Csa5G188900 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G188900
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein At2g39855/T5I7.3
Location	Chr5 : 8496803 .. 8498505 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACAAGAAGCTGCAAGTTGCTACGTCTTCCTCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGATATTTTGGCTCTATGTTCCCGCCACCGGTTGGTACTTCAATTTCAACTACTTGGATTTGTTTTTTTAGTCTCTCCCTTTCAATGTATCTCTTTCTCTGTTTTTCTCTTTCTTTCTCTTTAGATATGGATTTCCTGAACTGGGTCATTTTCATTCTTTAGCAGTTCCTTGTTGGTTTTGCATGTTTCAAGTTGTTGATGATATGACAACTTAAAATTAGACAGAACTGGAATAAGAAAGCTTCTTGGTTAAGAAATCAAAGTAAAATGCAAGTTTGGTTTCTTTCTAATAAAGATAGAAAGTACTTGTTAAAGGAACCCAAAAGTGGTCCTGTACTGTTCTGTTCTATATGAAAAATTTCATGGGATTTTAAAGTTTACTTTGAACTTTGTCTCTGATTCTAGGTGGTAGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCATTGCTGAAGTTGGGAATCCAGGTTTTTCTAACCTTCTAAAACATGAACTTGATCACATTTCTCTCACAAAGGAAAAGAAGACCATGTCTAATCTAATCCTATCCAATCTCTCATACAATTTTCACTGTTGAATAATTTTACAAATGATATTAACTTCTCCATTTATTTAAAACTAGCTTTTGTTCCTCTCAGATAATGCTACTATAAATGGCAAAAAAGGAACTGGTGGTGCAAGTGGGAAAGATGAAAGCTCCATGTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGCGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAGTCCCATCCTAATGTAAGCATTTCAAAATGCTCACGTGCTATCTTTCTTGTAGTTTACTTTAGTGTTTGGATAAAACTAGAAGCCTTTTGGTTAAAATACCCTTTTTGGTCACTATACTTTGTAACTTGTTCTATTTTAGTCCCTATACTTTCAAATGTCCAATTTTAGGTCTCATACTTTCACAAAATCTAAATATTAGTTCCTACCTTTAATTCATGATTAATATTTCTGACATGAAAAGATTTGATAATGATGCGATATTGCTTTGTAAAGTGTTACTGTTGTCTTCATATACATACTGATATTACTAAATCCTTTATCAGTTTAAGAAAGAAGTGAAAGACAATGATGCAAATGAAAGCAATTCAAACCCTGCTTCAAGAGGAAACTGGTGGAAAGGTATGCCATGGATTTGCTATTTGACAAAGAAGAGTTACTGATGGTTAGACAATTTTTTTAACTCAGCAATCTGTTTTCAGGCTCTCTTTATTACTAACGCTCCACCTATATGATGGGATTTGTCACCTGCATAGGTATACCAAAATATCCTCTCGGTTACTCCTAGGCGTACGTTGTTTATTTTGTGTTTTTTCATGAATGTTTTCTTCCATTTTCGATATATTTCAGATCATTATATTGATTTCAGGCAATCACTGATGTATTTTTCACCATGGATTTGCTCTGTTCCTATCCCATCATCCCAGTTTACTAACATTCAGTTATTTGATTATGTTCTAGGATTTGGTGACAGTATAATCGACATTATATTATCATTTACAAGCTTAGCTACCATATTATAG

mRNA sequence

ATGGAAAACAAGAAGCTGCAAGTTGCTACGTCTTCCTCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGATATTTTGGCTCTATGTTCCCGCCACCGGTGGTAGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCATTGCTGAAGTTGGGAATCCAGATAATGCTACTATAAATGGCAAAAAAGGAACTGGTGGTGCAAGTGGGAAAGATGAAAGCTCCATGTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGCGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAGTCCCATCCTAATTTTAAGAAAGAAGTGAAAGACAATGATGCAAATGAAAGCAATTCAAACCCTGCTTCAAGAGGAAACTGGTGGAAAGATCATTATATTGATTTCAGGCAATCACTGATGTATTTTTCACCATGGATTTGCTCTGTTCCTATCCCATCATCCCAGTTTACTAACATTCAGTTATTTGATTATGTTCTAGGATTTGGTGACAGTATAATCGACATTATATTATCATTTACAAGCTTAGCTACCATATTATAG

Coding sequence (CDS)

ATGGAAAACAAGAAGCTGCAAGTTGCTACGTCTTCCTCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGATATTTTGGCTCTATGTTCCCGCCACCGGTGGTAGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCATTGCTGAAGTTGGGAATCCAGATAATGCTACTATAAATGGCAAAAAAGGAACTGGTGGTGCAAGTGGGAAAGATGAAAGCTCCATGTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGCGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAGTCCCATCCTAATTTTAAGAAAGAAGTGAAAGACAATGATGCAAATGAAAGCAATTCAAACCCTGCTTCAAGAGGAAACTGGTGGAAAGATCATTATATTGATTTCAGGCAATCACTGATGTATTTTTCACCATGGATTTGCTCTGTTCCTATCCCATCATCCCAGTTTACTAACATTCAGTTATTTGATTATGTTCTAGGATTTGGTGACAGTATAATCGACATTATATTATCATTTACAAGCTTAGCTACCATATTATAG

Protein sequence

MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSIAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQSHPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQLFDYVLGFGDSIIDIILSFTSLATIL*

Homology

[Close]

BLAST of Csa5G188900 vs. TrEMBL
Match: A0A0A0KNZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G188900 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-114
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180
           HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180

Query: 181 FDYVLGFGDSIIDIILSFTSLATIL 206
           FDYVLGFGDSIIDIILSFTSLATIL
Sbjct: 181 FDYVLGFGDSIIDIILSFTSLATIL 205

[Close]

BLAST of Csa5G188900 vs. TrEMBL
Match: W9S7I3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010379 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-34
Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1


Query: 3   NKKLQVATSSSSSLDHIFGPMDS-NSASSTSTTGYFGSMFPPP--VVERERKKDVGNQVS 62
           N    V     SSLD++FGP DS NSASS+STTG FGS+FPPP  V  RE K+ +GNQ+ 
Sbjct: 8   NNNKNVVGHGYSSLDYLFGPKDSSNSASSSSTTGLFGSIFPPPSTVHGRENKRHLGNQLG 67

Query: 63  IAEVGNPDNATINGKKG-TGGASGKDESSMYQNETM-EPSYFSSSIFYGGQENYSPRTNA 122
            ++   P+N     +KG + G + KD  S+YQNET+ EP YFSSSI+YGGQENYSPRT  
Sbjct: 68  SSKYEKPENMYSQSRKGESSGVTSKD--SIYQNETVAEPCYFSSSIYYGGQENYSPRTRT 127

Query: 123 SQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           ++S  +FKK+  ++D N +NSN ASRGNWW+
Sbjct: 128 TESQHSFKKDGSEDDPNGNNSNSASRGNWWQ 156

[Close]

BLAST of Csa5G188900 vs. TrEMBL
Match: B9SE36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1483210 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.2e-34
Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVE--RERKKDVGNQV 60
           MENK+     + +SSLDH+FGP DS+S+SS+S++  FGS+F PP +   R+    +GNQ 
Sbjct: 1   MENKR----QTGASSLDHLFGPKDSSSSSSSSSS-VFGSIFSPPSMGMGRDSAGIMGNQA 60

Query: 61  SIAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNAS 120
             ++ G PDN T + K    G  GKD SS YQNET EP YFSSSI+YGGQENYSPRT  S
Sbjct: 61  GNSKYGIPDNVTQSNKGSNSGIMGKDSSSFYQNETAEPCYFSSSIYYGGQENYSPRTRNS 120

Query: 121 QSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           +SH   KK+ K +D N ++SN ASRGNWW+
Sbjct: 121 ESHV-LKKDDKKDDPNGNSSNSASRGNWWQ 144

[Close]

BLAST of Csa5G188900 vs. TrEMBL
Match: B9HHI7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06200g PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.9e-33
Identity = 82/150 (54.67%), Postives = 99/150 (66.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPP--VVERERKKDVGNQV 60
           MEN + QV    +SS DH+FGP DS+S+SS S+ G FGS+FPPP  V         GN V
Sbjct: 1   MENNR-QVG---ASSFDHLFGPKDSSSSSSASS-GIFGSIFPPPSKVPAGRDSGTTGNHV 60

Query: 61  SIAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNAS 120
                 NPDNAT   K  + G SGK +SS+YQNET EP YFSSSI+YGGQENYSPRT  S
Sbjct: 61  GNETYVNPDNATRKAKGESSGISGKGQSSVYQNETPEPCYFSSSIYYGGQENYSPRTKNS 120

Query: 121 QSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           +S   FKK+   +D N ++ N ASRGNWW+
Sbjct: 121 ESQHVFKKDYGKDDPNGNDPNSASRGNWWQ 145

[Close]

BLAST of Csa5G188900 vs. TrEMBL
Match: K7KAP3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G252500 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.8e-32
Identity = 79/151 (52.32%), Postives = 102/151 (67.55%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSL--DHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQV 60
           M N K Q   SSSS++  DH+FGP DS+S +S+ST G FGS+FPPP         VG + 
Sbjct: 1   MANNKKQAGGSSSSTMKFDHLFGPKDSSSTTSSST-GLFGSIFPPP-------PSVGGRE 60

Query: 61  S-IAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNA 120
           S + EVG P   T N  + +   S K+ S+ YQNET+EPSYFSSSI+YGGQENYSPR+  
Sbjct: 61  SRMQEVGAPGTQT-NKSESSSRISNKNTSTNYQNETVEPSYFSSSIYYGGQENYSPRSRT 120

Query: 121 SQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           +Q H  FKK+  D D+N ++SN A+RGNWW+
Sbjct: 121 TQPHHVFKKDKDDGDSNSNDSNSAARGNWWQ 142

[Close]

BLAST of Csa5G188900 vs. TAIR10
Match: AT3G55646.1 (AT3G55646.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 7.4e-22
Identity = 65/148 (43.92%), Postives = 83/148 (56.08%), Query Frame = 1


Query: 4   KKLQVATSSSSSL---DHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 63
           KK+  A+SSSSSL   DHIFGP  S+S+SS S TG F S+FPPP  ++     +G QV  
Sbjct: 8   KKIVSASSSSSSLSSFDHIFGPRVSSSSSS-SATGLFKSIFPPPSADQ-----LGRQVDF 67

Query: 64  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 123
           A  G          KG   ++ K++ S Y  ET  P + SSS++YGGQE YS  T  + +
Sbjct: 68  ASQGGHVKYQSPNAKGER-SNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTT--TTT 127

Query: 124 HPNFKKEVKDNDANESNSNPASRGNWWK 149
           H  +KK     D  E +S  ASRGNWW+
Sbjct: 128 HDTYKK-----DGEEGDSKRASRGNWWE 141

[Close]

BLAST of Csa5G188900 vs. TAIR10
Match: AT5G05965.1 (AT5G05965.1 unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 6.5e-18
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1


Query: 1   MENKKLQVATSS-SSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVS 60
           M+ KK + A+SS SSS D++FGP  S SASS ST     S+FPPPV    RKK  G+  +
Sbjct: 1   MDIKKTKAASSSHSSSFDNLFGPKGSASASSCSTI--LDSIFPPPVA---RKK--GSHTA 60

Query: 61  IAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYS-PRTNAS 120
               GN   AT             DE S +  E  E SY+SSSI+YGGQ++YS PRT+ S
Sbjct: 61  PEVQGNISQAT-------------DERSSH--EKRESSYYSSSIYYGGQQHYSPPRTDGS 120

Query: 121 QSHPNFKKEVKDNDANESNSNPASRGNWWK 149
            + P+ + + + ND  +  ++  SRGNWWK
Sbjct: 121 STSPSHQPK-ETNDRTDITTS-TSRGNWWK 126

[Close]

BLAST of Csa5G188900 vs. TAIR10
Match: AT2G39855.1 (AT2G39855.1 unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 1


Query: 9   ATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSIAEVGNPDN 68
           ++SSSSSLDHIFGP  S+S SS STTG F S+FPPP    +      N  +  +  N + 
Sbjct: 11  SSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGAAKYQPTNFET 70

Query: 69  ATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRT 116
               G++    +  K+  S    ET  P   SSSI+YGGQ+NYS  T
Sbjct: 71  PNERGER----SKNKERKSYQSEETQPPCNLSSSIYYGGQDNYSSST 112

[Close]

BLAST of Csa5G188900 vs. TAIR10
Match: AT5G02020.1 (AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12
Identity = 52/155 (33.55%), Postives = 77/155 (49.68%), Query Frame = 1


Query: 1   MENKKLQVATSS---SSSL-DHIFGPMDSNSASSTSTTGYFGSMFPPP--VVERERKKDV 60
           ME +K + ++SS   SSSL   +FG  ++   SS S++G  GS+FPPP  V+ RE    V
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSREN--PSSPSSSGILGSIFPPPSKVLGRE---SV 60

Query: 61  GNQVSIAEVGNPDNATINGKKGTGGASGKDESSMY-QNETMEPSYFSSSIFYGGQENYSP 120
             +       N   +   G         ++  S Y Q++ ++P + SSSI+YGG + Y  
Sbjct: 61  RQETVTGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ 120

Query: 121 RTNASQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
             N++ +  N K      D  E +S  ASRGNWW+
Sbjct: 121 PQNSTSNSTNKK------DGGEDDSGSASRGNWWQ 144

[Close]

BLAST of Csa5G188900 vs. TAIR10
Match: AT5G59080.1 (AT5G59080.1 unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 6.9e-12
Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 1


Query: 9   ATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSIAEVGNPDN 68
           +++SSS    +FG  D +  SS+S  G F +MFP P                    +  +
Sbjct: 11  SSTSSSFTAELFGSKDPSPPSSSS--GIFSTMFPHP--------------------SKGS 70

Query: 69  ATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQSHP---NFK 128
           A        G  + + ES   Q + +EP + SSS++YGGQ+ Y+ R+  +Q++P   N +
Sbjct: 71  ARDGSNSKHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYA-RSTTNQTYPPVKNDR 130

Query: 129 KEVKDNDANESNSNPASRGNWWK 149
           +   ++DAN  N    SRGNWW+
Sbjct: 131 RRSGEDDANGQNPQDVSRGNWWQ 130

[Close]

BLAST of Csa5G188900 vs. NCBI nr
Match: gi|700195417|gb|KGN50594.1| (hypothetical protein Csa_5G188900 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.0e-114
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180
           HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180

Query: 181 FDYVLGFGDSIIDIILSFTSLATIL 206
           FDYVLGFGDSIIDIILSFTSLATIL
Sbjct: 181 FDYVLGFGDSIIDIILSFTSLATIL 205

[Close]

BLAST of Csa5G188900 vs. NCBI nr
Match: gi|778701139|ref|XP_011654971.1| (PREDICTED: uncharacterized protein LOC105435461 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 7.3e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 149
           HPNFKKEVKDNDANESNSNPASRGNWWK
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 148

[Close]

BLAST of Csa5G188900 vs. NCBI nr
Match: gi|659129881|ref|XP_008464894.1| (PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 4.4e-77
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           ME+KKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVS 
Sbjct: 1   MESKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVST 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTG ASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGDASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 149
           HPNFKKE KDNDANESNSNPASRGNWWK
Sbjct: 121 HPNFKKEGKDNDANESNSNPASRGNWWK 148

[Close]

BLAST of Csa5G188900 vs. NCBI nr
Match: gi|802548367|ref|XP_012091167.1| (PREDICTED: uncharacterized protein LOC105649193 [Jatropha curcas])

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-36
Identity = 86/161 (53.42%), Postives = 110/161 (68.32%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKD----VGN 60
           MENKK  V  SS+SSLDH+FGP DS+S+SS+S++  FGS+F PP      ++D    +GN
Sbjct: 1   MENKKHGVG-SSASSLDHLFGPKDSSSSSSSSSSSVFGSIFSPPSSSTGLRRDSAGIMGN 60

Query: 61  QVSIAEVGNP--------DNATINGKKGTGGASGKD-ESSMYQNETMEPSYFSSSIFYGG 120
           Q    + GNP        ++     +   GG SGKD  SS+YQNET EP YFSSSI+YGG
Sbjct: 61  QTGNIKYGNPGMSMHKLYESRYNTAQSNKGGISGKDTSSSVYQNETAEPCYFSSSIYYGG 120

Query: 121 QENYSPRTNASQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           QENYSPRTN  +SH +FKKE K++D N +N+N ASRGNWW+
Sbjct: 121 QENYSPRTNNPESHHSFKKEDKNDDPNGNNANSASRGNWWQ 160

[Close]

BLAST of Csa5G188900 vs. NCBI nr
Match: gi|703144792|ref|XP_010108371.1| (hypothetical protein L484_010379 [Morus notabilis])

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-34
Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1


Query: 3   NKKLQVATSSSSSLDHIFGPMDS-NSASSTSTTGYFGSMFPPP--VVERERKKDVGNQVS 62
           N    V     SSLD++FGP DS NSASS+STTG FGS+FPPP  V  RE K+ +GNQ+ 
Sbjct: 8   NNNKNVVGHGYSSLDYLFGPKDSSNSASSSSTTGLFGSIFPPPSTVHGRENKRHLGNQLG 67

Query: 63  IAEVGNPDNATINGKKG-TGGASGKDESSMYQNETM-EPSYFSSSIFYGGQENYSPRTNA 122
            ++   P+N     +KG + G + KD  S+YQNET+ EP YFSSSI+YGGQENYSPRT  
Sbjct: 68  SSKYEKPENMYSQSRKGESSGVTSKD--SIYQNETVAEPCYFSSSIYYGGQENYSPRTRT 127

Query: 123 SQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           ++S  +FKK+  ++D N +NSN ASRGNWW+
Sbjct: 128 TESQHSFKKDGSEDDPNGNNSNSASRGNWWQ 156

The following BLAST results are available for this feature:

BLAST of Csa5G188900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNZ9_CUCSA	1.4e-114	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G188900 PE=4 SV=1	[more]
W9S7I3_9ROSA	2.5e-34	54.30	Uncharacterized protein OS=Morus notabilis GN=L484_010379 PE=4 SV=1	[more]
B9SE36_RICCO	7.2e-34	54.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1483210 PE=4 SV=1	[more]
B9HHI7_POPTR	7.9e-33	54.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06200g PE=4 SV=1	[more]
K7KAP3_SOYBN	8.8e-32	52.32	Uncharacterized protein OS=Glycine max GN=GLYMA_02G252500 PE=4 SV=1	[more]

BLAST of Csa5G188900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55646.1	7.4e-22	43.92	unknown protein	[more]
AT5G05965.1	6.5e-18	43.33	unknown protein	[more]
AT2G39855.1	3.3e-14	42.99	unknown protein	[more]
AT5G02020.1	2.4e-12	33.55	Encodes a protein involved in salt tolerance, names SIS (Salt Induce...	[more]
AT5G59080.1	6.9e-12	30.77	unknown protein	[more]

