CSPI04G04440 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTGATTTCCCTTCGCGTCTTCCGTTCGTCTCCCTTGCCATTCGTTCGTCAGGTGACTCAGCTCAGATTTCCTTCCGTCTTCTGTTCACGCCCATTCTCCGTTGGTCGGCCATTCTTCGTTCGCTTTGTTGTTGTTTGTGGGTATTTTTCGATCTCTTTGCTTTGTTGTCTGTGGGTATTTTTCGATCTCTTTGCTTTGTTTTCTGCGGGTTTTTTAACTTCTTTATTCTTTATTTTTTGCATCTTACAAGTCGCGGTCGTTAATTCCATAAGCTTACTAGTCGTTCGTTTACAAGTTGGCGTTGCTGATTGCTTCTGATTTCATTCGTCGTTCATCTTCTTAAATCCCTATTGGGTTTCCTTCACTCAGGTAAATGGCTGTTTTTTTGTGAGAAATTAAGGTAGAGTTTCTGTGTTTCTGTTATGGTGGAATGGATACATTTCTGTGTTTGTGAATGGGGATATTTCTGTTATATTGCTATGCGTATATTTCTGTTATATTGCTTTGTGTATGCTTAGAAACAGAATGAGAATCATGAGACTTAATTTAGTAGTTTTTGTTATGGTGATAAAATAACTACATGAACTTGTTTAATTTTCTTTACCATGGCTATGTGCACATGGACTTGTCTATGTTTGGTTACGGGATTTTATTGTTTAATTTTATTTCCACAGGATGACTTTATTTCCTGTAGACGAGACTTCAAAACAAAGTTGTTCTAGTCTAGTGATAGGAAAAAGGAAACGAAAAAAAAAAAACAGGGAAAATTAATCTTCTTGTTGATGCAGTTAGTCAGAATGGCATGCTCGCTAAGTCTAATTGACATTTAAGCAAAAATCCTGGCTAGAACTGCATTACACATCATGCCACATATTATACAAATTTAGTGTGGCTTAAGTGTCTACATTGGTCACTCTAATTTAATATATTTTCATGCTACTGATACAGAACTATACGTGCCCATATAATGGTTGGACGATGGTGTGTGGGAAGATGACAAACTTTTCTTTTGAATATTAAACTGACTTTATAACGGCGGTAGTTGCTTTGATTGTTTTTGGATAATTCGTTCCTTTTTTCTAATTTAGGTTACATTTATATCTTGTTTGTTGAATTCTTATTTAATTTTCTCTTTTTTATGGCTTCATTTCAGTGGTATGGCTGATGATAAAATTGACATTATTAGGCCCTTAGTAGAAGCAAGTACAAACAGTTTTAAAATAGAAAAGGGGGATAGACTCATATTAAGGGGTCTAAAGTTTCACGGTTATCATGGAGTACATCTCCGAGAAAAGGAAACAGGACAAACTTTTTTGGTGGATGTGGATGCTTGGTTGGATCTCCGGGCAGCTGGAAAATCTGACAACTTGAGTGATACTGTAAGCTATACAGCAATTTATCGGTAAGTATCTTTATTTAAGGCTCTTTCGTTATGGTTTCTTATGTGGTAATCGGATTAATTTCTATTACTAGGTCTGCTATCTGCATCATGGATGTTATTTTTAGTTTTTTAAGTTCCAGTTGATGTTACAATTATTTGATCATTACTCTTTCTTGTTTGTCAATGAAAGCGTACAAAGTACAACAATTATTCGATCATTGTTGTATTCTAGAATTCTGGCTTTTTGAAGTAAAGGTCCAATATTTTCTCTGTTTTACTTGTTCCATTCGACTAAAGTTAGTTTTTTGTCAAAAACAAAAGTGACTTTTGTGAAAACGATTGTACATGATTTGTGAAGACGATTGAGGGATTGGGGGATTTTTGAACGTTTTCTTATCTTTCATGGGTAGTTTGGGTTCTATGTGTTAACATTGCCAATTTAAGGATGTTGAACTGGTTAAGTCATAGATCCTATCATCTACCAACAATTTATGAATTTAAATACTGACCCATGAAAAATATTGTGTTAATGCTTTCTTGGTTATTTGTAGTCAATGTCATGCTTCACTTTTCAAAACAAAAACTTGTCCAATCTAGTGGACAATGAACTTCAACCGATATAGTATTATGTGTAGTGTTTCTGAGAGGCTTTTAATATTCGACAGCATAGCAAAAGAAGTTATGACTGGACCATCACATGATCTTCTGGAATCAGCTGCAGAGGAAATTTCTTCAAAAATCATGATTCAGTACGACCGAGTAACTGCAGTTCGAGTAAAAGTTGCTAAGCCCGATGTTGTCGTTGGTGGACCCATTGACTACTTAGGTGTTGAAATTTATAGAAGTAGAGATAGAGATATGCCATTGCCAATTTAACGTGCTTGTTGGTTCAAGCTAATGCTGTACTTGCTTAATGTTTTGAAGAAAGGCTGTGTAAATTGTTATCTGAACTGATTTTTTAAACTGGGTCTTTATTGCTTATAAGAAAATTAGTGAACTTATCATTGATCATTAAGCTCTACATGGG ATGGCTGATGATAAAATTGACATTATTAGGCCCTTAGTAGAAGCAAGTACAAACAGTTTTAAAATAGAAAAGGGGGATAGACTCATATTAAGGGGTCTAAAGTTTCACGGTTATCATGGAGTACATCTCCGAGAAAAGGAAACAGGACAAACTTTTTTGGTGGATGTGGATGCTTGGTTGGATCTCCGGGCAGCTGGAAAATCTGACAACTTGAGTGATACTGTAAGCTATACAGCAATTTATCGCATAGCAAAAGAAGTTATGACTGGACCATCACATGATCTTCTGGAATCAGCTGCAGAGGAAATTTCTTCAAAAATCATGATTCAGTACGACCGAGTAACTGCAGTTCGAGTAAAAGTTGCTAAGCCCGATGTTGTCGTTGGTGGACCCATTGACTACTTAGGTGTTGAAATTTATAGAAGTAGAGATAGAGATATGCCATTGCCAATTTAA ATGGCTGATGATAAAATTGACATTATTAGGCCCTTAGTAGAAGCAAGTACAAACAGTTTTAAAATAGAAAAGGGGGATAGACTCATATTAAGGGGTCTAAAGTTTCACGGTTATCATGGAGTACATCTCCGAGAAAAGGAAACAGGACAAACTTTTTTGGTGGATGTGGATGCTTGGTTGGATCTCCGGGCAGCTGGAAAATCTGACAACTTGAGTGATACTGTAAGCTATACAGCAATTTATCGCATAGCAAAAGAAGTTATGACTGGACCATCACATGATCTTCTGGAATCAGCTGCAGAGGAAATTTCTTCAAAAATCATGATTCAGTACGACCGAGTAACTGCAGTTCGAGTAAAAGTTGCTAAGCCCGATGTTGTCGTTGGTGGACCCATTGACTACTTAGGTGTTGAAATTTATAGAAGTAGAGATAGAGATATGCCATTGCCAATTTAA
BLAST of CSPI04G04440 vs. Swiss-Prot
Match: FOLB1_ARATH (Dihydroneopterin aldolase 1 OS=Arabidopsis thaliana GN=FOLB1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31 Identity = 63/121 (52.07%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of CSPI04G04440 vs. Swiss-Prot
Match: FOLB2_ARATH (Dihydroneopterin aldolase 2 OS=Arabidopsis thaliana GN=FOLB2 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-30 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of CSPI04G04440 vs. Swiss-Prot
Match: FOLB3_ARATH (Probable dihydroneopterin aldolase 3 OS=Arabidopsis thaliana GN=FOLB3 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26 Identity = 54/129 (41.86%), Postives = 90/129 (69.77%), Query Frame = 1
BLAST of CSPI04G04440 vs. Swiss-Prot
Match: FOLB_STAES (Dihydroneopterin aldolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=folB PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20 Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 1
BLAST of CSPI04G04440 vs. Swiss-Prot
Match: FOLB_STAEQ (Dihydroneopterin aldolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=folB PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20 Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 1
BLAST of CSPI04G04440 vs. TrEMBL
Match: A0A0A0KU85_CUCSA (7,8-dihydroneopterin aldolase OS=Cucumis sativus GN=Csa_4G026280 PE=3 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 2.4e-79 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI04G04440 vs. TrEMBL
Match: A0A0D2R6L3_GOSRA (7,8-dihydroneopterin aldolase OS=Gossypium raimondii GN=B456_002G153400 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 7.6e-41 Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 1
BLAST of CSPI04G04440 vs. TrEMBL
Match: A0A0B0NEP0_GOSAR (7,8-dihydroneopterin aldolase OS=Gossypium arboreum GN=F383_03200 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.2e-40 Identity = 85/131 (64.89%), Postives = 100/131 (76.34%), Query Frame = 1
BLAST of CSPI04G04440 vs. TrEMBL
Match: A0A068V5J2_COFCA (7,8-dihydroneopterin aldolase OS=Coffea canephora GN=GSCOC_T00015853001 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.5e-40 Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 1
BLAST of CSPI04G04440 vs. TrEMBL
Match: A0A061EVS6_THECC (7,8-dihydroneopterin aldolase OS=Theobroma cacao GN=TCM_023087 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.4e-40 Identity = 87/138 (63.04%), Postives = 100/138 (72.46%), Query Frame = 1
BLAST of CSPI04G04440 vs. TAIR10
Match: AT3G11750.1 (AT3G11750.1 Dihydroneopterin aldolase) HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33 Identity = 63/121 (52.07%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of CSPI04G04440 vs. TAIR10
Match: AT5G62980.1 (AT5G62980.1 Dihydroneopterin aldolase) HSP 1 Score: 134.4 bits (337), Expect = 5.8e-32 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of CSPI04G04440 vs. TAIR10
Match: AT3G21730.1 (AT3G21730.1 Dihydroneopterin aldolase) HSP 1 Score: 120.6 bits (301), Expect = 8.7e-28 Identity = 54/129 (41.86%), Postives = 90/129 (69.77%), Query Frame = 1
BLAST of CSPI04G04440 vs. NCBI nr
Match: gi|449458291|ref|XP_004146881.1| (PREDICTED: dihydroneopterin aldolase 2 [Cucumis sativus]) HSP 1 Score: 302.8 bits (774), Expect = 3.5e-79 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI04G04440 vs. NCBI nr
Match: gi|659111322|ref|XP_008455695.1| (PREDICTED: dihydroneopterin aldolase-like [Cucumis melo]) HSP 1 Score: 283.9 bits (725), Expect = 1.7e-73 Identity = 140/149 (93.96%), Postives = 145/149 (97.32%), Query Frame = 1
BLAST of CSPI04G04440 vs. NCBI nr
Match: gi|764607317|ref|XP_011467182.1| (PREDICTED: dihydroneopterin aldolase 2 isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-41 Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 1
BLAST of CSPI04G04440 vs. NCBI nr
Match: gi|470135234|ref|XP_004303428.1| (PREDICTED: dihydroneopterin aldolase 2 isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-41 Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 1
BLAST of CSPI04G04440 vs. NCBI nr
Match: gi|823134263|ref|XP_012466950.1| (PREDICTED: dihydroneopterin aldolase 2-like [Gossypium raimondii]) HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40 Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |