Cucsa.093870 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAGCAGTATGTGGTGGGACTGTTCTTATCATTTATGTTAGTTGTTATTGCAAGCCAGTCATATAATCGATTACTTTTTATCGATAGCGTATCTGATTCTCAAGCATGCTTTTGGGTTCTTCTTTCTATTCTTCTTTAAGTTGACCTTTTACCTACATCATATCTAATGATCAAATCATCCATACACTCAATTTGAACAAGAGTAATTAATTATTGTAATATATATATATATATATATATATATATATATATatGTGTaTCTATtATTTATTaCttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaGTTAATTAaTtATTaTaATATATATATATATATATATATATATATATATATTCGtGGATTCCATATTTTAtACTTCGTTCGTAGGAATTTTTAAATTtAATTTTtATTtCATCCATGAATTTCAAGATCTTATATACTTCACCATTAAATTAGATCGATATGATGTTAGATTTTCCTTATTTACAATTTTCCGATAGTGTTCTTAAATCTGAATTGTTCTCTTGCAATCGACCACTCTTTCTTCAATTTATATACTAAGTAAATCTTTGTGTTGATTCTTCACTGTTTATGTTTTTCAATTGATCTTTCTATGCTTAATGACTTTACACTTTTAATGTTGAAATAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCTGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG ATGAAAAAGCAGTATGTGGTGGGACTGTTCTTATCATTTATGTTAGTTGTTATTGCAAGCCAGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCTGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG ATGAAAAAGCAGTATGTGGTGGGACTGTTCTTATCATTTATGTTAGTTGTTATTGCAAGCCAGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCTGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG MKKQYVVGLFLSFMLVVIASQRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL*
BLAST of Cucsa.093870 vs. TrEMBL
Match: A0A0A0KUG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025720 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 9.1e-47 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Cucsa.093870 vs. TrEMBL
Match: F6HEH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02550 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.9e-26 Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 1
BLAST of Cucsa.093870 vs. TrEMBL
Match: M5X2T6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013385mg PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-24 Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 1
BLAST of Cucsa.093870 vs. TrEMBL
Match: U5FUI0_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0013s07960g PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-24 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 1
BLAST of Cucsa.093870 vs. TrEMBL
Match: A9P9U6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 7.0e-23 Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cucsa.093870 vs. TAIR10
Match: AT5G17165.1 (AT5G17165.1 unknown protein) HSP 1 Score: 101.3 bits (251), Expect = 4.1e-22 Identity = 50/92 (54.35%), Postives = 63/92 (68.48%), Query Frame = 1
BLAST of Cucsa.093870 vs. TAIR10
Match: AT3G03150.1 (AT3G03150.1 unknown protein) HSP 1 Score: 99.8 bits (247), Expect = 1.2e-21 Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 1
BLAST of Cucsa.093870 vs. NCBI nr
Match: gi|449458301|ref|XP_004146886.1| (PREDICTED: uncharacterized protein LOC101221715 [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 1.0e-46 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.093870 vs. NCBI nr
Match: gi|700198035|gb|KGN53193.1| (hypothetical protein Csa_4G025720 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Cucsa.093870 vs. NCBI nr
Match: gi|659107731|ref|XP_008453829.1| (PREDICTED: uncharacterized protein LOC103494437 isoform X1 [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-40 Identity = 86/93 (92.47%), Postives = 87/93 (93.55%), Query Frame = 1
BLAST of Cucsa.093870 vs. NCBI nr
Match: gi|659107733|ref|XP_008453830.1| (PREDICTED: uncharacterized protein LOC103494437 isoform X2 [Cucumis melo]) HSP 1 Score: 172.9 bits (437), Expect = 3.1e-40 Identity = 86/92 (93.48%), Postives = 86/92 (93.48%), Query Frame = 1
BLAST of Cucsa.093870 vs. NCBI nr
Match: gi|225454856|ref|XP_002274959.1| (PREDICTED: uncharacterized protein LOC100247770 isoform X1 [Vitis vinifera]) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25 Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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