CmaCh02G009970 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAACTTGACAGCCCTTCCTTCACCACTCACTCCACGCGCACGTCCTTCAGCTTCGTATTCTTCTTCTTCTTCTTCTTCTTCTTCAATTGCATGGCCGCCGCTTCTAACCTTATAATTGCTGCTCGACCACGACTCGCCCATTTGCGGAACCCTGTCCGCCGCCTCTCGCCCTCTCTCTTCACTCTCCGGTACTCTTGCCTCTTATTTCTCTTCCTTAAATTAATATAAATATCTTTTAATTTTATATTTACTTAAACATCTCCCACTAAATTAATAATGTCAGACTCATACCCAATAATCCTTAACAATTTTAATTTTTTTTAAAAAAATTTAAAAATAATTTTGTGTTACCGTATTTCAAAAATATTAACGTTAGAATGTTTGTAAATAATTTGTAAAGTGTTTCAGGACTGTTCTTGTCTATATCTTAAGAGTAAAAATTTTTAATTTTTTTTTAAAATAAAAGTAAAGGGTGTCGATGTTGATTTTTAAATGTTATGGGTATTTTTTAAACTTAATGGTTAAATTTAATTTTATATTTAGAAGGTTTGTGAATTAAAAAAATGAATTTATGTTGAGAGCTATTAGACAGAAATTTAACTATTTATTTAACCTACTTAGCTAATTTAAAGACCAAAATATTTAATAATTTAATGTCCAAAGGAAACAAAAAAAAAAAATTATATTTATCTTATATGCTATCACACGTGTCATCAAGCTTAAGCTTAAATTTGAATAAATATGAAGATTAATTAAAAATTATAAGAATAAATTTATAATTTAATTTAATTTATTTTAAAGAAAAGGCATGGAAGCACCTACCTTTAACATTTGAGAGACCATGCCTGGACAACGTCTTAATTTCCACAATTTTAAGAATATTTTATTCTCTTCGATCGACGTAAGATCTCACTGTTCATACCATCAACATATTAATAATATATAATTTATTTATTATTATTATTATTTATTTTTTTGCTTTCAGGGCAGGTCATTGGTCAGCGTATGAGAAGAACCCAGAAGAGGAAGTGTGCCCGACGGTGGTGCCAGATCATATGATCCACTCCATATCCGAAGACTACTGGGCGCCACATCCCCAAACCGGAGTTTTCGGCCCACCAATAAGTCAACACAATCCTGTTCCTAGCGACACGTCGGCTGGCGGCGCCAAAGAGGGCTCCGTTCTGGAGCTGAAGGTTTGGTTCCGACACATCGAGCTGGAGGACCCCGAGAAGCCACACGACCTGTAATCTCCATGGCTATGATAAGATATAATAATAATAAGCTTACATGCATGCAAGGGTGTAAGAAGAAGTTTATGTGTATTATTTGGATTGAGTGCCGTGTTTCTATTTTCAAGTTGTGTTATGAACGTGTGCGCTACACGAACTTTGTACTCGTTTCATGATTATATCTCTTGTTGTAAATTTAAGCTATGTGATTAGAAAGGGAGTAATTACTCGGATGAGATTGATGGTCGATGCCATTCTCAGTTGGAGGGAGGAACAAAACATTTATTAAGGTGTGGAAACTTATTTCTAGACTTGTAATATTGTCTAATGTTGTTTGGGCGGTAGAGTTTTTAGATTTTTTAATAATGTCGAGTTTAATCATCTTCTTATTTTGAATAGAATGTGTTGATCTAAATCTTCTTCCGGA TTTTAAACTTGACAGCCCTTCCTTCACCACTCACTCCACGCGCACGTCCTTCAGCTTCGTATTCTTCTTCTTCTTCTTCTTCTTCTTCAATTGCATGGCCGCCGCTTCTAACCTTATAATTGCTGCTCGACCACGACTCGCCCATTTGCGGAACCCTGTCCGCCGCCTCTCGCCCTCTCTCTTCACTCTCCGGGCAGGTCATTGGTCAGCGTATGAGAAGAACCCAGAAGAGGAAGTGTGCCCGACGGTGGTGCCAGATCATATGATCCACTCCATATCCGAAGACTACTGGGCGCCACATCCCCAAACCGGAGTTTTCGGCCCACCAATAAGTCAACACAATCCTGTTCCTAGCGACACGTCGGCTGGCGGCGCCAAAGAGGGCTCCGTTCTGGAGCTGAAGGTTTGGTTCCGACACATCGAGCTGGAGGACCCCGAGAAGCCACACGACCTGTAATCTCCATGGCTATGATAAGATATAATAATAATAAGCTTACATGCATGCAAGGGTGTAAGAAGAAGTTTATGTGTATTATTTGGATTGAGTGCCGTGTTTCTATTTTCAAGTTGTGTTATGAACGTGTGCGCTACACGAACTTTGTACTCGTTTCATGATTATATCTCTTGTTGTAAATTTAAGCTATGTGATTAGAAAGGGAGTAATTACTCGGATGAGATTGATGGTCGATGCCATTCTCAGTTGGAGGGAGGAACAAAACATTTATTAAGGTGTGGAAACTTATTTCTAGACTTGTAATATTGTCTAATGTTGTTTGGGCGGTAGAGTTTTTAGATTTTTTAATAATGTCGAGTTTAATCATCTTCTTATTTTGAATAGAATGTGTTGATCTAAATCTTCTTCCGGA ATGGCCGCCGCTTCTAACCTTATAATTGCTGCTCGACCACGACTCGCCCATTTGCGGAACCCTGTCCGCCGCCTCTCGCCCTCTCTCTTCACTCTCCGGGCAGGTCATTGGTCAGCGTATGAGAAGAACCCAGAAGAGGAAGTGTGCCCGACGGTGGTGCCAGATCATATGATCCACTCCATATCCGAAGACTACTGGGCGCCACATCCCCAAACCGGAGTTTTCGGCCCACCAATAAGTCAACACAATCCTGTTCCTAGCGACACGTCGGCTGGCGGCGCCAAAGAGGGCTCCGTTCTGGAGCTGAAGGTTTGGTTCCGACACATCGAGCTGGAGGACCCCGAGAAGCCACACGACCTGTAA MAAASNLIIAARPRLAHLRNPVRRLSPSLFTLRAGHWSAYEKNPEEEVCPTVVPDHMIHSISEDYWAPHPQTGVFGPPISQHNPVPSDTSAGGAKEGSVLELKVWFRHIELEDPEKPHDL
