Csa5G188900.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G188900.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein At2g39855/T5I7.3
Location	Chr5 : 8496803 .. 8498505 (+)
Sequence length	618

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACAAGAAGCTGCAAGTTGCTACGTCTTCCTCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGATATTTTGGCTCTATGTTCCCGCCACCGGTTGGTACTTCAATTTCAACTACTTGGATTTGTTTTTTTAGTCTCTCCCTTTCAATGTATCTCTTTCTCTGTTTTTCTCTTTCTTTCTCTTTAGATATGGATTTCCTGAACTGGGTCATTTTCATTCTTTAGCAGTTCCTTGTTGGTTTTGCATGTTTCAAGTTGTTGATGATATGACAACTTAAAATTAGACAGAACTGGAATAAGAAAGCTTCTTGGTTAAGAAATCAAAGTAAAATGCAAGTTTGGTTTCTTTCTAATAAAGATAGAAAGTACTTGTTAAAGGAACCCAAAAGTGGTCCTGTACTGTTCTGTTCTATATGAAAAATTTCATGGGATTTTAAAGTTTACTTTGAACTTTGTCTCTGATTCTAGGTGGTAGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCATTGCTGAAGTTGGGAATCCAGGTTTTTCTAACCTTCTAAAACATGAACTTGATCACATTTCTCTCACAAAGGAAAAGAAGACCATGTCTAATCTAATCCTATCCAATCTCTCATACAATTTTCACTGTTGAATAATTTTACAAATGATATTAACTTCTCCATTTATTTAAAACTAGCTTTTGTTCCTCTCAGATAATGCTACTATAAATGGCAAAAAAGGAACTGGTGGTGCAAGTGGGAAAGATGAAAGCTCCATGTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGCGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAGTCCCATCCTAATGTAAGCATTTCAAAATGCTCACGTGCTATCTTTCTTGTAGTTTACTTTAGTGTTTGGATAAAACTAGAAGCCTTTTGGTTAAAATACCCTTTTTGGTCACTATACTTTGTAACTTGTTCTATTTTAGTCCCTATACTTTCAAATGTCCAATTTTAGGTCTCATACTTTCACAAAATCTAAATATTAGTTCCTACCTTTAATTCATGATTAATATTTCTGACATGAAAAGATTTGATAATGATGCGATATTGCTTTGTAAAGTGTTACTGTTGTCTTCATATACATACTGATATTACTAAATCCTTTATCAGTTTAAGAAAGAAGTGAAAGACAATGATGCAAATGAAAGCAATTCAAACCCTGCTTCAAGAGGAAACTGGTGGAAAGGTATGCCATGGATTTGCTATTTGACAAAGAAGAGTTACTGATGGTTAGACAATTTTTTTAACTCAGCAATCTGTTTTCAGGCTCTCTTTATTACTAACGCTCCACCTATATGATGGGATTTGTCACCTGCATAGGTATACCAAAATATCCTCTCGGTTACTCCTAGGCGTACGTTGTTTATTTTGTGTTTTTTCATGAATGTTTTCTTCCATTTTCGATATATTTCAGATCATTATATTGATTTCAGGCAATCACTGATGTATTTTTCACCATGGATTTGCTCTGTTCCTATCCCATCATCCCAGTTTACTAACATTCAGTTATTTGATTATGTTCTAGGATTTGGTGACAGTATAATCGACATTATATTATCATTTACAAGCTTAGCTACCATATTATAG

mRNA sequence

ATGGAAAACAAGAAGCTGCAAGTTGCTACGTCTTCCTCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGATATTTTGGCTCTATGTTCCCGCCACCGGTGGTAGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCATTGCTGAAGTTGGGAATCCAGATAATGCTACTATAAATGGCAAAAAAGGAACTGGTGGTGCAAGTGGGAAAGATGAAAGCTCCATGTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGCGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAGTCCCATCCTAATTTTAAGAAAGAAGTGAAAGACAATGATGCAAATGAAAGCAATTCAAACCCTGCTTCAAGAGGAAACTGGTGGAAAGATCATTATATTGATTTCAGGCAATCACTGATGTATTTTTCACCATGGATTTGCTCTGTTCCTATCCCATCATCCCAGTTTACTAACATTCAGTTATTTGATTATGTTCTAGGATTTGGTGACAGTATAATCGACATTATATTATCATTTACAAGCTTAGCTACCATATTATAG

