CmoCh16G004470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCCATTGGAGAGGTGACCCTTCATCTTCCAGAGATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGGTAAGCTCTTGTTTCGTTTTTTAAGATTGTTTTGTCTTTTATCGTTCTACATTTTTTGTTCCATCCAATAGAGGAAGGGAAATCATCCGGTAAGCTTTTGTTGTTTTTTGTATTGCATTTCTTATTTATTACGGTTTCGATCAGTTCATGGTTATTTTTTTCTTCTGGCATTTGGATTGCGTGCATTGGTCACACTTCAGAAATCACATAATCTATTTGTTGTAATGTCTGCGAAGGATATGGATATGAACCTTTTGTACTTTTATGAACTTTTGTTTTTTGTTTCTCATTTTGATTAGCATTCGTTTTTGTTTATCTCTGTGCACCGTACTTCGAATCTTACATTGCAAACCCTCTATGAAGTATGAACGCAATGGAGGATTAATGGTGATGATGAGAAGGATCTATTTGTTTTGGTTGTGAATTAGTTTTAGGTTTTGTAACAATTATCTTGATTTGTCTGGTGGTTCACGGGTTTTTCTGCATTCATGCCCTGTTTACTCTCCAGTAGAGCATATAATCTATTTGATTAAATTTCTGTGATGAGTAGGAGTATGAGACTCTAATCTGTGCACTTTGCATTTTCCATTTTGATTAGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTAAGCTTTCTCTTTCATTTGTTCTCTCTTGAAGATATGAATTAAGGCTATAGTAACAGTCTTTTCATCGTTCTCTATTTCTTCATGCATGTTTGTATATTGCAATGTTTTATATATATTTTTTTTGTTGGGAACTTAGCAGGAACCTCATTATTTGGGCATAAAAAAGGGAATTGATTAGGTTGGTTGTGAAGATTACTCAGTTCAATAATTTTTTGGCTTTTAGTCTTGTATTTTGTGCGTCGTCTCTGGTTACGAACTTCTGCTGAAGTACAGAACCAGGAGAAACTTATTCAAATTTAAATTTAACGTTTGATTTCTCTACCTAATATTTGGAGGTATAAGCTTCCTAATTTATTGATTATTGCTTGGAGTTTTACCTTGTTCATCATATCACTGAAATATTTGTTTCTCATAAAAAAAATCACATCAGTTATTGTGGTAGTTTGTTAAAGCTTTATCTGTCTCTTGCTTTCCTTTTGAATGAACCTCTCATGAGAACAAATTGAGATTGAAAAATTATTTTTCTAAACAAAAACTTAGTGAAATATGATGTCTCTGTTATTATCGAATTCTTAACTCGCTTCTCCATTTCCCCACTTATGCTCCTCTTCAAATAACTACATTTGCACTTGTTCTTATCAAAATTTCAGTTATTGTAAGTTGCTCTGTCTTGTTCATGGGTCAGGTACACGGAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGTATATTGAATGTGCTTAATAATTTGTTACCTATCTATTTTGCTTTCTTCTCACACTGATGATCGATTGAGCTGCTTCCCGTAGCTTTACCATGTTGCTTTATTTCCAGCTCCCTTGGATCCAATTTGTTGGCTAACTTATGCCCCTACAATAAATTATAAACGCTGGAGCTGCTTCTTCAGAGATCAGAATCAGTGATTCGTATACTGTCTTTTGGTTATTCTTCAATGGCGTTGTTTTAAATGTTATTCCCATTTCCCAGTTCATGGTTTTTGATTAACCGATGGAATAAGGAAGAGCAATCCAAACAATATCAGCAACAAGAACGAAGTCATAATCTTCTTGTATCTCGTGAACTAACTAACAAAGAATCTCGAATCCAACTACTTTGGTTCTGATTCATAATAACTTTTTATTGAGGCTTGCCTTCACTCGACTTAGATATTATTGTTTGTGATGCTGAAACAACGTCTTTACATTCCAGGCATATTTAGAGTTCAGTTTTTTCCAGATTCATATCTAAAAATGAGTTCTTCAGGTATTATCTTGTCATTTTGTGCCTTTGTTGGCCACAATACTTGTGATTGCCTAACCTATAATTTTGTATGATGCTGATGCGGTCAACATTTATACTAACCAAAGAAGATTCCAACATTACCTATGATCTATTTGTTATACAGACATGTACCTCGATGGTAATAACAAATGAATCGATCATTTTTTATGAGATGGTTTAATCTTTTGTCTTCCAGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAAGTGCCATTAACTGTCTTCCATGAATTTTTTAATATTCTGATTGAGTACTCATTTTCTACTGGGAAAGTTGAACAAAATCCTTTCGGGTTTGTTCGAATCTTAGGAGATCAGCGTTATCATTGCTTTGGTTGCTGCTTAAAACGGTCATGCTTACATAGGAATTGTATGGGAAATAGCATAGTTATGAAATATTCTGTTTGTTAACTCACCTATATTTTATTTTGTTTACTCATTTATAATCCACTGCTTAATAGCGATTAAAGAAAATCAGGGGATTCTTTTTAATATCTACTTCAACAATCTAGGATCCATAAAATCTTTCCAAATTAGTCGTTTTTAGCCATTTTATATAATATTTTACTGTTGAGCTATTTTTAAAATATTATTTAAAATTTTTTAAATTTTCATTTGGTACTCTTTTTATTTCATTATTTGTTTTTATTTTTTAAATAAGCTTGCATGGTCACCTTTTTTAACGTTTAATTTTTCTGTTTAAAATCTTAGTCAAAATTTGAAATCTAATTAATGACTTAAAGAACATGTTTCTTCTGATTACAGTTATCATTCTTCCACTCTCCAGGGAGAAAATTTTAGGGTTTCTTTCAAGTACTTGATTTGTAGCTGAAGAGTATCGTTTATCTTGACTCAATTGTCAATTTACTAAAGACATAACATTATCTGTTGTGTGATGCTCAACCATCACAGGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGGTATGCTTCATCAATCACACATGGGCCTGAATTGAATTATACTCATTCAGTTATAGAAAGTTGAAACCTAACGTTTATACATATACTAGAAAAATGAAGAAAACAATAGATTTAACGAATTGGTTCTTAACATTTGCTCATCATTTGTTCTTTACAATATTATTTTTTCTTTCATTGAAAATAGTTAAGACACTTGAAAATATTGAAATACTAGTCAACCGTAGTAATTTTCCTAACTTCATCATATTCACTTGGTCAAAACATATATTTTCAATTCAGAGGTTAGAAGTCTGAATCTCTAATCTCATATATCTCAACTAAGACATGCATTTAACAAAAATTTAAAAGTTTGAATTTCTCACTAACTTGCCAAACAAGTTAATTATTAATTTTTAAGTAGTGAGTGGTTTTGAATCATAAATCATTAATGAACTTTAAACCCTATTTAATACATTATTCAATGTCTTTGGGTGGTAAAAGATTGCTTAGTTGTAATCTGACCTTAGAAAAAACTTTTCTCGGATTTAAATTTTATATTGGTCCAAAAAGTTGAACCCTCATTTTCCTTTGGCTCTTGTATCTTCTATTTTTCTGGGATAATTTCCAATTTTTCATAAATACTTATAGTTTGTTTTGGGGCTCATTGTTAAATATTTTGCATTGTATTTAATAAAACTCACAAGCCACATGTTTTGAATTTAATGCTAGACTGGAGAAATGACCTAAAACGCAAGTCTATATGGTATTAAGCAAATTTTTTTATAAAAATATTTAAAGTATTTGATGATAAAGATCAAAATTAACCTTCTAACTTGGTACTGAACAAAACATTAAAAAGTTTGAGGACCAAGATAAAATAAGGAAGAAAGTTGAGAGATAATATTCAATGAATTAAATCACTAATTGACTTTACTTATCTCATATTAAATGTTTGTTTATTGACAAGATTTCTTAACGGAACTTTACTCTTAAATTATTGCGTGCTCAAATTATTATATCATTAAAGAATTGTCTCGTCTTAGATCACTACTCACTTATTTTTCTGTCTCTTTCATATAAACTGTAGCACTCATTACTATTATCTTGAATTAAATCACTAAGCTGTTTTTCCTTTTTGATTGACATGAGTATGCTTACTTTTGGCCATTTTTTAATTTGTACGAAACCATTTCGCTTATATCCTTTTTTATTATGAAAATTAAACACAATGATGAGTGAAAACACATCAAACAGCCAAATGTACCTATTTATTACCAATTATGAAGCAAACTGAGCAAATAAATCAATGCTGAGAAGATCAAAATCAGTTGGTAAAGAGGGTATATTTTATACCTGTTGACAAATAAGAGTTCTTTATCAGCATGAAATCAGTTCCTGTTTTTGTCTGCAAATAACAAAGCCTTTAAAGGAAAATTGTGACTTTTCTGTTATGTCATTTAATGGTGAACCCCATCTGCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTCCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGAAACAAGCTACAAGAAGCTGAAGGCCTTTTCCATATATAATCAGTCAACCCACAAACCACTGCTGACAAATTCAGTGAAATGAATTTGGTAGTTCTCACTATAATTTCACTCGGCTTGCTTTGTAGTGTGAATCTCTATTATTCTTCCCAATAACAGAGAAGACTTCATATTTTCCGTGAAAAAAACATGCTTAATGTTCCATCATTTTCTTCCGCTAGGCATTTCCTTGATTATAGTTTGCTATTCTCAAGAAAAAAGATACAAGGTTCATGATCTAAGAGGTCTCATTTGCTCTTTCCTTGCTCTGTATGGACTGAATTAAAGAAGCACCAATTAAAGCAGGGCATTGTCACTATCTCCACATGAGACAATTTTATTATCCAAGAGACTGCAGTAGAGAAGAAAGAGGGAGAGAGACATTCCAGCTAGATTGTGGAATTTACAGGGTTGGGGACCATAGGCAGATGATGAAACAAAATAATTAGGTGGTATCCATCTGTATATGCTTCTATATTTGAGCATTTTTGTGTTCATGCCCTTCTTTCTTGGCTGTTCAGTAGATTTACTCCACTCTACCCACTTGGTCACCGGTCGCCCTATCTATCACATTCATATTGAATATGGAGCAACATTTCAGATTCCTCTACCTCAGGATCTTATTGAGTTCTAATCATTTCCCAAACATTGCTTCAGAAGGAAATACTATCCCTTAT CCGCCATTGGAGAGGTGACCCTTCATCTTCCAGAGATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGGAAGGGAAATCATCCGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGGAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTCCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGAAACAAGCTACAAGAAGCTGAAGGCCTTTTCCATATATAATCAGTCAACCCACAAACCACTGCTGACAAATTCAGTGAAATGAATTTGGTAGTTCTCACTATAATTTCACTCGGCTTGCTTTGTAGTGTGAATCTCTATTATTCTTCCCAATAACAGAGAAGACTTCATATTTTCCGTGAAAAAAACATGCTTAATGTTCCATCATTTTCTTCCGCTAGGCATTTCCTTGATTATAGTTTGCTATTCTCAAGAAAAAAGATACAAGGTTCATGATCTAAGAGGTCTCATTTGCTCTTTCCTTGCTCTGTATGGACTGAATTAAAGAAGCACCAATTAAAGCAGGGCATTGTCACTATCTCCACATGAGACAATTTTATTATCCAAGAGACTGCAGTAGAGAAGAAAGAGGGAGAGAGACATTCCAGCTAGATTGTGGAATTTACAGGGTTGGGGACCATAGGCAGATGATGAAACAAAATAATTAGGTGGTATCCATCTGTATATGCTTCTATATTTGAGCATTTTTGTGTTCATGCCCTTCTTTCTTGGCTGTTCAGTAGATTTACTCCACTCTACCCACTTGGTCACCGGTCGCCCTATCTATCACATTCATATTGAATATGGAGCAACATTTCAGATTCCTCTACCTCAGGATCTTATTGAGTTCTAATCATTTCCCAAACATTGCTTCAGAAGGAAATACTATCCCTTAT ATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGGAAGGGAAATCATCCGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGGAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTCCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA
BLAST of CmoCh16G004470 vs. Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.1e-19 Identity = 73/227 (32.16%), Postives = 113/227 (49.78%), Query Frame = 1
BLAST of CmoCh16G004470 vs. Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.3e-08 Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TrEMBL
Match: A0A0A0KVH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G088730 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 7.5e-118 Identity = 220/256 (85.94%), Postives = 233/256 (91.02%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TrEMBL
Match: A0A061F933_THECC (IQ-domain 10 OS=Theobroma cacao GN=TCM_031705 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 9.9e-62 Identity = 133/251 (52.99%), Postives = 158/251 (62.95%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TrEMBL
Match: A0A151S9C1_CAJCA (Protein IQ-DOMAIN 1 OS=Cajanus cajan GN=KK1_026825 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 3.8e-61 Identity = 126/209 (60.29%), Postives = 159/209 (76.08%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TrEMBL
Match: D7TJI1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00860 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 4.9e-61 Identity = 143/266 (53.76%), Postives = 174/266 (65.41%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TrEMBL
Match: E0CSC0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01690 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60 Identity = 144/283 (50.88%), Postives = 173/283 (61.13%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TAIR10
Match: AT3G15050.1 (AT3G15050.1 IQ-domain 10) HSP 1 Score: 212.2 bits (539), Expect = 4.7e-55 Identity = 127/264 (48.11%), Postives = 157/264 (59.47%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TAIR10
Match: AT2G33990.1 (AT2G33990.1 IQ-domain 9) HSP 1 Score: 200.7 bits (509), Expect = 1.4e-51 Identity = 100/187 (53.48%), Postives = 134/187 (71.66%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TAIR10
Match: AT3G22190.1 (AT3G22190.1 IQ-domain 5) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TAIR10
Match: AT2G26180.1 (AT2G26180.1 IQ-domain 6) HSP 1 Score: 116.7 bits (291), Expect = 2.7e-26 Identity = 85/247 (34.41%), Postives = 123/247 (49.80%), Query Frame = 1
BLAST of CmoCh16G004470 vs. TAIR10
Match: AT2G26410.1 (AT2G26410.1 IQ-domain 4) HSP 1 Score: 101.7 bits (252), Expect = 9.0e-22 Identity = 73/211 (34.60%), Postives = 120/211 (56.87%), Query Frame = 1
BLAST of CmoCh16G004470 vs. NCBI nr
Match: gi|659101620|ref|XP_008451703.1| (PREDICTED: protein IQ-DOMAIN 1-like [Cucumis melo]) HSP 1 Score: 438.7 bits (1127), Expect = 8.8e-120 Identity = 223/256 (87.11%), Postives = 236/256 (92.19%), Query Frame = 1
BLAST of CmoCh16G004470 vs. NCBI nr
Match: gi|778691615|ref|XP_011653310.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus]) HSP 1 Score: 431.8 bits (1109), Expect = 1.1e-117 Identity = 220/256 (85.94%), Postives = 233/256 (91.02%), Query Frame = 1
BLAST of CmoCh16G004470 vs. NCBI nr
Match: gi|590609852|ref|XP_007021652.1| (IQ-domain 10 [Theobroma cacao]) HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61 Identity = 133/251 (52.99%), Postives = 158/251 (62.95%), Query Frame = 1
BLAST of CmoCh16G004470 vs. NCBI nr
Match: gi|743770590|ref|XP_010915584.1| (PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Elaeis guineensis]) HSP 1 Score: 245.0 bits (624), Expect = 1.9e-61 Identity = 143/273 (52.38%), Postives = 173/273 (63.37%), Query Frame = 1
BLAST of CmoCh16G004470 vs. NCBI nr
Match: gi|1012340171|gb|KYP51392.1| (Protein IQ-DOMAIN 1 [Cajanus cajan]) HSP 1 Score: 243.4 bits (620), Expect = 5.4e-61 Identity = 126/209 (60.29%), Postives = 159/209 (76.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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