Csa4G010970 (gene) Cucumber (Chinese Long) v2

NameCsa4G010970
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 1575780 .. 1575995 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTCAGAATCAACAGTCCAAGCACTCGGAAATGGTATCGGAAGTCGATCGGCAAGAAAATTGGCGACGTGGTTGGTTGTAAATCAGAAAAAAATAGCGGTGGCGGAGTACCGGAAAGAGCCGGGAAGGGAATTTACCGGCTCCTTGCAGGCGTAAAAGCGAGGAGTAGGTACTGGAGAGAGTGGGGAAGGGGAAAATGGAGAAAAAAATAA

mRNA sequence

ATGAGGTTCAGAATCAACAGTCCAAGCACTCGGAAATGGTATCGGAAGTCGATCGGCAAGAAAATTGGCGACGTGGTTGGTTGTAAATCAGAAAAAAATAGCGGTGGCGGAGTACCGGAAAGAGCCGGGAAGGGAATTTACCGGCTCCTTGCAGGCGTAAAAGCGAGGAGTAGGTACTGGAGAGAGTGGGGAAGGGGAAAATGGAGAAAAAAATAA

Coding sequence (CDS)

ATGAGGTTCAGAATCAACAGTCCAAGCACTCGGAAATGGTATCGGAAGTCGATCGGCAAGAAAATTGGCGACGTGGTTGGTTGTAAATCAGAAAAAAATAGCGGTGGCGGAGTACCGGAAAGAGCCGGGAAGGGAATTTACCGGCTCCTTGCAGGCGTAAAAGCGAGGAGTAGGTACTGGAGAGAGTGGGGAAGGGGAAAATGGAGAAAAAAATAA

Protein sequence

MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYWREWGRGKWRKK*
BLAST of Csa4G010970 vs. TrEMBL
Match: A0A0A0KU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010970 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.1e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 1  MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYW 60
          MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYW
Sbjct: 1  MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYW 60

Query: 61 REWGRGKWRKK 72
          REWGRGKWRKK
Sbjct: 61 REWGRGKWRKK 71

BLAST of Csa4G010970 vs. NCBI nr
Match: gi|700197840|gb|KGN52998.1| (hypothetical protein Csa_4G010970 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 7.3e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 1  MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYW 60
          MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYW
Sbjct: 1  MRFRINSPSTRKWYRKSIGKKIGDVVGCKSEKNSGGGVPERAGKGIYRLLAGVKARSRYW 60

Query: 61 REWGRGKWRKK 72
          REWGRGKWRKK
Sbjct: 61 REWGRGKWRKK 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KU19_CUCSA5.1e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010970 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700197840|gb|KGN52998.1|7.3e-35100.00hypothetical protein Csa_4G010970 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU134016cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G010970.1Csa4G010970.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU134016CU134016transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G010970CSPI04G02650Wild cucumber (PI 183967)cpicuB182
Csa4G010970CsGy4G002520Cucumber (Gy14) v2cgybcuB165
The following gene(s) are paralogous to this gene:

None