Csa4G056610 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATCTATATATATATATATATAACGATTTCTTCAAGAATTCAAGTCTCCTCCTCTCTATCTTCATATTCCAACAACCAAATCCTCCATTTCATCGGTAAATTCTCTCTCTCTTTTTCTCCTTTACGCGTTTTCTTTGTTTTGGAATTTTATTTTGATCTGCGTAGTACCCACAAATCGGAACTCCAAATATGTTACAATACCAGATTATTGCTTTGCTTTCCTTTTTTATTTCTGAATCTGGAATTTCTGATTATAGATTAATCTTTTTGTTGAAATACGCTGGAATTCATTTTTTTTTAATTAGTGTTATTTGTTGATTTCAAATTATTTTTTGTATGTGTCTTACGTTTCGGGAGATCGTGAATCTACAATTGGTGATCGATTTCGTGTTCTTTATGATTTGTGATCGGTTGTGATTGCGTTTATGGTTGTATCATTTTCTGTCGTGTGTTAATTTCTTTTAGGAAGTGGTATATTATGTAGAGAAGAACGGAGAGGGCAGGTTCAACTATTGATGTTTGAGTTTTTCTCTAATTTGTTCTATTTGAAGTTTCATAATTGAAAGATTACATCTGTAAAAGTTGGAATGCAAATTTCGCTCCTTCTTATAAGTGTTGGGACATGATCATAACATATTATCTACACTACCGAGCTTAGATCTCTTTGGTTTATCAATATAGAAGTTGCATTTTACTCGCACATTGAAGATATTTTTTGTTCATTCTATGTTAGGCATGTTCACATCGTTAACAAGTTTTGTTAAATGTGATCAATCCTTTTTGTCTCGATCTTTCTGGAAAAGAAAAAAGACACTATGGAGATCATTTTAGAGGCTGTCGAGTCATTGGCGTGAAGTCTATTTTTTAAATGTCTTATAAGTTCCAACAAATTAGCGCATCTCGTTGATTGAGAAGCAATCAATTTCTCTTTTCCCCTGGAAGCTGTTTTTGGAATTGTAATTATCTTGAATGGTTCTCCTCTGTGCTAAATGAGGAGTGTTGTGTTCCTAACTTCTCTGGTTTGAGTGAAGTTTGTTTGTCAATTTTCAGTTGTTATTAGAAGCTGATAAATCATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGTATTGATCCAATTTTTTACATACATCACTGGGAAGTGTATTATTATTATTATTATTATTATTAGATGGTTTGTTTAGTTAAGTTGTTAATTTAGTTAATTACTTCAATTACTTTGTCAATTAGAATGCAGGAATTAATAATAATTTAGATAATTTTGTTAGACCATCTATAACCCAGGCACTTTTAGGTTGTAATAAGGCTTTTGAAACATTTCATTTTAGAAATTTTGATGTTATCTCCATTGTTCTTGTGATGGATTTTTGCTCCCTACTATGGCTTTTTAAAAACAATCTCATACAAGTACAAAGTTGTCACATAAGGGATTCAATTGATGGTTTTGATAGAAGATCTTCTTACAAAGTTGCTGATTCCAAATCTTTTTAAATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTAATTTTCCAGCCATCTCTTTTCACCGAGCCTTCTTCTTCGTCGGTCGATTTCAAGAATGGTGTCGGTGCAGATAGCGAGCGGCGTTACCATCTTCTTCTCTAATTTCTATAATGTCTTTTAAGACTCTGGATTTCGTATCTACTCTTATTGTCTCGACCACCTTTCTAATGGTTTGTGTACTCTTTTACTCTTTGGACGTCAATAATCTGGATCCATCTTTCCAGTTTTCACCTTATTTTTCTTCCTATTGTAAATTCTTTTGGTTTAACCTATAATTTAAAATGATGAAGATGTATTATTTGTTTTTTCATTGCTTAAATTATAGGAAGCAATGCTAATATCAATTTTGTGT ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTAA ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTAA MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHSAGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK*
BLAST of Csa4G056610 vs. Swiss-Prot
Match: GRP3_DAUCA (Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.4e-41 Identity = 89/145 (61.38%), Postives = 97/145 (66.90%), Query Frame = 1
BLAST of Csa4G056610 vs. Swiss-Prot
Match: ANXA7_DICDI (Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 7.4e-17 Identity = 43/76 (56.58%), Postives = 43/76 (56.58%), Query Frame = 1
HSP 2 Score: 86.7 bits (213), Expect = 2.8e-16 Identity = 44/81 (54.32%), Postives = 44/81 (54.32%), Query Frame = 1
HSP 3 Score: 86.7 bits (213), Expect = 2.8e-16 Identity = 49/99 (49.49%), Postives = 49/99 (49.49%), Query Frame = 1
HSP 4 Score: 82.4 bits (202), Expect = 5.3e-15 Identity = 39/62 (62.90%), Postives = 37/62 (59.68%), Query Frame = 1
HSP 5 Score: 81.3 bits (199), Expect = 1.2e-14 Identity = 40/63 (63.49%), Postives = 38/63 (60.32%), Query Frame = 1
BLAST of Csa4G056610 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15 Identity = 43/88 (48.86%), Postives = 46/88 (52.27%), Query Frame = 1
BLAST of Csa4G056610 vs. Swiss-Prot
Match: OPSD_SEPOF (Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.9e-15 Identity = 37/57 (64.91%), Postives = 35/57 (61.40%), Query Frame = 1
HSP 2 Score: 80.1 bits (196), Expect = 2.6e-14 Identity = 40/68 (58.82%), Postives = 39/68 (57.35%), Query Frame = 1
HSP 3 Score: 68.2 bits (165), Expect = 1.0e-10 Identity = 34/61 (55.74%), Postives = 32/61 (52.46%), Query Frame = 1
HSP 4 Score: 55.8 bits (133), Expect = 5.3e-07 Identity = 25/49 (51.02%), Postives = 25/49 (51.02%), Query Frame = 1
