Csa5G168830 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAATAAGAGAAGAGAAAAGGCATATTTTCATTTTGTGTGTGTTTCTCTTTCTATTCCCCCAACCATTGGCATTGGCTTGGCATCAAAACTAATATTTGTAGCTAAAGTACTTAACTTGTGTGTGTTTGATTTGCATGGCCTGCAGTTCGAAGATTATCGTTGCTGCTGCTGCTGCTAGTCCACGACTCTCATTATTACTTCCTCACACTTATCTCTTTCCCTTCCCTAATTTTGGCTTCCGGTACGTTTTTCTTTAATCCTCTTTGGTATTTCATGTGATGTTTTTGTTTAGGGTTGATTCTCTTCTTTTACCTTTTGAGTCATACTATAGAGATTTGATTTTATGATGTTTCTGCCTTCAAACTTCGCTCCAAAACTTTTACTGTTTGTCGAGGTGAAAAAGTACTAGAGAGAGATCTTTGTTGATGATTTTTATGCGTGAATCGAAGTCAGTTAACATATTAACACCGATGCATTTGATGTTGTGTTGATTGAATTGTTCACGCACGCTACGTTGACGAAACTTTGTTTATGTTGACACAATAGTGACTGTGTAAGCCCGTTGATGATTTCTACTCACATAAGATACCTAAAACAAAAAGAACTTTTTGTTCGTGTGTGGACAAAAGTATCATTTCCACATATGCACGATATATTGATACAAAAAAGATGTTTATAGAAGTCCATTAATCCTCTCTCAAGAGCTATGTTAAGTCTTGGTTGTGCCTTGTTTAATTTATTCAAATATTGAGATTTTGTTGTTTTTTAAATGTTTATTGAAAATTAAAACGTACATGTGGAAGTATATATATCACGAAATTTTTTTTTTTTTTAAAAAAGACATAATCTAATAAGTAACCACGATAATTAGAACTAGATCATAAATATATAACCGAAAAACAACTATCAATCCAATAATTAGTATTAAAATCTTTCATCTAAAATTAAAATTAAGACACTATCATATACTCAATCTTTTTCTATCGTCCTATTAACACAAACAATGAATTTTTCACACTAGAAACGTAAGAACACAAAAAAAATTTTAAAAAATAGAGTGAGATTCACTAATGTTAATATGACATCCATTACTACTCACGAAAATAAATCTATAGTATGATATGGTATGATATGATATGATATGATATCCCGATGCAACCAACCCGAGTTTATTAGTTGTTGGTTTTTTAGGTCAAGTCATTGGTCAGCGTACGAGAAGAACCAAGAGGACCAAATATGGCCTACAATGGTACCCAATCACCTGATCTCTCGTGATCTATCCGAAGATTATTGGGTTCCCCATCCTGAAACCGGAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACTGTTCCCAACGACACGTCGGCTGGTGGTAACGAGGGTTCCGTTCTAAACCTCAAGGCTTGGTTCCGACATAACGGCCTCGAAGACCTCGAGAAACCACACACTCTCTAATTTGGACCCTTGAGATCATATGATAAGAAGATAATAAATAGTATTTTGTCACACATTAATA ATGGCCTGCAGTTCGAAGATTATCGTTGCTGCTGCTGCTGCTAGTCCACGACTCTCATTATTACTTCCTCACACTTATCTCTTTCCCTTCCCTAATTTTGGCTTCCGGTCAAGTCATTGGTCAGCGTACGAGAAGAACCAAGAGGACCAAATATGGCCTACAATGGTACCCAATCACCTGATCTCTCGTGATCTATCCGAAGATTATTGGGTTCCCCATCCTGAAACCGGAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACTGTTCCCAACGACACGTCGGCTGGTGGTAACGAGGGTTCCGTTCTAAACCTCAAGGCTTGGTTCCGACATAACGGCCTCGAAGACCTCGAGAAACCACACACTCTCTAA ATGGCCTGCAGTTCGAAGATTATCGTTGCTGCTGCTGCTGCTAGTCCACGACTCTCATTATTACTTCCTCACACTTATCTCTTTCCCTTCCCTAATTTTGGCTTCCGGTCAAGTCATTGGTCAGCGTACGAGAAGAACCAAGAGGACCAAATATGGCCTACAATGGTACCCAATCACCTGATCTCTCGTGATCTATCCGAAGATTATTGGGTTCCCCATCCTGAAACCGGAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACTGTTCCCAACGACACGTCGGCTGGTGGTAACGAGGGTTCCGTTCTAAACCTCAAGGCTTGGTTCCGACATAACGGCCTCGAAGACCTCGAGAAACCACACACTCTCTAA MACSSKIIVAAAAASPRLSLLLPHTYLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEGSVLNLKAWFRHNGLEDLEKPHTL*
BLAST of Csa5G168830 vs. TrEMBL
Match: A0A0A0KRJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168830 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 1.9e-69 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
BLAST of Csa5G168830 vs. TrEMBL
Match: F4KFM8_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At5g17165 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.4e-16 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 1
BLAST of Csa5G168830 vs. TrEMBL
Match: D7LWX7_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909708 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 1
BLAST of Csa5G168830 vs. TrEMBL
Match: A9P9U6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.7e-15 Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 1
BLAST of Csa5G168830 vs. TrEMBL
Match: U5FUI0_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0013s07960g PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.5e-15 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 1
BLAST of Csa5G168830 vs. TAIR10
Match: AT5G17165.1 (AT5G17165.1 unknown protein) HSP 1 Score: 92.0 bits (227), Expect = 2.7e-19 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1
BLAST of Csa5G168830 vs. TAIR10
Match: AT3G03150.1 (AT3G03150.1 unknown protein) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14 Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
BLAST of Csa5G168830 vs. NCBI nr
Match: gi|449451834|ref|XP_004143665.1| (PREDICTED: uncharacterized protein LOC101218227 [Cucumis sativus]) HSP 1 Score: 269.6 bits (688), Expect = 2.7e-69 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
BLAST of Csa5G168830 vs. NCBI nr
Match: gi|659073212|ref|XP_008467312.1| (PREDICTED: uncharacterized protein LOC103504694 isoform X2 [Cucumis melo]) HSP 1 Score: 214.2 bits (544), Expect = 1.4e-52 Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 1
BLAST of Csa5G168830 vs. NCBI nr
Match: gi|659073210|ref|XP_008467311.1| (PREDICTED: uncharacterized protein LOC103504694 isoform X1 [Cucumis melo]) HSP 1 Score: 214.2 bits (544), Expect = 1.4e-52 Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 1
BLAST of Csa5G168830 vs. NCBI nr
Match: gi|145334503|ref|NP_001078597.1| (uncharacterized protein [Arabidopsis thaliana]) HSP 1 Score: 92.0 bits (227), Expect = 7.7e-16 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 1
BLAST of Csa5G168830 vs. NCBI nr
Match: gi|1009123785|ref|XP_015878723.1| (PREDICTED: uncharacterized protein LOC107414996 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 92.0 bits (227), Expect = 7.7e-16 Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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