BLAST of Csa4G055990 vs. Swiss-Prot
Match:
PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2)
HSP 1 Score: 642.5 bits (1656), Expect = 5.4e-183
Identity = 328/669 (49.03%), Postives = 449/669 (67.12%), Query Frame = 1
Query: 42 SQDQLHLWVSSVLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASN 101
S LH +SSVLS SLD +C L+ LSP +FD+LF K NP T L+FF AS+
Sbjct: 72 SDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASD 131
Query: 102 SFKFRFTIHSYCTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGL 161
SF F F++ SYC LI LL+ + + AR++LIRLI+GN+PVL + IA+A+ L
Sbjct: 132 SFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASL 191
Query: 162 TSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVK 221
+ + DLLI VY TQF+ G A+DVF +LA KG FPS TCN LL+SLV+
Sbjct: 192 SLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVR 251
Query: 222 ANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTY 281
ANEF+KCCE F V+ +G PDV+ FT INA CKGGK+E A++LF KME+ G++PNVVT+
Sbjct: 252 ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 311
Query: 282 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIG 341
N +I+GL GR D AF KEKM +G++P L TY L+ GL + VL EM
Sbjct: 312 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371
Query: 342 SGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEH 401
GF PNV+V+NNLID + + G++ A++IKD+M+SK ++ TS T +L++G+CK+ Q ++
Sbjct: 372 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 431
Query: 402 AENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVC 461
AE L+E+LS G +++ + SV+ LC + SA RF ML RN P LLT L+
Sbjct: 432 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 491
Query: 462 GLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPM 521
GLCK GKH +A ELWF+ L KG TSNAL+HGLC AGKL EA RI KE+L RG M
Sbjct: 492 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 551
Query: 522 DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLW 581
DR++YN LI G C + K++ F +EM KRG++PD YTY+ L+ GL N+ K+++AI+ W
Sbjct: 552 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 611
Query: 582 DEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQN 641
D+ K +G++ +++TY +M++G CKA R E+ + F+E++SK ++ N++VYN +I+A+C++
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671
Query: 642 GNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCY 701
G ++ AL+L E+MK KGI PN ATY+SLI G+ I VE+AK L +EMR EG PNV Y
Sbjct: 672 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 731
Query: 702 TALIGGYCK 711
TALI GY K
Sbjct: 732 TALIDGYGK 740
HSP 2 Score: 244.6 bits (623), Expect = 3.3e-63
Identity = 153/535 (28.60%), Postives = 256/535 (47.85%), Query Frame = 1
Query: 181 YSTQFRNLGFSCAVDVFYLLARK----GTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS 240
++T LG D ++ K G P+L T + L+ L +A V + M+
Sbjct: 311 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 370
Query: 241 E-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLD 300
+ G P+V + N+I++ + G + AIE+ M G+S TYN +I G C+NG+ D
Sbjct: 371 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 430
Query: 301 NAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLI 360
NA L ++M G N ++ ++I L FD + EM+ +P + LI
Sbjct: 431 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 490
Query: 361 DGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLS 420
G CK G AL++ ++K + T +L+ G C++ +++ A +EIL G
Sbjct: 491 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 550
Query: 421 IHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 480
+ + +++ C K + AF F M+ R +P + ++L+CGL K EA +
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 610
Query: 481 WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCN 540
W G T + +I G C A + E EM+ + + + + YN LI +C
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 670
Query: 541 EGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHT 600
G++ LRE+M +GI P+ TY L++G+ + ++++A L++E + GL N+
Sbjct: 671 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 730
Query: 601 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 660
Y +++GY K ++ VE L E+ SK + N I Y ++I + ++GNV A +LL M+
Sbjct: 731 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 790
Query: 661 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
KGI+P+ TY I+G G V +A DE Y A+I G+ K
Sbjct: 791 EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN----------YAAIIEGWNK 835
BLAST of Csa4G055990 vs. Swiss-Prot
Match:
PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 285.8 bits (730), Expect = 1.3e-75
Identity = 159/514 (30.93%), Postives = 271/514 (52.72%), Query Frame = 1
Query: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVIN 252
AV +F + + FPS+ + LLS++ K N+F+ + M P + ++++ +IN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 253 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 312
C+ ++ A+ + KM KLG PN+VT + ++NG C + R+ A L ++M V G QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 313 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 372
N T+ LI+GL N + ++D M+ G P++V + +++G CK G+ + A +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 373 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 432
+ M + P + +++ G CK ++ A N +E+ + G+ + S++ LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 433 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 492
R+ A R M+ R P + L+ K+GK +EA +L+ ++++ S VT
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 493 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 552
++LI+G C +L EA ++ + M+ + D +TYN LI GFC +VE + EM++
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 553 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 612
RG+ + TYN L++GL G D A +++ E + G+ NI TY +++G CK ++E
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 613 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 672
+F L KME YNI+I+ C+ G V L N+ KG+ P+ Y+++I
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 673 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 706
G C G E+A L EM+++G +PN CY LI
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
HSP 2 Score: 199.1 bits (505), Expect = 1.6e-49
Identity = 143/500 (28.60%), Postives = 240/500 (48.00%), Query Frame = 1
Query: 110 HSYCTLILLLIRSKFIPPARLLLIRLID-GNLP-------VLNLDSEKFHIEIANALFGL 169
++Y LI R +P A +L +++ G P +LN I A AL
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 170 TSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVK 229
V G T F+ LIH F + S A+ + + KG P L T +++ L K
Sbjct: 177 MFVTGYQPNTVTFNTLIHGL---FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 236
Query: 230 ANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVT 289
+ + + M +G P V + +I+ LCK M++A+ LF +ME GI PNVVT
Sbjct: 237 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 296
Query: 290 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI 349
Y+ +I+ LC GR +A L M + + P++ T+ ALI+ +K + + DEM+
Sbjct: 297 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 356
Query: 350 GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 409
+P++V +++LI+G+C ++ A ++ + M+SK+ P VT +L++GFCK ++E
Sbjct: 357 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 416
Query: 410 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 469
E+ GL + ++ L + A K M+S P+ + L+
Sbjct: 417 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 476
Query: 470 CGLCKDGKHLEATELWFRLLEKGSPASKV-TSNALIHGLCGAGKLPEASRIVKEMLERGL 529
GLCK+GK LE + F L++ + T N +I G+C AGK+ + + + +G+
Sbjct: 477 DGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 536
Query: 530 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 589
D + YN +I GFC +G E L +EM + G P+ YN L+R G + + +
Sbjct: 537 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 596
Query: 590 LWDEFKASGLISNIHTYGIM 600
L E ++ G + T G++
Sbjct: 597 LIKEMRSCGFAGDASTIGLV 612
BLAST of Csa4G055990 vs. Swiss-Prot
Match:
PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 282.7 bits (722), Expect = 1.1e-74
Identity = 188/645 (29.15%), Postives = 314/645 (48.68%), Query Frame = 1
Query: 66 ALLPHLSPSQFDQLFFSI-GLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKF 125
+L P+ + D L + + +K + L+FF +A + + + S C +I L + SK
Sbjct: 77 SLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNLESLCIVIHLAVASKD 136
Query: 126 IPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYST- 185
+ A+ L+ + P LN+ + Q FDLL++ Y
Sbjct: 137 LKVAQSLISSFWER--PKLNVTDS---------------------FVQFFDLLVYTYKDW 196
Query: 186 ----QFRNLGFSCAVD---------VFYLLARKGTFPSLKTCNFLLSSLVK-ANEFEKCC 245
+ ++ F VD VF + G S+ +CN L+ L K +
Sbjct: 197 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 256
Query: 246 EVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGL 305
VFR E G C +V S+ VI+ +C+ G+++ A L + ME G +P+V++Y+ ++NG
Sbjct: 257 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 316
Query: 306 CQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNV 365
C+ G LD ++L E M KG++PN YG++I L ++ + EMI G P+
Sbjct: 317 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 376
Query: 366 VVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 425
VV+ LIDG+CK G+I A K M S++ITP +T +++ GFC+ + A E
Sbjct: 377 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 436
Query: 426 ILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK 485
+ GL +++ CK AFR M+ P+ + T L+ GLCK+G
Sbjct: 437 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 496
Query: 486 HLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNA 545
A EL + + G + T N++++GLC +G + EA ++V E GL D +TY
Sbjct: 497 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 556
Query: 546 LILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASG 605
L+ +C G+++ + +EM +G+QP I T+N L+ G C G L+D KL + A G
Sbjct: 557 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 616
Query: 606 LISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAAL 665
+ N T+ +++ YC N ++ ++ ++ S+ + + Y ++K HC+ N+ A
Sbjct: 617 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 676
Query: 666 QLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 694
L + MK KG + +TYS LI G +A+ + D+MR+EG
Sbjct: 677 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
BLAST of Csa4G055990 vs. Swiss-Prot
Match:
PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 280.0 bits (715), Expect = 7.1e-74
Identity = 204/753 (27.09%), Postives = 349/753 (46.35%), Query Frame = 1
Query: 7 KISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLDSSKCSA 66
K S V P +RR C S P + + S H +S + + S +
Sbjct: 26 KFSTDVTVPSPVTRRQFC--SVSPLLRNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKS 85
Query: 67 LLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIP 126
++ +SPS LF L +P T LNF ++ S + +++ +++SY +L+ LLI + ++
Sbjct: 86 MVSAISPSHVSSLF---SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 145
Query: 127 PA---RLLLIRLIDG---NLPVLNL-----DSEKFHIE----------IANAL--FGLTS 186
RLL+I+ D L VL+L E+F ++ + N+L FGL
Sbjct: 146 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVD 205
Query: 187 VVGRFEWTQAFDLLIHVYSTQFRNLGFSC-------AVDVFYLLARKGTFPSLKTCNFLL 246
+ + D + T + + C A + G P T L+
Sbjct: 206 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 265
Query: 247 SSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKMENAIELFMKMEKLGIS 306
+ + + +VF M C + ++T++I+ LC +++ A++LF+KM+
Sbjct: 266 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 325
Query: 307 PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHV 366
P V TY +I LC + R A L ++M G++PN+ TY LI+ L F+K +
Sbjct: 326 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 385
Query: 367 LDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 426
L +M+ G PNV+ +N LI+GYCK G IE A+ + ++M S+ ++P + T L++G+CK
Sbjct: 386 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 445
Query: 427 SDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLL 486
S+ + A L ++L + S++ C+ + SA+R +M R P
Sbjct: 446 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 505
Query: 487 LTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML 546
T ++ LCK + EA +L+ L +KG + V ALI G C AGK+ EA ++++ML
Sbjct: 506 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 565
Query: 547 ERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD 606
+ + +T+NALI G C +GK++ L E+M K G+QP + T L+ L G D
Sbjct: 566 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 625
Query: 607 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 666
A + + +SG + HTY ++ YC+ R+ D E++ ++ + + Y+ +I
Sbjct: 626 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 685
Query: 667 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH------------------GVCNIG 711
K + G A +L+ M+ G P+ T+ SLI + N+
Sbjct: 686 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 745
HSP 2 Score: 195.7 bits (496), Expect = 1.8e-48
Identity = 130/538 (24.16%), Postives = 253/538 (47.03%), Query Frame = 1
Query: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 252
A+++ + G P++ T L+ SL +FEK E+ +++ +G P+V ++ +IN
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 253 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 312
CK G +E+A+++ ME +SPN TYN +I G C++ + A + KM + V P
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLP 461
Query: 313 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 372
++ TY +LI+G + FD +L M G P+ + ++ID CK +E A +
Sbjct: 462 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 521
Query: 373 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 432
D + K + P V +L+ G+CK+ +++ A LE++LS + +++H LC
Sbjct: 522 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 581
Query: 433 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 492
+ A + M+ +P+ T+L+ L KDG A + ++L G+ T
Sbjct: 582 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 641
Query: 493 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 552
I C G+L +A ++ +M E G+ D TY++LI G+ + G+ F + + M
Sbjct: 642 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 701
Query: 553 RGIQPDIYTYNFLLR------------------GLCNVGKLDDAIKLWDEFKASGLISNI 612
G +P +T+ L++ + N+ + D ++L ++ + N
Sbjct: 702 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 761
Query: 613 HTYGIMMEGYCKANRIEDVENLFNEL-LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 672
+Y ++ G C+ + E +F+ + ++ + + +V+N ++ C+ A ++++
Sbjct: 762 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 821
Query: 673 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
+M G LP + LI G+ G E + + + G+ + + + +I G K
Sbjct: 822 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
HSP 3 Score: 108.6 bits (270), Expect = 2.8e-22
Identity = 75/335 (22.39%), Postives = 155/335 (46.27%), Query Frame = 1
Query: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCKGGK 259
+ + G P++ T L+ L+K +F+ F+ M S G PD ++T I C+ G+
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 260 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 319
+ +A ++ KM + G+SP++ TY+ +I G G+ + AF++ ++M G +P+ T+ +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 320 LINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 379
LI L+++ + + G P + +N+++ + +++ + M+ +
Sbjct: 713 LIKHLLEMKYGKQ----------KGSEPELCAMSNMME-------FDTVVELLEKMVEHS 772
Query: 380 ITPTSVTLYSLMQGFCKSDQIEHAENALEEI-LSSGLSIHPDNCYSVVHWLCKKFRYHSA 439
+TP + + L+ G C+ + AE + + + G+S +++ CK +++ A
Sbjct: 773 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 832
Query: 440 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 499
+ M+ P +L+CGL K G+ T ++ LL+ G ++ +I G
Sbjct: 833 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 892
Query: 500 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 533
+ G + + M + G TY+ LI G
Sbjct: 893 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
BLAST of Csa4G055990 vs. Swiss-Prot
Match:
PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 273.9 bits (699), Expect = 5.1e-72
Identity = 157/514 (30.54%), Postives = 266/514 (51.75%), Query Frame = 1
Query: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 252
AVD+F + + PS+ N LLS++ K N+F+ + R+ + D++S+ +IN
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 253 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 312
C+ ++ A+ + KM KLG P++VT + ++NG C R+ A L ++M V QP
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 313 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 372
N T+ LI+GL N + ++D M+ G P++ + +++G CK G+I+ AL +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 373 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 432
M I V +++ C + A N E+ + G+ + S++ LC
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 433 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 492
R+ A R M+ R P+ + + L+ K+GK +EA +L+ ++++ T
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 493 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 552
++LI+G C +L EA + + M+ + + +TYN LI GFC +VE L EM++
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 553 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 612
RG+ + TYN L++GL G D A K++ + + G+ +I TY I+++G CK ++E
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 613 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 672
+F L KME + YNI+I+ C+ G V L ++ KG+ PN Y+++I
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 673 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 706
G C GL E+A L EM+++G +PN Y LI
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
HSP 2 Score: 238.8 bits (608), Expect = 1.8e-61
Identity = 167/604 (27.65%), Postives = 288/604 (47.68%), Query Frame = 1
Query: 86 KANPMTCLNFFYFASNSFKFRFTIHSYCTLILLL----------IRSKFIPPA---RLLL 145
KA+P+ L YF++ S+ +R + L L L ++S+ +P LL
Sbjct: 28 KASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLL 87
Query: 146 IRLIDGNL--PVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGF 205
+ N V++L ++ I+ L+ ++++LI+ + R
Sbjct: 88 SAIAKMNKFDLVISLGERMQNLRISYDLY-------------SYNILINCFC---RRSQL 147
Query: 206 SCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEF-EKCCEVFRVMSEGACPDVFSFTNV 265
A+ V + + G P + T + LL+ E V ++ P+ +F +
Sbjct: 148 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 207
Query: 266 INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 325
I+ L K A+ L +M G P++ TY ++NGLC+ G +D A L +KM +
Sbjct: 208 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 267
Query: 326 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALK 385
+ ++ Y +I+ L + ++ EM G PNVV +N+LI C G A +
Sbjct: 268 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 327
Query: 386 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD--NCYSVVHW 445
+ MI + I P VT +L+ F K ++ AE +E++ SI PD S+++
Sbjct: 328 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLING 387
Query: 446 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 505
C R A ++M+S++ P+ + L+ G CK + E EL+ + ++G +
Sbjct: 388 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 447