BLAST of Csa5G188900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195417\|gb\|KGN50594.1\|	2.0e-114	100.00	hypothetical protein Csa_5G188900 [Cucumis sativus]	[more]
gi\|778701139\|ref\|XP_011654971.1\|	7.3e-80	100.00	PREDICTED: uncharacterized protein LOC105435461 [Cucumis sativus]	[more]
gi\|659129881\|ref\|XP_008464894.1\|	4.4e-77	97.30	PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo]	[more]
gi\|802548367\|ref\|XP_012091167.1\|	3.8e-36	53.42	PREDICTED: uncharacterized protein LOC105649193 [Jatropha curcas]	[more]
gi\|703144792\|ref\|XP_010108371.1\|	3.5e-34	54.30	hypothetical protein L484_010379 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G188900.1	Csa5G188900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33738	FAMILY NOT NAMED	coord: 2..161 score: 1.9
None	No IPR available	PANTHER	PTHR33738:SF2	SUBFAMILY NOT NAMED	coord: 2..161 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G188900	Cla018165	Watermelon (97103) v1	cuwmB423
Csa5G188900	Cla008207	Watermelon (97103) v1	cuwmB386
Csa5G188900	Cla003974	Watermelon (97103) v1	cuwmB391
Csa5G188900	MELO3C026564	Melon (DHL92) v3.5.1	cumeB341
Csa5G188900	MELO3C003186	Melon (DHL92) v3.5.1	cumeB411
Csa5G188900	ClCG04G007570	Watermelon (Charleston Gray)	cuwcgB387
Csa5G188900	ClCG03G001170	Watermelon (Charleston Gray)	cuwcgB384
Csa5G188900	ClCG07G003740	Watermelon (Charleston Gray)	cuwcgB402
Csa5G188900	Lsi04G009260	Bottle gourd (USVL1VR-Ls)	culsiB363
Csa5G188900	MELO3C003186.2	Melon (DHL92) v3.6.1	cumedB398
Csa5G188900	MELO3C026564.2	Melon (DHL92) v3.6.1	cumedB350
Csa5G188900	Cla97C04G074320	Watermelon (97103) v2	cuwmbB376
Csa5G188900	Cla97C07G132070	Watermelon (97103) v2	cuwmbB392
Csa5G188900	Cla97C03G052030	Watermelon (97103) v2	cuwmbB372
Csa5G188900	Bhi07G000592	Wax gourd	cuwgoB511
Csa5G188900	CSPI05G10070	Wild cucumber (PI 183967)	cpicuB240
Csa5G188900	Cucsa.164910	Cucumber (Gy14) v1	cgycuB251
Csa5G188900	Cucsa.066660	Cucumber (Gy14) v1	cgycuB056
Csa5G188900	CmaCh03G003930	Cucurbita maxima (Rimu)	cmacuB677
Csa5G188900	CmaCh04G001820	Cucurbita maxima (Rimu)	cmacuB747
Csa5G188900	CmoCh03G004060	Cucurbita moschata (Rifu)	cmocuB666
Csa5G188900	CmoCh04G001840	Cucurbita moschata (Rifu)	cmocuB737
Csa5G188900	Cp4.1LG01g05130	Cucurbita pepo (Zucchini)	cpecuB438
Csa5G188900	Cp4.1LG10g08210	Cucurbita pepo (Zucchini)	cpecuB084
Csa5G188900	CsGy4G014610	Cucumber (Gy14) v2	cgybcuB178
Csa5G188900	Carg18345	Silver-seed gourd	carcuB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa5G188900	Csa4G303110	Cucumber (Chinese Long) v2	cucuB139

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G188900	Silver-seed gourd	carcuB0292
Csa5G188900	Silver-seed gourd	carcuB0694
Csa5G188900	Silver-seed gourd	carcuB1014
Csa5G188900	Wax gourd	cuwgoB513
Csa5G188900	Cucumber (Chinese Long) v2	cucuB101
Csa5G188900	Cucurbita maxima (Rimu)	cmacuB746
Csa5G188900	Cucurbita moschata (Rifu)	cmocuB736
Csa5G188900	Cucurbita pepo (Zucchini)	cpecuB437
Csa5G188900	Bottle gourd (USVL1VR-Ls)	culsiB341
Csa5G188900	Cucumber (Gy14) v2	cgybcuB224