BLAST of Csa4G056610 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 7.7e-14 Identity = 41/82 (50.00%), Postives = 40/82 (48.78%), Query Frame = 1
BLAST of Csa4G056610 vs. TrEMBL
Match: A0A0A0KV55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056610 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 6.1e-111 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of Csa4G056610 vs. TrEMBL
Match: F6HJ21_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00780 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.4e-64 Identity = 136/191 (71.20%), Postives = 141/191 (73.82%), Query Frame = 1
BLAST of Csa4G056610 vs. TrEMBL
Match: V7CDY8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G278700g PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62 Identity = 131/208 (62.98%), Postives = 135/208 (64.90%), Query Frame = 1
BLAST of Csa4G056610 vs. TrEMBL
Match: A0A0L9URY1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066300 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.8e-62 Identity = 127/194 (65.46%), Postives = 136/194 (70.10%), Query Frame = 1
BLAST of Csa4G056610 vs. TrEMBL
Match: A0A0S3T3K4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G133800 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.8e-62 Identity = 127/194 (65.46%), Postives = 136/194 (70.10%), Query Frame = 1
BLAST of Csa4G056610 vs. TAIR10
Match: AT4G19200.1 (AT4G19200.1 proline-rich family protein) HSP 1 Score: 207.6 bits (527), Expect = 6.2e-54 Identity = 116/192 (60.42%), Postives = 123/192 (64.06%), Query Frame = 1
BLAST of Csa4G056610 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein) HSP 1 Score: 199.1 bits (505), Expect = 2.2e-51 Identity = 111/189 (58.73%), Postives = 119/189 (62.96%), Query Frame = 1
BLAST of Csa4G056610 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein) HSP 1 Score: 178.3 bits (451), Expect = 4.0e-45 Identity = 100/187 (53.48%), Postives = 113/187 (60.43%), Query Frame = 1
BLAST of Csa4G056610 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein) HSP 1 Score: 174.9 bits (442), Expect = 4.4e-44 Identity = 97/175 (55.43%), Postives = 103/175 (58.86%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 2.1e-14 Identity = 70/204 (34.31%), Postives = 73/204 (35.78%), Query Frame = 1
BLAST of Csa4G056610 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 40/77 (51.95%), Postives = 40/77 (51.95%), Query Frame = 1
HSP 2 Score: 40.8 bits (94), Expect = 1.0e-03 Identity = 20/42 (47.62%), Postives = 22/42 (52.38%), Query Frame = 1
BLAST of Csa4G056610 vs. NCBI nr
Match: gi|778691231|ref|XP_004150942.2| (PREDICTED: glycine-rich protein A3 [Cucumis sativus]) HSP 1 Score: 407.9 bits (1047), Expect = 8.8e-111 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of Csa4G056610 vs. NCBI nr
Match: gi|659101947|ref|XP_008451874.1| (PREDICTED: glycine-rich protein A3-like [Cucumis melo]) HSP 1 Score: 365.5 bits (937), Expect = 5.0e-98 Identity = 163/173 (94.22%), Postives = 164/173 (94.80%), Query Frame = 1
BLAST of Csa4G056610 vs. NCBI nr
Match: gi|672180629|ref|XP_008810512.1| (PREDICTED: glycine-rich protein A3-like [Phoenix dactylifera]) HSP 1 Score: 258.1 bits (658), Expect = 1.1e-65 Identity = 133/195 (68.21%), Postives = 143/195 (73.33%), Query Frame = 1
BLAST of Csa4G056610 vs. NCBI nr
Match: gi|695055819|ref|XP_009416107.1| (PREDICTED: glycine-rich protein A3-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 252.3 bits (643), Expect = 6.2e-64 Identity = 131/199 (65.83%), Postives = 139/199 (69.85%), Query Frame = 1
BLAST of Csa4G056610 vs. NCBI nr
Match: gi|225427603|ref|XP_002271036.1| (PREDICTED: glycine-rich protein A3 [Vitis vinifera]) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63 Identity = 136/191 (71.20%), Postives = 141/191 (73.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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