Lsi04G009260 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G009260
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Locationchr04 : 9516938 .. 9518875 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTTGTGTGTCTGAAATCTTCACGTGGGTCTGCTCCATCTCTTTCTGTTTCTGTCTGCATATTATCTGTTTGTTTTTTAGTCTGACTGGAAAACCTTATCGAGTTTTCTCTTCTTTTGTTTTGTTTTGTTTTTCTTTTTCTTTATATGGGTCTGGGCCGTTAAGAGATAACTATCAGGTTTAGGGAGTAGTTTTGTTCGTTGGCTGACAGAGAAAGCTCCCACTGTTAGGTACTATGGAGAACAAGAAGCAAGTGGCTACCTCTTCATCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGTTATTTTGGCTCTATTTTCCCACCACCGGTTGGTACTTCAATTCATTTTTAATATCTCCCTTTCATGCTCTATCTCTCTCTTTTTCTCTTTAGATGTGGGTTTCCTGAACTAGGTCATTTTCATTGAGTTGCTTGTTGATTTTGCATGTTTCAAGTTGATGATATGACAGCTTAACATTAGGCAGAATTGGAATAAGAAAGCTTCTTAGTTAGGGAATCAAAGTAATGGAAGCTTAGTTTCTTTCTAATGGAGATACAAAGTACTTGTTAAAGGGAAGTAGGGAACCCAAAAATGGTCCTGTTTTGTGCTGTTCTATATGAAAATTTTTGTGGGATTTAAAAGCGTACATTGAACTTTTTCTCTGATTTTAGGTGGTGGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCACTGGCGAAGTTGGGAATCCAGGTTTTTCTATCCTTCTAAAACTTGAACTTGAACACACCTACCTCATAAAGGATAAGAAGCCTATGTCTAACCTACCTAATCTCTCATGATTTTCACTATTGAATAGTTTTTCAAATGATATAAACTTCTCCATTTATGTAAAACTGGCTTTTTTTCCTCTCAGCTAATGCTTCTGTAAATGGCAAAAAAGAAACTGGTGGTGGAAATGGGAAAGATGAAAGCTCCATTTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGTGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAATCCCATCATAATGTAAGCATTTTAAAATGTTCATGTGCCACCTTTCTTGTAGTTTTCTTTAGTCCCTATACTTATGAGATCGAAGAAAAACAAATATAATCACACAAAACGGGGCTACAAATCTATAGGAAAAAGATAAACATGTTCCTATCAAGATGTGAAAAAAAAATTGTTTTTTGTTCAATCATAGCATCATCGGTCACCGCTCTTGAGTTATAATCTACTTCAAATGTCGAGATTTAGCCTTCATACTTTCAATAAATCTTAAAGCCAGTCCCTACCTTTGGTTCATGACTAATTTTTCCAAAAACATAATTAGTCTCCGTCAACCTTCCTTCTCTAAATTTTGAAATCATATTCGCACTGTGTCTTTTCTGAAATGTTGGAATGAAAATTTGATTACTATTTTCCCAAGTTAGATCAAAATTAACTTTAAACTAACCATGATGACTAAATTTAAGATTTGTTGAAAGTGCAGACTAAATTTATGTTCAAAAGTATAGGGACTAAAATGAAACTAATCTCAAGGTGTATTTTAGCAAAGGGTATTTTTTTTCTTTGGGGATCTTAATAGACATATGAAAAGATCTGATAATGATGCGATATTGCTTTGGAAAGTGATACTGTTGTGTTCATTACTTGATGATACATACTGATGTTATGAAAACCTTCATCAGTTTAAGAAAGAAGGGAAAGACAACGATGCAAATGAAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAAGGTATGACAACTTCCATGGATTTATTGTTTGACAAAGAAGAGTTGCTGATGATGTTAAGACAATTTTTTTTAAACTCACAATCTGTTTTC

