Cp4.1LG01g19420 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g19420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Myb family transcription factor family protein
Location	Cp4.1LG01 : 16562583 .. 16565786 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTTGAATGGTTAGAATCTGATATGGAAAGGATAAACCATGGTGGGCCTCAACTGTTAAAAAGCTTTGTGAGCTGTTTGCCTTTGGTAATTGAGTTTTTTGTTTTGTTATCTATCAGAATACTCCTTTTTCTTATCTCTCATGGACTTTCTGGGTTGTTCCCTCTTTGTTTGTTACCTTCAAATGTCACTTTCAAATTTCGCAATTCAAAGCCTTAATTACCACTTTGTTTATATCATGAATGCATTAATTTCCATTGCCTCACGGAAAACTGACAATTTATTTTATTATTATTATTATTATTATTATTATATTTTATCTTTTGATATTATGACATTCAGATATTTCTCATGGTACAACTGAACTCTGTTGCCTTTTCGTTCTTCCAATAGGTCAGCTGGTTCACAAGAGTCGAGTTCTTGTGCTGTGGAGCAAATCAACACTGAGAATCCTCTTCTACTTTACAGGTTTTTGTTACTTTTTTCCTTTCTCTAGGCTGCTCTCTGGTTTCAGCTTATTTCGCGCTTTCTCTTTGTGTTTTCGTCTCCCTGAATTTGACGAATTCTTCAGGATCTGAGCGTTAAAAGCTTCCCCGAACCGTGTATCTATTATCGGTTGCATCTGCTTGAGATACAACGAAATCCCGAGTTTTGGAAGCTCAATCTTAGATTTAGAACGAAAAAAATAGTGTGTAGATTAGAAATCTAGATTGTAGAACATAAGGGTTAAGTTGGTTCTTTTGTTCTTGTTCTTCTGGTGGCTGATTCTGCTTGGGTTACTTAAACGAAGCCAGATGACTGTTGATGAAGCTGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGATAAGGCATTTGAGAATGCACTTGCTAGTCATCCCGAGGATGATTCGGATCGTTGGGAGAAAATTGCAGCCGATGTACCGGGAAAAACTGTAGAAGAGATTAAACATCATTATGAGCTCTTAGTTGAGGATGTGAATCTAATCGAATCGGGGTGTGTGCCTCTTCCTTCTTATAGTTCTTCTTCAGATGGTTCGGCTAGCCATGCTGGTGATGAAGGAACGACTAAGAAAAATGGCCATTTTGGGCACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCGAGGTCGGATCAGGAACGTCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGGTGAATCGATTGTTTTATGTTTACTCTTCTCTCCTCGTCCTTCGTATAAATAAGCTGTGATATGATCTCTTAATAAAGTCAAAAGTACAGATACTGTTACATTAAACGAATCGTTTTTGTTTCTTTCTACTTGAGACATTAATATCTTCTTGTTTTCACGACTGAAAAATTCTATTACCGTAGCCTAATCGAGTTAGACCGGTCCCATCCTAAGTTCCTATTTAGGATACCTTGGTTGTTCTTCATTATCACTTTCCTTAAATGAGTCATATATATGGCAATGGATATGTCTATTTTTCGATTTTCGTTCGATCTGCTGAGTTGTTAGAATAGAATTAATTTCTTCATACCCTTCTGAAATCACATCACATATCTTGGTTGAAATCATCCTGCTTTTGTTGAAATTGTATGATAACATTTTCGATCTTATTGTGATAAGTCTGCTTCTTAGTTCTTATGTATCCCGACCGCATCTAAATCCTAAGTGTTGTAAATTCTGATCTTTCTAGCTAAGGTTGCTGTAATCAAACCCGAAATCAGCAAGTTAGACACCATCTAGTGCATACGAAAACTTGCACCAAGAGGGAGTTTTTGAGGTCGAGTAGGTAATCTATGAGATATGAACAGGAACGGAATTCTCGACCAAAAGGTCAGAGGTTCAAATTCCTGCACTTGCTAACCAAGAAAATCCTACTTTGTAAAGAGTTCCCATTACAAAATGTTTCCTTCATTATGTAGTTTCGGTTTAGGTTTGGTTTCGTATCTCTGATCTTTGGAATTCTGTTCTTTGGAGAGCTCTTCGAGGGAGATGCATGTTTTGTGATTCTTAATACCGAAAGAAATTCATTTGATATAGTTTCATTTGGTTGACTGATACATCGTGTTATTGGAAGCTCGTTGGAAAAATGTCTTCTGTTGTCGTGTCATAGTGATTTGATACTAGTCGATGCGTTCAATGTTGTGTCCAACATCGTTGACTGGCCGTGTGTTGGCTGTTCAAAATTGCATGTTTATCTTTTGTTTTTCATTATGTCGTTTTTAATCTCCTCCATGCTTGACAACACAGATTGTTTCTACTTGGTCTCGATAAATATGGGAAAGGAGACTGGCGGAGCATATCTCGAAACTTCGTAGTCACAAGAACACCGACGCAAGTGGCGAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGATCCAGTATCCACGATATCACTAGTGTCACAAACGGAGATGTCTCAGCCGCCCAAGGACCGATCACCGGTCAAGCAAATGGCTCTGTAGCAGCTCCTTCTGGAAAACCAACAAAACAGCCTCCTCAACCTGCAGCTGGTCCTCCTGGTGTGGGAATGTATGGTGGTCCAACCATTGGACAGCCAGTGGGCGGACCAGTCGTCTCAGCTGTTGGCACCCCTGTCAATATCCCTGCTCCAGCTCACATGGCGTATGGGGTTCGAGCCCCAGTGCCCGGCACGGTGGTTCCCGGTGCACCTGTAAACATGGGTCCGATGACATATCCGATGCCACACACATCTGCTCATAGGTAAAATAATATACAAATGATTAGATGCTGGGAATGCCATTTTTTTTGTTTTAAAACCTTTCTTTGGATCATCTTCTCTCATTGGCAATGGAAAAATAAAAGCCACAGTGGAGGAAATTTATAAGTTTCTGTATAGGCATTAGGCAGCTTATGGAACAAAAAGTGGTTAGCAGTTATGAATGAATAGGACATCTTCTGTCTCTCTGTCTCTGTGTTTTGTGGGTGAAAATTGTCATAGGTAGAACTATTTTTGTTGCTAAACTTTGAAGCCATGTTCATAAAGTTTAAGATTTAATCATTTCATTACAAAGCAGAATCAATGTTTGGATCTTGTGTTCTTCTTGTCTTCTCCAGTGTTCATTGCTGTTTCCATACTGTTTCTGAGAAAATAAGGAAGAGCTGGGAGCTGAGACATCATTTTTACTTTCATTTGGTGTTGATTTTTTTTTTTTTTTTT

mRNA sequence

ATGGGCGTTGAATGGTCAGCTGGTTCACAAGAGTCGAGTTCTTGTGCTGTGGAGCAAATCAACACTGAGAATCCTCTTCTACTTTACAGGGTTAAGTTGGTTCTTTTGTTCTTGTTCTTCTGGTGGCTGATTCTGCTTGGGTTACTTAAACGAAGCCAGATGACTGTTGATGAAGCTGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGATAAGGCATTTGAGAATGCACTTGCTAGTCATCCCGAGGATGATTCGGATCGTTGGGAGAAAATTGCAGCCGATGTACCGGGAAAAACTGTAGAAGAGATTAAACATCATTATGAGCTCTTAGTTGAGGATGTGAATCTAATCGAATCGGGGTGTGTGCCTCTTCCTTCTTATAGTTCTTCTTCAGATGGTTCGGCTAGCCATGCTGGTGATGAAGGAACGACTAAGAAAAATGGCCATTTTGGGCACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCGAGGTCGGATCAGGAACGTCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGATTGTTTCTACTTGGTCTCGATAAATATGGGAAAGGAGACTGGCGGAGCATATCTCGAAACTTCGTAGTCACAAGAACACCGACGCAAGTGGCGAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGATCCAGTATCCACGATATCACTAGTGTCACAAACGGAGATGTCTCAGCCGCCCAAGGACCGATCACCGGTCAAGCAAATGGCTCTGTAGCAGCTCCTTCTGGAAAACCAACAAAACAGCCTCCTCAACCTGCAGCTGGTCCTCCTGGTGTGGGAATGTATGGTGGTCCAACCATTGGACAGCCAGTGGGCGGACCAGTCGTCTCAGCTGTTGGCACCCCTGTCAATATCCCTGCTCCAGCTCACATGGCGTATGGGGTTCGAGCCCCAGTGCCCGGCACGGTGGTTCCCGGTGCACCTGTAAACATGGGTCCGATGACATATCCGATGCCACACACATCTGCTCATAGGTAAAATAATATACAAATGATTAGATGCTGGGAATGCCATTTTTTTTGTTTTAAAACCTTTCTTTGGATCATCTTCTCTCATTGGCAATGGAAAAATAAAAGCCACAGTGGAGGAAATTTATAAGTTTCTGTATAGGCATTAGGCAGCTTATGGAACAAAAAGTGGTTAGCAGTTATGAATGAATAGGACATCTTCTGTCTCTCTGTCTCTGTGTTTTGTGGGTGAAAATTGTCATAGGTAGAACTATTTTTGTTGCTAAACTTTGAAGCCATGTTCATAAAGTTTAAGATTTAATCATTTCATTACAAAGCAGAATCAATGTTTGGATCTTGTGTTCTTCTTGTCTTCTCCAGTGTTCATTGCTGTTTCCATACTGTTTCTGAGAAAATAAGGAAGAGCTGGGAGCTGAGACATCATTTTTACTTTCATTTGGTGTTGATTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGGCGTTGAATGGTCAGCTGGTTCACAAGAGTCGAGTTCTTGTGCTGTGGAGCAAATCAACACTGAGAATCCTCTTCTACTTTACAGGGTTAAGTTGGTTCTTTTGTTCTTGTTCTTCTGGTGGCTGATTCTGCTTGGGTTACTTAAACGAAGCCAGATGACTGTTGATGAAGCTGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGATAAGGCATTTGAGAATGCACTTGCTAGTCATCCCGAGGATGATTCGGATCGTTGGGAGAAAATTGCAGCCGATGTACCGGGAAAAACTGTAGAAGAGATTAAACATCATTATGAGCTCTTAGTTGAGGATGTGAATCTAATCGAATCGGGGTGTGTGCCTCTTCCTTCTTATAGTTCTTCTTCAGATGGTTCGGCTAGCCATGCTGGTGATGAAGGAACGACTAAGAAAAATGGCCATTTTGGGCACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCGAGGTCGGATCAGGAACGTCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGATTGTTTCTACTTGGTCTCGATAAATATGGGAAAGGAGACTGGCGGAGCATATCTCGAAACTTCGTAGTCACAAGAACACCGACGCAAGTGGCGAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGATCCAGTATCCACGATATCACTAGTGTCACAAACGGAGATGTCTCAGCCGCCCAAGGACCGATCACCGGTCAAGCAAATGGCTCTGTAGCAGCTCCTTCTGGAAAACCAACAAAACAGCCTCCTCAACCTGCAGCTGGTCCTCCTGGTGTGGGAATGTATGGTGGTCCAACCATTGGACAGCCAGTGGGCGGACCAGTCGTCTCAGCTGTTGGCACCCCTGTCAATATCCCTGCTCCAGCTCACATGGCGTATGGGGTTCGAGCCCCAGTGCCCGGCACGGTGGTTCCCGGTGCACCTGTAAACATGGGTCCGATGACATATCCGATGCCACACACATCTGCTCATAGGTAA

Protein sequence

MGVEWSAGSQESSSCAVEQINTENPLLLYRVKLVLLFLFFWWLILLGLLKRSQMTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVEDVNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQPVGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR

Homology

[Close]

BLAST of Cp4.1LG01g19420 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.6e-47
Identity = 100/194 (51.55%), Postives = 135/194 (69.59%), Query Frame = 1


Query: 52  SQMTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLV 111
           S   ++E+ S++ W+  ++KAFENALA   E+  +RWE++A  VPGKTV ++   Y+ L 
Sbjct: 13  SSWFLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELE 72

Query: 112 EDVNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERR 171
           +DV+ IE+G VP+P YS+SS  +       G       +G     S+ G     S+QER+
Sbjct: 73  DDVSSIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRP---SEQERK 132

Query: 172 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 231
           KG+ WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  K++R
Sbjct: 133 KGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKR 192

Query: 232 RSSIHDITSVTNGD 246
           R+SIHDIT+V   D
Sbjct: 193 RASIHDITTVNLSD 203

[Close]

BLAST of Cp4.1LG01g19420 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 70/161 (43.48%), Postives = 98/161 (60.87%), Query Frame = 1


Query: 124 LPSYSSSSDGSASHAGDEGTTKKNGHF-GHCNGDSNHGSKTSRSDQERRKGIAWTEDEHR 183
           L  Y   +  + ++ GD   + K     G+ + D +     S S +ER++G+ WTE+EH+
Sbjct: 45  LSQYEHPNANNNNNGGDNNESSKVAQDEGYASAD-DAVQHQSNSGRERKRGVPWTEEEHK 104

Query: 184 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDITSVT 243
           LFLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R +++N+ RRRSS+ DIT+ +
Sbjct: 105 LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDS 164

Query: 244 NGDVSAAQGPITGQANGSVAAPSGKPTKQ----PPQPAAGP 280
              +   +  +  +    V AP+  PT +    P  P  GP
Sbjct: 165 VSVMPIEE--VENKQEIPVVAPATLPTTKTNAFPVAPTVGP 202

[Close]

BLAST of Cp4.1LG01g19420 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-14
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 61  SSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVEDVNLIESG 120
           SS  W+ +Q+KAFE ALA++ +D  +RW+ +A  V GKT EE+K HYELLV+D+N IE+G
Sbjct: 10  SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENG 69

Query: 121 CVPLPSYSSSSDGSASHAGDEGTTKKN 148
            VP P+Y +S   +      E    +N
Sbjct: 70  HVPFPNYRTSGGCTNGRLSQEEKRMRN 96

[Close]

BLAST of Cp4.1LG01g19420 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-14
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1


Query: 60  GSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVEDVNLIES 119
           GS   WS +++KAFE ALA + +D  DRW  +A  V G+T EE+K HYE+LVED+  IES
Sbjct: 6   GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIES 65

Query: 120 GCVPLPSYSSS 131
           G VP P+Y ++
Sbjct: 66  GKVPFPNYRTT 76

[Close]

BLAST of Cp4.1LG01g19420 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.3e-14
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           M  +   S S W+  Q+K FE ALA + +D  DRW  +A  V GKTVEE+K HY++LVED
Sbjct: 1   MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSAS 137
           +  IE+G VPLP+Y +    S S
Sbjct: 61  LINIETGRVPLPNYKTFESNSRS 83

[Close]

BLAST of Cp4.1LG01g19420 vs. TrEMBL
Match: A0A0A0KTA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G353650 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 3.0e-157
Identity = 282/295 (95.59%), Postives = 290/295 (98.31%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           VNLIESGCVPLPSYSSSSDGSA+HAGDEGTTKKNGHFG+CNGDSNHGSKTSRSDQERRKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQP 293
           SIHDITSV NGD+SAAQGPITGQANGS AAPSGKPTKQPPQ AAGPPGVGMYGGPT+GQP
Sbjct: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 294 VGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           VGGP+VSAVGTPV++PAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMP TSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Cp4.1LG01g19420 vs. TrEMBL
Match: B9H5N1_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s08990g PE=4 SV=2)

HSP 1 Score: 488.0 bits (1255), Expect = 9.3e-135
Identity = 245/295 (83.05%), Postives = 265/295 (89.83%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           M+V+E GS SLW+ EQDKAFENALA++PED SD WEKI ADVPGKTVEEIKHHYELLVED
Sbjct: 1   MSVNEGGSGSLWTKEQDKAFENALATYPEDTSDWWEKITADVPGKTVEEIKHHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           ++ IE+GCVPLP+YSSSS+GS SHA DEGT KK GH GH N DSN+G+K SRSDQERRKG
Sbjct: 61  ISQIEAGCVPLPNYSSSSEGSTSHAIDEGTGKKGGHLGHHNSDSNNGNKASRSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQP 293
           SIHDITSV NGDV+A QGPITGQ NGS A  SGK  KQPP    GPPGVG+YG PTIGQP
Sbjct: 181 SIHDITSVGNGDVAAPQGPITGQTNGSAAGSSGKAAKQPPAQPVGPPGVGIYGPPTIGQP 240

Query: 294 VGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           +GGP+VSAVGTPVN+PAPAHMAYGVRAPVPGTVVPGAP+NM PMTYPMPHT+ HR
Sbjct: 241 IGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMVPMTYPMPHTTTHR 295

[Close]

BLAST of Cp4.1LG01g19420 vs. TrEMBL
Match: A0A067G2J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.6e-134
Identity = 249/298 (83.56%), Postives = 271/298 (90.94%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIAADVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTT--KKNGHFGHCNGDSNHGSKTSRSDQERR 173
           VN IESGCVPLPSY+SSSDGS SHAGDEGT+  KK GH+GH N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 174 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 233
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 234 RSSIHDITSVTNGDVSAAQGPITGQANGS-VAAPSGKPTKQPPQPAAGPPGVGMYGGPTI 293
           RSSIHDITSV NGD+SA QGPITGQ NGS     SGK +KQPPQ +AGPPGVGMYG PT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 294 GQPVGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           GQP+GGP+VSAVGTPVN+PAPAHMAYGVRAPVPGTVVPGAP+N+ PM YPMPH SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Cp4.1LG01g19420 vs. TrEMBL
Match: B9HGD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2)

