Csa3G872710 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAACGGTAGCGTTTCTAGTTTGTCGAGCTGTTCTTGATCGGAAATCGAGGTGTCTCTGCAGCAAAGAAGTAGTGGTGTGAATTTCTTGAGACGAATCAGGAGTTCATTCTTGTTTCAGTTGAATTTGACGGTGGTTCTCCAGATCGATCGACGGCGATAAACCTAATAGCTCCGTTGTTCTGCTTCTACGGCCATGTCCTCCGACACTGTTCCTCCTATCATTGCTGCTCATATTAATTACCTGCTCAACCACTTTCCCCTCCCCGTTAAGGTAACATTTCGAATTCCTATCTCTTCCTCGAGAATTTAGCGATTACAAAGTTCATTTCGATTTCTAGATTTTCTAGCTTTTGAAATTGATGGTGACTGTTTGTAGTGATTTGGAATTAGATCAGTTCACTGAATTGATCGGAAATGGATTGTATTTAATGTCATTTTCATATGGCAATGGAAAGCAAACGGATTATTGTGTTGAACGGATCACTTATTCTTACTTTTTCGGTATATTCAGATTGAGCACATGTGGTCTGGCAGTAGACACTACCCTGGAATCATGGATAGGTTCACCTTAGTCATGCCTTACTGCCTTGAATTCGTCAAATGTAAGACCTGTTTTCCGTTTTTGTTATCATGATGTGCTTTCAATTCCCTTCCCTTTCCCTGTACCGAATGGTTGATAGATTTGCTATAGCTAGCTGTTTGGTTGCTGCTACATGTTGTAGGGGACATCATGTACAATGCTGAATCACCGTTTTCTGCTCCTGATATTGTGTTTGGACCAGAAGATGAAAATTTCCATCCATTCAGTAGCAAGGTTGATGAAGGAGAAGGAGATCATAATTCATTACATAACAGTCTACGTGACTGGAACAGCAAAGATCCATCTCGGCTCACTAGCCTCCTTCAAGAACTGAGGTTTTTGAAGGCTTTCCTTTGATAATTCTTTCTTTTCTAATGCCTTTTACTATAACTCTTTTTGAATTTGAGGGCAAATTTACTTTCTTCAAGGGATCGATATGTGTCATACCAAAGGAAACGTGTTGAAGGTGTTGATGATGAAAGATTGAAGTTTGAACTTTGTACTATGTTATCGAGGGAGGTAATGTTCTTCATTATAACATTTGATAGGCTCCTAACTGTGTATTGGTGATCAATCACATGAGTTTATGAATTTGAGGGGCGAGGTTTTGGGCTCAGTTTCTTGATAATAATGTTCTTGGTGGTTGTCTATTGAGACGTGTAAAACTATATATTTTCATCCTTGGAAATTAGAACTTGAATGAGACAGTTGTTGCTGGATCTTTTACGCATGAAAAATAATAGTAAAGAAGGTTAACCATCTTTCTTTTCTTTTATAACTATGTGTATGTGTAGTTAGCCAGGCTGCTCTTTATACAGTTATCTGTTGTCGTGCCTTAAGAATTCTTTGATTTTCAACGGTTAAATAAAACCAAAAGTAACTCATTGTACCTTTCTGCAGGGAATTGAAATGCATTTGAGTTCAGGTGTTGAGAAGGTAATAGTTTAAAGTATACGGTTATACTTTCCTTGAAATAGTTGAATACTAAGGTCTCTATTCTCTCTCTCTTTATTCTCATACATGTGGCTTCTATGCCTTTGAACTTTAGCATAGCCAGAGGAGGTCAAATTTGCAGTGCCGCTGGTAGACATTAATATTAATAAGATGATACCTGGATGCCCATGGAGGCATCCACAGAAGATATTCTTGCAGGTTGCCTTGTACTTTTCTGTCTTCGAACTTCTGGTCTTCCCTCTCCTTTATTTTTCCCATTCTCACACATCATGTTTTCATAGGTTTTATATCCTGTGGTGAGAAAATATGCAACTACTCCTTCTGCACCACGTCTGAAGTTGGTTTCTACCTCTGAGTTGAAGGCTCTGTTATCCATCGAGGACATCAAACTTCCTACCTGGATAGATGGAATGTATTACTCTCTCTCTCTCTCTCTCTCTCTCATATGTCCTTTCTATTTCTGTGGCTCTCAGTATTGGATACTAAAAGTGATTTTTTTGTAACTGGCTTCAAGGTGCATGGCTGAATATCTTCCCCATCTAGAAGAGAGTCTTGAGAAACAGGTTGGTTACATATTTTTTGTCTGATGGCTATTTTGGATTGATTAACTATGATTTTAATTTTGGAAGTTGCCTAAAGTAGAGCATTTGTACTTCTATCATTCTGATGAAGGTTCTGGAGGCTGTTTCATTGATTGATGTCAGGAGAGGCTTTATAGAGGCATTGAACTCTTTCTTTGGAAGGCCTTTGGAAGCTGACCCGGTAGGATTCTTACAAAACTTTTGTTTATCTTATTGTTCTTTTTAAAGTTGTTACTTAAATCTTAGCTTAAGTGTGAATGGGTGGGGAGAGGGGTCATCAAATCTTACTAATGGCATGAATTTCTTTGTTTTTTAGGTGTTTTGTCGAACAGCTACAGTTATCACTGCCTCCGGGGTGTTCACATTCCTGGTATTAAGTGACTTTCTCTATCCTTAATATGGCATCCCATCACTATCACAAATCATGTTATATGGAAAATTTTCCAATTATTTACTATGAAAAATAATATTATTCACGTAATGGGTGGTTAACTCTGGTGAGTGCTTTTGGTAGGTTTATTTTAACTCTTCACCAGAATTTCTCCTTCTTGAATTCTTATCAAAATCTTCCCTATTTAGGATCTATACCTCGGTCTGTAGAGAATCAGATGTTATAATATTAACTTTGGAGATGATCACCACCTTGTATCTGGTACGTACAATTTCCACATCCATTGATCACAAAGATAGCCATCAGGCCTCAATTTTTTCATTTTTTGAAGAGATTTCATCAATGAAATCGTTTGTTATCCAAAAAGAAAAGAAATTTCCGAAACAAAATATCCCTCAACAACAAAAACAATACAGTGGTTTAGAGTTTTATAGAGCCTCTAAAGAGAGGCATTGAAGAAAGCAACACTCACTCTAAACTTCCCCTTTCGAGACCTTTCTACACTCTTGAAGGTTCAATTGTTTGCAGTTTGCTATCTCTCTCTAATCTGATGATCCTATTAATAAGGAAGAACACTGTCTGCAGTCTGCTAGAGAGGCTTTCAAGCTCTGACATCTACCAATATCCTGTACTTGGGTTATTCACTAATCACTGAGACTTCTCCCTAAATCTTCCCCACAAAGTGGCATCTCCATGAATCATTATTTAATTCTTCCAATGCCCTTCTGTGTAAAATACACTACCTAGACCCCGAACCATAGGTGAACCTCATTTTTTATTATGTTGACTGAAGACTTCATTGTTTAAGATGAAGAAATGGGTTCTCTCGTTGAATTGGGTGATAGCCAAGACATTTTACAACTATTTATCCTTTCATATTGTTTCTCTTTTCTGTCAAGTTCCTTCACGACATTTTCTTGACATGATTTCACACAAATTTATCCTTTGCTATCACACATGCACAATAATTTACAGGAAACAGAACATATGCTGGACGCAAATCTCTTGTTGGTGACTGGTTTATTACACGCTCACACATGCACACATGCACACATGCACAAAGCATTCTCAATCAGTGGTAAATGACATTTGTTCCATGAAAATCCTTTAGGTTTTAACTTCGACTAAGGTAGTGTGTCCGATAAGATAGGTTAAGAAACACTGTTCATGTTCTTTGATCAACATGGTTGAATGTGGACTTGGTAAAACGTGTTAGCAAGCAATTATCACCAACTTCTGTTAAATGTTTTGCATCTTTTTAAACGATGTATATATGGAAATGTTTATTTTCTGCATTTTCCTTATGTTTGTGGAAATTTCTTGTTAATGCTAGGTCCACATCCTCATTTCAACCCAATTTCCAAAGAAACAGCCTTCTCTGGTGCTGCAAAGTTCTCAGGTAATGTAATTTTTCCGTGAATCTTGAAAACTCTTGTGTATATCGGCTTTGGTTTGTAGTTAAATATGACTAATGCCATAAACATGCTTGTACGTTTCTCTCCATTGGTTGTCCAAACTCCACATAGTTTTGGCGGAATTCACACAGACTTTGTTCTCATTTACATTTTTCTATTTGACAAGGAATCTTTGGTGAATTAAATTGTATAAGGTTGCATCTAGAGATGATCAAATGACATGATAGGTGTTGCAATAGGTGTAACTCTAGTTTCCAAGGATTTTTCTGTTCATTCTGAATACGAATGGCATTGTTGTTGAGATTGCCTCATGTTTATTAATATATTTGATGGGCCAACTTGTTTATTATTAATATCCACTCTTTCTATATTTTTTAGCATTTCAACTCTCAAGGTGCACCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGATGGGAGCCATTGCAAATGGCTGAGCGGATTTTGTAAGTCATCTTTCCCTCTCGTTATTTTCATTTGCATATACATTCACTAATCAATCACGGATTCAATTCAATATTAACAGTGAGTTTCTTGCTGATGAGGCGTTGAGTTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGCTGATGGTTCTATGAAAACTCTGGTCAACGTGAGTCAATATTCCCACCATATGTCAGTACAGTTTATTATGTATAGTAGTAGCTGTTAGAGTAGAGTAGTAGTATTCCTAATTTTTGGTCCTTAGATTGATTTTGCCATCCCCTTTGGGGTTTGTCTGCCTAGTGCTTCCTCGATTAAGATTGCTCCAAGGTAAATGATCAAGAACTGATGTGAGTTTCAATTTTAAGGATCGTTGTATTTGGTAAAGGATTCAAATCCAGAAACACTGGACGATCCTCAACAGGGCTGGGCATTGATCTTCTTGAACGACCATGATTTGGCATGGCATTTTGTTTTGTCATATTTTATAGAGCCCAGTAACGAACGATTGAATTGTTGAACCTAAAATCACCTCTCCAATTCATTGCTTCTTGCTTGAGACTTGGAGTTTTGATTAGGTCATGTTTGTTTACCTGAACCAAATAATCCACTAACTTTTTCATATACTTTTGAACTATCACTATAGTTTCTTTTATACATATATATACATCTTGC ATGTCCTCCGACACTGTTCCTCCTATCATTGCTGCTCATATTAATTACCTGCTCAACCACTTTCCCCTCCCCGTTAAGATTGAGCACATGTGGTCTGGCAGTAGACACTACCCTGGAATCATGGATAGGTTCACCTTAGTCATGCCTTACTGCCTTGAATTCGTCAAATGGGACATCATGTACAATGCTGAATCACCGTTTTCTGCTCCTGATATTGTGTTTGGACCAGAAGATGAAAATTTCCATCCATTCAGTAGCAAGGTTGATGAAGGAGAAGGAGATCATAATTCATTACATAACAGTCTACGTGACTGGAACAGCAAAGATCCATCTCGGCTCACTAGCCTCCTTCAAGAACTGAGGGATCGATATGTGTCATACCAAAGGAAACGTGTTGAAGGTGTTGATGATGAAAGATTGAAGTTTGAACTTTGTACTATGTTATCGAGGGAGGGAATTGAAATGCATTTGAGTTCAGGTGTTGAGAAGCCAGAGGAGGTCAAATTTGCAGTGCCGCTGGTAGACATTAATATTAATAAGATGATACCTGGATGCCCATGGAGGCATCCACAGAAGATATTCTTGCAGGTTTTATATCCTGTGGTGAGAAAATATGCAACTACTCCTTCTGCACCACGTCTGAAGTTGGTTTCTACCTCTGAGTTGAAGGCTCTGTTATCCATCGAGGACATCAAACTTCCTACCTGGATAGATGGAATGTGCATGGCTGAATATCTTCCCCATCTAGAAGAGAGTCTTGAGAAACAGGTTCTGGAGGCTGTTTCATTGATTGATGTCAGGAGAGGCTTTATAGAGGCATTGAACTCTTTCTTTGGAAGGCCTTTGGAAGCTGACCCGGTGTTTTGTCGAACAGCTACAGTTATCACTGCCTCCGGGGTGTTCACATTCCTGGTCCACATCCTCATTTCAACCCAATTTCCAAAGAAACAGCCTTCTCTGGTGCTGCAAAGTTCTCAGCATTTCAACTCTCAAGGTGCACCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGATGGGAGCCATTGCAAATGGCTGAGCGGATTTTTGAGTTTCTTGCTGATGAGGCGTTGAGTTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGCTGA ATGTCCTCCGACACTGTTCCTCCTATCATTGCTGCTCATATTAATTACCTGCTCAACCACTTTCCCCTCCCCGTTAAGATTGAGCACATGTGGTCTGGCAGTAGACACTACCCTGGAATCATGGATAGGTTCACCTTAGTCATGCCTTACTGCCTTGAATTCGTCAAATGGGACATCATGTACAATGCTGAATCACCGTTTTCTGCTCCTGATATTGTGTTTGGACCAGAAGATGAAAATTTCCATCCATTCAGTAGCAAGGTTGATGAAGGAGAAGGAGATCATAATTCATTACATAACAGTCTACGTGACTGGAACAGCAAAGATCCATCTCGGCTCACTAGCCTCCTTCAAGAACTGAGGGATCGATATGTGTCATACCAAAGGAAACGTGTTGAAGGTGTTGATGATGAAAGATTGAAGTTTGAACTTTGTACTATGTTATCGAGGGAGGGAATTGAAATGCATTTGAGTTCAGGTGTTGAGAAGCCAGAGGAGGTCAAATTTGCAGTGCCGCTGGTAGACATTAATATTAATAAGATGATACCTGGATGCCCATGGAGGCATCCACAGAAGATATTCTTGCAGGTTTTATATCCTGTGGTGAGAAAATATGCAACTACTCCTTCTGCACCACGTCTGAAGTTGGTTTCTACCTCTGAGTTGAAGGCTCTGTTATCCATCGAGGACATCAAACTTCCTACCTGGATAGATGGAATGTGCATGGCTGAATATCTTCCCCATCTAGAAGAGAGTCTTGAGAAACAGGTTCTGGAGGCTGTTTCATTGATTGATGTCAGGAGAGGCTTTATAGAGGCATTGAACTCTTTCTTTGGAAGGCCTTTGGAAGCTGACCCGGTGTTTTGTCGAACAGCTACAGTTATCACTGCCTCCGGGGTGTTCACATTCCTGGTCCACATCCTCATTTCAACCCAATTTCCAAAGAAACAGCCTTCTCTGGTGCTGCAAAGTTCTCAGCATTTCAACTCTCAAGGTGCACCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGATGGGAGCCATTGCAAATGGCTGAGCGGATTTTTGAGTTTCTTGCTGATGAGGCGTTGAGTTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGCTGA MSSDTVPPIIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIMYNAESPFSAPDIVFGPEDENFHPFSSKVDEGEGDHNSLHNSLRDWNSKDPSRLTSLLQELRDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININKMIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPTWIDGMCMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALNSFFGRPLEADPVFCRTATVITASGVFTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRYCNEAQLQC*
BLAST of Csa3G872710 vs. Swiss-Prot
Match: BRE_DANRE (BRCA1-A complex subunit BRE OS=Danio rerio GN=bre PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.9e-27 Identity = 101/332 (30.42%), Postives = 153/332 (46.08%), Query Frame = 1
BLAST of Csa3G872710 vs. Swiss-Prot
Match: BRE_MESAU (BRCA1-A complex subunit BRE OS=Mesocricetus auratus GN=Bre PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.0e-26 Identity = 103/325 (31.69%), Postives = 152/325 (46.77%), Query Frame = 1
BLAST of Csa3G872710 vs. Swiss-Prot
Match: BRE_BOVIN (BRCA1-A complex subunit BRE OS=Bos taurus GN=BRE PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.9e-26 Identity = 102/325 (31.38%), Postives = 152/325 (46.77%), Query Frame = 1
BLAST of Csa3G872710 vs. Swiss-Prot
Match: BRE_RAT (BRCA1-A complex subunit BRE OS=Rattus norvegicus GN=Bre PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 5.0e-26 Identity = 102/325 (31.38%), Postives = 152/325 (46.77%), Query Frame = 1
BLAST of Csa3G872710 vs. Swiss-Prot
Match: BRE_XENTR (BRCA1-A complex subunit BRE OS=Xenopus tropicalis GN=bre PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 6.6e-26 Identity = 103/327 (31.50%), Postives = 148/327 (45.26%), Query Frame = 1
BLAST of Csa3G872710 vs. TrEMBL
Match: A0A0A0LDL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872710 PE=4 SV=1) HSP 1 Score: 779.6 bits (2012), Expect = 1.7e-222 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 1
BLAST of Csa3G872710 vs. TrEMBL