Coding sequence (CDS)

ATGGAAAACAAGAAGCTGCAAGTTGCTACGTCTTCCTCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGATATTTTGGCTCTATGTTCCCGCCACCGGTGGTAGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCATTGCTGAAGTTGGGAATCCAGATAATGCTACTATAAATGGCAAAAAAGGAACTGGTGGTGCAAGTGGGAAAGATGAAAGCTCCATGTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGCGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAGTCCCATCCTAATTTTAAGAAAGAAGTGAAAGACAATGATGCAAATGAAAGCAATTCAAACCCTGCTTCAAGAGGAAACTGGTGGAAAGATCATTATATTGATTTCAGGCAATCACTGATGTATTTTTCACCATGGATTTGCTCTGTTCCTATCCCATCATCCCAGTTTACTAACATTCAGTTATTTGATTATGTTCTAGGATTTGGTGACAGTATAATCGACATTATATTATCATTTACAAGCTTAGCTACCATATTATAG

Protein sequence

MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSIAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQSHPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQLFDYVLGFGDSIIDIILSFTSLATIL*

Homology

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BLAST of Csa5G188900.1 vs. TrEMBL
Match: A0A0A0KNZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G188900 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-114
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180
           HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180

Query: 181 FDYVLGFGDSIIDIILSFTSLATIL 206
           FDYVLGFGDSIIDIILSFTSLATIL
Sbjct: 181 FDYVLGFGDSIIDIILSFTSLATIL 205

[Close]

BLAST of Csa5G188900.1 vs. TrEMBL
Match: W9S7I3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010379 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-34
Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1


Query: 3   NKKLQVATSSSSSLDHIFGPMDS-NSASSTSTTGYFGSMFPPP--VVERERKKDVGNQVS 62
           N    V     SSLD++FGP DS NSASS+STTG FGS+FPPP  V  RE K+ +GNQ+ 
Sbjct: 8   NNNKNVVGHGYSSLDYLFGPKDSSNSASSSSTTGLFGSIFPPPSTVHGRENKRHLGNQLG 67

Query: 63  IAEVGNPDNATINGKKG-TGGASGKDESSMYQNETM-EPSYFSSSIFYGGQENYSPRTNA 122
            ++   P+N     +KG + G + KD  S+YQNET+ EP YFSSSI+YGGQENYSPRT  
Sbjct: 68  SSKYEKPENMYSQSRKGESSGVTSKD--SIYQNETVAEPCYFSSSIYYGGQENYSPRTRT 127

Query: 123 SQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           ++S  +FKK+  ++D N +NSN ASRGNWW+
Sbjct: 128 TESQHSFKKDGSEDDPNGNNSNSASRGNWWQ 156

[Close]

BLAST of Csa5G188900.1 vs. TrEMBL
Match: B9SE36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1483210 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.2e-34
Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVE--RERKKDVGNQV 60
           MENK+     + +SSLDH+FGP DS+S+SS+S++  FGS+F PP +   R+    +GNQ 
Sbjct: 1   MENKR----QTGASSLDHLFGPKDSSSSSSSSSS-VFGSIFSPPSMGMGRDSAGIMGNQA 60

Query: 61  SIAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNAS 120
             ++ G PDN T + K    G  GKD SS YQNET EP YFSSSI+YGGQENYSPRT  S
Sbjct: 61  GNSKYGIPDNVTQSNKGSNSGIMGKDSSSFYQNETAEPCYFSSSIYYGGQENYSPRTRNS 120

Query: 121 QSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           +SH   KK+ K +D N ++SN ASRGNWW+
Sbjct: 121 ESHV-LKKDDKKDDPNGNSSNSASRGNWWQ 144

[Close]

BLAST of Csa5G188900.1 vs. TrEMBL
Match: B9HHI7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06200g PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.9e-33
Identity = 82/150 (54.67%), Postives = 99/150 (66.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPP--VVERERKKDVGNQV 60
           MEN + QV    +SS DH+FGP DS+S+SS S+ G FGS+FPPP  V         GN V
Sbjct: 1   MENNR-QVG---ASSFDHLFGPKDSSSSSSASS-GIFGSIFPPPSKVPAGRDSGTTGNHV 60

Query: 61  SIAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNAS 120
                 NPDNAT   K  + G SGK +SS+YQNET EP YFSSSI+YGGQENYSPRT  S
Sbjct: 61  GNETYVNPDNATRKAKGESSGISGKGQSSVYQNETPEPCYFSSSIYYGGQENYSPRTKNS 120

Query: 121 QSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           +S   FKK+   +D N ++ N ASRGNWW+
Sbjct: 121 ESQHVFKKDYGKDDPNGNDPNSASRGNWWQ 145

[Close]

BLAST of Csa5G188900.1 vs. TrEMBL
Match: K7KAP3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G252500 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.8e-32
Identity = 79/151 (52.32%), Postives = 102/151 (67.55%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSL--DHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQV 60
           M N K Q   SSSS++  DH+FGP DS+S +S+ST G FGS+FPPP         VG + 
Sbjct: 1   MANNKKQAGGSSSSTMKFDHLFGPKDSSSTTSSST-GLFGSIFPPP-------PSVGGRE 60

Query: 61  S-IAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNA 120
           S + EVG P   T N  + +   S K+ S+ YQNET+EPSYFSSSI+YGGQENYSPR+  
Sbjct: 61  SRMQEVGAPGTQT-NKSESSSRISNKNTSTNYQNETVEPSYFSSSIYYGGQENYSPRSRT 120

Query: 121 SQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           +Q H  FKK+  D D+N ++SN A+RGNWW+
Sbjct: 121 TQPHHVFKKDKDDGDSNSNDSNSAARGNWWQ 142

[Close]

BLAST of Csa5G188900.1 vs. TAIR10
Match: AT3G55646.1 (AT3G55646.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 7.4e-22
Identity = 65/148 (43.92%), Postives = 83/148 (56.08%), Query Frame = 1


Query: 4   KKLQVATSSSSSL---DHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 63
           KK+  A+SSSSSL   DHIFGP  S+S+SS S TG F S+FPPP  ++     +G QV  
Sbjct: 8   KKIVSASSSSSSLSSFDHIFGPRVSSSSSS-SATGLFKSIFPPPSADQ-----LGRQVDF 67

Query: 64  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 123
           A  G          KG   ++ K++ S Y  ET  P + SSS++YGGQE YS  T  + +
Sbjct: 68  ASQGGHVKYQSPNAKGER-SNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTT--TTT 127

Query: 124 HPNFKKEVKDNDANESNSNPASRGNWWK 149
           H  +KK     D  E +S  ASRGNWW+
Sbjct: 128 HDTYKK-----DGEEGDSKRASRGNWWE 141

[Close]

BLAST of Csa5G188900.1 vs. TAIR10
Match: AT5G05965.1 (AT5G05965.1 unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 6.5e-18
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1


Query: 1   MENKKLQVATSS-SSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVS 60
           M+ KK + A+SS SSS D++FGP  S SASS ST     S+FPPPV    RKK  G+  +
Sbjct: 1   MDIKKTKAASSSHSSSFDNLFGPKGSASASSCSTI--LDSIFPPPVA---RKK--GSHTA 60

Query: 61  IAEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYS-PRTNAS 120
               GN   AT             DE S +  E  E SY+SSSI+YGGQ++YS PRT+ S
Sbjct: 61  PEVQGNISQAT-------------DERSSH--EKRESSYYSSSIYYGGQQHYSPPRTDGS 120

Query: 121 QSHPNFKKEVKDNDANESNSNPASRGNWWK 149
            + P+ + + + ND  +  ++  SRGNWWK
Sbjct: 121 STSPSHQPK-ETNDRTDITTS-TSRGNWWK 126

[Close]

BLAST of Csa5G188900.1 vs. TAIR10
Match: AT2G39855.1 (AT2G39855.1 unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 1


Query: 9   ATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSIAEVGNPDN 68
           ++SSSSSLDHIFGP  S+S SS STTG F S+FPPP    +      N  +  +  N + 
Sbjct: 11  SSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGAAKYQPTNFET 70

Query: 69  ATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRT 116
               G++    +  K+  S    ET  P   SSSI+YGGQ+NYS  T
Sbjct: 71  PNERGER----SKNKERKSYQSEETQPPCNLSSSIYYGGQDNYSSST 112

[Close]

BLAST of Csa5G188900.1 vs. TAIR10
Match: AT5G02020.1 (AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12
Identity = 52/155 (33.55%), Postives = 77/155 (49.68%), Query Frame = 1


Query: 1   MENKKLQVATSS---SSSL-DHIFGPMDSNSASSTSTTGYFGSMFPPP--VVERERKKDV 60
           ME +K + ++SS   SSSL   +FG  ++   SS S++G  GS+FPPP  V+ RE    V
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSREN--PSSPSSSGILGSIFPPPSKVLGRE---SV 60

Query: 61  GNQVSIAEVGNPDNATINGKKGTGGASGKDESSMY-QNETMEPSYFSSSIFYGGQENYSP 120
             +       N   +   G         ++  S Y Q++ ++P + SSSI+YGG + Y  
Sbjct: 61  RQETVTGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ 120

Query: 121 RTNASQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
             N++ +  N K      D  E +S  ASRGNWW+
Sbjct: 121 PQNSTSNSTNKK------DGGEDDSGSASRGNWWQ 144

[Close]

BLAST of Csa5G188900.1 vs. TAIR10
Match: AT5G59080.1 (AT5G59080.1 unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 6.9e-12
Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 1


Query: 9   ATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSIAEVGNPDN 68
           +++SSS    +FG  D +  SS+S  G F +MFP P                    +  +
Sbjct: 11  SSTSSSFTAELFGSKDPSPPSSSS--GIFSTMFPHP--------------------SKGS 70

Query: 69  ATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQSHP---NFK 128
           A        G  + + ES   Q + +EP + SSS++YGGQ+ Y+ R+  +Q++P   N +
Sbjct: 71  ARDGSNSKHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYA-RSTTNQTYPPVKNDR 130

Query: 129 KEVKDNDANESNSNPASRGNWWK 149
           +   ++DAN  N    SRGNWW+
Sbjct: 131 RRSGEDDANGQNPQDVSRGNWWQ 130

[Close]

BLAST of Csa5G188900.1 vs. NCBI nr
Match: gi|700195417|gb|KGN50594.1| (hypothetical protein Csa_5G188900 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.0e-114
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180
           HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180

Query: 181 FDYVLGFGDSIIDIILSFTSLATIL 206
           FDYVLGFGDSIIDIILSFTSLATIL
Sbjct: 181 FDYVLGFGDSIIDIILSFTSLATIL 205

[Close]

BLAST of Csa5G188900.1 vs. NCBI nr
Match: gi|778701139|ref|XP_011654971.1| (PREDICTED: uncharacterized protein LOC105435461 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 7.3e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 149
           HPNFKKEVKDNDANESNSNPASRGNWWK
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 148

[Close]

BLAST of Csa5G188900.1 vs. NCBI nr
Match: gi|659129881|ref|XP_008464894.1| (PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 4.4e-77
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60
           ME+KKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVS 
Sbjct: 1   MESKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVST 60

Query: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
           AEVGNPDNATINGKKGTG ASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGDASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 149
           HPNFKKE KDNDANESNSNPASRGNWWK
Sbjct: 121 HPNFKKEGKDNDANESNSNPASRGNWWK 148

[Close]

BLAST of Csa5G188900.1 vs. NCBI nr
Match: gi|802548367|ref|XP_012091167.1| (PREDICTED: uncharacterized protein LOC105649193 [Jatropha curcas])

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-36
Identity = 86/161 (53.42%), Postives = 110/161 (68.32%), Query Frame = 1


Query: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKD----VGN 60
           MENKK  V  SS+SSLDH+FGP DS+S+SS+S++  FGS+F PP      ++D    +GN
Sbjct: 1   MENKKHGVG-SSASSLDHLFGPKDSSSSSSSSSSSVFGSIFSPPSSSTGLRRDSAGIMGN 60

Query: 61  QVSIAEVGNP--------DNATINGKKGTGGASGKD-ESSMYQNETMEPSYFSSSIFYGG 120
           Q    + GNP        ++     +   GG SGKD  SS+YQNET EP YFSSSI+YGG
Sbjct: 61  QTGNIKYGNPGMSMHKLYESRYNTAQSNKGGISGKDTSSSVYQNETAEPCYFSSSIYYGG 120