HSP 1 Score: 485.0 bits (1247), Expect = 7.9e-134
Identity = 244/296 (82.43%), Postives = 264/296 (89.19%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           M+VDE GS SLW+ E DKAFENALA++PED SDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           +N IE+GCVPLP YSSSS+GS SHAGDEGT KK GH GH N +SNHG+K SRSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGS-VAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQ 293
           SIHDITSV NGD++  QGPITGQ NGS VA  SGK  KQPP   AGPPGVG+YG PTIGQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 294 PVGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           P+GGP+VSAVGTPVN+ APAHMAYGVRAPVPG +VPGAP+NMGPMTYPMP T+ HR
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTYPMPPTTTHR 296

[Close]

BLAST of Cp4.1LG01g19420 vs. TrEMBL
Match: V4VEK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-133
Identity = 248/298 (83.22%), Postives = 270/298 (90.60%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIAADVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTT--KKNGHFGHCNGDSNHGSKTSRSDQERR 173
           VN IESGCVPLPSY+SSSDGS SHAGDEGT+  KK GH+GH N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 174 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 233
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 234 RSSIHDITSVTNGDVSAAQGPITGQANGS-VAAPSGKPTKQPPQPAAGPPGVGMYGGPTI 293
           RSSIHDITSV NGD+SA QGPITGQ NGS     SGK +KQPPQ +AGPPGVGMYG PT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 294 GQPVGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           GQP+GGP+VSAVGTPVN+PAPAHMAYGVRA VPGTVVPGAP+N+ PM YPMPH SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Cp4.1LG01g19420 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 359.8 bits (922), Expect = 1.9e-99
Identity = 207/310 (66.77%), Postives = 228/310 (73.55%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTV+E    S+WS E D AFE ALA++ ++  +RWEKIAADVPGK+VE+IK HYELLVED
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           V  IESGCVPLP+Y S  +GS  HAGDEG + K G   H  G+SN   K S+SDQERRKG
Sbjct: 61  VTRIESGCVPLPAYGSP-EGSNGHAGDEGASSKKGGNSHA-GESNQAGK-SKSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANG-------------SVAAPSGKPTKQPPQPAAGPP 293
           SIHDITSV N DVS  QGPITGQ N              +VA    K  KQ    A  PP
Sbjct: 181 SIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQA--PP 240

Query: 294 GVGMYGGPTIGQPVGGPVVSAVGTPVNIPAPAHMAYGVR-APVPGTVVPGAPVNMGPMTY 349
           G  MYG P IGQP       AVGTPVN+PAP HMAYGV  APVPG+VVPGA +N+G M Y
Sbjct: 241 GPPMYGTPAIGQP-------AVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPY 298

[Close]

BLAST of Cp4.1LG01g19420 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 231.9 bits (590), Expect = 6.1e-61
Identity = 149/308 (48.38%), Postives = 194/308 (62.99%), Query Frame = 1


Query: 65  WSLEQDKAFENALASH---PEDDSDRWEKIAADVPGKTVEEIKHHYELLVEDVNLIESGC 124
           WS E++KAFENA+A H    E   D+W K+++ VP K +EE+K HY++L+EDV  IE+G 
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 125 VPLPSY------------SSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKT--SRSD 184
           VPLP Y            ++++  +   +   G+++K  + G     S++G ++  SR++
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127

Query: 185 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN 244
           QERRKGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSMN
Sbjct: 128 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 187

Query: 245 KERRRSSIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQP-PQPAAGPP----GV 304
           ++RRRSSIHDIT+V N   +   G   GQ    V     +P  QP PQP    P    G+
Sbjct: 188 RDRRRSSIHDITTVNNQAPAVTGG---GQQPQVVKHRPAQPQPQPQPQPQQHHPPTMAGL 247

Query: 305 GMYGGPTIGQPVGGP---VVSAVGTPVNIPAPA---HMAYGVRAPVPGTVVPGAPVNMGP 345
           GMYGG  +GQP+  P   + SAVGTPV +P P    H  +     V    VP  PV   P
Sbjct: 248 GMYGGAPVGQPIIAPPDHMGSAVGTPVMLPPPMGTHHHHHHHHLGVAPYAVPAYPVPPLP 307

[Close]

BLAST of Cp4.1LG01g19420 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 186.4 bits (472), Expect = 2.9e-47
Identity = 100/196 (51.02%), Postives = 135/196 (68.88%), Query Frame = 1