Match: W9RNI6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016058 PE=4 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 1.8e-163 Identity = 280/379 (73.88%), Postives = 326/379 (86.02%), Query Frame = 1
BLAST of Csa3G872710 vs. TrEMBL
Match: M5XY87_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006820mg PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 3.0e-163 Identity = 272/379 (71.77%), Postives = 330/379 (87.07%), Query Frame = 1
BLAST of Csa3G872710 vs. TrEMBL
Match: A0A059BPN6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01664 PE=4 SV=1) HSP 1 Score: 570.1 bits (1468), Expect = 2.0e-159 Identity = 260/379 (68.60%), Postives = 320/379 (84.43%), Query Frame = 1
BLAST of Csa3G872710 vs. TrEMBL
Match: A0A067KLA8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08208 PE=4 SV=1) HSP 1 Score: 565.5 bits (1456), Expect = 5.0e-158 Identity = 258/379 (68.07%), Postives = 323/379 (85.22%), Query Frame = 1
BLAST of Csa3G872710 vs. TAIR10
Match: AT5G42470.1 (AT5G42470.1 Brain/reproductive organ-expressed protein (InterPro:IPR010358)) HSP 1 Score: 491.5 bits (1264), Expect = 4.7e-139 Identity = 229/381 (60.10%), Postives = 299/381 (78.48%), Query Frame = 1
BLAST of Csa3G872710 vs. NCBI nr
Match: gi|449437198|ref|XP_004136379.1| (PREDICTED: BRCA1-A complex subunit BRE [Cucumis sativus]) HSP 1 Score: 779.6 bits (2012), Expect = 2.4e-222 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 1
BLAST of Csa3G872710 vs. NCBI nr
Match: gi|659132969|ref|XP_008466484.1| (PREDICTED: BRCA1-A complex subunit BRE [Cucumis melo]) HSP 1 Score: 765.4 bits (1975), Expect = 4.8e-218 Identity = 372/379 (98.15%), Postives = 378/379 (99.74%), Query Frame = 1
BLAST of Csa3G872710 vs. NCBI nr
Match: gi|703129832|ref|XP_010104459.1| (hypothetical protein L484_016058 [Morus notabilis]) HSP 1 Score: 583.6 bits (1503), Expect = 2.6e-163 Identity = 280/379 (73.88%), Postives = 326/379 (86.02%), Query Frame = 1
BLAST of Csa3G872710 vs. NCBI nr
Match: gi|596166419|ref|XP_007223011.1| (hypothetical protein PRUPE_ppa006820mg [Prunus persica]) HSP 1 Score: 582.8 bits (1501), Expect = 4.4e-163 Identity = 272/379 (71.77%), Postives = 330/379 (87.07%), Query Frame = 1
BLAST of Csa3G872710 vs. NCBI nr
Match: gi|645228996|ref|XP_008221255.1| (PREDICTED: BRCA1-A complex subunit BRE [Prunus mume]) HSP 1 Score: 582.0 bits (1499), Expect = 7.5e-163 Identity = 272/379 (71.77%), Postives = 330/379 (87.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |