Csa4G026280 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G026280
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Dihydroneopterin aldolase; contains IPR006156 (Dihydroneopterin aldolase), IPR006157 (Dihydroneopterin aldolase/epimerase domain)
Location	Chr4 : 2804496 .. 2806909 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTTCCGTTCGTCTCCCTTGCCATTCGTTCGTCTTCCTCCTTCCGTTCGTCAGGTGACTCAGCTCAGATTTCCTTCCGTCTTCTGTTCACGCCCATTCTCCGTTGGTCGGCCATTCTTCGTTCGCTTTGTTGTTGTTTGTGGGTATTTTTCGATCTCTTTGCTTTGTTGTCTGTGGGTATTTTTCGATCTCTTTGCTTTGTTTTCTGCGGGTTTTTTAACTTCTTTATTCTTTATTTTTTGAATCTTACAAGTCGCGGTCGTTAATTCCATAAGCTTACTAGTCGTTCGTTTACAAGTTGGCGTTGCTGATTGCTTCTGATTTCATTCGTCGTTCATCTTCTTAAATCTCTATTGGGTTTCCTTCACTCAGGTAAATGGCTGTTTTTTTGTGAGAACTTAAGGTAGAGTTTCTATGTTTCTGTTATGGTGGAATGGATATATTTCTGTGTTTGTGAATGGGGATATTTCTGTTATATTGCTATGCGTATATTTCTGTTATATTGCTTTGTGTATGCTTAGAAACAGAATGAGAATCATGAGACTTAATTTAGTAGTTTTTGTTATGGTGATAAAATAACTACATGAACTTGTTTAATTTTCTTTACCATGGCTATGTGCACATGGACTTGTCTATGTTTGGTTACGGGATTTTATTGTTTAATTTTATTTTCACAGGATGACTTTATTTCCTGTAGACGAGACTTCAAAACAAAGTTGTTCTAGTCTAGTGATAGGAAAAAGGAAAAAAAAAAAAAGACAGGGAAAATTAATCTTCTTGTTGATGCAGTTAGTCAGAATGGCATGCTCGCTAAGTCTAATTGACATTTAAGCAAAAATCCTGGCTAGAACTGCATTACACATCATGCCACATATTATACAAATTTAGTGTGACTTAAGTGTTTACATTGGTCACTCTAATTTAATATACTTTCATGCTACTGATACAGAACTATACGTGCCCATATAATGGTTGGACGATGGTGTGTGGGAAGATGACAAACTTTTCTTTTGAATATTAAACCGACTTTAGGTATTGAAAATTTTAACGGGGGTAGTTGCTTTGATTGTTTTTGGATAATTCGTTCCTTTTTTCTAATTTAGGTTACATTTATATCTTGTTTGTTGAATTCTTATTTAATTTTCTCTTTTTTATGGCTTCATTTCAGTGGTATGGCTGATGATAAAGTTGACATTATTAGGCCCTTAGTAGAAGCAAGTACAAACAGTTTTAAAATAGAAAAGGGGGATAGACTCATATTAAGGGGTCTAAAGTTTCACGGTTATCATGGAGTACATCTCCGAGAAAAGGAAACAGGGCAAACTTTTTTGGTGGATGTGGATGCTTGGTTGGATCTCCGGGCAGCTGGAAAATCTGACAACTTGAGTGATACTGTAAGCTATACAGCAATTTATCGGTAAGTATCTTTATTTAAGGCTCTTTCGTTATGGTTTCTTATGTGATAATCGGATTAATTTCTATTACTAGGTCTGCTATCTGCATCATGGATGTTATTTTTAGTTTTTTAAGTTCCAGTTGATGTTACAATTATTTGATCATTACTCTTTCTTGTTTGTCAATGAAAGCGTACAAAGTACAACAATTATTCGATCATTGTTGTATTCTAGAATTCTGGCTTTTTGAAGTAAAGGTCCAATATTTTCTCTGTTTTACTTGTTCCATTCGACTAAAGTTAGTTTTTTGTCAAAAACAAAAGTGACTTTTGTGAAAACGATTGTACATGATTTGTGAAGACGATTGAGGGATTGGGGGATTTTTGAACGTTTTCTTATCTTTCATGGGTAGTTTGGGTTCTATGTGTTAACATTGCCAATTTAAGGATGTTGAACTGGTTAAGTCATAGATCCTATCATCTACCAACAATTTATGAATTTAAATACTGACCCATGAAAAATATTGTGTTAATGCTTTCTTGGTTATTTGTAGTCAATGTCATGCTTCACTTTTCAAAACAAAAACTTGTCCAATCTAGTGGACAATGAACTTCAACCGATATATTATTATGTGTAGTGTTTCTGAGAGGCTTTTAATATTCGACAGCATAGCAAAAGAAGTTATGACTGGACCATCACATGATCTTCTGGAATCAGCTGCAGAGGAAATTTCTTCAAAAATCATGATTCAGTACGACCGAGTAACTGCAGTTCGAGTAAAAGTTGCTAAGCCCGATGTTGTCGTTGGTGGACCCATTGACTACTTAGGTGTTGAAATTTATAGAAGTAGAGATAGAGATATGCCATTGCCAATTTAACGTGCTTGTTGGTTCAAGCTAATGCTGTACTTGCTTAATGTTTTGAAGAAAGGCTGTGTAAATTGTTATCTGAACTGATTTTTTAAACTGGGTCTTTATTGCTTATAAGAAAATTAGTGAACTTATCATTGATCATTAAGCT

mRNA sequence

ATGGCTGATGATAAAGTTGACATTATTAGGCCCTTAGTAGAAGCAAGTACAAACAGTTTTAAAATAGAAAAGGGGGATAGACTCATATTAAGGGGTCTAAAGTTTCACGGTTATCATGGAGTACATCTCCGAGAAAAGGAAACAGGGCAAACTTTTTTGGTGGATGTGGATGCTTGGTTGGATCTCCGGGCAGCTGGAAAATCTGACAACTTGAGTGATACTGTAAGCTATACAGCAATTTATCGCATAGCAAAAGAAGTTATGACTGGACCATCACATGATCTTCTGGAATCAGCTGCAGAGGAAATTTCTTCAAAAATCATGATTCAGTACGACCGAGTAACTGCAGTTCGAGTAAAAGTTGCTAAGCCCGATGTTGTCGTTGGTGGACCCATTGACTACTTAGGTGTTGAAATTTATAGAAGTAGAGATAGAGATATGCCATTGCCAATTTAA

Coding sequence (CDS)

ATGGCTGATGATAAAGTTGACATTATTAGGCCCTTAGTAGAAGCAAGTACAAACAGTTTTAAAATAGAAAAGGGGGATAGACTCATATTAAGGGGTCTAAAGTTTCACGGTTATCATGGAGTACATCTCCGAGAAAAGGAAACAGGGCAAACTTTTTTGGTGGATGTGGATGCTTGGTTGGATCTCCGGGCAGCTGGAAAATCTGACAACTTGAGTGATACTGTAAGCTATACAGCAATTTATCGCATAGCAAAAGAAGTTATGACTGGACCATCACATGATCTTCTGGAATCAGCTGCAGAGGAAATTTCTTCAAAAATCATGATTCAGTACGACCGAGTAACTGCAGTTCGAGTAAAAGTTGCTAAGCCCGATGTTGTCGTTGGTGGACCCATTGACTACTTAGGTGTTGAAATTTATAGAAGTAGAGATAGAGATATGCCATTGCCAATTTAA

Protein sequence

MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI*

Homology

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BLAST of Csa4G026280 vs. Swiss-Prot
Match: FOLB1_ARATH (Dihydroneopterin aldolase 1 OS=Arabidopsis thaliana GN=FOLB1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.0e-31
Identity = 63/121 (52.07%), Postives = 91/121 (75.21%), Query Frame = 1


Query: 25  GDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIA 84
           GD+LIL+GLKF+G+HG    E+  GQ FLVD+DAW+ L+ AG+SDNL DT+SY  I+ +A
Sbjct: 21  GDKLILKGLKFYGFHGAIAEERTLGQMFLVDIDAWVSLKKAGESDNLEDTISYVDIFSLA 80

