CmaCh16G004150 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCATTCTGGTTGGATACGAATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAACCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTAAGCTTTCTGTATCATTTGTTCTCTCTTGAAGATATGAATTAAGGCTATAGTAACAGTTTTTTCATCGTTCTCTATTTCTTCATGCATGTTTGTATATTGCAAAGGTTTATATATATTTTTTTGTTGGGAACTTAGCAGGAACCTCAATATTCGGGCATAAAAAAGGGAATTGATTAGGTTGGTTGTGAAGATTACTCAGTTCAATAATTTTTTGGCTTTTAGTCTTGTATTTTGTGCGTCGTCTCTGGTTACTAACTTCTGCTGAAGTACAGAACCAGGAGAAACTTATTACAACTTAAATTTGACGTTTGATTTCTCTACCTAATATTTGGAGGTATAAGCTTCCTAATTTATTGATTATTGCTTGGAGTTTTACCTTGTTCATCATATCACTGAAATATTTGTTTCTCATAAAAAAAAATCACATCAGTTATTGTGGTAGTTTGTTAAAGCTTTATCTGTCTCTTGCTTTCCTTTTGAATGAACCTCTCATGAGAACAAATTGAGATTGAAAAATTATTATTCTAAACAAAAACTTAGTGAAATATGATGTCTCTGTTATTATCGAATTCTTAACTCGCTTCTCCATTTTCCCACTTATGCTCCTCTTCAAATAACTACATTTGCACTTGTTCTTATCAAAATTTCAGTTATTGCAAGTTGCTCTGTCTTGTTCATGGGTCAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGAAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGTATATTGAATGTGCTTAATAATTTGTTACCTATCTATTTTGCTTTCTTCTCACACTGATGATCGATTGAGCTTCCCGTAGCTTTACCATGTTGCTTTATTTCCAGCTCCCTTGGATCCAATTTGTTGGCTAACTTATGCCCCTACAATAAATTATAAACGCTGGAGTTGCTTCTTTAGAGATCAGAATCAGTGATTCGCATCCTGTCTTTTGGTTATTTTTCAATAGCGTTGTTTTAAAAGTTATTCCCATTTCCCAGTTCATGGTTTTTGATTAACCGATGGAATAAGGAAGAGCAATCCAAACAATATCAGCAACAAGAACGAAGTCATAATCTTCTTGTTTCTCGTGAACTAACTAACAAAGAATCTCGAATTCAACTACTTTGTTCTGATTCATAATAACTTTTTATTGAGGCTTGCCTTCACTCAACTTAGATATTATTGTTTGTGATGCTGAAACGTCTTTACATTCCAGGCATATTTAGAGTTCAGTTTTTTCCAGATTCATATCTAAAGATGAGTTCTTCAGGCATTATCTTGTCATTTTGTGACTTTGTTGGCCACAATACTTGTGATTGCCTAACCTATAATTTTGTATGATGCTGATGCGGTCAACGTTTATACTGACCAAAGAAGATTCCAACATTACCTATGATCTATTTGTTATACAGACATGTACCTCGATGGTAATAACAAATGAATCGATCATTTTTTATGAGATGGTTTAATCTTTTGTCTTCCAGGCCAGAAAGATTGTACATGACTCGAAAGGGCCAGAGAGGTGCCAGGATCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCGCAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAAGTGCCATTAACTGTCTTCCATGAATTTTTTAATATTCTGATTGAGTACTCATTTATAATCCACTGCTTAATAGCGATTAAAGAAAATCAGGGGATTCTCTTTAATATCTACTTCAACAATCTAGGATCCATAAAATCTTTCCAAATTAGTCGTTTTTAACCATTTTATATAATATTTTACTGTTGAGCTATTTTAAAAATATTATTTAGATTTTTTTAAATTTTCATTTGGTACTCTTTTTTATTTCATTATTTGTTTTTATTTTTTAAATAAGCTCGCATGGTCACCTTTTTTAACGTTTAATTTTTCTGTTTAAAATCTTAGTCAAAATTTGAAATCTAATTAATGACTTAAAGAACATGTTTCTTCTGAATACAGTTATCATTCTTCCACTCTCCAGGGAGAAAATTTTGGGGTTTCCTTCAAGTACTTGATTTGTAGCTGAAGAGTATCGTTTATCCTGACTCAATTGTCAATTTACTAAAGACATAACATTATCTGTTGTCTGATGCTCAACCATCACAGGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGGAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGGTATGCTTCATCAATCACACATGGGCCTGAATTGAATTATACTCCTTCAGTTATAGAAAGTTGAAACCTAACGTTTATACATATACTTGAAAATTGAAGAAAACAATAGATTTACGAATTGGTTCTTAACATTTGCTGATCATTTGTTCTTTACAATATTATTTTTTCATCAAAAATAGTTTAAGACACTTGAAAATATCGAAATACTAGTCAACCGTAGTAATTTTCCTAACTTCATCGTATCATATTTCACTTGGTCAAAACATATGTTTTCGATTCACTTGGTCAAAACATATATATATATATTTTCAATTTTGAGGTAAGACAATCTCCATCTCATATATCTCAACTAAGACATGCATTTAACAGGTAAGTTAACTTTCCAAACAAGTTAATTATTAACTTTTAAGTAATAAGTGGTTTTGAATCATAAATCATTAATGAACTTTAAACCCTATTTAATACATTATTCAATGTCTTTTCAACTTTAAACCCTATTTAATACATTATTCAATGTCTTTGAGTTGAAAAAGATTGCTTAGTGGTAATCTGACCTTAGAAAAAACATTTCTTGGATTTAAATTTTATTTTGGTCCAAAAAGTTACACACTCATTTTCCTTCTATTTTACTGGGATGATTTCCAAATTTTCATAAATACTTATAGTTTGTTTTGGGGCTCATCGTTAAATATTTTGCATTGTATTTAATAGAGCTCACAAGCCACATGTTTTGAATTTAATGCTAGACTGGAGAAATGACCTAAAACGCAAGTCTATATGGTAGGGTATTAAGCAAATTTTTTTATAAAAATATTTAAAGTATTTGATGATAAAGATCAAAATTAACCTTTTAGCTTTAGGGGTACTAAACAAAACATTAAAAAGTTTGAAGACCAAGATAAAATAAGGAAGAAAGTTGAGAAAAATAATATTCAATGAATTAAATCACAATTGACTTTAATTATCTCATATTAAATATTTGTTTATTGACAAGATTTCTTAACGGAACTTTAGTCTTAAATTATTGCGTGCTCAAATTATTATATCATTAAAGAATTGTCTTGTCTTAGATCACCACTCACTTATTTTTCTGTCTCTTTCATATAAACTGTAGCACTCATTACTATTATCTTGAATTAAATCACTAAGCTGTTTTTCCTTTTTGATTGACATGAGTATGTTTACTTTTGGCCATTTTTAATTTGTACGAAACCATTTCGCTTATATCCTTTTTTATTATGAAAATTAAACACAATGACGAGTGAAAACACATCAAACAGCCAAATGTACCTATTTATTACCTATTATGAAGTAAACTGAGCAAATAAATCAATGCTGAGAAGATCAAAATCAATTGGTAAAGAGGGTATATTTTATACCTGTTGACAAAGCCTTTAAAGGAAAATTGTGACTTTTCTGTTATGCCATTTAATGGTGAACCCCATCTGCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCTACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATCTATGCCCAAATGAAACAAGCTTCAAGAAGCTGAAGGCCTTTTCCATATATAATCAGTCAACCCACAAACCACTGCTGACAAATTCAGTGAAATGAATTTGGTAGTTCTCACTATAATTTCACTCGGCTTGCTTTGTAGTGTGAATCTCTATTATTCATCCCAATAAGAGAGAAAACTTCATATTTTCCGTGAAAAAAACATGCTTAATGTTCCATCATTTTCTTCCGTTAGGCATTTCCTTGATTAGTTTGCTTTTCTCAAGAAAAAAGATACAAGGTTCATGATCTAAGAGGTCTCATTTGCTCTTTCCTTGCTCTGTTTATTGTTCTGTATGGACTGAATTAAAGAAGCACCAATTAAAGC GCATTCTGGTTGGATACGAATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAACCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGAAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGACTCGAAAGGGCCAGAGAGGTGCCAGGATCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCGCAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGGAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCTACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATCTATGCCCAAATGAAACAAGCTTCAAGAAGCTGAAGGCCTTTTCCATATATAATCAGTCAACCCACAAACCACTGCTGACAAATTCAGTGAAATGAATTTGGTAGTTCTCACTATAATTTCACTCGGCTTGCTTTGTAGTGTGAATCTCTATTATTCATCCCAATAAGAGAGAAAACTTCATATTTTCCGTGAAAAAAACATGCTTAATGTTCCATCATTTTCTTCCGTTAGGCATTTCCTTGATTAGTTTGCTTTTCTCAAGAAAAAAGATACAAGGTTCATGATCTAAGAGGTCTCATTTGCTCTTTCCTTGCTCTGTTTATTGTTCTGTATGGACTGAATTAAAGAAGCACCAATTAAAGC ATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAACCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGAAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGACTCGAAAGGGCCAGAGAGGTGCCAGGATCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCGCAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGGAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCTACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATCTATGCCCAAATGA MSPASCFWTIFNQRKVKHVSSNGEQVHVKTGKSNGSPNGKSEDLAATRIQNAFRSFTARKIVHDSKGPERCQDLIQGETATKQVLSFIHSWSRMQQEIRTRRLCMVAEYRVKQKKQENQLKLEAKIHELEVEWCGGSETKEEILFKIQHREEAAVRRERAMAYAFSHQWRANSILDLNPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQRSKLNEITYQPGSKVSTSANHSLSNKGSSKARNSSMPK
BLAST of CmaCh16G004150 vs. Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.4e-18 Identity = 73/226 (32.30%), Postives = 109/226 (48.23%), Query Frame = 1
BLAST of CmaCh16G004150 vs. Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08 Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TrEMBL
Match: A0A0A0KVH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G088730 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 3.1e-119 Identity = 221/258 (85.66%), Postives = 236/258 (91.47%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TrEMBL
Match: A0A061F933_THECC (IQ-domain 10 OS=Theobroma cacao GN=TCM_031705 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60 Identity = 132/251 (52.59%), Postives = 156/251 (62.15%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TrEMBL
Match: D7TJI1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00860 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.3e-60 Identity = 140/266 (52.63%), Postives = 173/266 (65.04%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TrEMBL
Match: E0CSC0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01690 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.6e-60 Identity = 142/279 (50.90%), Postives = 170/279 (60.93%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TrEMBL
Match: A5AR05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013534 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.3e-59 Identity = 142/279 (50.90%), Postives = 170/279 (60.93%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TAIR10
Match: AT3G15050.1 (AT3G15050.1 IQ-domain 10) HSP 1 Score: 208.8 bits (530), Expect = 4.1e-54 Identity = 121/243 (49.79%), Postives = 150/243 (61.73%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TAIR10
Match: AT2G33990.1 (AT2G33990.1 IQ-domain 9) HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50 Identity = 99/187 (52.94%), Postives = 132/187 (70.59%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TAIR10
Match: AT3G22190.1 (AT3G22190.1 IQ-domain 5) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TAIR10
Match: AT2G26180.1 (AT2G26180.1 IQ-domain 6) HSP 1 Score: 115.5 bits (288), Expect = 4.7e-26 Identity = 85/247 (34.41%), Postives = 124/247 (50.20%), Query Frame = 1
BLAST of CmaCh16G004150 vs. TAIR10
Match: AT2G26410.1 (AT2G26410.1 IQ-domain 4) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22 Identity = 74/211 (35.07%), Postives = 121/211 (57.35%), Query Frame = 1
BLAST of CmaCh16G004150 vs. NCBI nr
Match: gi|659101620|ref|XP_008451703.1| (PREDICTED: protein IQ-DOMAIN 1-like [Cucumis melo]) HSP 1 Score: 443.0 bits (1138), Expect = 3.7e-121 Identity = 224/258 (86.82%), Postives = 239/258 (92.64%), Query Frame = 1
BLAST of CmaCh16G004150 vs. NCBI nr
Match: gi|778691615|ref|XP_011653310.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus]) HSP 1 Score: 436.0 bits (1120), Expect = 4.5e-119 Identity = 221/258 (85.66%), Postives = 236/258 (91.47%), Query Frame = 1
BLAST of CmaCh16G004150 vs. NCBI nr
Match: gi|590609852|ref|XP_007021652.1| (IQ-domain 10 [Theobroma cacao]) HSP 1 Score: 240.7 bits (613), Expect = 2.8e-60 Identity = 132/251 (52.59%), Postives = 156/251 (62.15%), Query Frame = 1
BLAST of CmaCh16G004150 vs. NCBI nr
Match: gi|225443514|ref|XP_002272018.1| (PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]) HSP 1 Score: 240.0 bits (611), Expect = 4.7e-60 Identity = 140/266 (52.63%), Postives = 173/266 (65.04%), Query Frame = 1
BLAST of CmaCh16G004150 vs. NCBI nr
Match: gi|720074923|ref|XP_010279173.1| (PREDICTED: protein IQ-DOMAIN 1 [Nelumbo nucifera]) HSP 1 Score: 239.2 bits (609), Expect = 8.1e-60 Identity = 138/254 (54.33%), Postives = 167/254 (65.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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