Query: 48  LLKRSQMTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHY 107
           L++ ++  V  +G  + W+  ++KAFENALA + ++  DRW+K+AA +PGKTV ++   Y
Sbjct: 17  LMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQY 76

Query: 108 ELLVEDVNLIESGCVPLPSYSSSSDGSASHAGDEGTTK--KNGHFGHCNGDSNHGSKTSR 167
             L  DV+ IE+G +P+P Y +S   +   AG  G     K GH   CN  S  G     
Sbjct: 77  NDLEADVSSIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGH-QVCNKRSQAGRSP-- 136

Query: 168 SDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS 227
            + ER+KG+ WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S
Sbjct: 137 -ELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLS 196

Query: 228 MNKERRRSSIHDITSV 242
             K++RR+SIHDIT+V
Sbjct: 197 GGKDKRRASIHDITTV 208

[Close]

BLAST of Cp4.1LG01g19420 vs. TAIR10
Match: AT2G38090.1 (AT2G38090.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 8.6e-47
Identity = 101/206 (49.03%), Postives = 132/206 (64.08%), Query Frame = 1


Query: 65  WSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVEDVNLIESGCVPL 124
           W+ E++K FENALA + +D  DRW ++AA +PGKTV ++   Y  L EDV+ IE+G +P+
Sbjct: 29  WTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLIPI 88

Query: 125 PSYSSSS-----DGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKGIAWTED 184
           P Y+S S      G    +G+ G      +F    G    GS    ++ ER+KG+ WTE+
Sbjct: 89  PGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGG--KRGSAARTAEHERKKGVPWTEE 148

Query: 185 EHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDIT 244
           EHR FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR  +  K++RRSSIHDIT
Sbjct: 149 EHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSIHDIT 208

Query: 245 SVTNGDVSAAQGPITGQANGSVAAPS 266
           +V   D   A       AN   + PS
Sbjct: 209 TVNIPDSPDAAAADNATANAPCSPPS 232

[Close]

BLAST of Cp4.1LG01g19420 vs. TAIR10
Match: AT5G23650.1 (AT5G23650.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 171.8 bits (434), Expect = 7.5e-43
Identity = 109/231 (47.19%), Postives = 138/231 (59.74%), Query Frame = 1


Query: 58  EAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVEDVNLI 117
           E    S WS + D AFE ALA + +    RW+KIA  VPGKT+E++  HY +L  DV LI
Sbjct: 6   EISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLI 65

Query: 118 ESGCVPLPSYSSSSDGSASHA-GDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKGIAW 177
           ESGCV LP Y    +    +A G E +  + G+      +S H  K S+  Q+RR+G+ W
Sbjct: 66  ESGCVRLPDYDDFLEEPNHNAFGKERSILEGGN--DRKYESKHKGK-SKLKQKRRRGVPW 125

Query: 178 TEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIH 237
              EHR FL GL KYGKGDWRSISR+ VVTRT TQVASHAQKYF  +NS +K+R+R SIH
Sbjct: 126 KPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSIH 185

Query: 238 DITSVTNGDVSAAQGPITGQA--NGSVAAPSGKPTKQPPQPAAGPPGVGMY 286
           DIT   N  +S  Q PIT Q   N    A + +  +   QP+   P  G +
Sbjct: 186 DITIAENKSISTKQRPITWQKINNNGATASNTQANQTTLQPSLDIPIYGTH 233

[Close]

BLAST of Cp4.1LG01g19420 vs. NCBI nr
Match: gi|449464296|ref|XP_004149865.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus])

HSP 1 Score: 562.8 bits (1449), Expect = 4.3e-157
Identity = 282/295 (95.59%), Postives = 290/295 (98.31%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           VNLIESGCVPLPSYSSSSDGSA+HAGDEGTTKKNGHFG+CNGDSNHGSKTSRSDQERRKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQP 293
           SIHDITSV NGD+SAAQGPITGQANGS AAPSGKPTKQPPQ AAGPPGVGMYGGPT+GQP
Sbjct: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 294 VGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           VGGP+VSAVGTPV++PAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMP TSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Cp4.1LG01g19420 vs. NCBI nr
Match: gi|659072320|ref|XP_008465139.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis melo])

HSP 1 Score: 559.7 bits (1441), Expect = 3.6e-156
Identity = 281/295 (95.25%), Postives = 288/295 (97.63%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIA DVPGKTVEEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTVEEIKHHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           VNLIESGCVPLPSYSSSSDGSA+HAGDEGTTKKNGHFG+CNGDSNHGSKTSRSDQE RKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQEHRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQP 293
           SIHDITSV NGD+SA QGPITGQANGS AAPSGKPTKQPPQ AAGPPGVGMYGGPT+GQP
Sbjct: 181 SIHDITSVANGDISATQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 294 VGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           VGGP+VSAVGTPV++PAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMP TSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Cp4.1LG01g19420 vs. NCBI nr
Match: gi|1009138875|ref|XP_015886818.1| (PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba])

HSP 1 Score: 488.8 bits (1257), Expect = 7.9e-135
Identity = 245/295 (83.05%), Postives = 264/295 (89.49%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDE GSSSLW+ EQDKAFENALA+HPED SD WEKIAADVPGKT+EE+KHHYELL ED
Sbjct: 1   MTVDEEGSSSLWTREQDKAFENALATHPEDASDWWEKIAADVPGKTLEEVKHHYELLAED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           V  IESGCVPLP Y+SSS+GS SHAGDEGT KK GH G+ + +SNHGSKTSRSDQERRKG
Sbjct: 61  VKQIESGCVPLPCYNSSSEGSTSHAGDEGTGKKGGHTGNYSSESNHGSKTSRSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQP 293
           SIHDITSV N D+S AQGPITGQANGS    + K TKQPPQP AGPPGVGMYG PTIGQP
Sbjct: 181 SIHDITSVGNTDISGAQGPITGQANGSAGGSASKSTKQPPQPPAGPPGVGMYGAPTIGQP 240

Query: 294 VGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           VGGP+VSAVGTPVN+P+  H+AYGVRAPV G +VPGAP+NMGPM YPMPHT+ HR
Sbjct: 241 VGGPLVSAVGTPVNLPSAPHIAYGVRAPVAGAMVPGAPMNMGPMPYPMPHTTTHR 295

[Close]

BLAST of Cp4.1LG01g19420 vs. NCBI nr
Match: gi|566170293|ref|XP_002306366.2| (myb family transcription factor family protein [Populus trichocarpa])

HSP 1 Score: 488.0 bits (1255), Expect = 1.3e-134
Identity = 245/295 (83.05%), Postives = 265/295 (89.83%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           M+V+E GS SLW+ EQDKAFENALA++PED SD WEKI ADVPGKTVEEIKHHYELLVED
Sbjct: 1   MSVNEGGSGSLWTKEQDKAFENALATYPEDTSDWWEKITADVPGKTVEEIKHHYELLVED 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTTKKNGHFGHCNGDSNHGSKTSRSDQERRKG 173
           ++ IE+GCVPLP+YSSSS+GS SHA DEGT KK GH GH N DSN+G+K SRSDQERRKG
Sbjct: 61  ISQIEAGCVPLPNYSSSSEGSTSHAIDEGTGKKGGHLGHHNSDSNNGNKASRSDQERRKG 120

Query: 174 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 233
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 234 SIHDITSVTNGDVSAAQGPITGQANGSVAAPSGKPTKQPPQPAAGPPGVGMYGGPTIGQP 293
           SIHDITSV NGDV+A QGPITGQ NGS A  SGK  KQPP    GPPGVG+YG PTIGQP
Sbjct: 181 SIHDITSVGNGDVAAPQGPITGQTNGSAAGSSGKAAKQPPAQPVGPPGVGIYGPPTIGQP 240

Query: 294 VGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           +GGP+VSAVGTPVN+PAPAHMAYGVRAPVPGTVVPGAP+NM PMTYPMPHT+ HR
Sbjct: 241 IGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMVPMTYPMPHTTTHR 295

[Close]

BLAST of Cp4.1LG01g19420 vs. NCBI nr
Match: gi|641851056|gb|KDO69927.1| (hypothetical protein CISIN_1g022439mg [Citrus sinensis])

HSP 1 Score: 487.3 bits (1253), Expect = 2.3e-134
Identity = 249/298 (83.56%), Postives = 271/298 (90.94%), Query Frame = 1


Query: 54  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAADVPGKTVEEIKHHYELLVED 113
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIAADVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 114 VNLIESGCVPLPSYSSSSDGSASHAGDEGTT--KKNGHFGHCNGDSNHGSKTSRSDQERR 173
           VN IESGCVPLPSY+SSSDGS SHAGDEGT+  KK GH+GH N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 174 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 233
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 234 RSSIHDITSVTNGDVSAAQGPITGQANGS-VAAPSGKPTKQPPQPAAGPPGVGMYGGPTI 293
           RSSIHDITSV NGD+SA QGPITGQ NGS     SGK +KQPPQ +AGPPGVGMYG PT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 294 GQPVGGPVVSAVGTPVNIPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPHTSAHR 349
           GQP+GGP+VSAVGTPVN+PAPAHMAYGVRAPVPGTVVPGAP+N+ PM YPMPH SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR 297

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g19420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DIV_ANTMA	3.6e-47	51.55	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MY1R1_SOLTU	1.6e-23	43.48	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
RADL1_ARATH	1.8e-14	45.98	Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1	[more]
RAD_ANTMA	4.0e-14	52.11	Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1	[more]
RADL6_ARATH	5.3e-14	48.19	Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g19420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTA8_CUCSA	3.0e-157	95.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G353650 PE=4 SV=1	[more]
B9H5N1_POPTR	9.3e-135	83.05	Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0...	[more]
A0A067G2J5_CITSI	1.6e-134	83.56	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1	[more]
B9HGD2_POPTR	7.9e-134	82.43	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2	[more]
V4VEK0_9ROSI	1.3e-133	83.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g19420 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08520.1	1.9e-99	66.77	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	6.1e-61	48.38	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	2.9e-47	51.02	Homeodomain-like transcriptional regulator	[more]
AT2G38090.1	8.6e-47	49.03	Duplicated homeodomain-like superfamily protein	[more]
AT5G23650.1	7.5e-43	47.19	Homeodomain-like transcriptional regulator	[more]

BLAST of Cp4.1LG01g19420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464296\|ref\|XP_004149865.1\|	4.3e-157	95.59	PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus]	[more]
gi\|659072320\|ref\|XP_008465139.1\|	3.6e-156	95.25	PREDICTED: transcription factor DIVARICATA-like [Cucumis melo]	[more]
gi\|1009138875\|ref\|XP_015886818.1\|	7.9e-135	83.05	PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba]	[more]
gi\|566170293\|ref\|XP_002306366.2\|	1.3e-134	83.05	myb family transcription factor family protein [Populus trichocarpa]	[more]
gi\|641851056\|gb\|KDO69927.1\|	2.3e-134	83.56	hypothetical protein CISIN_1g022439mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017930	Myb_dom
IPR017884	SANT_dom
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g19420.1	Cp4.1LG01g19420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 175..219 score: 3.4E-11coord: 65..108 score: 5.
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 61..113 score: 1.4E-9coord: 172..222 score: 3.2
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 172..222 score: 3.3
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 175..218 score: 1.8E-10coord: 65..108 score: 8.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 63..119 score: 2.58E-10coord: 170..225 score: 1.64
IPR017884	SANT domain	PROFILE	PS51293	SANT	coord: 60..115 score: 8
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 167..224 score: 17
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 57..261 score: 3.9E-187coord: 281..348 score: 3.9E
None	No IPR available	PANTHER	PTHR24078:SF279	DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN	coord: 57..261 score: 3.9E-187coord: 281..348 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g19420	Cucsa.013870	Cucumber (Gy14) v1	cgycpeB0578
Cp4.1LG01g19420	CmaCh04G022380	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g19420	CmoCh04G023390	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g19420	Cla009078	Watermelon (97103) v1	cpewmB441
Cp4.1LG01g19420	Csa5G353650	Cucumber (Chinese Long) v2	cpecuB454
Cp4.1LG01g19420	MELO3C005072	Melon (DHL92) v3.5.1	cpemeB359
Cp4.1LG01g19420	ClCG01G008050	Watermelon (Charleston Gray)	cpewcgB370
Cp4.1LG01g19420	CSPI05G13890	Wild cucumber (PI 183967)	cpecpiB443
Cp4.1LG01g19420	Lsi09G008540	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g19420	MELO3C011759.2	Melon (DHL92) v3.6.1	cpemedB435
Cp4.1LG01g19420	MELO3C005072.2	Melon (DHL92) v3.6.1	cpemedB419
Cp4.1LG01g19420	CsaV3_5G020780	Cucumber (Chinese Long) v3	cpecucB0549
Cp4.1LG01g19420	Bhi07G000904	Wax gourd	cpewgoB0567
Cp4.1LG01g19420	CsGy5G013750	Cucumber (Gy14) v2	cgybcpeB653
Cp4.1LG01g19420	Carg17772	Silver-seed gourd	carcpeB0670

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g19420	Cp4.1LG01g09980	Cucurbita pepo (Zucchini)	cpecpeB380

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g19420	Wax gourd	cpewgoB0490
Cp4.1LG01g19420	Wax gourd	cpewgoB0491
Cp4.1LG01g19420	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g19420	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g19420	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g19420	Silver-seed gourd	carcpeB1158