Query: 506 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 565
VT N LI GL AG A +I K+M+ G+P D ITY+ L+ G C GK+E + E
Sbjct: 448 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 507
Query: 566 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 625
+ K ++PDIYTYN ++ G+C GK++D L+ G+ N+ Y M+ G+C+
Sbjct: 508 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 567
Query: 626 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 672
E+ + LF E+ NS YN +I+A ++G+ AA+ +L++ M+S G + + +T S
Sbjct: 568 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 613
BLAST of Csa4G055990 vs. TrEMBL
Match:
A0A0A0L008_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055990 PE=4 SV=1)
HSP 1 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD
Sbjct: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
Query: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI
Sbjct: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
Query: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC
Sbjct: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
Query: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
Query: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK
Sbjct: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
Query: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN
Sbjct: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
Query: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
Query: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
Query: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
Query: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL
Sbjct: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
Query: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK
Sbjct: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
BLAST of Csa4G055990 vs. TrEMBL
Match:
M5WX26_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001463mg PE=4 SV=1)
HSP 1 Score: 854.7 bits (2207), Expect = 7.8e-245
Identity = 433/718 (60.31%), Postives = 531/718 (73.96%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVS-STQPHKEHHQDPPWQ-------SQDQLHLWVSS 60
M L R ISK T +LF +R L CV+ + Q KE Q PP Q LH WVSS
Sbjct: 1 MDLRRLSISKPT-LLFRINRPLTCVTCNLQRPKEPPQPPPLQVPKEPQPPNQSLHNWVSS 60
Query: 61 VLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSY 120
+LS SLDSSKC AL+P LS +FD++F SI NP T L+FFYFAS SFKF+FT+ S+
Sbjct: 61 ILSKPSLDSSKCKALIPLLSSHEFDRVFCSISSNVNPKTALHFFYFASESFKFQFTVRSF 120
Query: 121 CTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQ 180
C L+ LLI S + PARLLLIRLIDGN+PVL + + H+EIA A+ L +V + Q
Sbjct: 121 CVLVRLLILSNLVSPARLLLIRLIDGNVPVLYANHNQRHMEIAIAMLDLNTVSTQGLGVQ 180
Query: 181 AFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF 240
A DLLIHVY TQF+N+GF A+D F + ++KG FPSLKTCNFLLSSLVKANE K +VF
Sbjct: 181 ALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLKTCNFLLSSLVKANELHKSYDVF 240
Query: 241 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 300
VM G PDV+ FT INA CKGGK+++AI LF KME LGI PNVVTYN II+GLC++
Sbjct: 241 EVMCRGVSPDVYLFTTAINAFCKGGKVDDAIGLFSKMEGLGIVPNVVTYNNIIHGLCKSR 300
Query: 301 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFN 360
RL AF+ K+KM V P+L TY LINGLIKL F N VL EM GF PN VV+N
Sbjct: 301 RLVEAFQFKKKMIENNVSPSLITYSVLINGLIKLEKFHDANCVLKEMCNRGFVPNEVVYN 360
Query: 361 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 420
LIDGYCK GNI ALKI+D M+S +TP SVTL SL+QGFC+SDQ +HAE L++I+S
Sbjct: 361 TLIDGYCKTGNISEALKIRDNMLSNGLTPNSVTLNSLLQGFCRSDQFDHAEQVLDKIISG 420
Query: 421 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA 480
GLSI+ C+SV+HWLC K R+ SA +FT ML RNFRPSD LLT LV GLCKDGKH EA
Sbjct: 421 GLSINQAVCFSVIHWLCMKSRFDSALKFTTEMLLRNFRPSDSLLTTLVGGLCKDGKHSEA 480
Query: 481 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 540
LWFRL EKG A+ TSNALIHGLC + + E ++K MLERGL +DRI+YN LILG
Sbjct: 481 LGLWFRLWEKGVAANTATSNALIHGLCESRSMQEVVMLLKPMLERGLVLDRISYNTLILG 540
Query: 541 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 600
C EGKVE F+L+EEM K+GI+PD YTYN L+ GLCN+GK+DDA+KLWDE + GL+ N
Sbjct: 541 CCKEGKVEEGFKLKEEMAKQGIEPDTYTYNLLMHGLCNMGKVDDAVKLWDECENRGLVPN 600
Query: 601 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 660
++TYG+M++GYC+A R+++ ENLF++L++K++ELNS+VYN +I+A+C +GN+ AAL L
Sbjct: 601 VYTYGVMIDGYCQAGRMKEGENLFSKLVNKEVELNSVVYNTLIRAYCTDGNMTAALGLRC 660
Query: 661 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
+MK KGI P+C TYSSLIHG+CNIG VEDAK L+DEMRK+G +PNVVCYTALI GYCK
Sbjct: 661 DMKKKGIQPSCGTYSSLIHGLCNIGDVEDAKCLLDEMRKDGLLPNVVCYTALIHGYCK 717
BLAST of Csa4G055990 vs. TrEMBL
Match:
M5WX26_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001463mg PE=4 SV=1)
HSP 1 Score: 256.1 bits (653), Expect = 1.2e-64
Identity = 137/477 (28.72%), Postives = 247/477 (51.78%), Query Frame = 1
Query: 207 PSLKTCNFLLSSLVKANEFEKC-CEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIEL 266
PSL T + L++ L+K +F C + + + G P+ + +I+ CK G + A+++
Sbjct: 318 PSLITYSVLINGLIKLEKFHDANCVLKEMCNRGFVPNEVVYNTLIDGYCKTGNISEALKI 377
Query: 267 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 326
M G++PN VT N ++ G C++ + D+A ++ +K+ G+ N ++I+ L
Sbjct: 378 RDNMLSNGLTPNSVTLNSLLQGFCRSDQFDHAEQVLDKIISGGLSINQAVCFSVIHWLCM 437
Query: 327 LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 386
+ FD EM+ F P+ + L+ G CK G AL + + K + + T
Sbjct: 438 KSRFDSALKFTTEMLLRNFRPSDSLLTTLVGGLCKDGKHSEALGLWFRLWEKGVAANTAT 497
Query: 387 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 446
+L+ G C+S ++ L+ +L GL + + +++ CK+ + F+ + M
Sbjct: 498 SNALIHGLCESRSMQEVVMLLKPMLERGLVLDRISYNTLILGCCKEGKVEEGFKLKEEMA 557
Query: 447 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLP 506
+ P +L+ GLC GK +A +LW +G + T +I G C AG++
Sbjct: 558 KQGIEPDTYTYNLLMHGLCNMGKVDDAVKLWDECENRGLVPNVYTYGVMIDGYCQAGRMK 617
Query: 507 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 566
E + +++ + + ++ + YN LI +C +G + LR +M K+GIQP TY+ L+
Sbjct: 618 EGENLFSKLVNKEVELNSVVYNTLIRAYCTDGNMTAALGLRCDMKKKGIQPSCGTYSSLI 677
Query: 567 RGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKME 626
GLCN+G ++DA L DE + GL+ N+ Y ++ GYCK +++ V + F E+ S ++
Sbjct: 678 HGLCNIGDVEDAKCLLDEMRKDGLLPNVVCYTALIHGYCKLGQMDKVRSAFLEMSSDNIQ 737
Query: 627 LNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 683
N I Y ++I + + GN+ A +LL M GI P+ TY++L +G C +VE+A
Sbjct: 738 PNKITYTVMIDGYSKLGNMEEATKLLCEMAKMGIAPDAVTYNALTNGFCKERMVEEA 794
HSP 2 Score: 119.8 bits (299), Expect = 1.4e-23
Identity = 79/254 (31.10%), Postives = 127/254 (50.00%), Query Frame = 1
Query: 171 TQAFDLLIHVYSTQFRNLG-FSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCC 230
T ++LL+H N+G AV ++ +G P++ T ++ +A ++
Sbjct: 565 TYTYNLLMHGLC----NMGKVDDAVKLWDECENRGLVPNVYTYGVMIDGYCQAGRMKEGE 624
Query: 231 EVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGL 290
+F +++++ + + +I A C G M A+ L M+K GI P+ TY+ +I+GL
Sbjct: 625 NLFSKLVNKEVELNSVVYNTLIRAYCTDGNMTAALGLRCDMKKKGIQPSCGTYSSLIHGL 684
Query: 291 CQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNV 350
C G +++A L ++M G+ PN+ Y ALI+G KL DKV EM PN
Sbjct: 685 CNIGDVEDAKCLLDEMRKDGLLPNVVCYTALIHGYCKLGQMDKVRSAFLEMSSDNIQPNK 744
Query: 351 VVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 410
+ + +IDGY K+GN+E A K+ M I P +VT +L GFCK +E A
Sbjct: 745 ITYTVMIDGYSKLGNMEEATKLLCEMAKMGIAPDAVTYNALTNGFCKERMVEEAFEVHIL 804
Query: 411 ILSSGLSIHPDNCY 423
IL++ D CY
Sbjct: 805 ILNTADCRPWDTCY 814
HSP 3 Score: 832.0 bits (2148), Expect = 5.4e-238
Identity = 416/706 (58.92%), Postives = 516/706 (73.09%), Query Frame = 1
Query: 8 ISKTTPVLFPFSRRLVCVSSTQPHKEH---HQDPPWQSQDQLHLWVSSVLSHSSLDSSKC 67
+ K TP+ P +R L CV+S PH Q+ P S L V+S+LS+ SLDS++C
Sbjct: 8 LPKPTPIFCPIARPLTCVTSAAPHPPSPLPSQNQPPSSDHALLKSVTSILSNPSLDSTQC 67
Query: 68 SALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKF 127
L+PHLSP QFD +FFS+ NP T LNFFYFAS+S FRFT+ SYC L+ LI S F
Sbjct: 68 KQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGF 127
Query: 128 IPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQ 187
+ PARLLLIRLID LPVL D + HIEIA+A+ L V A DLLIHVY TQ
Sbjct: 128 VSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQ 187
Query: 188 FRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDVF 247
FRN+GF A+ VF LA KG FP++KTC FLLSSLVKANE EK VF M +G PDV+
Sbjct: 188 FRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVY 247
Query: 248 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 307
F+ INA CKGGK+E+AI+LF MEKLG+SPNVVTYN +I+GLC++G LD AF KEKM
Sbjct: 248 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307
Query: 308 TVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNI 367
GV L TY LINGL+KL F++ N VL E + GF PN VV+N LIDGYCKMGN+
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367
Query: 368 EGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSV 427
AL+I+ M+SK I P SVTL S++QGFCK Q+E AE LEE+LS G SI+P ++
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427
Query: 428 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 487
+HWLC R+ SA RF + ML RN RP+D LLT LV GLCK+GKH +A ELWFRLLEKG
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487
Query: 488 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 547
A+ VT+NALIHGLC G + EA R++K+MLERG +D+ITYN LI G C EGKVE F+
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547
Query: 548 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 607
LR EM K+GI+PD +TYN L+ G+C +GKLD+A+ LW+E K+ L+ N++TYG+M++GYC
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607
Query: 608 KANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA 667
KA++IE+ E LF ELL++ +ELNS+VYN +I+A+C+NGN A +L ++M+SKGI P A
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667
Query: 668 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
TYSSLIHG+CNIG +EDAK LIDEMRKEG +PNVVCYTALIGGYCK
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713
BLAST of Csa4G055990 vs. TrEMBL
Match:
D7TFE9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00360 PE=4 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 6.7e-71
Identity = 146/510 (28.63%), Postives = 262/510 (51.37%), Query Frame = 1
Query: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFR-VMSEGACPDVFSFTNVINALCKGGK 259
+ + G +L T + L++ L+K +F + V + + +G P+ + +I+ CK G
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366
Query: 260 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 319
+ +A+ + M GI+PN VT N II G C+ G+++ A + E+M +G N +
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426
Query: 320 LINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 379
+I+ L + F+ L EM+ PN + L+ G CK G A+++ ++ K
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486
Query: 380 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 439
VT +L+ G CK+ ++ A L+++L G + +++ CK+ + F
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546
Query: 440 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 499
+ M+ + P +L+ G+C+ GK EA LW + + T +I G
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606
Query: 500 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 559
C A K+ E ++ E+L + L ++ + YN LI +C G F+L ++M +GI P
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666
Query: 560 YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNE 619
TY+ L+ G+CN+G+++DA L DE + GL+ N+ Y ++ GYCK +++ V N+ E
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726
Query: 620 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 679
+ S + N I Y ++I + ++G++ A +LL M KGI+P+ TY+ L +G C G
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786
Query: 680 VEDAKHLIDEMRKEGFVPNVVCYTALIGGY 709
+E+ + D M +EG + + YT L+ G+
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
HSP 2 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 66/268 (24.63%), Postives = 113/268 (42.16%), Query Frame = 1
Query: 101 NSFKFRFTIHSYCTLILL--------LIRSKFIPPARLLLIRLIDGNLPVLNLDS-EKFH 160
++F + IH C + L +S+ + P +IDG ++ EK
Sbjct: 560 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 619
Query: 161 IEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKT 220
E+ L SVV ++ LI Y RN A + + KG P+ T
Sbjct: 620 TELLTQNLELNSVV--------YNTLIRAYC---RNGNTVEAFKLHDDMRSKGIPPTTAT 679
Query: 221 CNFLLSSLVKANEFEKC-CEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKME 280
+ L+ + E C + + EG P+V +T +I CK G+M+ + + +M
Sbjct: 680 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 739
Query: 281 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 340
I PN +TY +I+G ++G + A +L +M KG+ P+ TY L NG K +
Sbjct: 740 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 799
Query: 341 KVNHVLDEMIGSGFNPNVVVFNNLIDGY 359
+ + D M G + + + L+ G+
Sbjct: 800 EGFKICDYMSQEGLPLDEITYTTLVHGW 816
HSP 3 Score: 826.6 bits (2134), Expect = 2.3e-236
Identity = 430/719 (59.81%), Postives = 521/719 (72.46%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVSST-QPHKEHH------QDPPWQSQDQLHL-WVSS 60
M L R I K + SR L V+ST Q +E H Q PP QS +Q L WVSS
Sbjct: 1 MDLRRLSIPKPCSLSIAVSRPLTHVTSTAQQQQELHNRNQQQQPPPPQSSNQSLLKWVSS 60
Query: 61 VLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSY 120
VLS SLD SKC LP+LSP +FD LFFSI NP T L FFYFAS S FRFT+ SY
Sbjct: 61 VLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKTALKFFYFASQSCNFRFTVRSY 120
Query: 121 CTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKF-HIEIANALFGLTSVVGRFEWT 180
C LI LL+ S + PARLLLIRLIDG +PVL + HIEIA+ + L
Sbjct: 121 CLLIRLLLFSNLLSPARLLLIRLIDGKMPVLYASNPSIRHIEIASQMVDLNVTSEPALGV 180
Query: 181 QAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEV 240
Q DLL+HVY TQF+NLGF A+DVF + + KG FPSLKTCNFLL+SLVKANE +K EV
Sbjct: 181 QIADLLVHVYCTQFKNLGFGYAIDVFSIFSSKGIFPSLKTCNFLLNSLVKANEVQKGIEV 240
Query: 241 FRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN 300
F M G PDVF F+ INA CK G++E+AI LF KME+LGI+PNVVTYN II+GLC+N
Sbjct: 241 FETMCRGVSPDVFLFSTAINAFCKRGRIEDAIGLFTKMEELGIAPNVVTYNNIIHGLCRN 300
Query: 301 GRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVF 360
GRL AF LKEKM ++ V+P+L TY LINGLIKL FD N VL EM GF PN VV+
Sbjct: 301 GRLYEAFHLKEKMVLREVEPSLITYSILINGLIKLEKFDDANFVLKEMSVRGFVPNYVVY 360
Query: 361 NNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILS 420
N LIDGYCK GNI ALKI+D M+SK ++P SVT SL+ GFCKS Q+++AENALEE+LS
Sbjct: 361 NTLIDGYCKKGNISEALKIRDDMVSKGMSPNSVTFNSLIHGFCKSGQMDNAENALEEMLS 420
Query: 421 SGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE 480
GLSI+ SV+ WLC R++SA FTK ML RN RP D LLT+LV GLCK+GK E
Sbjct: 421 RGLSINQGAYTSVIKWLCINSRFNSALHFTKEMLLRNLRPGDGLLTLLVSGLCKNGKQAE 480
Query: 481 ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL 540
ATEL FRL EKG + VTSNALIHG+C AG L EA +++ EML+RGL +D++TYN LIL
Sbjct: 481 ATELCFRLFEKGFTVNTVTSNALIHGMCEAGNLKEAGKLLMEMLQRGLILDKVTYNTLIL 540
Query: 541 GFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLIS 600
G C +GK E F+L+E+M KRGIQPD YTYN LL GLC++GK+++AI+LW+E K +
Sbjct: 541 GCCKDGKPEEGFKLKEDMIKRGIQPDNYTYNLLLHGLCSLGKMEEAIELWEECKRTVFGP 600
Query: 601 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL 660
+I+TYG+M++G+CKA++IE+ E LFNE++SKKMELN +VYN +I+A+C+ GN AA +L
Sbjct: 601 DIYTYGVMIDGFCKADKIEEGETLFNEMISKKMELNPVVYNTLIRAYCKIGNTTAAFRLS 660
Query: 661 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
+MKS+GILP TYSSLIHG+CNIGL+EDAK L DEMRKEG +PNV CYTALIGGYCK
Sbjct: 661 NDMKSRGILPTSVTYSSLIHGLCNIGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCK 719
BLAST of Csa4G055990 vs. TrEMBL
Match:
A0A067E580_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003295mg PE=4 SV=1)
HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 160/503 (31.81%), Postives = 260/503 (51.69%), Query Frame = 1
Query: 207 PSLKTCNFLLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGKMENAIEL 266
PSL T + L++ L+K +F+ V + MS G P+ + +I+ CK G + A+++
Sbjct: 320 PSLITYSILINGLIKLEKFDDANFVLKEMSVRGFVPNYVVYNTLIDGYCKKGNISEALKI 379
Query: 267 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 326
M G+SPN VT+N +I+G C++G++DNA E+M +G+ N Y ++I L
Sbjct: 380 RDDMVSKGMSPNSVTFNSLIHGFCKSGQMDNAENALEEMLSRGLSINQGAYTSVIKWLCI 439
Query: 327 LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 386
+ F+ H EM+ P + L+ G CK G A ++ + K T +VT
Sbjct: 440 NSRFNSALHFTKEMLLRNLRPGDGLLTLLVSGLCKNGKQAEATELCFRLFEKGFTVNTVT 499
Query: 387 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 446
+L+ G C++ ++ A L E+L GL + +++ CK + F+ + M+
Sbjct: 500 SNALIHGMCEAGNLKEAGKLLMEMLQRGLILDKVTYNTLILGCCKDGKPEEGFKLKEDMI 559
Query: 447 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLP 506
R +P + +L+ GLC GK EA ELW T +I G C A K+
Sbjct: 560 KRGIQPDNYTYNLLLHGLCSLGKMEEAIELWEECKRTVFGPDIYTYGVMIDGFCKADKIE 619
Query: 507 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 566
E + EM+ + + ++ + YN LI +C G FRL +M RGI P TY+ L+
Sbjct: 620 EGETLFNEMISKKMELNPVVYNTLIRAYCKIGNTTAAFRLSNDMKSRGILPTSVTYSSLI 679
Query: 567 RGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKME 626
GLCN+G ++DA L+DE + GL+ N+ Y ++ GYCK ++++ E++ E+ S +
Sbjct: 680 HGLCNIGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIH 739
Query: 627 LNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHL 686
N I Y I+I +C+ G++ A +LL M KGI P+ TY+ + G C G VE+A +
Sbjct: 740 PNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSITYNVFMDGHCKGGNVEEAFKV 799
Query: 687 IDEMRKEGFVPNVVCYTALIGGY 709
D M EG + + YT LI G+
Sbjct: 800 CDRMLSEGLSLDEITYTTLIDGW 822
HSP 2 Score: 826.2 bits (2133), Expect = 3.0e-236
Identity = 430/719 (59.81%), Postives = 520/719 (72.32%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVSST-QPHKEHH------QDPPWQSQDQLHL-WVSS 60
M L R I K + SR L V+ST Q +E H Q PP QS +Q L WVSS
Sbjct: 1 MDLRRLSIPKPCSLSIAVSRPLTHVTSTAQQQQELHNRNQQQQPPPPQSSNQSLLKWVSS 60
Query: 61 VLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSY 120
VLS SLD SKC LP+LSP +FD LFFSI NP T L FFYFAS S FRFT+ SY
Sbjct: 61 VLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKTALKFFYFASQSCNFRFTVRSY 120
Query: 121 CTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKF-HIEIANALFGLTSVVGRFEWT 180
C LI LL+ S + PARLLLIRLIDG +PVL + HIEIA+ + L
Sbjct: 121 CLLIRLLLFSNLLSPARLLLIRLIDGKMPVLYASNPSIRHIEIASQMVDLNVTSEPALGV 180
Query: 181 QAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEV 240
Q DLL+HVY TQF+NLGF A+DVF + + KG FPSLKTCNFLL+SLVKANE +K EV
Sbjct: 181 QIADLLVHVYCTQFKNLGFGYAIDVFSIFSNKGIFPSLKTCNFLLNSLVKANEVQKGIEV 240
Query: 241 FRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN 300
F M G PDVF F+ INA CK G++E+AI LF KME+LGI+PNVVTYN II+GLC+N
Sbjct: 241 FETMCRGVSPDVFLFSTAINAFCKRGRIEDAIGLFTKMEELGIAPNVVTYNNIIHGLCRN 300
Query: 301 GRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVF 360
GRL AF LKEKM ++ V+P+L TY LINGLIKL FD N VL EM GF PN VV+
Sbjct: 301 GRLYEAFHLKEKMVLREVEPSLITYSILINGLIKLEKFDDANFVLKEMSVRGFVPNYVVY 360
Query: 361 NNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILS 420
N LIDGYCK GNI ALKI+D M+SK ++P SVT SL+ GFCKS Q+++AENALEE+LS
Sbjct: 361 NTLIDGYCKKGNISEALKIRDDMVSKGMSPNSVTFNSLIHGFCKSGQMDNAENALEEMLS 420
Query: 421 SGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE 480
GLSI+ SV+ WLC R+ SA FTK ML RN RP D LLT+LV GLCK+GK E
Sbjct: 421 RGLSINQGAYTSVIKWLCINSRFDSALHFTKEMLLRNLRPGDGLLTLLVSGLCKNGKQAE 480
Query: 481 ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL 540
ATEL FRL EKG + VTSNALIHG+C AG L EA +++ EML+RGL +D++TYN LIL
Sbjct: 481 ATELCFRLFEKGFTVNTVTSNALIHGMCEAGNLKEAGKLLMEMLQRGLILDKVTYNTLIL 540
Query: 541 GFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLIS 600
G C +GK E F+L+E+M KRGIQPD YTYN LL GLC++GK+++AI+LW+E K +
Sbjct: 541 GCCKDGKPEEGFKLKEDMIKRGIQPDNYTYNLLLHGLCSLGKMEEAIELWEECKRTVFGP 600
Query: 601 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL 660
+I+TYG+M++G+CKA++IE+ E LFNE++SKKMELN +VYN +I+A+C+ GN AA +L
Sbjct: 601 DIYTYGVMIDGFCKADKIEEGETLFNEMISKKMELNPVVYNTLIRAYCKIGNTTAAFRLS 660
Query: 661 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
+MKS+GILP TYSSLIHG+CNIGL+EDAK L DEMRKEG +PNV CYTALIGGYCK
Sbjct: 661 NDMKSRGILPTSVTYSSLIHGLCNIGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCK 719
BLAST of Csa4G055990 vs. TAIR10
Match:
AT4G19440.1 (AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 642.5 bits (1656), Expect = 3.1e-184
Identity = 328/669 (49.03%), Postives = 449/669 (67.12%), Query Frame = 1
Query: 42 SQDQLHLWVSSVLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASN 101
S LH +SSVLS SLD +C L+ LSP +FD+LF K NP T L+FF AS+
Sbjct: 59 SDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASD 118
Query: 102 SFKFRFTIHSYCTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGL 161
SF F F++ SYC LI LL+ + + AR++LIRLI+GN+PVL + IA+A+ L
Sbjct: 119 SFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASL 178
Query: 162 TSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVK 221
+ + DLLI VY TQF+ G A+DVF +LA KG FPS TCN LL+SLV+
Sbjct: 179 SLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVR 238
Query: 222 ANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTY 281
ANEF+KCCE F V+ +G PDV+ FT INA CKGGK+E A++LF KME+ G++PNVVT+
Sbjct: 239 ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 298
Query: 282 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIG 341
N +I+GL GR D AF KEKM +G++P L TY L+ GL + VL EM
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358
Query: 342 SGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEH 401
GF PNV+V+NNLID + + G++ A++IKD+M+SK ++ TS T +L++G+CK+ Q ++
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 402 AENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVC 461
AE L+E+LS G +++ + SV+ LC + SA RF ML RN P LLT L+
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 462 GLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPM 521
GLCK GKH +A ELWF+ L KG TSNAL+HGLC AGKL EA RI KE+L RG M
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 522 DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLW 581
DR++YN LI G C + K++ F +EM KRG++PD YTY+ L+ GL N+ K+++AI+ W
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 582 DEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQN 641
D+ K +G++ +++TY +M++G CKA R E+ + F+E++SK ++ N++VYN +I+A+C++
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 642 GNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCY 701
G ++ AL+L E+MK KGI PN ATY+SLI G+ I VE+AK L +EMR EG PNV Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 702 TALIGGYCK 711
TALI GY K
Sbjct: 719 TALIDGYGK 727
HSP 2 Score: 244.6 bits (623), Expect = 1.9e-64
Identity = 153/535 (28.60%), Postives = 256/535 (47.85%), Query Frame = 1
Query: 181 YSTQFRNLGFSCAVDVFYLLARK----GTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS 240
++T LG D ++ K G P+L T + L+ L +A V + M+
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 241 E-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLD 300
+ G P+V + N+I++ + G + AIE+ M G+S TYN +I G C+NG+ D
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 301 NAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLI 360
NA L ++M G N ++ ++I L FD + EM+ +P + LI
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 361 DGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLS 420
G CK G AL++ ++K + T +L+ G C++ +++ A +EIL G
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 421 IHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 480
+ + +++ C K + AF F M+ R +P + ++L+CGL K EA +
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 481 WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCN 540
W G T + +I G C A + E EM+ + + + + YN LI +C
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 541 EGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHT 600
G++ LRE+M +GI P+ TY L++G+ + ++++A L++E + GL N+
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 601 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 660
Y +++GY K ++ VE L E+ SK + N I Y ++I + ++GNV A +LL M+
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 661 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
KGI+P+ TY I+G G V +A DE Y A+I G+ K
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN----------YAAIIEGWNK 822
BLAST of Csa4G055990 vs. TAIR10
Match:
AT1G62670.1 (AT1G62670.1 rna processing factor 2)
HSP 1 Score: 285.8 bits (730), Expect = 7.3e-77
Identity = 159/514 (30.93%), Postives = 271/514 (52.72%), Query Frame = 1
Query: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVIN 252
AV +F + + FPS+ + LLS++ K N+F+ + M P + ++++ +IN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 253 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 312
C+ ++ A+ + KM KLG PN+VT + ++NG C + R+ A L ++M V G QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 313 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 372
N T+ LI+GL N + ++D M+ G P++V + +++G CK G+ + A +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 373 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 432
+ M + P + +++ G CK ++ A N +E+ + G+ + S++ LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 433 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 492
R+ A R M+ R P + L+ K+GK +EA +L+ ++++ S VT
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 493 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 552
++LI+G C +L EA ++ + M+ + D +TYN LI GFC +VE + EM++
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 553 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 612
RG+ + TYN L++GL G D A +++ E + G+ NI TY +++G CK ++E
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 613 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 672
+F L KME YNI+I+ C+ G V L N+ KG+ P+ Y+++I
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 673 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 706
G C G E+A L EM+++G +PN CY LI
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
HSP 2 Score: 199.1 bits (505), Expect = 9.0e-51
Identity = 143/500 (28.60%), Postives = 240/500 (48.00%), Query Frame = 1
Query: 110 HSYCTLILLLIRSKFIPPARLLLIRLID-GNLP-------VLNLDSEKFHIEIANALFGL 169
++Y LI R +P A +L +++ G P +LN I A AL
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 170 TSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVK 229
V G T F+ LIH F + S A+ + + KG P L T +++ L K
Sbjct: 177 MFVTGYQPNTVTFNTLIHGL---FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 236
Query: 230 ANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVT 289
+ + + M +G P V + +I+ LCK M++A+ LF +ME GI PNVVT
Sbjct: 237 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 296
Query: 290 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI 349
Y+ +I+ LC GR +A L M + + P++ T+ ALI+ +K + + DEM+
Sbjct: 297 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 356
Query: 350 GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 409
+P++V +++LI+G+C ++ A ++ + M+SK+ P VT +L++GFCK ++E
Sbjct: 357 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 416
Query: 410 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 469
E+ GL + ++ L + A K M+S P+ + L+
Sbjct: 417 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 476
Query: 470 CGLCKDGKHLEATELWFRLLEKGSPASKV-TSNALIHGLCGAGKLPEASRIVKEMLERGL 529
GLCK+GK LE + F L++ + T N +I G+C AGK+ + + + +G+
Sbjct: 477 DGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 536
Query: 530 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 589
D + YN +I GFC +G E L +EM + G P+ YN L+R G + + +
Sbjct: 537 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 596
Query: 590 LWDEFKASGLISNIHTYGIM 600
L E ++ G + T G++
Sbjct: 597 LIKEMRSCGFAGDASTIGLV 612
BLAST of Csa4G055990 vs. TAIR10
Match:
AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 282.7 bits (722), Expect = 6.2e-76
Identity = 188/645 (29.15%), Postives = 314/645 (48.68%), Query Frame = 1
Query: 66 ALLPHLSPSQFDQLFFSI-GLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKF 125
+L P+ + D L + + +K + L+FF +A + + + S C +I L + SK
Sbjct: 77 SLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNLESLCIVIHLAVASKD 136
Query: 126 IPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYST- 185
+ A+ L+ + P LN+ + Q FDLL++ Y
Sbjct: 137 LKVAQSLISSFWER--PKLNVTDS---------------------FVQFFDLLVYTYKDW 196
Query: 186 ----QFRNLGFSCAVD---------VFYLLARKGTFPSLKTCNFLLSSLVK-ANEFEKCC 245
+ ++ F VD VF + G S+ +CN L+ L K +
Sbjct: 197 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 256
Query: 246 EVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGL 305
VFR E G C +V S+ VI+ +C+ G+++ A L + ME G +P+V++Y+ ++NG
Sbjct: 257 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 316
Query: 306 CQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNV 365
C+ G LD ++L E M KG++PN YG++I L ++ + EMI G P+
Sbjct: 317 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 376
Query: 366 VVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 425
VV+ LIDG+CK G+I A K M S++ITP +T +++ GFC+ + A E
Sbjct: 377 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 436
Query: 426 ILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK 485
+ GL +++ CK AFR M+ P+ + T L+ GLCK+G
Sbjct: 437 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 496
Query: 486 HLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNA 545
A EL + + G + T N++++GLC +G + EA ++V E GL D +TY
Sbjct: 497 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 556
Query: 546 LILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASG 605
L+ +C G+++ + +EM +G+QP I T+N L+ G C G L+D KL + A G
Sbjct: 557 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 616
Query: 606 LISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAAL 665
+ N T+ +++ YC N ++ ++ ++ S+ + + Y ++K HC+ N+ A
Sbjct: 617 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 676
Query: 666 QLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 694
L + MK KG + +TYS LI G +A+ + D+MR+EG
Sbjct: 677 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
BLAST of Csa4G055990 vs. TAIR10
Match:
AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 280.0 bits (715), Expect = 4.0e-75
Identity = 204/753 (27.09%), Postives = 349/753 (46.35%), Query Frame = 1
Query: 7 KISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLDSSKCSA 66
K S V P +RR C S P + + S H +S + + S +
Sbjct: 26 KFSTDVTVPSPVTRRQFC--SVSPLLRNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKS 85
Query: 67 LLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIP 126
++ +SPS LF L +P T LNF ++ S + +++ +++SY +L+ LLI + ++
Sbjct: 86 MVSAISPSHVSSLF---SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 145
Query: 127 PA---RLLLIRLIDG---NLPVLNL-----DSEKFHIE----------IANAL--FGLTS 186
RLL+I+ D L VL+L E+F ++ + N+L FGL
Sbjct: 146 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVD 205
Query: 187 VVGRFEWTQAFDLLIHVYSTQFRNLGFSC-------AVDVFYLLARKGTFPSLKTCNFLL 246
+ + D + T + + C A + G P T L+
Sbjct: 206 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 265
Query: 247 SSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKMENAIELFMKMEKLGIS 306
+ + + +VF M C + ++T++I+ LC +++ A++LF+KM+
Sbjct: 266 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 325
Query: 307 PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHV 366
P V TY +I LC + R A L ++M G++PN+ TY LI+ L F+K +
Sbjct: 326 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 385
Query: 367 LDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 426
L +M+ G PNV+ +N LI+GYCK G IE A+ + ++M S+ ++P + T L++G+CK
Sbjct: 386 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 445
Query: 427 SDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLL 486
S+ + A L ++L + S++ C+ + SA+R +M R P
Sbjct: 446 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 505
Query: 487 LTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML 546
T ++ LCK + EA +L+ L +KG + V ALI G C AGK+ EA ++++ML
Sbjct: 506 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 565
Query: 547 ERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD 606
+ + +T+NALI G C +GK++ L E+M K G+QP + T L+ L G D
Sbjct: 566 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 625
Query: 607 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 666
A + + +SG + HTY ++ YC+ R+ D E++ ++ + + Y+ +I
Sbjct: 626 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 685
Query: 667 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH------------------GVCNIG 711
K + G A +L+ M+ G P+ T+ SLI + N+
Sbjct: 686 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 745
HSP 2 Score: 195.7 bits (496), Expect = 9.9e-50
Identity = 130/538 (24.16%), Postives = 253/538 (47.03%), Query Frame = 1
Query: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 252
A+++ + G P++ T L+ SL +FEK E+ +++ +G P+V ++ +IN
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 253 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 312
CK G +E+A+++ ME +SPN TYN +I G C++ + A + KM + V P
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLP 461
Query: 313 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 372
++ TY +LI+G + FD +L M G P+ + ++ID CK +E A +
Sbjct: 462 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 521
Query: 373 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 432
D + K + P V +L+ G+CK+ +++ A LE++LS + +++H LC
Sbjct: 522 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 581
Query: 433 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 492
+ A + M+ +P+ T+L+ L KDG A + ++L G+ T
Sbjct: 582 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 641
Query: 493 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 552
I C G+L +A ++ +M E G+ D TY++LI G+ + G+ F + + M
Sbjct: 642 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 701
Query: 553 RGIQPDIYTYNFLLR------------------GLCNVGKLDDAIKLWDEFKASGLISNI 612
G +P +T+ L++ + N+ + D ++L ++ + N
Sbjct: 702 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 761
Query: 613 HTYGIMMEGYCKANRIEDVENLFNEL-LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 672
+Y ++ G C+ + E +F+ + ++ + + +V+N ++ C+ A ++++
Sbjct: 762 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 821
Query: 673 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
+M G LP + LI G+ G E + + + G+ + + + +I G K
Sbjct: 822 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
HSP 3 Score: 108.6 bits (270), Expect = 1.6e-23
Identity = 75/335 (22.39%), Postives = 155/335 (46.27%), Query Frame = 1
Query: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCKGGK 259
+ + G P++ T L+ L+K +F+ F+ M S G PD ++T I C+ G+
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 260 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 319
+ +A ++ KM + G+SP++ TY+ +I G G+ + AF++ ++M G +P+ T+ +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 320 LINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 379
LI L+++ + + G P + +N+++ + +++ + M+ +
Sbjct: 713 LIKHLLEMKYGKQ----------KGSEPELCAMSNMME-------FDTVVELLEKMVEHS 772
Query: 380 ITPTSVTLYSLMQGFCKSDQIEHAENALEEI-LSSGLSIHPDNCYSVVHWLCKKFRYHSA 439
+TP + + L+ G C+ + AE + + + G+S +++ CK +++ A
Sbjct: 773 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 832
Query: 440 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 499
+ M+ P +L+CGL K G+ T ++ LL+ G ++ +I G
Sbjct: 833 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 892
Query: 500 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 533
+ G + + M + G TY+ LI G
Sbjct: 893 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
BLAST of Csa4G055990 vs. TAIR10
Match:
AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 273.9 bits (699), Expect = 2.9e-73
Identity = 157/514 (30.54%), Postives = 266/514 (51.75%), Query Frame = 1
Query: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 252
AVD+F + + PS+ N LLS++ K N+F+ + R+ + D++S+ +IN
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 253 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 312
C+ ++ A+ + KM KLG P++VT + ++NG C R+ A L ++M V QP
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 313 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 372
N T+ LI+GL N + ++D M+ G P++ + +++G CK G+I+ AL +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 373 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 432
M I V +++ C + A N E+ + G+ + S++ LC
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 433 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 492
R+ A R M+ R P+ + + L+ K+GK +EA +L+ ++++ T
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 493 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 552
++LI+G C +L EA + + M+ + + +TYN LI GFC +VE L EM++
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 553 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 612
RG+ + TYN L++GL G D A K++ + + G+ +I TY I+++G CK ++E
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 613 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 672
+F L KME + YNI+I+ C+ G V L ++ KG+ PN Y+++I
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 673 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 706
G C GL E+A L EM+++G +PN Y LI
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
HSP 2 Score: 238.8 bits (608), Expect = 1.0e-62
Identity = 167/604 (27.65%), Postives = 288/604 (47.68%), Query Frame = 1
Query: 86 KANPMTCLNFFYFASNSFKFRFTIHSYCTLILLL----------IRSKFIPPA---RLLL 145
KA+P+ L YF++ S+ +R + L L L ++S+ +P LL
Sbjct: 28 KASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLL 87
Query: 146 IRLIDGNL--PVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGF 205
+ N V++L ++ I+ L+ ++++LI+ + R
Sbjct: 88 SAIAKMNKFDLVISLGERMQNLRISYDLY-------------SYNILINCFC---RRSQL 147
Query: 206 SCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEF-EKCCEVFRVMSEGACPDVFSFTNV 265
A+ V + + G P + T + LL+ E V ++ P+ +F +
Sbjct: 148 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 207
Query: 266 INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 325
I+ L K A+ L +M G P++ TY ++NGLC+ G +D A L +KM +
Sbjct: 208 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 267
Query: 326 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALK 385
+ ++ Y +I+ L + ++ EM G PNVV +N+LI C G A +
Sbjct: 268 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 327
Query: 386 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD--NCYSVVHW 445
+ MI + I P VT +L+ F K ++ AE +E++ SI PD S+++
Sbjct: 328 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLING 387
Query: 446 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 505
C R A ++M+S++ P+ + L+ G CK + E EL+ + ++G +
Sbjct: 388 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 447
Query: 506 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 565
VT N LI GL AG A +I K+M+ G+P D ITY+ L+ G C GK+E + E
Sbjct: 448 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 507
Query: 566 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 625
+ K ++PDIYTYN ++ G+C GK++D L+ G+ N+ Y M+ G+C+
Sbjct: 508 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 567
Query: 626 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 672
E+ + LF E+ NS YN +I+A ++G+ AA+ +L++ M+S G + + +T S
Sbjct: 568 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 613
BLAST of Csa4G055990 vs. NCBI nr
Match:
gi|449462543|ref|XP_004149000.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic [Cucumis sativus])
HSP 1 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD
Sbjct: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
Query: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI
Sbjct: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
Query: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC
Sbjct: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
Query: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
Query: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK
Sbjct: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
Query: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN
Sbjct: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
Query: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
Query: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
Query: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
Query: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL
Sbjct: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
Query: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK
Sbjct: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
BLAST of Csa4G055990 vs. NCBI nr
Match:
gi|449462543|ref|XP_004149000.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic [Cucumis sativus])
HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 141/507 (27.81%), Postives = 256/507 (50.49%), Query Frame = 1
Query: 203 KGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMEN 262
KG P+LKT L++ L+K N F+K V ++ G P+V F N+I+ CK G +E
Sbjct: 307 KGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEG 366
Query: 263 AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALIN 322
A+++ M I+P VT ++ G C++ ++++A E++ G+ + ++++
Sbjct: 367 ALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVH 426
Query: 323 GLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITP 382
L K + M+ F P+ ++ L+ G CK G A ++ ++ K
Sbjct: 427 WLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA 486
Query: 383 TSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFT 442
+ VT +L+ G C + ++ A ++E+L GL + +++ C + + FR
Sbjct: 487 SKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLR 546
Query: 443 KMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGA 502
+ M R +P L+ GLC GK +A +LW G ++ T ++ G C A
Sbjct: 547 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 606
Query: 503 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTY 562
++ + + E+L + + ++ I YN +I C G V +L E M +GI P+ TY
Sbjct: 607 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY 666
Query: 563 NFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 622
+ L+ G+CN+G ++DA L DE + G + N+ Y ++ GYCK +++ E+ + E++S
Sbjct: 667 SSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726
Query: 623 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 682
+ N Y ++I +C+ GN+ A LL MK GI+P+ TY+ L +G C +++
Sbjct: 727 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 786
Query: 683 AKHLIDEMRKEGFVPNVVCYTALIGGY 709
A + D+M EG + + YT L+ G+
Sbjct: 787 AFKVCDQMATEGLPVDEITYTTLVHGW 813
HSP 2 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD
Sbjct: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
Query: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI
Sbjct: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
Query: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC
Sbjct: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
Query: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
Query: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK
Sbjct: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
Query: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN
Sbjct: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
Query: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
Query: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
Query: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
Query: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL
Sbjct: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
Query: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK
Sbjct: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
BLAST of Csa4G055990 vs. NCBI nr
Match:
gi|659102008|ref|XP_008451904.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 1358.6 bits (3515), Expect = 0.0e+00
Identity = 658/710 (92.68%), Postives = 686/710 (96.62%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLD 60
MHLTRFKI+KT PVLFPFSRRL CVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLS+SSLD
Sbjct: 1 MHLTRFKINKTIPVLFPFSRRLACVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSNSSLD 60
Query: 61 SSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLI 120
SSKCSALLPHLSP QFDQLFFSIGLKANPMTCLNFFYFAS+SFKFRFTIHSYC LILLL+
Sbjct: 61 SSKCSALLPHLSPFQFDQLFFSIGLKANPMTCLNFFYFASDSFKFRFTIHSYCILILLLV 120
Query: 121 RSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
SKF+PPARLLLIRLIDGNLPVLN D +KFHIEIANALFGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGNLPVLNSDFKKFHIEIANALFGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC 240
YSTQFRNLGF CA+DVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF+VMSEG C
Sbjct: 181 YSTQFRNLGFGCAIDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFQVMSEGVC 240
Query: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
PDVFSFTNVINALCKGGKME A ELFMKMEKLGISPNVVTYNCIINGLCQNGRLD+AFEL
Sbjct: 241 PDVFSFTNVINALCKGGKMEKATELFMKMEKLGISPNVVTYNCIINGLCQNGRLDHAFEL 300
Query: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
KEKMT++GVQPNLKTYGAL+NGLIKL FDKVNH+LDEMIG+GF PNVVVFNNLIDGYCK
Sbjct: 301 KEKMTIEGVQPNLKTYGALVNGLIKLKCFDKVNHILDEMIGAGFYPNVVVFNNLIDGYCK 360
Query: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
MGNI+ AL+IKDVMISKNITPTSVTLY+L+QGFCKSDQIE AENALEEILS+GLSIHPD
Sbjct: 361 MGNIKEALRIKDVMISKNITPTSVTLYTLLQGFCKSDQIEQAENALEEILSNGLSIHPDK 420
Query: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480
CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSD LLT+LVCGLCKDGKHLEATELWFRLL
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDPLLTILVCGLCKDGKHLEATELWFRLL 480
Query: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540
EKGSPASKVTSNALIHGLC AG LPEASRIVKEMLERGLP+DRITYNALILGFC EGKVE
Sbjct: 481 EKGSPASKVTSNALIHGLCEAGNLPEASRIVKEMLERGLPLDRITYNALILGFCKEGKVE 540
Query: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
GCFRL+EEMTKRGIQPDIYTYNFLLRGLCN GKLDDAIKLWDEFKASG ISN+HTYG+MM
Sbjct: 541 GCFRLKEEMTKRGIQPDIYTYNFLLRGLCNAGKLDDAIKLWDEFKASGPISNVHTYGVMM 600
Query: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660
+GYCKANRIEDVENLFNELLSKKMELNSIVYNIII+AHCQNGNVAAALQL ENMKSKGIL
Sbjct: 601 DGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIRAHCQNGNVAAALQLRENMKSKGIL 660
Query: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
PNCATYSSLIHG+C+IGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK
Sbjct: 661 PNCATYSSLIHGMCDIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
BLAST of Csa4G055990 vs. NCBI nr
Match:
gi|659102008|ref|XP_008451904.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 254.6 bits (649), Expect = 5.1e-64
Identity = 138/507 (27.22%), Postives = 254/507 (50.10%), Query Frame = 1
Query: 203 KGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMEN 262
+G P+LKT L++ L+K F+K + ++ G P+V F N+I+ CK G ++
Sbjct: 307 EGVQPNLKTYGALVNGLIKLKCFDKVNHILDEMIGAGFYPNVVVFNNLIDGYCKMGNIKE 366
Query: 263 AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALIN 322
A+ + M I+P VT ++ G C++ +++ A E++ G+ + ++++
Sbjct: 367 ALRIKDVMISKNITPTSVTLYTLLQGFCKSDQIEQAENALEEILSNGLSIHPDKCYSVVH 426
Query: 323 GLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITP 382
L K + M+ F P+ + L+ G CK G A ++ ++ K
Sbjct: 427 WLCKKFRYHSAFRFTKMMLSRNFRPSDPLLTILVCGLCKDGKHLEATELWFRLLEKGSPA 486
Query: 383 TSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFT 442
+ VT +L+ G C++ + A ++E+L GL + +++ CK+ + FR
Sbjct: 487 SKVTSNALIHGLCEAGNLPEASRIVKEMLERGLPLDRITYNALILGFCKEGKVEGCFRLK 546
Query: 443 KMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGA 502
+ M R +P L+ GLC GK +A +LW G ++ T ++ G C A
Sbjct: 547 EEMTKRGIQPDIYTYNFLLRGLCNAGKLDDAIKLWDEFKASGPISNVHTYGVMMDGYCKA 606
Query: 503 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTY 562
++ + + E+L + + ++ I YN +I C G V +LRE M +GI P+ TY
Sbjct: 607 NRIEDVENLFNELLSKKMELNSIVYNIIIRAHCQNGNVAAALQLRENMKSKGILPNCATY 666
Query: 563 NFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 622
+ L+ G+C++G ++DA L DE + G + N+ Y ++ GYCK +++ E+ + E++S
Sbjct: 667 SSLIHGMCDIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726
Query: 623 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 682
+ N Y ++I +C+ GN+ A LL MK GI+P+ TY+ L +G C +++
Sbjct: 727 FNIHPNKFTYTVMIDGYCKLGNMEKAYNLLTKMKESGIVPDVVTYNVLTNGFCKANDMDN 786
Query: 683 AKHLIDEMRKEGFVPNVVCYTALIGGY 709
A + D+M EG + + YT L+ G+
Sbjct: 787 AFKVCDQMATEGLSVDEITYTTLVHGW 813
HSP 2 Score: 1052.4 bits (2720), Expect = 3.6e-304
Identity = 508/547 (92.87%), Postives = 530/547 (96.89%), Query Frame = 1
Query: 164 VVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKAN 223
VVGRFEWTQAFDLLIHVYSTQFRNLGF CA+DVFYLLARKGTFPSLKTCNFLLSSLVKAN
Sbjct: 11 VVGRFEWTQAFDLLIHVYSTQFRNLGFGCAIDVFYLLARKGTFPSLKTCNFLLSSLVKAN 70
Query: 224 EFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNC 283
EFEKCCEVF+VMSEG CPDVFSFTNVINALCKGGKME A ELFMKMEKLGISPNVVTYNC
Sbjct: 71 EFEKCCEVFQVMSEGVCPDVFSFTNVINALCKGGKMEKATELFMKMEKLGISPNVVTYNC 130
Query: 284 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSG 343
IINGLCQNGRLD+AFELKEKMT++GVQPNLKTYGAL+NGLIKL FDKVNH+LDEMIG+G
Sbjct: 131 IINGLCQNGRLDHAFELKEKMTIEGVQPNLKTYGALVNGLIKLKCFDKVNHILDEMIGAG 190
Query: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403
F PNVVVFNNLIDGYCKMGNI+ AL+IKDVMISKNITPTSVTLY+L+QGFCKSDQIE AE
Sbjct: 191 FYPNVVVFNNLIDGYCKMGNIKEALRIKDVMISKNITPTSVTLYTLLQGFCKSDQIEQAE 250
Query: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 463
NALEEILS+GLSIHPD CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSD LLT+LVCGL
Sbjct: 251 NALEEILSNGLSIHPDKCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDPLLTILVCGL 310
Query: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 523
CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLC AG LPEASRIVKEMLERGLP+DR
Sbjct: 311 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCEAGNLPEASRIVKEMLERGLPLDR 370
Query: 524 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 583
ITYNALILGFC EGKVEGCFRL+EEMTKRGIQPDIYTYNFLLRGLCN GKLDDAIKLWDE
Sbjct: 371 ITYNALILGFCKEGKVEGCFRLKEEMTKRGIQPDIYTYNFLLRGLCNAGKLDDAIKLWDE 430
Query: 584 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 643
FKASG ISN+HTYG+MM+GYCKANRIEDVENLFNELLSKKMELNSIVYNIII+AHCQNGN
Sbjct: 431 FKASGPISNVHTYGVMMDGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIRAHCQNGN 490
Query: 644 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 703
VAAALQL ENMKSKGILPNCATYSSLIHG+C+IGLVEDAKHLIDEMRKEGFVPNVVCYTA
Sbjct: 491 VAAALQLRENMKSKGILPNCATYSSLIHGMCDIGLVEDAKHLIDEMRKEGFVPNVVCYTA 550
Query: 704 LIGGYCK 711
LIGGYCK
Sbjct: 551 LIGGYCK 557
BLAST of Csa4G055990 vs. NCBI nr
Match:
gi|659102010|ref|XP_008451905.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic isoform X2 [Cucumis melo])
HSP 1 Score: 254.6 bits (649), Expect = 5.1e-64
Identity = 138/507 (27.22%), Postives = 254/507 (50.10%), Query Frame = 1
Query: 203 KGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMEN 262
+G P+LKT L++ L+K F+K + ++ G P+V F N+I+ CK G ++
Sbjct: 154 EGVQPNLKTYGALVNGLIKLKCFDKVNHILDEMIGAGFYPNVVVFNNLIDGYCKMGNIKE 213
Query: 263 AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALIN 322
A+ + M I+P VT ++ G C++ +++ A E++ G+ + ++++
Sbjct: 214 ALRIKDVMISKNITPTSVTLYTLLQGFCKSDQIEQAENALEEILSNGLSIHPDKCYSVVH 273
Query: 323 GLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITP 382
L K + M+ F P+ + L+ G CK G A ++ ++ K
Sbjct: 274 WLCKKFRYHSAFRFTKMMLSRNFRPSDPLLTILVCGLCKDGKHLEATELWFRLLEKGSPA 333
Query: 383 TSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFT 442
+ VT +L+ G C++ + A ++E+L GL + +++ CK+ + FR
Sbjct: 334 SKVTSNALIHGLCEAGNLPEASRIVKEMLERGLPLDRITYNALILGFCKEGKVEGCFRLK 393
Query: 443 KMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGA 502
+ M R +P L+ GLC GK +A +LW G ++ T ++ G C A
Sbjct: 394 EEMTKRGIQPDIYTYNFLLRGLCNAGKLDDAIKLWDEFKASGPISNVHTYGVMMDGYCKA 453
Query: 503 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTY 562
++ + + E+L + + ++ I YN +I C G V +LRE M +GI P+ TY
Sbjct: 454 NRIEDVENLFNELLSKKMELNSIVYNIIIRAHCQNGNVAAALQLRENMKSKGILPNCATY 513
Query: 563 NFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 622
+ L+ G+C++G ++DA L DE + G + N+ Y ++ GYCK +++ E+ + E++S
Sbjct: 514 SSLIHGMCDIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 573
Query: 623 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 682
+ N Y ++I +C+ GN+ A LL MK GI+P+ TY+ L +G C +++
Sbjct: 574 FNIHPNKFTYTVMIDGYCKLGNMEKAYNLLTKMKESGIVPDVVTYNVLTNGFCKANDMDN 633
Query: 683 AKHLIDEMRKEGFVPNVVCYTALIGGY 709
A + D+M EG + + YT L+ G+
Sbjct: 634 AFKVCDQMATEGLSVDEITYTTLVHGW 660
HSP 2 Score: 854.7 bits (2207), Expect = 1.1e-244
Identity = 435/718 (60.58%), Postives = 530/718 (73.82%), Query Frame = 1
Query: 1 MHLTRFKISKTTPVLFPFSRRLVCVS-STQPHKEHHQDPPWQ-------SQDQLHLWVSS 60
M L R ISK T +LF +R L CV+ + Q KE Q PP Q LH WVSS
Sbjct: 5 MDLRRLSISKPT-LLFRINRPLTCVTCNLQRPKEPPQPPPLQVPKEPQPPNQSLHNWVSS 64
Query: 61 VLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSY 120
+LS SLDSSKC AL+P LS +FD++F SI NP T L+FFYFAS SFKF+FT S+
Sbjct: 65 ILSKPSLDSSKCKALIPLLSSQEFDRVFCSISSNVNPKTALHFFYFASESFKFQFTARSF 124
Query: 121 CTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQ 180
C L+ LLI S + PARLLLIRLIDGN+PVL + + H+EIA A+ L +V + Q
Sbjct: 125 CVLVRLLILSNLVSPARLLLIRLIDGNVPVLYANHNQRHMEIAIAMLDLNTVSTQGLGVQ 184
Query: 181 AFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF 240
A DLLIHVY TQF+N+GF A+D F + ++KG FPSLKTCNFLLSSLVKANE K +VF
Sbjct: 185 ALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLKTCNFLLSSLVKANELHKSYDVF 244
Query: 241 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 300
VM G PDV+ FT INA CKGGK+++AI LF KME LGI PNVVTYN II+GLC++
Sbjct: 245 EVMCRGVSPDVYLFTTAINAFCKGGKVDDAIGLFSKMEGLGIVPNVVTYNNIIHGLCKSK 304
Query: 301 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFN 360
RL AF+ K+KM V P+L TY LINGLIKL F N VL EM GF PN VV+N
Sbjct: 305 RLVEAFQFKKKMIENNVGPSLITYSVLINGLIKLEKFHDANCVLKEMCNRGFVPNEVVYN 364
Query: 361 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 420
LIDGYCK GNI ALKI+D M+S +TP SVTL SL+QGFC+SDQ +HAE L++I S
Sbjct: 365 TLIDGYCKTGNISEALKIRDNMLSNGLTPNSVTLNSLLQGFCRSDQFDHAEQVLDKIFSG 424
Query: 421 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA 480
GLSI+ C+SV+HWLC K R+ SA +FT ML RNFRPSD LLT LV GLCKDGKH EA
Sbjct: 425 GLSINQAVCFSVIHWLCMKSRFDSALKFTTEMLLRNFRPSDSLLTTLVGGLCKDGKHSEA 484
Query: 481 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 540
LWFRL EKG A+ TSNALIHGLC + + E ++K MLERGL +DRI+YN LILG
Sbjct: 485 LGLWFRLWEKGVAANTATSNALIHGLCESRSMQEVVMLLKPMLERGLVLDRISYNTLILG 544
Query: 541 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 600
C EGKVE F+L+EEM K+GI+PD YTYN L+ GLCN+GK+DDAIKLWDE + GL+ N
Sbjct: 545 CCKEGKVEEGFKLKEEMAKQGIEPDTYTYNLLMHGLCNMGKVDDAIKLWDECENRGLVPN 604
Query: 601 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 660
++TYG+M++GYC+A R+++ ENLF++L++K++ELNS+VYNI+I+A+C +GN+ AAL L
Sbjct: 605 VYTYGVMIDGYCQAGRMKEGENLFSKLVNKEVELNSVVYNILIRAYCTDGNMTAALGLRC 664
Query: 661 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 711
+MK KGI P+C TYSSLIHG+CNIG VEDAK L+DEMRK+G +PNVVCYTALI GYCK
Sbjct: 665 DMKKKGIQPSCGTYSSLIHGLCNIGNVEDAKCLLDEMRKDGLLPNVVCYTALIHGYCK 721
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP325_ARATH | 5.4e-183 | 49.03 | Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... | [more] |
| PPR91_ARATH | 1.3e-75 | 30.93 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
| PPR12_ARATH | 1.1e-74 | 29.15 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
| PP445_ARATH | 7.1e-74 | 27.09 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... | [more] |
| PPR96_ARATH | 5.1e-72 | 30.54 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L008_CUCSA | 0.0e+00 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055990 PE=4 SV=1 | [more] |
| M5WX26_PRUPE | 7.8e-245 | 60.31 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001463mg PE=4 SV=1 | [more] |
| M5WX26_PRUPE | 1.2e-64 | 28.72 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001463mg PE=4 SV=1 | [more] |
| D7TFE9_VITVI | 6.7e-71 | 28.63 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00360 PE=4 SV=... | [more] |
| A0A067E580_CITSI | 1.3e-74 | 31.81 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003295mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G19440.1 | 3.1e-184 | 49.03 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G62670.1 | 7.3e-77 | 30.93 | rna processing factor 2 | [more] |
| AT1G05670.1 | 6.2e-76 | 29.15 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT5G65560.1 | 4.0e-75 | 27.09 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G62930.1 | 2.9e-73 | 30.54 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