Query: 85  KEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDV-VVGGPIDYLGVEIYRSR 144
           KE++ G   +LLE+ AE I+SK + ++ ++ AVRVK++KP+V ++   IDYLGV+I+R R
Sbjct: 81  KEIVEGSPRNLLETVAELIASKTLEKFHQINAVRVKLSKPNVALIKSTIDYLGVDIFRQR 140

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BLAST of Csa4G026280 vs. Swiss-Prot
Match: FOLB2_ARATH (Dihydroneopterin aldolase 2 OS=Arabidopsis thaliana GN=FOLB2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.9e-30
Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 25  GDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIA 84
           GD+LILRGLKF+G+HG    EK  GQ F++D+DAW+ L+ AG SDNL+D+VSY  IY +A
Sbjct: 9   GDKLILRGLKFYGFHGAIPEEKTLGQMFMLDIDAWMCLKKAGLSDNLADSVSYVDIYNVA 68

Query: 85  KEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDV-VVGGPIDYLGVEIYRSR 144
           KEV+ G S +LLE  A  I+SK +    R+TAVRVK+ KP+V ++   IDYLGVEI+R R
Sbjct: 69  KEVVEGSSRNLLERVAGLIASKTLEISPRITAVRVKLWKPNVALIQSTIDYLGVEIFRDR 128

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BLAST of Csa4G026280 vs. Swiss-Prot
Match: FOLB3_ARATH (Probable dihydroneopterin aldolase 3 OS=Arabidopsis thaliana GN=FOLB3 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 54/129 (41.86%), Postives = 88/129 (68.22%), Query Frame = 1


Query: 17  TNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVS 76
           T S +    D+LILRGLKF+G+HGV   E+E G  F+VD++ WL L+ A +SDNL+DTVS
Sbjct: 31  TESLESLPEDKLILRGLKFYGFHGVLPEERELGGLFIVDINLWLSLKKAIESDNLADTVS 90

Query: 77  YTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPD-VVVGGPIDYL 136
           +   +R+ K+++ GP  +L E+ A++I+S+++  + ++  +RVK  KP+  +V   +D+L
Sbjct: 91  FADTFRLVKKIVEGPPRNLYETVADDIASEMLETFPKINVIRVKFGKPNPSLVNSTVDFL 150

Query: 137 GVEIYRSRD 145
           G E++R R+
Sbjct: 151 GAELFRKRN 159

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BLAST of Csa4G026280 vs. Swiss-Prot
Match: FOLB_STAEQ (Dihydroneopterin aldolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=folB PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.8e-20
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1


Query: 26  DRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIAK 85
           D + L G++F+GYHGV   E + GQ F+VD+   +DL  AG+SD++ DTV+Y  +Y+  K
Sbjct: 3   DIIFLNGMRFYGYHGVLAAENDIGQIFVVDITLKVDLSYAGQSDDVKDTVNYGEVYKDVK 62

Query: 86  EVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYRSRD 145
            ++ GP   L+E  AE I+  I   Y+RV   +V++ K +  + G  D +G+EI R  D
Sbjct: 63  SIVEGPRSCLIEHLAERIAKHINSHYNRVMETKVRITKENPPIPGHYDGVGIEIVREND 121

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BLAST of Csa4G026280 vs. Swiss-Prot
Match: FOLB_STAES (Dihydroneopterin aldolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=folB PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.8e-20
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1


Query: 26  DRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIAK 85
           D + L G++F+GYHGV   E + GQ F+VD+   +DL  AG+SD++ DTV+Y  +Y+  K
Sbjct: 3   DIIFLNGMRFYGYHGVLAAENDIGQIFVVDITLKVDLSYAGQSDDVKDTVNYGEVYKDVK 62

Query: 86  EVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYRSRD 145
            ++ GP   L+E  AE I+  I   Y+RV   +V++ K +  + G  D +G+EI R  D
Sbjct: 63  SIVEGPRSCLIEHLAERIAKHINSHYNRVMETKVRITKENPPIPGHYDGVGIEIVREND 121

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BLAST of Csa4G026280 vs. TrEMBL
Match: A0A0A0KU85_CUCSA (7,8-dihydroneopterin aldolase OS=Cucumis sativus GN=Csa_4G026280 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-78
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1


Query: 1   MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL 60
           MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL
Sbjct: 1   MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL 60

Query: 61  DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK 120
           DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK
Sbjct: 61  DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK 120

Query: 121 VAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI 152
           VAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI
Sbjct: 121 VAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI 151

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BLAST of Csa4G026280 vs. TrEMBL
Match: A0A0D2R6L3_GOSRA (7,8-dihydroneopterin aldolase OS=Gossypium raimondii GN=B456_002G153400 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.0e-40
Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 1


Query: 22  IEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIY 81
           I  GD+LILRGLKFHG+HGV   EK+ GQ FLVDVDAW+DLR AGKSDNLSDT+SYT IY
Sbjct: 8   IPTGDKLILRGLKFHGFHGVKPEEKKLGQKFLVDVDAWMDLRKAGKSDNLSDTLSYTDIY 67

Query: 82  RIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYR 141
           RI KEV+ GPSHDLLES A+ I+SK    + +++AVRVKV KP V V G +DYLGVEI R
Sbjct: 68  RIVKEVVEGPSHDLLESVAQMIASKTFTNHSQISAVRVKVGKPHVAVHGCLDYLGVEIMR 127

Query: 142 SRDRDMP 149
            R  D P
Sbjct: 128 YRTIDAP 134

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BLAST of Csa4G026280 vs. TrEMBL
Match: A0A0B0NEP0_GOSAR (7,8-dihydroneopterin aldolase OS=Gossypium arboreum GN=F383_03200 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39
Identity = 85/131 (64.89%), Postives = 100/131 (76.34%), Query Frame = 1


Query: 18  NSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSY 77
           N   I  GD++ILRGLKFHG+HGV   EK+ GQ FLVDVDAW+DLR AG+SDNLSDT+SY
Sbjct: 4   NGNGIPTGDKIILRGLKFHGFHGVKPEEKKLGQKFLVDVDAWMDLRKAGESDNLSDTLSY 63

Query: 78  TAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGV 137
           T IYRI KEV+ GPSHDLLES A+ I+SK    + +++AVRVKV KP V V G +DYLGV
Sbjct: 64  TDIYRIVKEVVEGPSHDLLESVAQMIASKTFTNHSQISAVRVKVGKPHVAVHGCLDYLGV 123

Query: 138 EIYRSRDRDMP 149
           EI R R  D P
Sbjct: 124 EIIRYRTIDAP 134

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BLAST of Csa4G026280 vs. TrEMBL
Match: A0A068V5J2_COFCA (7,8-dihydroneopterin aldolase OS=Coffea canephora GN=GSCOC_T00015853001 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.3e-39
Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 1


Query: 11  PLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDN 70
           P + A T   ++ +GD+L+LRGLKFHGYHGV   E++ GQ FL+DVDAW+DLRAAG SD+
Sbjct: 5   PSICAITEHKELIRGDKLVLRGLKFHGYHGVKQEERKLGQKFLIDVDAWMDLRAAGTSDH 64

Query: 71  LSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGG 130
           LSDT+SYTAIY I KEV+ GP  +LLES A  I+S I+ +Y +++ VRV+V KP V V G
Sbjct: 65  LSDTISYTAIYAIVKEVVEGPPKNLLESVAHLIASTILSRYSQISTVRVQVGKPHVAVHG 124

Query: 131 PIDYLGVEIYRSRDRDM 148
           P+DYLGVEI R R  D+
Sbjct: 125 PVDYLGVEIIRYRSADL 141

[Close]

BLAST of Csa4G026280 vs. TrEMBL
Match: B9III2_POPTR (7,8-dihydroneopterin aldolase OS=Populus trichocarpa GN=POPTR_0016s06750g PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.3e-39
Identity = 81/128 (63.28%), Postives = 99/128 (77.34%), Query Frame = 1


Query: 21  KIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAI 80
           +I  GD+LILRGLKFHG+HGV   E+  GQ FL+DVDAW+DL+AAGKSD LSDT+SYT I
Sbjct: 5   EIRGGDKLILRGLKFHGFHGVKPEERALGQKFLIDVDAWMDLQAAGKSDCLSDTISYTEI 64

Query: 81  YRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIY 140
           YRI KE++ GP  +LLES A+ I+S  +  Y +++AVRVKV KP V V GP+DYLGVEI 
Sbjct: 65  YRIVKEIVEGPPQNLLESVAQLIASTTLSNYPQISAVRVKVGKPHVAVHGPLDYLGVEIL 124

Query: 141 RSRDRDMP 149
           R R  DMP
Sbjct: 125 RHRSSDMP 132

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BLAST of Csa4G026280 vs. TAIR10
Match: AT3G11750.1 (AT3G11750.1 Dihydroneopterin aldolase)

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-32
Identity = 63/121 (52.07%), Postives = 91/121 (75.21%), Query Frame = 1


Query: 25  GDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIA 84
           GD+LIL+GLKF+G+HG    E+  GQ FLVD+DAW+ L+ AG+SDNL DT+SY  I+ +A
Sbjct: 21  GDKLILKGLKFYGFHGAIAEERTLGQMFLVDIDAWVSLKKAGESDNLEDTISYVDIFSLA 80

Query: 85  KEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDV-VVGGPIDYLGVEIYRSR 144
           KE++ G   +LLE+ AE I+SK + ++ ++ AVRVK++KP+V ++   IDYLGV+I+R R
Sbjct: 81  KEIVEGSPRNLLETVAELIASKTLEKFHQINAVRVKLSKPNVALIKSTIDYLGVDIFRQR 140

[Close]

BLAST of Csa4G026280 vs. TAIR10
Match: AT5G62980.1 (AT5G62980.1 Dihydroneopterin aldolase)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-31
Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 25  GDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIYRIA 84
           GD+LILRGLKF+G+HG    EK  GQ F++D+DAW+ L+ AG SDNL+D+VSY  IY +A
Sbjct: 9   GDKLILRGLKFYGFHGAIPEEKTLGQMFMLDIDAWMCLKKAGLSDNLADSVSYVDIYNVA 68

Query: 85  KEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDV-VVGGPIDYLGVEIYRSR 144
           KEV+ G S +LLE  A  I+SK +    R+TAVRVK+ KP+V ++   IDYLGVEI+R R
Sbjct: 69  KEVVEGSSRNLLERVAGLIASKTLEISPRITAVRVKLWKPNVALIQSTIDYLGVEIFRDR 128

[Close]

BLAST of Csa4G026280 vs. TAIR10
Match: AT3G21730.1 (AT3G21730.1 Dihydroneopterin aldolase)

HSP 1 Score: 117.9 bits (294), Expect = 5.6e-27
Identity = 54/129 (41.86%), Postives = 88/129 (68.22%), Query Frame = 1


Query: 17  TNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVS 76
           T S +    D+LILRGLKF+G+HGV   E+E G  F+VD++ WL L+ A +SDNL+DTVS
Sbjct: 31  TESLESLPEDKLILRGLKFYGFHGVLPEERELGGLFIVDINLWLSLKKAIESDNLADTVS 90

Query: 77  YTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPD-VVVGGPIDYL 136
           +   +R+ K+++ GP  +L E+ A++I+S+++  + ++  +RVK  KP+  +V   +D+L
Sbjct: 91  FADTFRLVKKIVEGPPRNLYETVADDIASEMLETFPKINVIRVKFGKPNPSLVNSTVDFL 150

Query: 137 GVEIYRSRD 145
           G E++R R+
Sbjct: 151 GAELFRKRN 159

[Close]

BLAST of Csa4G026280 vs. NCBI nr
Match: gi|449458291|ref|XP_004146881.1| (PREDICTED: dihydroneopterin aldolase 2 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 3.0e-78
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1


Query: 1   MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL 60
           MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL
Sbjct: 1   MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL 60

Query: 61  DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK 120
           DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK
Sbjct: 61  DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK 120

Query: 121 VAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI 152
           VAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI
Sbjct: 121 VAKPDVVVGGPIDYLGVEIYRSRDRDMPLPI 151

[Close]

BLAST of Csa4G026280 vs. NCBI nr
Match: gi|659111322|ref|XP_008455695.1| (PREDICTED: dihydroneopterin aldolase-like [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1


Query: 1   MADDKVDIIRPLVEASTNSFKIEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWL 60
           MADDKVDIIRPLVEASTNSFKIEK DRLILRGLKFHGYHGVHL+EKETGQTFLVDVDAWL
Sbjct: 1   MADDKVDIIRPLVEASTNSFKIEKADRLILRGLKFHGYHGVHLQEKETGQTFLVDVDAWL 60

Query: 61  DLRAAGKSDNLSDTVSYTAIYRIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVK 120
           DLRAAGKSD+LSDTVSYTAIYRIAKEVMTGPSHDLLES AEEISSKIMI YDRVTAVRVK
Sbjct: 61  DLRAAGKSDDLSDTVSYTAIYRIAKEVMTGPSHDLLESTAEEISSKIMIHYDRVTAVRVK 120

Query: 121 VAKPDVVVGGPIDYLGVEIYRSRDRDMPL 150
           VAKPDVVVGGPIDYLGVEI+RSRDRDM +
Sbjct: 121 VAKPDVVVGGPIDYLGVEIFRSRDRDMSI 149

[Close]

BLAST of Csa4G026280 vs. NCBI nr
Match: gi|764607317|ref|XP_011467182.1| (PREDICTED: dihydroneopterin aldolase 2 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40
Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 22  IEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIY 81
           I  GD+L+LRGLKFHG+HGV   EK  GQ FL+DVDAW+DLR AGKSDNLSDT+SYT IY
Sbjct: 10  IRGGDKLVLRGLKFHGFHGVKPEEKTLGQKFLIDVDAWMDLRVAGKSDNLSDTISYTDIY 69

Query: 82  RIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYR 141
           RIAKEV+ GPSH+LLES AE I+S  +  Y R++AV VKV KP V V GP+DYLGVEI+R
Sbjct: 70  RIAKEVVEGPSHNLLESVAELIASTTLKNYPRISAVSVKVGKPHVAVHGPLDYLGVEIFR 129

Query: 142 SRDRD 147
            R  D
Sbjct: 130 YRSID 134

[Close]

BLAST of Csa4G026280 vs. NCBI nr
Match: gi|470135234|ref|XP_004303428.1| (PREDICTED: dihydroneopterin aldolase 2 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40
Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 22  IEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIY 81
           I  GD+L+LRGLKFHG+HGV   EK  GQ FL+DVDAW+DLR AGKSDNLSDT+SYT IY
Sbjct: 12  IRGGDKLVLRGLKFHGFHGVKPEEKTLGQKFLIDVDAWMDLRVAGKSDNLSDTISYTDIY 71

Query: 82  RIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYR 141
           RIAKEV+ GPSH+LLES AE I+S  +  Y R++AV VKV KP V V GP+DYLGVEI+R
Sbjct: 72  RIAKEVVEGPSHNLLESVAELIASTTLKNYPRISAVSVKVGKPHVAVHGPLDYLGVEIFR 131

Query: 142 SRDRD 147
            R  D
Sbjct: 132 YRSID 136

[Close]

BLAST of Csa4G026280 vs. NCBI nr
Match: gi|823134263|ref|XP_012466950.1| (PREDICTED: dihydroneopterin aldolase 2-like [Gossypium raimondii])

HSP 1 Score: 172.2 bits (435), Expect = 7.1e-40
Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 1


Query: 22  IEKGDRLILRGLKFHGYHGVHLREKETGQTFLVDVDAWLDLRAAGKSDNLSDTVSYTAIY 81
           I  GD+LILRGLKFHG+HGV   EK+ GQ FLVDVDAW+DLR AGKSDNLSDT+SYT IY
Sbjct: 8   IPTGDKLILRGLKFHGFHGVKPEEKKLGQKFLVDVDAWMDLRKAGKSDNLSDTLSYTDIY 67

Query: 82  RIAKEVMTGPSHDLLESAAEEISSKIMIQYDRVTAVRVKVAKPDVVVGGPIDYLGVEIYR 141
           RI KEV+ GPSHDLLES A+ I+SK    + +++AVRVKV KP V V G +DYLGVEI R
Sbjct: 68  RIVKEVVEGPSHDLLESVAQMIASKTFTNHSQISAVRVKVGKPHVAVHGCLDYLGVEIMR 127

Query: 142 SRDRDMP 149
            R  D P
Sbjct: 128 YRTIDAP 134

The following BLAST results are available for this feature:

BLAST of Csa4G026280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FOLB1_ARATH	6.0e-31	52.07	Dihydroneopterin aldolase 1 OS=Arabidopsis thaliana GN=FOLB1 PE=1 SV=1	[more]
FOLB2_ARATH	3.9e-30	56.67	Dihydroneopterin aldolase 2 OS=Arabidopsis thaliana GN=FOLB2 PE=1 SV=1	[more]
FOLB3_ARATH	1.0e-25	41.86	Probable dihydroneopterin aldolase 3 OS=Arabidopsis thaliana GN=FOLB3 PE=2 SV=1	[more]
FOLB_STAEQ	4.8e-20	39.50	Dihydroneopterin aldolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP6...	[more]
FOLB_STAES	4.8e-20	39.50	Dihydroneopterin aldolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=f...	[more]

BLAST of Csa4G026280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU85_CUCSA	2.1e-78	100.00	7,8-dihydroneopterin aldolase OS=Cucumis sativus GN=Csa_4G026280 PE=3 SV=1	[more]
A0A0D2R6L3_GOSRA	5.0e-40	67.72	7,8-dihydroneopterin aldolase OS=Gossypium raimondii GN=B456_002G153400 PE=3 SV=...	[more]
A0A0B0NEP0_GOSAR	1.9e-39	64.89	7,8-dihydroneopterin aldolase OS=Gossypium arboreum GN=F383_03200 PE=3 SV=1	[more]
A0A068V5J2_COFCA	9.3e-39	59.12	7,8-dihydroneopterin aldolase OS=Coffea canephora GN=GSCOC_T00015853001 PE=3 SV=...	[more]
B9III2_POPTR	9.3e-39	63.28	7,8-dihydroneopterin aldolase OS=Populus trichocarpa GN=POPTR_0016s06750g PE=3 S...	[more]

BLAST of Csa4G026280 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11750.1	3.4e-32	52.07	Dihydroneopterin aldolase	[more]
AT5G62980.1	2.2e-31	56.67	Dihydroneopterin aldolase	[more]
AT3G21730.1	5.6e-27	41.86	Dihydroneopterin aldolase	[more]

BLAST of Csa4G026280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458291\|ref\|XP_004146881.1\|	3.0e-78	100.00	PREDICTED: dihydroneopterin aldolase 2 [Cucumis sativus]	[more]
gi\|659111322\|ref\|XP_008455695.1\|	1.4e-72	94.63	PREDICTED: dihydroneopterin aldolase-like [Cucumis melo]	[more]
gi\|764607317\|ref\|XP_011467182.1\|	1.9e-40	68.00	PREDICTED: dihydroneopterin aldolase 2 isoform X2 [Fragaria vesca subsp. vesca]	[more]
gi\|470135234\|ref\|XP_004303428.1\|	1.9e-40	68.00	PREDICTED: dihydroneopterin aldolase 2 isoform X1 [Fragaria vesca subsp. vesca]	[more]
gi\|823134263\|ref\|XP_012466950.1\|	7.1e-40	67.72	PREDICTED: dihydroneopterin aldolase 2-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006156	Dihydroneopterin_aldolase
IPR006157	FolB_dom
IPR006156	Dihydroneopterin_aldolase
IPR006157	FolB_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004150	dihydroneopterin aldolase activity
GO:0004150	dihydroneopterin aldolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006760	folic acid-containing compound metabolic process
GO:0006760	folic acid-containing compound metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046656	folic acid biosynthetic process
biological_process	GO:0006760	folic acid-containing compound metabolic process
biological_process	GO:0046654	tetrahydrofolate biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004150	dihydroneopterin aldolase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU091804	cucumber EST collection version 3.0	transcribed_cluster
CU109871	cucumber EST collection version 3.0	transcribed_cluster
CU152166	cucumber EST collection version 3.0	transcribed_cluster
CU170117	cucumber EST collection version 3.0	transcribed_cluster
CU172556	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G026280.2	Csa4G026280.2	mRNA
Csa4G026280.1	Csa4G026280.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU170117	CU170117	transcribed_cluster
CU152166	CU152166	transcribed_cluster
CU109871	CU109871	transcribed_cluster
CU172556	CU172556	transcribed_cluster
CU091804	CU091804	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006156	Dihydroneopterin aldolase	TIGRFAMs	TIGR00525	TIGR00525	coord: 26..140 score: 6.6
IPR006157	Dihydroneopterin aldolase/epimerase domain	PFAM	PF02152	FolB	coord: 29..139 score: 2.9
IPR006157	Dihydroneopterin aldolase/epimerase domain	SMART	SM00905	FolB_2	coord: 28..141 score: 1.9
IPR006157	Dihydroneopterin aldolase/epimerase domain	TIGRFAMs	TIGR00526	TIGR00526	coord: 26..144 score: 1.7
None	No IPR available	GENE3D	G3DSA:3.30.1130.10		coord: 26..143 score: 3.7
None	No IPR available	PANTHER	PTHR20941	FOLATE SYNTHESIS PROTEINS	coord: 22..143 score: 1.7
None	No IPR available	PANTHER	PTHR20941:SF9	SUBFAMILY NOT NAMED	coord: 22..143 score: 1.7
None	No IPR available	unknown	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like	coord: 26..143 score: 1.72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G026280	CSPI04G04440	Wild cucumber (PI 183967)	cpicuB182
Csa4G026280	Cucsa.093790	Cucumber (Gy14) v1	cgycuB102
Csa4G026280	CsGy4G004350	Cucumber (Gy14) v2	cgybcuB165

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G026280	Bottle gourd (USVL1VR-Ls)	culsiB303
Csa4G026280	Melon (DHL92) v3.6.1	cumedB297
Csa4G026280	Silver-seed gourd	carcuB0403
Csa4G026280	Silver-seed gourd	carcuB0886
Csa4G026280	Silver-seed gourd	carcuB0958
Csa4G026280	Silver-seed gourd	carcuB1033
Csa4G026280	Watermelon (97103) v2	cuwmbB266
Csa4G026280	Watermelon (97103) v2	cuwmbB316
Csa4G026280	Wax gourd	cuwgoB376
Csa4G026280	Cucurbita maxima (Rimu)	cmacuB332
Csa4G026280	Cucurbita maxima (Rimu)	cmacuB337
Csa4G026280	Cucurbita maxima (Rimu)	cmacuB710
Csa4G026280	Cucurbita maxima (Rimu)	cmacuB713
Csa4G026280	Cucurbita moschata (Rifu)	cmocuB321
Csa4G026280	Cucurbita moschata (Rifu)	cmocuB325
Csa4G026280	Cucurbita moschata (Rifu)	cmocuB700
Csa4G026280	Cucurbita moschata (Rifu)	cmocuB705
Csa4G026280	Melon (DHL92) v3.5.1	cumeB312
Csa4G026280	Watermelon (Charleston Gray)	cuwcgB319
Csa4G026280	Watermelon (97103) v1	cuwmB312
Csa4G026280	Cucurbita pepo (Zucchini)	cpecuB218
Csa4G026280	Cucurbita pepo (Zucchini)	cpecuB221
Csa4G026280	Cucurbita pepo (Zucchini)	cpecuB401
Csa4G026280	Cucurbita pepo (Zucchini)	cpecuB407