Csa5G353650.2 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G353650.2
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative MYB transcription factor; contains IPR009057 (Homeodomain-like)
Location	Chr5 : 13607122 .. 13611494 (-)
Sequence length	888

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCGTTAGTTTTTTCTGGGTTCGATCATCGATTTTTCTAGGCTTTGAAAGCAAGAAGACGAGGGTTTCGAGGTGGGTTTCTTCTTCTTTTCATTCAAATCAGTGGTTTATCGAGCTGTTTTTGATGTTTAAGAAGTGGGTTTTATGGAATTTTTATGAACCTGTTTATTTTTTGAATTCAGATTCTCATAAACGAAAACCCCTTTTGAACTTTGCTTCATTAAAACTGAAATCCTTTCACTTTGATTGAATCCAATTTGGGGTTTTATGGTCTTTTGTTTTTGGAAACCGACAATACCTAACACATCCTTTTACTTCTTTCGTATATCTATATATTCAAGATAGGTTCTATTTTTGGACTTCTTTTCTCTTCTTTCCTTAAATGATTCCACCCCATCTGCTTAAGTAGCAGAAACAATCTTATGCTAAGTTATGATTTGCTGTAAAAAATGAGTGTAGAATTGTGAGAATCTGAAATGGAACGGGATAAACTTTGGTGGGCCTCAAGTGTTAAAAAAGCTTTGTGACATGTTTGGCTTTGGTAATTGAGTTTTTTGTTTTGTTATGTATCAGAAGACTCCTCTTTTACTCTTTTTTTCCCCTCTTATTATCCTTCGTGAACTTCTGGGTTGTTACCTCTATGTTTGTTAGTCTCCAATGTCCCTTTCAAATTTCGCAATTCAAAGCTTTAATTACCACTTTGTTTATATCATGACTGCATTAATTTCCATTGCCTCACAGAAAACTGACAATATATTTTATTATTAATATTATTATTGTTATATTTACTATTACTATTATTATTATTTTTTGATATTATGGCATTCAGATATTTCTTATGGTCCAACTGAACTCTGTTGCCTTTTCGTTCTTTCAATAGGTCAGCTGCTCACAAGAGTCGAGTTCTTGTGCTGTGGAGCAAATCAACACTGAGAATCCTCTTCTACTTTACAGGTTTTTGCTACTTTTTCTCTAGACTGCTCTCTGGTTTCAACTTGCTCCAAGCTTTCTCTTTGTGTTTTCGTCTTCGTCTTCCCGAATTTGAAGTAAATTGCGGGATCTGAAGCCTTATCTGCTTCCCCAATCTGAATCTTTGTTATCGGTTGCATCTACGTGAGATAGAACAAAGTCCCAATTCCATAAATCAGTTCTGGAAACTCAGTCTTCTCTTAGATTTAGGAAACAGAAAATTTAATTGTTAGAAACCTCAATTTTGGAACACTAGCGTACAGTTGGGTGAAGCTGGTTCTTTTCTTCTTCTTCTGGTGGCTAATTCTGCTCAGCAGACTTAAACAAGGTCAGATGACTGTTGATGAAGCAGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGACAAGGCATTTGAGAATGCACTTGCAAGTCATCCCGAGGATGATTCGGATCGGTGGGAGAAAATTGCAGTCGATGTACCAGGGAAAACCATAGAAGAGATTAAACATCACTATGAGCTCTTAGTTGAGGATGTTAATCTAATTGAATCGGGTTGTGTGCCTCTCCCTTCCTATAGTTCTTCTTCAGATGGTTCAGCCAACCATGCTGGTGATGAAGGAACAACTAAGAAGAATGGTCATTTTGGGAACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCAAGGTCAGATCAAGAACGCCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGGTGAATTGACTCTTTATGTTTATGCTTCTCTCCCTCGTCCTTCTCATAGAAGCTGTGATATGGTATCTTATGAAAGTCAAAAGTTTGGTTACTGTTTTGTTAATCAGATTACTTTTGTTTCTTTCTCCTTGACACAAACATCTTGTTTTCATGGAACTAGCTACAGTCCATGAATGACACACTATATTATCATAGGCATAGCATAGTCGAGTTAGACTGGTCCTGTCCTAAACCCCTACCTGAGCTCACGGGAATGTGCTATTTCTAATGCTCTGTTAGGTATATGTCTCTGATTTCTAATGAAACACTAATTGCCTCGGTAAACCTCCTCCTGCCTAAAGTTTTCTTTATCCAATTAAAGTTACACGATACAACCATGCCTCAGGTCTCTCAAACTCAATTACTTAGAATTGATTTTTGTCCTACTTCAGACAAACAAAGGTTTAGTAGCATATTGATGACAAATAGCAGCCGTAACCCGAAGTTTTAAATGTCATGTATGTCTGTTTAGTTGTGATGCTGTCCAAAATTGCTCTCTTGTTTTTAGGTTTTGGAGTTTATTCTAATAAATTTGTACTCCCGAAATCTAGTTGGAAACATTCTTTGGGAGGGGGATCAGCTGAGTTATTGGAATAAAGTTAGTTTCTTTATGCCCTTCTTTTGAAACCACCTCCATATCTCTGTTGAAACCATCCTGCTTTTTATTGAAAATGTATGATGAGATTTTCAGTTTTATTGTGGCTAAGTCTGCTTCTTGGTTCTTCTGTGTTCCGCCAACGTGGTGTAAATTCTGATCTTTCTAGCTATAGTCGATGCAACTGAACCTAAACACATTGATGCATATGAACACTTGCATCAAGATAGTGTTTCATCAAATCCAGTAGGCCTTTTATGAGTTGTGAGAATAAAAGAATCCTGGATTTTAATGTAACGTAAAGAGTTTTCATTACAACCTGTTTCCTATATGAGTTAAATCATCCATTGACCAAAAAGTTTAAGATAGTGGGTTGTCATAAATTTAATTATGTCAAAATTTAACACTTTCCTTCACTCGTCGGCTTGCTTGAAAGTTTGTAACTGACCCAACAAATGGAGATTAATATTAAGCAAGGAGGAAATGACATAGGTTCAAACATAGAATCTCTTATTCTAATGCCATGTTAAATCACCGATTGACTCGAATTTAAGCTAGTGGGCTAAGATAAATTTAATTATTTCAACACTTCAATGTTATTCCAAATTTGTTGCATTTACTTTCAGCTCTTAGAAGATTTGTTTGTTGAGAACTCTTCATATTGCCTTCCTTTGATTGACTCAAACATCTTTATTGGAAGCTCTTTGGAAATATGTCCTGTCGAGTAATCTGATATTTGGATTTTGGATTAAATGTTAAGAACTTATTAACCACGTTATTATTTAGTGGTTCTATACGTTATTATAGTATGTGTTTGGGATACAAACTATTTTAATTTGGATAGGAAAATAAACGCTAACAAAAAAGATTTGGAAATAGTAAAATTGTAGTGTATCATAGGCTATAATAGTTGGTTTCCAACTAATAATAGTAATGTTAGCCCCAAACTAGTCCCCAATCCACTTGAAGCTGGGGGTCCAAACATCCCCTTGGGGACTTATTAGACACATTTAAAATTTTAAATGCATATGACGATTTGATGCATTCAATGTTGTGCCCAACTGACGCGTCACCGTGTGTTGAGTGCTCAAATTGTTCTTAGAAACTGGTTTAAGAACTAGTGAAACATGTTTGGTAAATCTGTTTATTCTTTTTGCCTTGTTTTAGAAAATCTGACTTATGAATAACGTTATGGTTTGTAAATGCCAAGCTTATAGCCTAAAATTTTTCTGAGGCCTTATAACGCTGGCCTTTAGAAGTTGAAGTATTTCTTTGTTCCATGTGTTTCTCTTTCTTTGTAACATCTGCCTTGAAGTTTTAAACTCCTTCATGCCTGACTACACAGATTATTTCTACTTGGTCTTGATAAATATGGGAAAGGAGACTGGCGGAGTATATCCCGAAACTTTGTTGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGGTCCAGCATCCACGATATCACCAGCGTTGCAAATGGAGATATCTCAGCGGCTCAAGGGCCAATCACGGGTCAAGCAAATGGCTCTGGAGCAGCTCCCTCTGGAAAACCAACAAAACAGCCTCCTCAATCTGCAGCTGGTCCTCCTGGTGTGGGAATGTACGGTGGTCCAACAATGGGACAGCCAGTGGGCGGTCCACTTGTCTCAGCTGTTGGCACCCCTGTCAGTCTCCCTGCTCCCGCTCATATGGCATATGGAGTCCGAGCTCCAGTGCCCGGCACAGTGGTTCCCGGTGCACCCGTAAACATGGGCCCAATGACATATCCAATGCCTCCCACATCTGCTCATAGGTAATATACAAATTATTGGATGCTGGGAATGCCATTTTGTTTTTTCTCAATCTTTCAATTATCTTCTCTAATTGGCAATGGAAATAAAGCCATAATGGAGGAAAATTTACAAGTTTCTGTATAGGCAGTAGGAAGTTAAGGAACAAAAAAAATGGTAAGCAGTTATGAATGAATAGGACATCCTCTGTTAGATCTCTCTCTCTTT

mRNA sequence

ATGACTGTTGATGAAGCAGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGACAAGGCATTTGAGAATGCACTTGCAAGTCATCCCGAGGATGATTCGGATCGGTGGGAGAAAATTGCAGTCGATGTACCAGGGAAAACCATAGAAGAGATTAAACATCACTATGAGCTCTTAGTTGAGGATGTTAATCTAATTGAATCGGGTTGTGTGCCTCTCCCTTCCTATAGTTCTTCTTCAGATGGTTCAGCCAACCATGCTGGTGATGAAGGAACAACTAAGAAGAATGGTCATTTTGGGAACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCAAGGTCAGATCAAGAACGCCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGATTATTTCTACTTGGTCTTGATAAATATGGGAAAGGAGACTGGCGGAGTATATCCCGAAACTTTGTTGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGGTCCAGCATCCACGATATCACCAGCGTTGCAAATGGAGATATCTCAGCGGCTCAAGGGCCAATCACGGGTCAAGCAAATGGCTCTGGAGCAGCTCCCTCTGGAAAACCAACAAAACAGCCTCCTCAATCTGCAGCTGGTCCTCCTGGTGTGGGAATGTACGGTGGTCCAACAATGGGACAGCCAGTGGGCGGTCCACTTGTCTCAGCTGTTGGCACCCCTGTCAGTCTCCCTGCTCCCGCTCATATGGCATATGGAGTCCGAGCTCCAGTGCCCGGCACAGTGGTTCCCGGTGCACCCGTAAACATGGGCCCAATGACATATCCAATGCCTCCCACATCTGCTCATAGGTAA

Coding sequence (CDS)

ATGACTGTTGATGAAGCAGGAAGTAGCTCCTTGTGGAGTTTAGAACAGGACAAGGCATTTGAGAATGCACTTGCAAGTCATCCCGAGGATGATTCGGATCGGTGGGAGAAAATTGCAGTCGATGTACCAGGGAAAACCATAGAAGAGATTAAACATCACTATGAGCTCTTAGTTGAGGATGTTAATCTAATTGAATCGGGTTGTGTGCCTCTCCCTTCCTATAGTTCTTCTTCAGATGGTTCAGCCAACCATGCTGGTGATGAAGGAACAACTAAGAAGAATGGTCATTTTGGGAACTGTAATGGTGATTCAAATCATGGAAGTAAGACTTCAAGGTCAGATCAAGAACGCCGTAAAGGGATTGCTTGGACAGAGGATGAACACAGATTATTTCTACTTGGTCTTGATAAATATGGGAAAGGAGACTGGCGGAGTATATCCCGAAACTTTGTTGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAATACTTCATCCGTTTGAACTCAATGAACAAAGAAAGGAGGCGGTCCAGCATCCACGATATCACCAGCGTTGCAAATGGAGATATCTCAGCGGCTCAAGGGCCAATCACGGGTCAAGCAAATGGCTCTGGAGCAGCTCCCTCTGGAAAACCAACAAAACAGCCTCCTCAATCTGCAGCTGGTCCTCCTGGTGTGGGAATGTACGGTGGTCCAACAATGGGACAGCCAGTGGGCGGTCCACTTGTCTCAGCTGTTGGCACCCCTGTCAGTCTCCCTGCTCCCGCTCATATGGCATATGGAGTCCGAGCTCCAGTGCCCGGCACAGTGGTTCCCGGTGCACCCGTAAACATGGGCCCAATGACATATCCAATGCCTCCCACATCTGCTCATAGGTAA

Protein sequence

MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR*

Homology

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BLAST of Csa5G353650.2 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 104/222 (46.85%), Postives = 141/222 (63.51%), Query Frame = 1


Query: 3   VDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVN 62
           ++E+ S++ W+  ++KAFENALA   E+  +RWE++A  VPGKT+ ++   Y+ L +DV+
Sbjct: 17  LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76

Query: 63  LIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIA 122
            IE+G VP+P YS+SS  +       G       +G     S+ G     S+QER+KG+ 
Sbjct: 77  SIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRP---SEQERKKGVP 136

Query: 123 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSI 182
           WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  K++RR+SI
Sbjct: 137 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASI 196

Query: 183 HDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAA 225
           HDIT+V   D            N + +  + KP   P  S A
Sbjct: 197 HDITTVNLSD------------NQTPSPDNKKPPSSPDHSMA 223

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BLAST of Csa5G353650.2 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 1


Query: 71  LPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIAWTEDEHRL 130
           L  Y   +  + N+ GD   + K           +     S S +ER++G+ WTE+EH+L
Sbjct: 45  LSQYEHPNANNNNNGGDNNESSKVAQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKL 104

Query: 131 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDITS 188
           FLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R +++N+ RRRSS+ DIT+
Sbjct: 105 FLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITT 161

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BLAST of Csa5G353650.2 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.3e-16
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 1


Query: 8  SSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESG 67
          SS  W+ +Q+KAFE ALA++ +D  +RW+ +A  V GKT EE+K HYELLV+D+N IE+G
Sbjct: 10 SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENG 69

Query: 68 CVPLPSYSSSSDGSANHAGDEGTTKKN 95
           VP P+Y +S   +      E    +N
Sbjct: 70 HVPFPNYRTSGGCTNGRLSQEEKRMRN 96

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BLAST of Csa5G353650.2 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-14
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1


Query: 7  GSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIES 66
          GS   WS +++KAFE ALA + +D  DRW  +A  V G+T EE+K HYE+LVED+  IES
Sbjct: 6  GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIES 65

Query: 67 GCVPLPSYSSS 78
          G VP P+Y ++
Sbjct: 66 GKVPFPNYRTT 76

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BLAST of Csa5G353650.2 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.6e-14
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 1  MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
          M  +   S S W+  Q+K FE ALA + +D  DRW  +A  V GKT+EE+K HY++LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNLIESGCVPLPSYSSSSDGS 82
          +  IE+G VPLP+Y +    S
Sbjct: 61 LINIETGRVPLPNYKTFESNS 81

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BLAST of Csa5G353650.2 vs. TrEMBL
Match: A0A0A0KTA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G353650 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 1.4e-171
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP
Sbjct: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Csa5G353650.2 vs. TrEMBL
Match: B9HGD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2)

HSP 1 Score: 509.6 bits (1311), Expect = 2.5e-141
Identity = 243/296 (82.09%), Postives = 264/296 (89.19%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           M+VDE GS SLW+ E DKAFENALA++PED SDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           +N IE+GCVPLP YSSSS+GS +HAGDEGT KK GH G+ N +SNHG+K SRSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSG-AAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQ 240
           SIHDITSV NGDI+  QGPITGQ NGS  A  SGK  KQPP   AGPPGVG+YG PT+GQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 241 PVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           P+GGPLVSAVGTPV+L APAHMAYGVRAPVPG +VPGAP+NMGPMTYPMPPT+ HR
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTYPMPPTTTHR 296

[Close]

BLAST of Csa5G353650.2 vs. TrEMBL
Match: A0A067G2J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 3.3e-141
Identity = 249/298 (83.56%), Postives = 270/298 (90.60%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIA DVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTT--KKNGHFGNCNGDSNHGSKTSRSDQERR 120
           VN IESGCVPLPSY+SSSDGS +HAGDEGT+  KK GH+G+ N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 180
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVANGDISAAQGPITGQANGS-GAAPSGKPTKQPPQSAAGPPGVGMYGGPTM 240
           RSSIHDITSV NGDISA QGPITGQ NGS G   SGK +KQPPQ +AGPPGVGMYG PTM
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           GQP+GGPLVSAVGTPV+LPAPAHMAYGVRAPVPGTVVPGAP+N+ PM YPMP  SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Csa5G353650.2 vs. TrEMBL
Match: V4VEK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 2.8e-140
Identity = 248/298 (83.22%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIA DVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTT--KKNGHFGNCNGDSNHGSKTSRSDQERR 120
           VN IESGCVPLPSY+SSSDGS +HAGDEGT+  KK GH+G+ N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 180
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVANGDISAAQGPITGQANGS-GAAPSGKPTKQPPQSAAGPPGVGMYGGPTM 240
           RSSIHDITSV NGDISA QGPITGQ NGS G   SGK +KQPPQ +AGPPGVGMYG PTM
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           GQP+GGPLVSAVGTPV+LPAPAHMAYGVRA VPGTVVPGAP+N+ PM YPMP  SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Csa5G353650.2 vs. TrEMBL
Match: B9H5N1_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s08990g PE=4 SV=2)

HSP 1 Score: 504.2 bits (1297), Expect = 1.1e-139
Identity = 239/295 (81.02%), Postives = 263/295 (89.15%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           M+V+E GS SLW+ EQDKAFENALA++PED SD WEKI  DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVNEGGSGSLWTKEQDKAFENALATYPEDTSDWWEKITADVPGKTVEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           ++ IE+GCVPLP+YSSSS+GS +HA DEGT KK GH G+ N DSN+G+K SRSDQERRKG
Sbjct: 61  ISQIEAGCVPLPNYSSSSEGSTSHAIDEGTGKKGGHLGHHNSDSNNGNKASRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSV NGD++A QGPITGQ NGS A  SGK  KQPP    GPPGVG+YG PT+GQP
Sbjct: 181 SIHDITSVGNGDVAAPQGPITGQTNGSAAGSSGKAAKQPPAQPVGPPGVGIYGPPTIGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           +GGPLVSAVGTPV+LPAPAHMAYGVRAPVPGTVVPGAP+NM PMTYPMP T+ HR
Sbjct: 241 IGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMVPMTYPMPHTTTHR 295

[Close]

BLAST of Csa5G353650.2 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 377.5 bits (968), Expect = 7.6e-105
Identity = 203/309 (65.70%), Postives = 228/309 (73.79%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTV+E    S+WS E D AFE ALA++ ++  +RWEKIA DVPGK++E+IK HYELLVED
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCN-GDSNHGSKTSRSDQERRK 120
           V  IESGCVPLP+Y S  +GS  HAGDEG + K G  GN + G+SN   K S+SDQERRK
Sbjct: 61  VTRIESGCVPLPAYGSP-EGSNGHAGDEGASSKKG--GNSHAGESNQAGK-SKSDQERRK 120

Query: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRR 180
           GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRR
Sbjct: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITSVANGDISAAQGPITGQ----------ANGSGAAPSGKPTKQPPQSAA-GPPG 240
           SSIHDITSV N D+S  QGPITGQ           N S  A +G   K   Q+ +  PPG
Sbjct: 181 SSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPG 240

Query: 241 VGMYGGPTMGQPVGGPLVSAVGTPVSLPAPAHMAYGVR-APVPGTVVPGAPVNMGPMTYP 296
             MYG P +GQP       AVGTPV+LPAP HMAYGV  APVPG+VVPGA +N+G M Y 
Sbjct: 241 PPMYGTPAIGQP-------AVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYT 298

[Close]

BLAST of Csa5G353650.2 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-68
Identity = 151/307 (49.19%), Postives = 191/307 (62.21%), Query Frame = 1


Query: 12  WSLEQDKAFENALASH---PEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESGC 71
           WS E++KAFENA+A H    E   D+W K++  VP K +EE+K HY++L+EDV  IE+G 
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 72  VPLPSY-----------SSSSDGSANH-AGDEGTTKKNGHFGNCNGDSNHGSKT--SRSD 131
           VPLP Y           ++++   AN  +   G+++K  + G     S++G ++  SR++
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127

Query: 132 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN 191
           QERRKGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSMN
Sbjct: 128 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 187

Query: 192 KERRRSSIHDITSVANGDISAAQGPITGQ-ANGSGAAPSGKPTKQPPQSAAGPP---GVG 251
           ++RRRSSIHDIT+V N   +   G    Q      A P  +P  QP Q    PP   G+G
Sbjct: 188 RDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQH--HPPTMAGLG 247

Query: 252 MYGGPTMGQPVGGP---LVSAVGTPVSLPAPA---HMAYGVRAPVPGTVVPGAPVNMGPM 292
           MYGG  +GQP+  P   + SAVGTPV LP P    H  +     V    VP  PV   P 
Sbjct: 248 MYGGAPVGQPIIAPPDHMGSAVGTPVMLPPPMGTHHHHHHHHLGVAPYAVPAYPVPPLPQ 307

[Close]

BLAST of Csa5G353650.2 vs. TAIR10
Match: AT2G38090.1 (AT2G38090.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-49
Identity = 101/207 (48.79%), Postives = 132/207 (63.77%), Query Frame = 1


Query: 12  WSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLIESGCVPL 71
           W+ E++K FENALA + +D  DRW ++A  +PGKT+ ++   Y  L EDV+ IE+G +P+
Sbjct: 29  WTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLIPI 88

Query: 72  PSYSSSSDGSANHAGDEGTTKKNGHFGNCNG------DSNHGSKTSRSDQERRKGIAWTE 131
           P Y+S S  + +  G +G +  NG   N NG          GS    ++ ER+KG+ WTE
Sbjct: 89  PGYASDSF-TLDWGGYDGASGNNGF--NMNGYYFSAAGGKRGSAARTAEHERKKGVPWTE 148

Query: 132 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIHDI 191
           +EHR FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR  +  K++RRSSIHDI
Sbjct: 149 EEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSIHDI 208

Query: 192 TSVANGDISAAQGPITGQANGSGAAPS 213
           T+V   D   A       AN   + PS
Sbjct: 209 TTVNIPDSPDAAAADNATANAPCSPPS 232

[Close]

BLAST of Csa5G353650.2 vs. TAIR10
Match: AT5G23650.1 (AT5G23650.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-49
Identity = 109/216 (50.46%), Postives = 133/216 (61.57%), Query Frame = 1


Query: 5   EAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVNLI 64
           E    S WS + D AFE ALA + +    RW+KIA  VPGKT+E++  HY +L  DV LI
Sbjct: 6   EISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLI 65

Query: 65  ESGCVPLPSYSSSSDGSANHA-GDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKGIAW 124
           ESGCV LP Y    +   ++A G E +  + G+  +   +S H  K S+  Q+RR+G+ W
Sbjct: 66  ESGCVRLPDYDDFLEEPNHNAFGKERSILEGGN--DRKYESKHKGK-SKLKQKRRRGVPW 125

Query: 125 TEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRSSIH 184
              EHR FL GL KYGKGDWRSISR+ VVTRT TQVASHAQKYF  +NS +K+R+R SIH
Sbjct: 126 KPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSIH 185

Query: 185 DITSVANGDISAAQGPITGQ-ANGSGAAPSGKPTKQ 219
           DIT   N  IS  Q PIT Q  N +GA  S     Q
Sbjct: 186 DITIAENKSISTKQRPITWQKINNNGATASNTQANQ 218

[Close]

BLAST of Csa5G353650.2 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-49
Identity = 97/188 (51.60%), Postives = 128/188 (68.09%), Query Frame = 1


Query: 3   VDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVEDVN 62
           V  +G  + W+  ++KAFENALA + ++  DRW+K+A  +PGKT+ ++   Y  L  DV+
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 63  LIESGCVPLPSYSSSSDGSANHAGDEGTTK--KNGHFGNCNGDSNHGSKTSRSDQERRKG 122
            IE+G +P+P Y +S   + + AG  G     K GH   CN  S  G      + ER+KG
Sbjct: 85  SIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGH-QVCNKRSQAGRSP---ELERKKG 144

Query: 123 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 182
           + WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  K++RR+
Sbjct: 145 VPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRA 204

Query: 183 SIHDITSV 189
           SIHDIT+V
Sbjct: 205 SIHDITTV 208

[Close]

BLAST of Csa5G353650.2 vs. NCBI nr
Match: gi|449464296|ref|XP_004149865.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus])

HSP 1 Score: 610.1 bits (1572), Expect = 2.0e-171
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP
Sbjct: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Csa5G353650.2 vs. NCBI nr
Match: gi|659072320|ref|XP_008465139.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis melo])

HSP 1 Score: 606.3 bits (1562), Expect = 2.9e-170
Identity = 292/295 (98.98%), Postives = 293/295 (99.32%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKT+EEIKHHYELLVED
Sbjct: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTVEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQE RKG
Sbjct: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQEHRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSVANGDISA QGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP
Sbjct: 181 SIHDITSVANGDISATQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR
Sbjct: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 295

[Close]

BLAST of Csa5G353650.2 vs. NCBI nr
Match: gi|566180022|ref|XP_006380485.1| (hypothetical protein POPTR_0007s07150g [Populus trichocarpa])

HSP 1 Score: 509.6 bits (1311), Expect = 3.7e-141
Identity = 243/296 (82.09%), Postives = 264/296 (89.19%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           M+VDE GS SLW+ E DKAFENALA++PED SDRWEKIA DVPGKT+EEIKHHYELLVED
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           +N IE+GCVPLP YSSSS+GS +HAGDEGT KK GH G+ N +SNHG+K SRSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSG-AAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQ 240
           SIHDITSV NGDI+  QGPITGQ NGS  A  SGK  KQPP   AGPPGVG+YG PT+GQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 241 PVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           P+GGPLVSAVGTPV+L APAHMAYGVRAPVPG +VPGAP+NMGPMTYPMPPT+ HR
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTYPMPPTTTHR 296

[Close]

BLAST of Csa5G353650.2 vs. NCBI nr
Match: gi|641851056|gb|KDO69927.1| (hypothetical protein CISIN_1g022439mg [Citrus sinensis])

HSP 1 Score: 509.2 bits (1310), Expect = 4.8e-141
Identity = 249/298 (83.56%), Postives = 270/298 (90.60%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSS+W+ EQDKAFENAL S+PED SDRWEKIA DVPGK++EEIK HYELLV+D
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTT--KKNGHFGNCNGDSNHGSKTSRSDQERR 120
           VN IESGCVPLPSY+SSSDGS +HAGDEGT+  KK GH+G+ N +SN G+K+SRSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERR 180
           KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVANGDISAAQGPITGQANGS-GAAPSGKPTKQPPQSAAGPPGVGMYGGPTM 240
           RSSIHDITSV NGDISA QGPITGQ NGS G   SGK +KQPPQ +AGPPGVGMYG PTM
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           GQP+GGPLVSAVGTPV+LPAPAHMAYGVRAPVPGTVVPGAP+N+ PM YPMP  SAHR
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPYPMPHASAHR 297

[Close]

BLAST of Csa5G353650.2 vs. NCBI nr
Match: gi|1009138875|ref|XP_015886818.1| (PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba])

HSP 1 Score: 507.7 bits (1306), Expect = 1.4e-140
Identity = 243/295 (82.37%), Postives = 261/295 (88.47%), Query Frame = 1


Query: 1   MTVDEAGSSSLWSLEQDKAFENALASHPEDDSDRWEKIAVDVPGKTIEEIKHHYELLVED 60
           MTVDE GSSSLW+ EQDKAFENALA+HPED SD WEKIA DVPGKT+EE+KHHYELL ED
Sbjct: 1   MTVDEEGSSSLWTREQDKAFENALATHPEDASDWWEKIAADVPGKTLEEVKHHYELLAED 60

Query: 61  VNLIESGCVPLPSYSSSSDGSANHAGDEGTTKKNGHFGNCNGDSNHGSKTSRSDQERRKG 120
           V  IESGCVPLP Y+SSS+GS +HAGDEGT KK GH GN + +SNHGSKTSRSDQERRKG
Sbjct: 61  VKQIESGCVPLPCYNSSSEGSTSHAGDEGTGKKGGHTGNYSSESNHGSKTSRSDQERRKG 120

Query: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180
           IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMGQP 240
           SIHDITSV N DIS AQGPITGQANGS    + K TKQPPQ  AGPPGVGMYG PT+GQP
Sbjct: 181 SIHDITSVGNTDISGAQGPITGQANGSAGGSASKSTKQPPQPPAGPPGVGMYGAPTIGQP 240

Query: 241 VGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAHR 296
           VGGPLVSAVGTPV+LP+  H+AYGVRAPV G +VPGAP+NMGPM YPMP T+ HR
Sbjct: 241 VGGPLVSAVGTPVNLPSAPHIAYGVRAPVAGAMVPGAPMNMGPMPYPMPHTTTHR 295

The following BLAST results are available for this feature:

BLAST of Csa5G353650.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DIV_ANTMA	1.1e-49	46.85	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MY1R1_SOLTU	1.6e-27	51.28	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
RADL1_ARATH	6.3e-16	45.98	Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1	[more]
RAD_ANTMA	2.0e-14	52.11	Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1	[more]
RADL6_ARATH	2.6e-14	46.91	Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1	[more]

BLAST of Csa5G353650.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTA8_CUCSA	1.4e-171	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G353650 PE=4 SV=1	[more]
B9HGD2_POPTR	2.5e-141	82.09	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2	[more]
A0A067G2J5_CITSI	3.3e-141	83.56	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1	[more]
V4VEK0_9ROSI	2.8e-140	83.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1	[more]
B9H5N1_POPTR	1.1e-139	81.02	Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0...	[more]

BLAST of Csa5G353650.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08520.1	7.6e-105	65.70	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	1.5e-68	49.19	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	1.6e-49	48.79	Duplicated homeodomain-like superfamily protein	[more]
AT5G23650.1	4.6e-49	50.46	Homeodomain-like transcriptional regulator	[more]
AT5G58900.1	7.8e-49	51.60	Homeodomain-like transcriptional regulator	[more]

BLAST of Csa5G353650.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464296\|ref\|XP_004149865.1\|	2.0e-171	100.00	PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus]	[more]
gi\|659072320\|ref\|XP_008465139.1\|	2.9e-170	98.98	PREDICTED: transcription factor DIVARICATA-like [Cucumis melo]	[more]
gi\|566180022\|ref\|XP_006380485.1\|	3.7e-141	82.09	hypothetical protein POPTR_0007s07150g [Populus trichocarpa]	[more]
gi\|641851056\|gb\|KDO69927.1\|	4.8e-141	83.56	hypothetical protein CISIN_1g022439mg [Citrus sinensis]	[more]
gi\|1009138875\|ref\|XP_015886818.1\|	1.4e-140	82.37	PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa5G353650	Csa5G353650	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa5G353650.2	Csa5G353650.2-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa5G353650.2.utr3p1	Csa5G353650.2.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa5G353650.2.cds3	Csa5G353650.2.cds3	CDS
Csa5G353650.2.cds2	Csa5G353650.2.cds2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa5G353650.2.utr5p2	Csa5G353650.2.utr5p2	five_prime_UTR
Csa5G353650.2.utr5p1	Csa5G353650.2.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..55 score: 2.0E-8coord: 122..166 score: 2.7
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 119..169 score: 3.2E-10coord: 8..60 score: 2.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 119..169 score: 2.6
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 122..165 score: 1.4E-10coord: 11..55 score: 4.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 10..66 score: 8.61E-10coord: 117..172 score: 1.27
IPR017877	Myb-like domain	PROFILE	PS50090	MYB_LIKE	coord: 12..58 score: 6
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 114..171 score: 17
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 4..208 score: 2.5E-185coord: 228..295 score: 2.5E
None	No IPR available	PANTHER	PTHR24078:SF279	DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN	coord: 4..208 score: 2.5E-185coord: 228..295 score: 2.5E