH-QVCNKRSQAGRSP---ELERKKG 144

Query: 123 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 182
           + WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  K++RR+
Sbjct: 145 VPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRA 204

Query: 183 SIHDITSV 189
           SIHDIT+V
Sbjct: 205 SIHDITTV 208

[Close]

BLAST of Csa5G353650 vs. NCBI nr
Match: gi|449464296|ref|XP_004149865.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus])

HSP 1 Score: 610.1 bits (1572), Expect = 2.0e-171
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP
Sbjct: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Csa5G353650 vs. NCBI nr
Match: gi|659072320|ref|XP_008465139.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis melo])

HSP 1 Score: 606.3 bits (1562), Expect = 2.9e-170
Identity = 292/295 (98.98%), Postives = 293/295 (99.32%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKT+EEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTVEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQE RKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQEHRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSVANGDISA QGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP
Sbjct: 181 SIHDITSVANGDISATQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Csa5G353650 vs. NCBI nr
Match: gi|566180022|ref|XP_006380485.1| (hypothetical protein POPTR_0007s07150g [Populus trichocarpa])

HSP 1 Score: 509.6 bits (1311), Expect = 3.7e-141
Identity = 243/296 (82.09%), Postives = 264/296 (89.19%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           M+VDE GS SLW+ E DKAFENALA++PED SDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           +N IE+GCVPLP YSSSS+GS +HAGDEGT KK GH G+ N +SNHG+K SRSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSG-AAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQ 240
           SIHDITSV NGDI+  QGPITGQ NGS  A  SGK  KQPP   AGPPGVG+YG PT+GQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 241 PVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           P+GGPLVSAVGTPV+L APAHMAYGVRAPVPG +VPGAP+NMGPMTYPMPPT+ HR
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTYPMPPTTTHR 296

[Close]

BLAST of Csa5G353650 vs. NCBI nr
Match: gi|641851056|gb|KDO69927.1| (hypothetical protein CISIN_1g022439mg [Citrus sinensis])

HSP 1 Score: 509.2 bits (1310), Expect = 4.8e-141
Identity = 249/298 (83.56%), Postives = 270/298 (90.60%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIA DVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTT--KKNGHFGNCNGDSNHGSKTSRSDQERR 120
           VN IESGCVPLPSY+SSSDGS +HAGDEGT+  KK GH+G+ N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 180
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVANGDISAAQGPITGQANGS-GAAPSGKPTKQPPQSAAGPPGVGMYGGPTM 240
           RSSIHDITSV NGDISA QGPITGQ NGS G   SGK +KQPPQ +AGPPGVGMYG PTM
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           GQP+GGPLVSAVGTPV+LPAPAHMAYGVRAPVPGTVVPGAP+N+ PM YPMP  SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Csa5G353650 vs. NCBI nr
Match: gi|1009138875|ref|XP_015886818.1| (PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba])

HSP 1 Score: 507.7 bits (1306), Expect = 1.4e-140
Identity = 243/295 (82.37%), Postives = 261/295 (88.47%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSSLW+ EQDKAFENALA+HPED SD WEKIA DVPGKT+EE+KHHYELL ED
Sbjct: 1   MTVDEEGSSSLWTREQDKAFENALATHPEDASDWWEKIAADVPGKTLEEVKHHYELLAED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           V  IESGCVPLP Y+SSS+GS +HAGDEGT KK GH GN + +SNHGSKTSRSDQERRKG
Sbjct: 61  VKQIESGCVPLPCYNSSSEGSTSHAGDEGTGKKGGHTGNYSSESNHGSKTSRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSV N DIS AQGPITGQANGS    + K TKQPPQ  AGPPGVGMYG PT+GQP
Sbjct: 181 SIHDITSVGNTDISGAQGPITGQANGSAGGSASKSTKQPPQPPAGPPGVGMYGAPTIGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPV+LP+  H+AYGVRAPV G +VPGAP+NMGPM YPMP T+ HR
Sbjct: 241 VGGPLVSAVGTPVNLPSAPHIAYGVRAPVAGAMVPGAPMNMGPMPYPMPHTTTHR 295

The following BLAST results are available for this feature:

BLAST of Csa5G353650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DIV_ANTMA	1.1e-49	46.85	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MY1R1_SOLTU	1.6e-27	51.28	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
RADL1_ARATH	6.3e-16	45.98	Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1	[more]
RAD_ANTMA	2.0e-14	52.11	Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1	[more]
RADL6_ARATH	2.6e-14	46.91	Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1	[more]

BLAST of Csa5G353650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTA8_CUCSA	1.4e-171	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G353650 PE=4 SV=1	[more]
B9HGD2_POPTR	2.5e-141	82.09	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2	[more]
A0A067G2J5_CITSI	3.3e-141	83.56	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1	[more]
V4VEK0_9ROSI	2.8e-140	83.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1	[more]
B9H5N1_POPTR	1.1e-139	81.02	Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0...	[more]

BLAST of Csa5G353650 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08520.1	7.6e-105	65.70	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	1.5e-68	49.19	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	1.6e-49	48.79	Duplicated homeodomain-like superfamily protein	[more]
AT5G23650.1	4.6e-49	50.46	Homeodomain-like transcriptional regulator	[more]
AT5G58900.1	7.8e-49	51.60	Homeodomain-like transcriptional regulator	[more]

BLAST of Csa5G353650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464296\|ref\|XP_004149865.1\|	2.0e-171	100.00	PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus]	[more]
gi\|659072320\|ref\|XP_008465139.1\|	2.9e-170	98.98	PREDICTED: transcription factor DIVARICATA-like [Cucumis melo]	[more]
gi\|566180022\|ref\|XP_006380485.1\|	3.7e-141	82.09	hypothetical protein POPTR_0007s07150g [Populus trichocarpa]	[more]
gi\|641851056\|gb\|KDO69927.1\|	4.8e-141	83.56	hypothetical protein CISIN_1g022439mg [Citrus sinensis]	[more]
gi\|1009138875\|ref\|XP_015886818.1\|	1.4e-140	82.37	PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003677	DNA binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU092804	cucumber EST collection version 3.0	transcribed_cluster
CU121364	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G353650.3	Csa5G353650.3	mRNA
Csa5G353650.2	Csa5G353650.2	mRNA
Csa5G353650.1	Csa5G353650.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU092804	CU092804	transcribed_cluster
CU121364	CU121364	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..55 score: 2.0E-8coord: 122..166 score: 2.7
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 119..169 score: 3.2E-10coord: 8..60 score: 2.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 119..169 score: 2.6
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 122..165 score: 1.4E-10coord: 11..55 score: 4.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 10..66 score: 8.61E-10coord: 117..172 score: 1.27
IPR017877	Myb-like domain	PROFILE	PS50090	MYB_LIKE	coord: 12..58 score: 6
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 114..171 score: 17
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 4..208 score: 2.5E-185coord: 228..295 score: 2.5E
None	No IPR available	PANTHER	PTHR24078:SF279	DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN	coord: 4..208 score: 2.5E-185coord: 228..295 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G353650	Cla009078	Watermelon (97103) v1	cuwmB421
Csa5G353650	MELO3C005072	Melon (DHL92) v3.5.1	cumeB356
Csa5G353650	ClCG01G008050	Watermelon (Charleston Gray)	cuwcgB377
Csa5G353650	Lsi09G008540	Bottle gourd (USVL1VR-Ls)	culsiB331
Csa5G353650	MELO3C005072.2	Melon (DHL92) v3.6.1	cumedB332
Csa5G353650	CSPI05G13890	Wild cucumber (PI 183967)	cpicuB239
Csa5G353650	Cucsa.013870	Cucumber (Gy14) v1	cgycuB310
Csa5G353650	CmaCh04G022380	Cucurbita maxima (Rimu)	cmacuB761
Csa5G353650	CmoCh04G023390	Cucurbita moschata (Rifu)	cmocuB748
Csa5G353650	Cp4.1LG01g19420	Cucurbita pepo (Zucchini)	cpecuB454
Csa5G353650	CsGy5G013750	Cucumber (Gy14) v2	cgybcuB223
Csa5G353650	Carg17772	Silver-seed gourd	carcuB0512

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None