BLAST of CmaCh02G009970 vs. TrEMBL
Match: A0A0A0KRJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168830 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 9.0e-29 Identity = 71/126 (56.35%), Postives = 86/126 (68.25%), Query Frame = 1
BLAST of CmaCh02G009970 vs. TrEMBL
Match: F4KFM8_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At5g17165 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.6e-17 Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 1
BLAST of CmaCh02G009970 vs. TrEMBL
Match: A0A078BX60_BRANA (BnaA10g17500D protein OS=Brassica napus GN=BnaA10g17500D PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-17 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of CmaCh02G009970 vs. TrEMBL
Match: A9P9U6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-17 Identity = 51/104 (49.04%), Postives = 65/104 (62.50%), Query Frame = 1
BLAST of CmaCh02G009970 vs. TrEMBL
Match: A0A059DKJ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02956 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-17 Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of CmaCh02G009970 vs. TAIR10
Match: AT5G17165.1 (AT5G17165.1 unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 8.1e-21 Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 1
BLAST of CmaCh02G009970 vs. TAIR10
Match: AT3G03150.1 (AT3G03150.1 unknown protein) HSP 1 Score: 94.7 bits (234), Expect = 4.0e-20 Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 1
BLAST of CmaCh02G009970 vs. NCBI nr
Match: gi|449451834|ref|XP_004143665.1| (PREDICTED: uncharacterized protein LOC101218227 [Cucumis sativus]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28 Identity = 71/126 (56.35%), Postives = 86/126 (68.25%), Query Frame = 1
BLAST of CmaCh02G009970 vs. NCBI nr
Match: gi|659073212|ref|XP_008467312.1| (PREDICTED: uncharacterized protein LOC103504694 isoform X2 [Cucumis melo]) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26 Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 1
BLAST of CmaCh02G009970 vs. NCBI nr
Match: gi|659073210|ref|XP_008467311.1| (PREDICTED: uncharacterized protein LOC103504694 isoform X1 [Cucumis melo]) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26 Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 1
BLAST of CmaCh02G009970 vs. NCBI nr
Match: gi|1009123783|ref|XP_015878722.1| (PREDICTED: uncharacterized protein LOC107414996 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 102.1 bits (253), Expect = 7.1e-19 Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1
BLAST of CmaCh02G009970 vs. NCBI nr
Match: gi|1009123785|ref|XP_015878723.1| (PREDICTED: uncharacterized protein LOC107414996 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 101.3 bits (251), Expect = 1.2e-18 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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