Query: 121 QENYSPRTNASQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           QENYSPRTN  +SH +FKKE K++D N +N+N ASRGNWW+
Sbjct: 121 QENYSPRTNNPESHHSFKKEDKNDDPNGNNANSASRGNWWQ 160

[Close]

BLAST of Csa5G188900.1 vs. NCBI nr
Match: gi|703144792|ref|XP_010108371.1| (hypothetical protein L484_010379 [Morus notabilis])

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-34
Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1


Query: 3   NKKLQVATSSSSSLDHIFGPMDS-NSASSTSTTGYFGSMFPPP--VVERERKKDVGNQVS 62
           N    V     SSLD++FGP DS NSASS+STTG FGS+FPPP  V  RE K+ +GNQ+ 
Sbjct: 8   NNNKNVVGHGYSSLDYLFGPKDSSNSASSSSTTGLFGSIFPPPSTVHGRENKRHLGNQLG 67

Query: 63  IAEVGNPDNATINGKKG-TGGASGKDESSMYQNETM-EPSYFSSSIFYGGQENYSPRTNA 122
            ++   P+N     +KG + G + KD  S+YQNET+ EP YFSSSI+YGGQENYSPRT  
Sbjct: 68  SSKYEKPENMYSQSRKGESSGVTSKD--SIYQNETVAEPCYFSSSIYYGGQENYSPRTRT 127

Query: 123 SQSHPNFKKEVKDNDANESNSNPASRGNWWK 149
           ++S  +FKK+  ++D N +NSN ASRGNWW+
Sbjct: 128 TESQHSFKKDGSEDDPNGNNSNSASRGNWWQ 156

The following BLAST results are available for this feature:

BLAST of Csa5G188900.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNZ9_CUCSA	1.4e-114	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G188900 PE=4 SV=1	[more]
W9S7I3_9ROSA	2.5e-34	54.30	Uncharacterized protein OS=Morus notabilis GN=L484_010379 PE=4 SV=1	[more]
B9SE36_RICCO	7.2e-34	54.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1483210 PE=4 SV=1	[more]
B9HHI7_POPTR	7.9e-33	54.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06200g PE=4 SV=1	[more]
K7KAP3_SOYBN	8.8e-32	52.32	Uncharacterized protein OS=Glycine max GN=GLYMA_02G252500 PE=4 SV=1	[more]

BLAST of Csa5G188900.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55646.1	7.4e-22	43.92	unknown protein	[more]
AT5G05965.1	6.5e-18	43.33	unknown protein	[more]
AT2G39855.1	3.3e-14	42.99	unknown protein	[more]
AT5G02020.1	2.4e-12	33.55	Encodes a protein involved in salt tolerance, names SIS (Salt Induce...	[more]
AT5G59080.1	6.9e-12	30.77	unknown protein	[more]

BLAST of Csa5G188900.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195417\|gb\|KGN50594.1\|	2.0e-114	100.00	hypothetical protein Csa_5G188900 [Cucumis sativus]	[more]
gi\|778701139\|ref\|XP_011654971.1\|	7.3e-80	100.00	PREDICTED: uncharacterized protein LOC105435461 [Cucumis sativus]	[more]
gi\|659129881\|ref\|XP_008464894.1\|	4.4e-77	97.30	PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo]	[more]
gi\|802548367\|ref\|XP_012091167.1\|	3.8e-36	53.42	PREDICTED: uncharacterized protein LOC105649193 [Jatropha curcas]	[more]
gi\|703144792\|ref\|XP_010108371.1\|	3.5e-34	54.30	hypothetical protein L484_010379 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa5G188900	Csa5G188900	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa5G188900.1	Csa5G188900.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa5G188900.1.cds1	Csa5G188900.1.cds1	CDS
Csa5G188900.1.cds2	Csa5G188900.1.cds2	CDS
Csa5G188900.1.cds3	Csa5G188900.1.cds3	CDS
Csa5G188900.1.cds4	Csa5G188900.1.cds4	CDS
Csa5G188900.1.cds5	Csa5G188900.1.cds5	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33738	FAMILY NOT NAMED	coord: 2..161 score: 1.9
None	No IPR available	PANTHER	PTHR33738:SF2	SUBFAMILY NOT NAMED	coord: 2..161 score: 1.9