mRNA sequence

GTCTTGTGTGTCTGAAATCTTCACGTGGGTCTGCTCCATCTCTTTCTGTTTCTGTCTGCATATTATCTAGAAAGCTCCCACTGTTAGGTACTATGGAGAACAAGAAGCAAGTGGCTACCTCTTCATCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGTTATTTTGGCTCTATTTTCCCACCACCGGTGGTGGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCACTGGCGAAGTTGGGAATCCAGCTAATGCTTCTGTAAATGGCAAAAAAGAAACTGGTGGTGGAAATGGGAAAGATGAAAGCTCCATTTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGTGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAATCCCATCATAATTTTAAGAAAGAAGGGAAAGACAACGATGCAAATGAAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAAGGTATGACAACTTCCATGGATTTATTGTTTGACAAAGAAGAGTTGCTGATGATGTTAAGACAATTTTTTTTAAACTCACAATCTGTTTTC

Coding sequence (CDS)

ATGGAGAACAAGAAGCAAGTGGCTACCTCTTCATCTTCAAGTTTGGATCATATTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCCACAACTGGTTATTTTGGCTCTATTTTCCCACCACCGGTGGTGGAGAGAGAGAGAAAAAAGGATGTTGGAAATCAAGTTAGCACTGGCGAAGTTGGGAATCCAGCTAATGCTTCTGTAAATGGCAAAAAAGAAACTGGTGGTGGAAATGGGAAAGATGAAAGCTCCATTTATCAGAATGAAACTATGGAACCAAGTTACTTTAGTTCTTCCATCTTTTATGGTGGCCAAGAAAATTACTCCCCAAGAACCAATGCCTCACAATCCCATCATAATTTTAAGAAAGAAGGGAAAGACAACGATGCAAATGAAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAAGGTATGACAACTTCCATGGATTTATTGTTTGACAAAGAAGAGTTGCTGATGATGTTAAGACAATTTTTTTTAAACTCACAATCTGTTTTC

Protein sequence

MENKKQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVSTGEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQSHHNFKKEGKDNDANESNSNSASRGNWWKGMTTSMDLLFDKEELLMMLRQFFLNSQSVF
Homology
[Close]
BLAST of Lsi04G009260 vs. TrEMBL
Match: A0A0A0KNZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G188900 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.8e-65
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 1 

Query: 1   MENKK-QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVST 60
           MENKK QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGS+FPPPVVERERKKDVGNQVS 
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  GEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
            EVGNP NA++NGKK TGG +GKDESS+YQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HHNFKKEGKDNDANESNSNSASRGNWWK 148
           H NFKKE KDNDANESNSN ASRGNWWK
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 148

[Close]
BLAST of Lsi04G009260 vs. TrEMBL
Match: W9S7I3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010379 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-33
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 1 

Query: 3   NKKQVATSSSSSLDHIFGPMDS-NSASSTSTTGYFGSIFPPP--VVERERKKDVGNQVST 62
           N K V     SSLD++FGP DS NSASS+STTG FGSIFPPP  V  RE K+ +GNQ+ +
Sbjct: 9   NNKNVVGHGYSSLDYLFGPKDSSNSASSSSTTGLFGSIFPPPSTVHGRENKRHLGNQLGS 68

Query: 63  GEVGNPANA-SVNGKKETGGGNGKDESSIYQNETM-EPSYFSSSIFYGGQENYSPRTNAS 122
            +   P N  S + K E+ G   KD  SIYQNET+ EP YFSSSI+YGGQENYSPRT  +
Sbjct: 69  SKYEKPENMYSQSRKGESSGVTSKD--SIYQNETVAEPCYFSSSIYYGGQENYSPRTRTT 128

Query: 123 QSHHNFKKEGKDNDANESNSNSASRGNWWKG 149
           +S H+FKK+G ++D N +NSNSASRGNWW+G
Sbjct: 129 ESQHSFKKDGSEDDPNGNNSNSASRGNWWQG 157

[Close]
BLAST of Lsi04G009260 vs. TrEMBL
Match: B9HHI7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06200g PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.4e-31
Identity = 84/150 (56.00%), Postives = 102/150 (68.00%), Query Frame = 1 

