Csa4G088730 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCTGTCAGTTCCAAAACCATGTTCATCGATCTCTCCATATTTCTTTTGCTCTCTGTTTCTCACAATTATTCCTTTTCTTGCATTCTACTTAACCTTCTATTTCTACTCCCTCGCACACACCACCATTGCCGGACGCTACCTGTTAATTCTCCTCTGGTAACCTCTCTCTTCCTTTTCAACATACGGTGTAATGGTGATGATGGGGGAGCTTTATTCATTTAATTGTTGTTTTTTTTTTTTTGTATTTATTTTATTGTTTTTTTATGGTCTCGATCAATCAGTTCATGGTTATTGGTTTTCTTCATTTGGTGATTTTGTGGGAGAAGGGAGGATTGGCTGCATTATTTATACTTCAGCAAACCACATTATCTATTTATTGTAATATCTGCCAGGGTATGGATATGTGACTTTGGTAAATTTTCTGTACTTCCAATTTTCCATTTTGATTAGCATTCATATTGGTTTATCTCTGTGCACCGTACTTCCAAATTTTAGATTGTGAAATATCTTTGAAGTATGAATGCAATGGAGGAAGAGAAAATCATTAGGTCTAATGGCAATGATGGGAGATATATTTGTTATGGATTTGATTTATTCTTAGGTTTTTGTGACAATTCTCATGATTTGTTTGATTTCTTCGGTTCATTGTTTTTCCTGGCATGTACTGTTTACACTCCAGGAGAGCATGTAATCTATTTTACAATGTCTGTGAAGACTGAATGTAGGAATATGAAACTCTAATCTGTGCAATTTTCATTTTCCATTTTGATTAGCATTCTGGTTGAGTACGGATGAGTCTAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACGTGTTACAAGCAATGGAGAACAGGTAAGCTTTCTCTTTCATTTGTTATCTTTTGAAGATATAATGAAGGCTACAGAAATAGTCTTCCCATTATTCTTTCTTGTGGTGGGTGGTCCTCCCACCACAAGGGTTGGGAAGGAATCGAGGTTAGGATGTTGTTGAAAGGATATCCATGGCAGATAACGAAACAAAATGGAAAGCTGGTAGAGTAGTATGGAAATGTTCCTCCTATGTAGTTGGAAGGAATTGAGGTTAGGATGCTAGTGAAAGGATTTCCATGGCAGGTCAGGAAAAAAAGAAAGCTGGGAAGTAGAATAGAAATGCGAAGGAGCACACTGAGAGCCAATTCTGATCTATCAACCATGCAACAACACCCCCTCCCCCCAATTCTCCCCTCCAACTAACAACACTATAACATGTTTTTATCAAAGTTCCAGTTATTGTAATTTTCTCTGTCCCTGTTTTCTTGGTTCAGGTACACGTAAAGACGGGAAAATCCAATGGTTTCCCTCATGGAAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGTACATTTACGGTATATTGAATGTCCTTAATAGCTTGTTACTTATCAATTTTGCTTTTTTTTCATTGAGCTGTTCCCCGTGGCTTTATGAAAATTACCAGCTCTCCTGGATCTAATTTATTGGTTAACTTTTGCCCTTGTTATAATTTATAAACTCTGGAGTTGCGTCTTCAGAGACCAAATTCCTATTAGTGTCCTATCTTTTGGCATATTCAATTGCATTATTTTGAAAATTATTCCCACTTCTCAGTTCATGGTTTTCAATTCACCAAATAAATTAAGAAAGAGCATGCAAAATGATAGAAGCAACAACACCAAACTCATAAGTCATAATCTTCTTGTTTCTTGTGAGCTAACAAAGAGTCTTGAACTACTTTGATTCTGATACATGATAATTTTTTATTGAGGCCTTCCTTCCCTCAACTTTAGATATTATAGTTTGTGATGCTGAAACAACATCTTACGTTCGAGGCATATTTAGAGTTAAAGTTTTTTTTTCCAAATTTGCATCATTCTAGTTGGTTGATATAGACTTGAACAGTGATTCATATTTTCAGATGAATTCTTCAGGCATTATCATATCATTTTGGGCCTTCGTTACCCACAATACTTGTGATTGCCTAACACATAATTTTGTACAATGTTGATGGGGCAGACTTTTATGCTAACCAATGAGGACACATTGTCTATGATTTATTTCAGATACAATCATACACACATGTAGCCCAATGGTAATAACAAATTTGTAAATTGTTTTCCATGAGATGGTTTAATCATTTGTTGTGCAGGCTAGAAAGGACATACATAATTCGAAAGTACCAGAGAGATGCCAGGATCTAGTTCAAGGTGAAACGGCTACAAAACAAGTGTCAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGGCTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGTAAGTACCATTGACTTTCCTCCTTGAACTATTGAACGTTATGATGTTCAACCATCACATTAAAAAATCTGTTCAATAATCTTTGTCAAAATTTGAAGTCTAATTATTTTCTTAAAAGAACACGATTCTTCTGAATAAAGTTATCATTCTCCAGAGGGAAATTTTTTATTTTTCTTTCAAGCACTTTATTTATAGCTAAAGGGTATCTTTTAAGTTTTATCTTCAACATAATTGCCTTTTACAAGAGGGATAACATTGCCTGTTATTTGATGTTCAACCATCACAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGGTATGCTTCATGACTTCATCAATCCCGTACGGACCTAAATTGAATAGTGCTCTTTTAATTGTAGCAAATTGAAATCTAACGTTTATAAATATAATTGAAAAGTGAAGGAAAGCATTAGTTTTACTTAATAAACTGGTTCTTAACATTTGTTCTTTACAATGTCTTCTTTTAACTTTTTTTTCTCCCGTTGAAAGTTGTTTACTACCGTTAAAAATATTGTTTATATTAGTTGTACCAACCTGGACATATATCAACCATTTAAAACGTATACTTTCAACTAAGAGGCCAACTGTTTGAATCTTCTAATGAAATATACTTCAATTGCTTAGAACATATGCTTTTCAAAAGTTTGAATTTTCCAAATAGATTTTGATAAAAAAAAAAGAATATGACTTTAAGCTAATAAAGGGTTTTGAATCATAAACCATTTAAACTCTAATCCTTCCTTGCTAAATTATTCAATGACTTTGAATGGTAAAAATTAATCCGTGATAGTTTGACTTTGGCAAGAGTTTTGTTTCATTAAACTTTATTTCGGTTGAAAAACTTACAGTTATTTTCCGCTGGTCCTAATATCTTCCATTTTTTTTGTTAGTGTTTCTGTTTTTCATAGTACTTGGAATTTGTTTTGGGGCTTATCATTTGAAGATTTTACATTGTATTTTAAAAAGTTCATAAACCACATGTTTTGAAATTAATGCTAGAGACTCGAGAAATGACCTAAAACATAAGTCTACATGGCATTAAACAAAACTTTTGTAAAAATATTTAGAATATTGAATGATAGGAGGGATCAAAATGAACTTCTAATGTTTTGAGTGTACTAAACAAAGCACTGGTCAAGATAAAATAAGGAGGAAAGTTGAGAGACAAATAAATTAAAACATTTATTAGTAGTTGACTTAGTCACCTTTCCTCAAAAAAAAAAAAAAAAGCCACCTATTGACTTTAGTTTAATAAAATTTATCTCACAGTAAATGTTAGTTTATTGATGGGATTTCTTAACTGACTAAAGTTGCTTAAATTATTGCGTGCTCAAACTATTGCGTGCTCAAACTATTGTATCATTAAAAGAATTGACTGTATTAGATCACCACTCACTTTATCATCCATTACTTGTTCTAATCATTCAACGATCACTAGAGAACTCTAAAAAGATATTTATATTTTTGTAGGTTTTAATATTATATAAAACTGACGTTTAAAAAGCGAAGTGTTGATGAACTCATTTATTTAAGCTGATTTTCTGATATAAATGTGAGAATTCTTTGCTCCTTTTCTATTGACATGGATGGTTACTTGTGGCCGTCTCTAATTCTTTGAAAACCATTTGGCTTTTAACCTTTTTTTTTAATTATGCAAATTAAGCACAATAATGAGTGAACACATCGAAAATTTATCAATTATGAAAACAAACTTGACATATAAATCAACGAAACTCCAAAGCAGTTGGTAAACAAGAGACATATCTTACACATGTGGCAAATAAGAGTTCATTATCAGCTTGAAATCAGTTCCTGTGTTTTTCTGCAAACAAAGTCTTTCAAATGAGTATTGTTAATTTTCTGCTATATTATTTAATGGTGAACCCATATGCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCGTATAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCCGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGGTGCAAATGAAACAAACAAGCAAAGTCAATAAAGTGACGTATCAATCGGGGTTGAAGGTCTCAAACTTAGCTGGACATTCTTCCTTGAACAACAAGGCGAGTTCAAAGGCCAAAAATTCTGCTATATCCAACTGCTGAAACAAGCTACAAGAAGCTGAAGGTTATTTCTGTATATAATCAACCAAACTCATAAACCAACTGACAAATTCAATGATATGAATTTGGTAGTTCTCTCTATAATTTCACCCGGCTTGCTTTGTAGTGTAAATTTCTATTATTATGC ATGAGTCTAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACGTGTTACAAGCAATGGAGAACAGGTACACGTAAAGACGGGAAAATCCAATGGTTTCCCTCATGGAAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGTACATTTACGGCTAGAAAGGACATACATAATTCGAAAGTACCAGAGAGATGCCAGGATCTAGTTCAAGGTGAAACGGCTACAAAACAAGTGTCAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGGCTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCGTATAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCCGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGGTGCAAATGAAACAAACAAGCAAAGTCAATAAAGTGACGTATCAATCGGGGTTGAAGGTCTCAAACTTAGCTGGACATTCTTCCTTGAACAACAAGGCGAGTTCAAAGGCCAAAAATTCTGCTATATCCAACTGCTGA ATGAGTCTAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACGTGTTACAAGCAATGGAGAACAGGTACACGTAAAGACGGGAAAATCCAATGGTTTCCCTCATGGAAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGTACATTTACGGCTAGAAAGGACATACATAATTCGAAAGTACCAGAGAGATGCCAGGATCTAGTTCAAGGTGAAACGGCTACAAAACAAGTGTCAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGGCTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCGTATAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCCGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGGTGCAAATGAAACAAACAAGCAAAGTCAATAAAGTGACGTATCAATCGGGGTTGAAGGTCTCAAACTTAGCTGGACATTCTTCCTTGAACAACAAGGCGAGTTCAAAGGCCAAAAATTCTGCTATATCCAACTGCTGA MSLANCFWTIFKQRKVKRVTSNGEQVHVKTGKSNGFPHGKSEDLAATRIQNAFRTFTARKDIHNSKVPERCQDLVQGETATKQVSSFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWSGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQMKQTSKVNKVTYQSGLKVSNLAGHSSLNNKASSKAKNSAISNC*
BLAST of Csa4G088730 vs. Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.3e-21 Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 1
BLAST of Csa4G088730 vs. Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.9e-10 Identity = 54/163 (33.13%), Postives = 82/163 (50.31%), Query Frame = 1
BLAST of Csa4G088730 vs. TrEMBL
Match: A0A0A0KVH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G088730 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 9.5e-148 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1
BLAST of Csa4G088730 vs. TrEMBL
Match: A0A061F933_THECC (IQ-domain 10 OS=Theobroma cacao GN=TCM_031705 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 3.2e-63 Identity = 139/284 (48.94%), Postives = 168/284 (59.15%), Query Frame = 1
BLAST of Csa4G088730 vs. TrEMBL
Match: A0A151S9C1_CAJCA (Protein IQ-DOMAIN 1 OS=Cajanus cajan GN=KK1_026825 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.2e-63 Identity = 126/222 (56.76%), Postives = 164/222 (73.87%), Query Frame = 1
BLAST of Csa4G088730 vs. TrEMBL
Match: E0CSC0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01690 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.2e-63 Identity = 141/279 (50.54%), Postives = 168/279 (60.22%), Query Frame = 1
BLAST of Csa4G088730 vs. TrEMBL
Match: A5AR05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013534 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 5.5e-63 Identity = 141/279 (50.54%), Postives = 168/279 (60.22%), Query Frame = 1
BLAST of Csa4G088730 vs. TAIR10
Match: AT3G15050.1 (AT3G15050.1 IQ-domain 10) HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57 Identity = 121/230 (52.61%), Postives = 147/230 (63.91%), Query Frame = 1
BLAST of Csa4G088730 vs. TAIR10
Match: AT2G33990.1 (AT2G33990.1 IQ-domain 9) HSP 1 Score: 207.6 bits (527), Expect = 9.3e-54 Identity = 109/241 (45.23%), Postives = 147/241 (61.00%), Query Frame = 1
BLAST of Csa4G088730 vs. TAIR10
Match: AT3G22190.1 (AT3G22190.1 IQ-domain 5) HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32 Identity = 88/239 (36.82%), Postives = 124/239 (51.88%), Query Frame = 1
BLAST of Csa4G088730 vs. TAIR10
Match: AT2G26180.1 (AT2G26180.1 IQ-domain 6) HSP 1 Score: 124.8 bits (312), Expect = 7.9e-29 Identity = 81/206 (39.32%), Postives = 110/206 (53.40%), Query Frame = 1
BLAST of Csa4G088730 vs. TAIR10
Match: AT2G26410.1 (AT2G26410.1 IQ-domain 4) HSP 1 Score: 110.2 bits (274), Expect = 2.0e-24 Identity = 71/226 (31.42%), Postives = 120/226 (53.10%), Query Frame = 1
BLAST of Csa4G088730 vs. NCBI nr
Match: gi|778691615|ref|XP_011653310.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus]) HSP 1 Score: 530.8 bits (1366), Expect = 1.4e-147 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1
BLAST of Csa4G088730 vs. NCBI nr
Match: gi|659101620|ref|XP_008451703.1| (PREDICTED: protein IQ-DOMAIN 1-like [Cucumis melo]) HSP 1 Score: 521.9 bits (1343), Expect = 6.3e-145 Identity = 256/261 (98.08%), Postives = 258/261 (98.85%), Query Frame = 1
BLAST of Csa4G088730 vs. NCBI nr
Match: gi|743770590|ref|XP_010915584.1| (PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Elaeis guineensis]) HSP 1 Score: 250.8 bits (639), Expect = 2.7e-63 Identity = 141/282 (50.00%), Postives = 175/282 (62.06%), Query Frame = 1
BLAST of Csa4G088730 vs. NCBI nr
Match: gi|590609852|ref|XP_007021652.1| (IQ-domain 10 [Theobroma cacao]) HSP 1 Score: 250.0 bits (637), Expect = 4.6e-63 Identity = 139/284 (48.94%), Postives = 168/284 (59.15%), Query Frame = 1
BLAST of Csa4G088730 vs. NCBI nr
Match: gi|225461608|ref|XP_002282973.1| (PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]) HSP 1 Score: 249.6 bits (636), Expect = 6.0e-63 Identity = 141/279 (50.54%), Postives = 168/279 (60.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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