Query: 1   MENKKQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPP--VVERERKKDVGNQVS 60
           MEN +QV    +SS DH+FGP DS+S+SS S+ G FGSIFPPP  V         GN V 
Sbjct: 1   MENNRQVG---ASSFDHLFGPKDSSSSSSASS-GIFGSIFPPPSKVPAGRDSGTTGNHVG 60

Query: 61  TGEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQ 120
                NP NA+   K E+ G +GK +SS+YQNET EP YFSSSI+YGGQENYSPRT  S+
Sbjct: 61  NETYVNPDNATRKAKGESSGISGKGQSSVYQNETPEPCYFSSSIYYGGQENYSPRTKNSE 120

Query: 121 SHHNFKKEGKDNDANESNSNSASRGNWWKG 149
           S H FKK+   +D N ++ NSASRGNWW+G
Sbjct: 121 SQHVFKKDYGKDDPNGNDPNSASRGNWWQG 146

[Close]
BLAST of Lsi04G009260 vs. TrEMBL
Match: B9SE36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1483210 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.2e-30
Identity = 83/150 (55.33%), Postives = 105/150 (70.00%), Query Frame = 1 

Query: 1   MENKKQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVE--RERKKDVGNQVS 60
           MENK+Q   + +SSLDH+FGP DS+S+SS+S++  FGSIF PP +   R+    +GNQ  
Sbjct: 1   MENKRQ---TGASSLDHLFGPKDSSSSSSSSSS-VFGSIFSPPSMGMGRDSAGIMGNQAG 60

Query: 61  TGEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQ 120
             + G P N + + K    G  GKD SS YQNET EP YFSSSI+YGGQENYSPRT  S+
Sbjct: 61  NSKYGIPDNVTQSNKGSNSGIMGKDSSSFYQNETAEPCYFSSSIYYGGQENYSPRTRNSE 120

Query: 121 SHHNFKKEGKDNDANESNSNSASRGNWWKG 149
           SH   KK+ K +D N ++SNSASRGNWW+G
Sbjct: 121 SHV-LKKDDKKDDPNGNSSNSASRGNWWQG 145

[Close]
BLAST of Lsi04G009260 vs. TrEMBL
Match: A0A0B2PZJ1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037541 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-28
Identity = 81/149 (54.36%), Postives = 104/149 (69.80%), Query Frame = 1 

Query: 3   NKKQVATSSSSSL--DHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVST- 62
           NKKQ   SSSS++  DH+FGP DS+S +S+ST G FGSIFPPP         VG + S  
Sbjct: 4   NKKQAGGSSSSTMKFDHLFGPKDSSSTTSSST-GLFGSIFPPP-------PSVGGRESRM 63

Query: 63  GEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 122
            EVG P   + N  + +   + K+ S+ YQNET+EPSYFSSSI+YGGQENYSPR+  +Q 
Sbjct: 64  QEVGAPGTQT-NKSESSSRISNKNTSTNYQNETVEPSYFSSSIYYGGQENYSPRSRTTQP 123

Query: 123 HHNFKKEGKDNDANESNSNSASRGNWWKG 149
           HH FKK+  D D+N ++SNSA+RGNWW+G
Sbjct: 124 HHVFKKDKDDGDSNSNDSNSAARGNWWQG 143

[Close]
BLAST of Lsi04G009260 vs. TAIR10
Match: AT3G55646.1 (AT3G55646.1 unknown protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-19
Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 1 

Query: 2   ENKKQVATSSSSS-----LDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQ 61
           +NKK++ ++SSSS      DHIFGP  S+S+SS S TG F SIFPPP  ++     +G Q
Sbjct: 5   KNKKKIVSASSSSSSLSSFDHIFGPRVSSSSSS-SATGLFKSIFPPPSADQ-----LGRQ 64

Query: 62  VS-TGEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTN 121
           V    + G+    S N K E    N K++ S Y  ET  P + SSS++YGGQE YS  T 
Sbjct: 65  VDFASQGGHVKYQSPNAKGERS--NKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTT- 124

Query: 122 ASQSHHNFKKEGKDNDANESNSNSASRGNWWKG 149
            + +H  +KK+G++ D     S  ASRGNWW+G
Sbjct: 125 -TTTHDTYKKDGEEGD-----SKRASRGNWWEG 142

[Close]
BLAST of Lsi04G009260 vs. TAIR10
Match: AT5G05965.1 (AT5G05965.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 

Query: 1   MENKKQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVSTG 60
           ++  K  ++S SSS D++FGP  S SASS ST     SIFPPPV    RKK  G+  +  
Sbjct: 3   IKKTKAASSSHSSSFDNLFGPKGSASASSCSTI--LDSIFPPPVA---RKK--GSHTAPE 62

Query: 61  EVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSP-RTNASQS 120
             GN + A+             DE S   +E  E SY+SSSI+YGGQ++YSP RT+ S +
Sbjct: 63  VQGNISQAT-------------DERS--SHEKRESSYYSSSIYYGGQQHYSPPRTDGSST 122

Query: 121 HHNFKKEGKDNDANESNSNSASRGNWWKG 149
             + +   K+ +     + S SRGNWWKG
Sbjct: 123 SPSHQP--KETNDRTDITTSTSRGNWWKG 127

[Close]
BLAST of Lsi04G009260 vs. TAIR10
Match: AT2G39855.1 (AT2G39855.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12
Identity = 54/118 (45.76%), Postives = 64/118 (54.24%), Query Frame = 1 

Query: 1   MENKKQVA---TSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQV 60
           M+ KK V+   +SSSSSLDHIFGP  S+S SS STTG F SIFPPP    +     GN  
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQ-----GNLT 60

Query: 61  STGEVGNPANASVNGKKETGGGNGKDESSIYQNE-TMEPSYFSSSIFYGGQENYSPRT 115
           S          +     E G  +   E   YQ+E T  P   SSSI+YGGQ+NYS  T
Sbjct: 61  SRNGAAKYQPTNFETPNERGERSKNKERKSYQSEETQPPCNLSSSIYYGGQDNYSSST 112

[Close]
BLAST of Lsi04G009260 vs. TAIR10
Match: AT5G02020.1 (AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).)

HSP 1 Score: 65.5 bits (158), Expect = 3.8e-11
Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 1 

Query: 1   MENKKQVATSSS----SSL-DHIFGPMDSNSASSTSTTGYFGSIFPPP--VVERERKKDV 60
           ME +K+ A+SSS    SSL   +FG  ++   SS S++G  GSIFPPP  V+ RE    V
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSREN--PSSPSSSGILGSIFPPPSKVLGRE---SV 60

Query: 61  GNQVSTGEVGNPANASVNGKKETGGGNGKDESSIYQ-NETMEPSYFSSSIFYGGQENYSP 120
             +  TG   N   +   G  +      ++  S YQ ++ ++P + SSSI+YGG + Y  
Sbjct: 61  RQETVTGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ 120

Query: 121 RTNASQSHHNFKKEGKDNDANESNSNSASRGNWWKG 149
             N++ +  N K      D  E +S SASRGNWW+G
Sbjct: 121 PQNSTSNSTNKK------DGGEDDSGSASRGNWWQG 145

[Close]
BLAST of Lsi04G009260 vs. TAIR10
Match: AT5G59080.1 (AT5G59080.1 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-08
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 1 

Query: 1   MENKKQVATSSSSSLD---HIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQV 60
           ME K +V +SSS+S      +FG  D +  SS+S  G F ++FP P              
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSS--GIFSTMFPHP-------------- 60

Query: 61  STGEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNAS 120
           S G   + +N+    + +      + ES   Q + +EP + SSS++YGGQ+ Y+ R+  +
Sbjct: 61  SKGSARDGSNSKHGSQAQ------RRESLNAQEDRVEPCHLSSSLYYGGQDVYA-RSTTN 120

Query: 121 QSH---HNFKKEGKDNDANESNSNSASRGNWWKG 149
           Q++    N ++   ++DAN  N    SRGNWW+G
Sbjct: 121 QTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQG 131

[Close]
BLAST of Lsi04G009260 vs. NCBI nr
Match: gi|659129881|ref|XP_008464894.1| (PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 8.8e-66
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 1 

Query: 1   MENKK-QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVST 60
           ME+KK QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGS+FPPPVVERERKKDVGNQVST
Sbjct: 1   MESKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVST 60

Query: 61  GEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
            EVGNP NA++NGKK TG  +GKDESS+YQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGDASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HHNFKKEGKDNDANESNSNSASRGNWWKG 149
           H NFKKEGKDNDANESNSN ASRGNWWKG
Sbjct: 121 HPNFKKEGKDNDANESNSNPASRGNWWKG 149

[Close]
BLAST of Lsi04G009260 vs. NCBI nr
Match: gi|778701139|ref|XP_011654971.1| (PREDICTED: uncharacterized protein LOC105435461 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 1 

Query: 1   MENKK-QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVST 60
           MENKK QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGS+FPPPVVERERKKDVGNQVS 
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  GEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
            EVGNP NA++NGKK TGG +GKDESS+YQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HHNFKKEGKDNDANESNSNSASRGNWWKG 149
           H NFKKE KDNDANESNSN ASRGNWWKG
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWKG 149

[Close]
BLAST of Lsi04G009260 vs. NCBI nr
Match: gi|700195417|gb|KGN50594.1| (hypothetical protein Csa_5G188900 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 9.7e-65
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 1 

Query: 1   MENKK-QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKDVGNQVST 60
           MENKK QVATSSSSSLDHIFGPMDSNSASSTSTTGYFGS+FPPPVVERERKKDVGNQVS 
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  GEVGNPANASVNGKKETGGGNGKDESSIYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120
            EVGNP NA++NGKK TGG +GKDESS+YQNETMEPSYFSSSIFYGGQENYSPRTNASQS
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HHNFKKEGKDNDANESNSNSASRGNWWK 148
           H NFKKE KDNDANESNSN ASRGNWWK
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWK 148

[Close]
BLAST of Lsi04G009260 vs. NCBI nr
Match: gi|802548367|ref|XP_012091167.1| (PREDICTED: uncharacterized protein LOC105649193 [Jatropha curcas])

HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34
Identity = 88/161 (54.66%), Postives = 111/161 (68.94%), Query Frame = 1 

Query: 1   MENKKQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSIFPPPVVERERKKD----VGNQ 60
           MENKK    SS+SSLDH+FGP DS+S+SS+S++  FGSIF PP      ++D    +GNQ
Sbjct: 1   MENKKHGVGSSASSLDHLFGPKDSSSSSSSSSSSVFGSIFSPPSSSTGLRRDSAGIMGNQ 60

Query: 61  VSTGEVGNPANASVN--------GKKETGGGNGKD-ESSIYQNETMEPSYFSSSIFYGGQ 120
               + GNP  +            +   GG +GKD  SS+YQNET EP YFSSSI+YGGQ
Sbjct: 61  TGNIKYGNPGMSMHKLYESRYNTAQSNKGGISGKDTSSSVYQNETAEPCYFSSSIYYGGQ 120

Query: 121 ENYSPRTNASQSHHNFKKEGKDNDANESNSNSASRGNWWKG 149
           ENYSPRTN  +SHH+FKKE K++D N +N+NSASRGNWW+G
Sbjct: 121 ENYSPRTNNPESHHSFKKEDKNDDPNGNNANSASRGNWWQG 161

[Close]
BLAST of Lsi04G009260 vs. NCBI nr
Match: gi|703144792|ref|XP_010108371.1| (hypothetical protein L484_010379 [Morus notabilis])

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 1 

Query: 3   NKKQVATSSSSSLDHIFGPMDS-NSASSTSTTGYFGSIFPPP--VVERERKKDVGNQVST 62
           N K V     SSLD++FGP DS NSASS+STTG FGSIFPPP  V  RE K+ +GNQ+ +
Sbjct: 9   NNKNVVGHGYSSLDYLFGPKDSSNSASSSSTTGLFGSIFPPPSTVHGRENKRHLGNQLGS 68

Query: 63  GEVGNPANA-SVNGKKETGGGNGKDESSIYQNETM-EPSYFSSSIFYGGQENYSPRTNAS 122
            +   P N  S + K E+ G   KD  SIYQNET+ EP YFSSSI+YGGQENYSPRT  +
Sbjct: 69  SKYEKPENMYSQSRKGESSGVTSKD--SIYQNETVAEPCYFSSSIYYGGQENYSPRTRTT 128

Query: 123 QSHHNFKKEGKDNDANESNSNSASRGNWWKG 149
           +S H+FKK+G ++D N +NSNSASRGNWW+G
Sbjct: 129 ESQHSFKKDGSEDDPNGNNSNSASRGNWWQG 157

The following BLAST results are available for this feature:
BLAST of Lsi04G009260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi04G009260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNZ9_CUCSA6.8e-6590.54Uncharacterized protein OS=Cucumis sativus GN=Csa_5G188900 PE=4 SV=1[more]
W9S7I3_9ROSA1.8e-3359.60Uncharacterized protein OS=Morus notabilis GN=L484_010379 PE=4 SV=1[more]
B9HHI7_POPTR6.4e-3156.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06200g PE=4 SV=1[more]
B9SE36_RICCO9.2e-3055.33Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1483210 PE=4 SV=1[more]
A0A0B2PZJ1_GLYSO6.6e-2854.36Uncharacterized protein OS=Glycine soja GN=glysoja_037541 PE=4 SV=1[more]
BLAST of Lsi04G009260 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G55646.12.3e-1943.79 unknown protein[more]
AT5G05965.14.1e-1340.94 unknown protein[more]
AT2G39855.13.5e-1245.76 unknown protein[more]
AT5G02020.13.8e-1137.18 Encodes a protein involved in salt tolerance, names SIS (Salt Induce... [more]
AT5G59080.15.2e-0831.82 unknown protein[more]
BLAST of Lsi04G009260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129881|ref|XP_008464894.1|8.8e-6690.60PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo][more]
gi|778701139|ref|XP_011654971.1|2.0e-6590.60PREDICTED: uncharacterized protein LOC105435461 [Cucumis sativus][more]
gi|700195417|gb|KGN50594.1|9.7e-6590.54hypothetical protein Csa_5G188900 [Cucumis sativus][more]
gi|802548367|ref|XP_012091167.1|4.0e-3454.66PREDICTED: uncharacterized protein LOC105649193 [Jatropha curcas][more]
gi|703144792|ref|XP_010108371.1|2.6e-3359.60hypothetical protein L484_010379 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G009260.1Lsi04G009260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33738FAMILY NOT NAMEDcoord: 2..149
score: 1.6
NoneNo IPR availablePANTHERPTHR33738:SF2SUBFAMILY NOT NAMEDcoord: 2..149
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G009260Csa5G188900Cucumber (Chinese Long) v2culsiB363
Lsi04G009260Csa1G525300Cucumber (Chinese Long) v2culsiB052
Lsi04G009260CSPI05G10070Wild cucumber (PI 183967)cpilsiB366
Lsi04G009260Cucsa.066660Cucumber (Gy14) v1cgylsiB066
Lsi04G009260Cucsa.164910Cucumber (Gy14) v1cgylsiB276
Lsi04G009260CmaCh04G001820Cucurbita maxima (Rimu)cmalsiB677
Lsi04G009260CmaCh03G003930Cucurbita maxima (Rimu)cmalsiB616
Lsi04G009260CmoCh04G001840Cucurbita moschata (Rifu)cmolsiB670
Lsi04G009260CmoCh03G004060Cucurbita moschata (Rifu)cmolsiB603
Lsi04G009260Cla018165Watermelon (97103) v1lsiwmB330
Lsi04G009260Cla003974Watermelon (97103) v1lsiwmB307
Lsi04G009260MELO3C003186Melon (DHL92) v3.5.1lsimeB332
Lsi04G009260MELO3C026564Melon (DHL92) v3.5.1lsimeB281
Lsi04G009260ClCG07G003740Watermelon (Charleston Gray)lsiwcgB295
Lsi04G009260ClCG03G001170Watermelon (Charleston Gray)lsiwcgB280
Lsi04G009260ClCG04G007570Watermelon (Charleston Gray)lsiwcgB282
Lsi04G009260MELO3C026564.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G009260Cla97C07G132070Watermelon (97103) v2lsiwmbB296
Lsi04G009260Bhi07G000592Wax gourdlsiwgoB385
Lsi04G009260Cp4.1LG01g05130Cucurbita pepo (Zucchini)cpelsiB359
Lsi04G009260Carg18345Silver-seed gourdcarlsiB080
Lsi04G009260CsaV3_1G035720Cucumber (Chinese Long) v3cuclsiB058
Lsi04G009260CsaV3_5G008550Cucumber (Chinese Long) v3cuclsiB387
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi04G009260Lsi02G013270Bottle gourd (USVL1VR-Ls)lsilsiB104
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G009260Wax gourdlsiwgoB366
Lsi04G009260Wax gourdlsiwgoB390
Lsi04G009260Bottle gourd (USVL1VR-Ls)lsilsiB077
Lsi04G009260Bottle gourd (USVL1VR-Ls)lsilsiB127
Lsi04G009260Bottle gourd (USVL1VR-Ls)lsilsiB129
Lsi04G009260Cucumber (Gy14) v1cgylsiB217
Lsi04G009260Cucumber (Gy14) v1cgylsiB299
Lsi04G009260Cucurbita maxima (Rimu)cmalsiB244
Lsi04G009260Cucurbita maxima (Rimu)cmalsiB676
Lsi04G009260Cucurbita maxima (Rimu)cmalsiB686
Lsi04G009260Cucurbita maxima (Rimu)cmalsiB756
Lsi04G009260Cucurbita moschata (Rifu)cmolsiB267
Lsi04G009260Cucurbita moschata (Rifu)cmolsiB232
Lsi04G009260Cucurbita moschata (Rifu)cmolsiB669
Lsi04G009260Cucurbita moschata (Rifu)cmolsiB679
Lsi04G009260Cucurbita moschata (Rifu)cmolsiB751
Lsi04G009260Cucurbita pepo (Zucchini)cpelsiB152
Lsi04G009260Cucurbita pepo (Zucchini)cpelsiB358
Lsi04G009260Wild cucumber (PI 183967)cpilsiB052
Lsi04G009260Wild cucumber (PI 183967)cpilsiB195
Lsi04G009260Wild cucumber (PI 183967)cpilsiB459
Lsi04G009260Cucumber (Chinese Long) v2culsiB196
Lsi04G009260Cucumber (Chinese Long) v2culsiB452
Lsi04G009260Melon (DHL92) v3.5.1lsimeB300
Lsi04G009260Melon (DHL92) v3.5.1lsimeB308
Lsi04G009260Watermelon (Charleston Gray)lsiwcgB256
Lsi04G009260Watermelon (97103) v1lsiwmB287
Lsi04G009260Watermelon (97103) v1lsiwmB301
Lsi04G009260Watermelon (97103) v1lsiwmB338
Lsi04G009260Cucumber (Gy14) v2cgyblsiB331
Lsi04G009260Cucumber (Gy14) v2cgyblsiB418
Lsi04G009260Melon (DHL92) v3.6.1lsimedB313
Lsi04G009260Silver-seed gourdcarlsiB239
Lsi04G009260Silver-seed gourdcarlsiB405
Lsi04G009260Silver-seed gourdcarlsiB608
Lsi04G009260Silver-seed gourdcarlsiB916
Lsi04G009260Cucumber (Chinese Long) v3cuclsiB214
Lsi04G009260Cucumber (Chinese Long) v3cuclsiB481
Lsi04G009260Watermelon (97103) v2lsiwmbB262
Lsi04G009260Watermelon (97103) v2lsiwmbB274